Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692620 | XP_013458674.1 | 99.504 | 605 | 3 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1245 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692620 | sp|Q9FIK1|Y5780_ARATH | 64.669 | 484 | 168 | 2 | 1 | 482 | 1 | 483 | 0.0 | 675 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692620 | G7ZZV4 | 99.504 | 605 | 3 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1245 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007080 | Msa0692620 | 0.808954 | 2.402597e-50 | -8.615850e-47 |
Msa0692620 | Msa0719490 | -0.805272 | 1.446488e-49 | -8.615850e-47 |
Msa0692620 | Msa0782970 | 0.809800 | 1.581917e-50 | -8.615850e-47 |
Msa0692620 | Msa0880080 | 0.805108 | 1.565009e-49 | -8.615850e-47 |
Msa0692620 | Msa0921630 | 0.814396 | 1.573583e-51 | -8.615850e-47 |
Msa0692620 | Msa1000020 | 0.805452 | 1.326089e-49 | -8.615850e-47 |
Msa0692620 | Msa1009000 | 0.808282 | 3.344295e-50 | -8.615850e-47 |
Msa0692620 | Msa1036390 | 0.813331 | 2.701948e-51 | -8.615850e-47 |
Msa0692620 | Msa1069310 | 0.807455 | 5.011628e-50 | -8.615850e-47 |
Msa0692620 | Msa1076680 | 0.802675 | 5.013612e-49 | -8.615850e-47 |
Msa0692620 | Msa1083410 | 0.827487 | 1.522553e-54 | -8.615850e-47 |
Msa0692620 | Msa1098560 | 0.814323 | 1.633173e-51 | -8.615850e-47 |
Msa0692620 | Msa1125040 | 0.809383 | 1.944024e-50 | -8.615850e-47 |
Msa0692620 | Msa1242230 | 0.804023 | 2.635323e-49 | -8.615850e-47 |
Msa0692620 | Msa1242240 | 0.808372 | 3.199221e-50 | -8.615850e-47 |
Msa0692620 | Msa1267200 | 0.915548 | 5.162468e-85 | -8.615850e-47 |
Msa0692620 | Msa1271300 | 0.808764 | 2.637913e-50 | -8.615850e-47 |
Msa0692620 | Msa1322890 | 0.804061 | 2.587685e-49 | -8.615850e-47 |
Msa0692620 | Msa1335770 | 0.809499 | 1.836257e-50 | -8.615850e-47 |
Msa0692620 | Msa1411070 | 0.805411 | 1.352482e-49 | -8.615850e-47 |
Msa0692620 | Msa1414740 | 0.813365 | 2.655473e-51 | -8.615850e-47 |
Msa0692620 | Msa1423080 | 0.810193 | 1.301840e-50 | -8.615850e-47 |
Msa0692620 | Msa1466810 | 0.802976 | 4.344047e-49 | -8.615850e-47 |
Msa0124110 | Msa0692620 | 0.809508 | 1.827674e-50 | -8.615850e-47 |
Msa0142240 | Msa0692620 | 0.954592 | 2.091896e-112 | -8.615850e-47 |
Msa0165430 | Msa0692620 | 0.813952 | 1.972213e-51 | -8.615850e-47 |
Msa0201330 | Msa0692620 | 0.816535 | 5.260871e-52 | -8.615850e-47 |
Msa0416800 | Msa0692620 | 0.818749 | 1.666060e-52 | -8.615850e-47 |
Msa0463460 | Msa0692620 | 0.846447 | 2.159709e-59 | -8.615850e-47 |
Msa0243910 | Msa0692620 | 0.802997 | 4.301706e-49 | -8.615850e-47 |
Msa0243930 | Msa0692620 | 0.806155 | 9.434860e-50 | -8.615850e-47 |
Msa0282590 | Msa0692620 | 0.817497 | 3.197633e-52 | -8.615850e-47 |
Msa0509020 | Msa0692620 | 0.834794 | 2.438872e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692620 | MtrunA17_Chr4g0076521 | 99.504 | 605 | 3 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1245 |
Msa0692620 | MtrunA17_Chr2g0290741 | 67.276 | 602 | 164 | 6 | 1 | 600 | 1 | 571 | 0.0 | 811 |
Msa0692620 | MtrunA17_Chr8g0367891 | 46.535 | 505 | 223 | 6 | 1 | 477 | 1 | 486 | 1.49e-144 | 431 |
Msa0692620 | MtrunA17_Chr5g0412591 | 44.828 | 522 | 212 | 7 | 1 | 477 | 1 | 491 | 2.09e-139 | 418 |
Msa0692620 | MtrunA17_Chr5g0401341 | 42.771 | 498 | 249 | 8 | 1 | 476 | 1 | 484 | 2.46e-133 | 404 |
Msa0692620 | MtrunA17_Chr1g0150191 | 41.212 | 495 | 260 | 7 | 1 | 473 | 1 | 486 | 4.61e-131 | 397 |
Msa0692620 | MtrunA17_Chr1g0207461 | 39.279 | 499 | 264 | 7 | 1 | 473 | 1 | 486 | 1.10e-121 | 373 |
Msa0692620 | MtrunA17_Chr4g0050021 | 37.266 | 534 | 277 | 9 | 5 | 484 | 23 | 552 | 1.07e-112 | 351 |
Msa0692620 | MtrunA17_Chr2g0279481 | 36.535 | 531 | 280 | 7 | 5 | 479 | 23 | 552 | 6.60e-108 | 339 |
Msa0692620 | MtrunA17_Chr2g0303541 | 36.508 | 504 | 286 | 10 | 1 | 473 | 1 | 501 | 1.43e-100 | 319 |
Msa0692620 | MtrunA17_Chr2g0285511 | 35.341 | 498 | 295 | 6 | 1 | 473 | 1 | 496 | 6.09e-98 | 311 |
Msa0692620 | MtrunA17_Chr5g0401451 | 35.269 | 465 | 283 | 7 | 22 | 475 | 36 | 493 | 2.82e-93 | 300 |
Msa0692620 | MtrunA17_Chr4g0010091 | 35.974 | 467 | 275 | 6 | 25 | 475 | 33 | 491 | 2.75e-91 | 294 |
Msa0692620 | MtrunA17_Chr8g0382231 | 34.979 | 486 | 268 | 8 | 19 | 475 | 45 | 511 | 3.16e-91 | 294 |
Msa0692620 | MtrunA17_Chr4g0053841 | 36.364 | 462 | 279 | 7 | 23 | 475 | 10 | 465 | 2.00e-90 | 291 |
Msa0692620 | MtrunA17_Chr2g0320691 | 35.504 | 476 | 279 | 9 | 24 | 473 | 21 | 494 | 1.35e-87 | 285 |
Msa0692620 | MtrunA17_Chr8g0374011 | 33.068 | 502 | 279 | 8 | 23 | 473 | 17 | 512 | 5.05e-87 | 284 |
Msa0692620 | MtrunA17_Chr1g0181181 | 32.460 | 496 | 293 | 9 | 1 | 473 | 1 | 477 | 1.05e-86 | 280 |
Msa0692620 | MtrunA17_Chr3g0108331 | 32.391 | 460 | 288 | 5 | 21 | 475 | 19 | 460 | 1.16e-84 | 275 |
Msa0692620 | MtrunA17_Chr7g0268781 | 33.155 | 561 | 309 | 13 | 17 | 532 | 27 | 566 | 1.01e-79 | 264 |
Msa0692620 | MtrunA17_Chr5g0432861 | 31.723 | 476 | 295 | 4 | 22 | 484 | 21 | 479 | 9.21e-78 | 257 |
Msa0692620 | MtrunA17_Chr1g0195911 | 32.014 | 556 | 319 | 12 | 17 | 532 | 27 | 563 | 9.48e-78 | 258 |
Msa0692620 | MtrunA17_Chr7g0245201 | 32.632 | 475 | 297 | 10 | 14 | 473 | 49 | 515 | 1.29e-74 | 250 |
Msa0692620 | MtrunA17_Chr1g0199631 | 32.898 | 459 | 273 | 7 | 44 | 475 | 8 | 458 | 3.52e-74 | 248 |
Msa0692620 | MtrunA17_Chr1g0191711 | 31.347 | 453 | 271 | 9 | 28 | 473 | 60 | 479 | 2.58e-72 | 242 |
Msa0692620 | MtrunA17_Chr4g0003891 | 36.207 | 290 | 168 | 5 | 201 | 485 | 46 | 323 | 6.51e-50 | 179 |
Msa0692620 | MtrunA17_Chr2g0332281 | 36.364 | 297 | 176 | 4 | 183 | 475 | 6 | 293 | 2.17e-49 | 177 |
Msa0692620 | MtrunA17_Chr4g0023801 | 30.394 | 431 | 257 | 14 | 60 | 475 | 40 | 442 | 7.88e-43 | 161 |
Msa0692620 | MtrunA17_Chr4g0037661 | 25.971 | 489 | 302 | 12 | 29 | 480 | 6 | 471 | 3.87e-37 | 145 |
Msa0692620 | MtrunA17_Chr4g0041491 | 88.571 | 70 | 8 | 0 | 1 | 70 | 1 | 70 | 4.86e-37 | 132 |
Msa0692620 | MtrunA17_Chr1g0163311 | 26.087 | 483 | 290 | 12 | 29 | 474 | 6 | 458 | 9.92e-33 | 132 |
Msa0692620 | MtrunA17_Chr2g0280541 | 25.798 | 376 | 240 | 12 | 100 | 461 | 8 | 358 | 1.06e-25 | 110 |
Msa0692620 | MtrunA17_Chr1g0206621 | 36.765 | 136 | 84 | 1 | 33 | 166 | 75 | 210 | 1.32e-21 | 94.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0692620 | AT5G47800.3 | 64.669 | 484 | 168 | 2 | 1 | 482 | 1 | 483 | 0.0 | 675 |
Msa0692620 | AT5G47800.1 | 64.669 | 484 | 168 | 2 | 1 | 482 | 1 | 483 | 0.0 | 675 |
Msa0692620 | AT5G47800.4 | 64.669 | 484 | 168 | 2 | 1 | 482 | 1 | 483 | 0.0 | 675 |
Msa0692620 | AT5G47800.2 | 64.669 | 484 | 168 | 2 | 1 | 482 | 114 | 596 | 0.0 | 672 |
Msa0692620 | AT1G67900.5 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.27e-151 | 449 |
Msa0692620 | AT1G67900.1 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.27e-151 | 449 |
Msa0692620 | AT1G67900.3 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.27e-151 | 449 |
Msa0692620 | AT1G67900.6 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.27e-151 | 449 |
Msa0692620 | AT1G67900.2 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.27e-151 | 449 |
Msa0692620 | AT1G67900.4 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.27e-151 | 449 |
Msa0692620 | AT4G31820.1 | 39.139 | 534 | 276 | 10 | 1 | 511 | 1 | 508 | 3.31e-126 | 384 |
Msa0692620 | AT3G26490.1 | 38.561 | 542 | 267 | 12 | 1 | 493 | 1 | 525 | 5.86e-125 | 381 |
Msa0692620 | AT3G26490.3 | 38.561 | 542 | 267 | 12 | 1 | 493 | 1 | 525 | 5.86e-125 | 381 |
Msa0692620 | AT3G26490.4 | 38.561 | 542 | 267 | 12 | 1 | 493 | 1 | 525 | 5.86e-125 | 381 |
Msa0692620 | AT2G14820.2 | 38.690 | 504 | 278 | 6 | 1 | 482 | 1 | 495 | 6.97e-124 | 380 |
Msa0692620 | AT2G14820.1 | 38.690 | 504 | 278 | 6 | 1 | 482 | 1 | 495 | 6.97e-124 | 380 |
Msa0692620 | AT5G67440.3 | 40.496 | 484 | 275 | 6 | 1 | 477 | 1 | 478 | 2.79e-121 | 371 |
Msa0692620 | AT5G67440.1 | 40.496 | 484 | 275 | 6 | 1 | 477 | 1 | 478 | 2.79e-121 | 371 |
Msa0692620 | AT4G37590.1 | 39.736 | 531 | 273 | 12 | 1 | 513 | 1 | 502 | 3.17e-121 | 371 |
Msa0692620 | AT2G23050.1 | 40.568 | 493 | 248 | 9 | 1 | 483 | 1 | 458 | 7.62e-120 | 364 |
Msa0692620 | AT4G31820.2 | 38.462 | 481 | 248 | 9 | 53 | 511 | 1 | 455 | 4.33e-109 | 338 |
Msa0692620 | AT5G67440.2 | 39.955 | 443 | 254 | 5 | 41 | 477 | 5 | 441 | 4.28e-106 | 330 |
Msa0692620 | AT3G26490.2 | 37.759 | 482 | 233 | 12 | 1 | 435 | 1 | 462 | 1.06e-101 | 318 |
Msa0692620 | AT5G64330.2 | 32.483 | 588 | 283 | 9 | 7 | 484 | 33 | 616 | 5.72e-95 | 305 |
Msa0692620 | AT5G64330.1 | 32.483 | 588 | 283 | 9 | 7 | 484 | 33 | 616 | 1.23e-94 | 306 |
Msa0692620 | AT1G30440.1 | 34.047 | 514 | 290 | 8 | 1 | 473 | 1 | 506 | 1.87e-91 | 296 |
Msa0692620 | AT5G03250.1 | 33.002 | 503 | 304 | 7 | 1 | 473 | 1 | 500 | 3.99e-90 | 290 |
Msa0692620 | AT5G67385.1 | 34.542 | 469 | 291 | 8 | 23 | 482 | 22 | 483 | 4.32e-90 | 291 |
Msa0692620 | AT5G13600.1 | 34.337 | 498 | 295 | 9 | 1 | 473 | 1 | 491 | 5.07e-86 | 280 |
Msa0692620 | AT5G66560.1 | 33.398 | 515 | 277 | 8 | 23 | 473 | 16 | 528 | 3.83e-85 | 280 |
Msa0692620 | AT5G64330.3 | 31.957 | 557 | 265 | 9 | 38 | 484 | 5 | 557 | 4.54e-85 | 278 |
Msa0692620 | AT5G48800.1 | 34.542 | 469 | 265 | 7 | 25 | 475 | 40 | 484 | 7.81e-84 | 275 |
Msa0692620 | AT2G23050.2 | 39.523 | 377 | 189 | 7 | 111 | 483 | 1 | 342 | 3.72e-83 | 265 |
Msa0692620 | AT5G67385.4 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.07e-82 | 270 |
Msa0692620 | AT5G67385.5 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.07e-82 | 270 |
Msa0692620 | AT5G67385.2 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.07e-82 | 270 |
Msa0692620 | AT5G67385.3 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.07e-82 | 270 |
Msa0692620 | AT5G10250.2 | 29.268 | 574 | 337 | 9 | 5 | 540 | 29 | 571 | 2.65e-82 | 271 |
Msa0692620 | AT5G66560.4 | 35.915 | 426 | 251 | 6 | 68 | 473 | 66 | 489 | 9.94e-82 | 270 |
Msa0692620 | AT5G66560.3 | 35.915 | 426 | 251 | 6 | 68 | 473 | 76 | 499 | 1.62e-81 | 269 |
Msa0692620 | AT5G10250.1 | 29.590 | 561 | 331 | 9 | 8 | 540 | 32 | 556 | 6.94e-81 | 266 |
Msa0692620 | AT2G30520.1 | 32.112 | 464 | 287 | 6 | 21 | 475 | 25 | 469 | 1.87e-80 | 265 |
Msa0692620 | AT3G44820.1 | 31.800 | 500 | 300 | 9 | 13 | 473 | 10 | 507 | 1.31e-76 | 256 |
Msa0692620 | AT1G03010.2 | 31.588 | 554 | 320 | 10 | 24 | 532 | 7 | 546 | 9.13e-76 | 253 |
Msa0692620 | AT1G03010.3 | 31.393 | 567 | 328 | 11 | 11 | 532 | 22 | 572 | 1.07e-75 | 253 |
Msa0692620 | AT3G50840.1 | 34.755 | 469 | 278 | 9 | 16 | 473 | 6 | 457 | 1.10e-75 | 252 |
Msa0692620 | AT1G03010.1 | 31.588 | 554 | 320 | 10 | 24 | 532 | 34 | 573 | 1.41e-75 | 253 |
Msa0692620 | AT3G49970.1 | 33.333 | 426 | 248 | 8 | 34 | 458 | 2 | 392 | 6.39e-74 | 246 |
Msa0692620 | AT3G49970.2 | 33.333 | 426 | 248 | 8 | 34 | 458 | 2 | 392 | 6.39e-74 | 246 |
Msa0692620 | AT2G30520.2 | 32.118 | 439 | 270 | 6 | 46 | 475 | 2 | 421 | 5.89e-72 | 241 |
Msa0692620 | AT2G30520.3 | 32.118 | 439 | 270 | 6 | 46 | 475 | 2 | 421 | 5.89e-72 | 241 |
Msa0692620 | AT3G08660.1 | 31.078 | 473 | 286 | 11 | 10 | 473 | 23 | 464 | 3.63e-70 | 238 |
Msa0692620 | AT3G08570.1 | 30.818 | 477 | 304 | 10 | 13 | 473 | 22 | 488 | 9.36e-69 | 234 |
Msa0692620 | AT2G47860.1 | 30.146 | 481 | 288 | 9 | 23 | 475 | 34 | 494 | 7.44e-66 | 227 |
Msa0692620 | AT3G50840.2 | 34.259 | 432 | 256 | 9 | 53 | 473 | 7 | 421 | 2.52e-65 | 223 |
Msa0692620 | AT3G50840.3 | 34.259 | 432 | 256 | 9 | 53 | 473 | 7 | 421 | 2.52e-65 | 223 |
Msa0692620 | AT5G66560.2 | 31.049 | 467 | 256 | 8 | 23 | 425 | 16 | 480 | 7.41e-63 | 215 |
Msa0692620 | AT3G08660.3 | 31.163 | 430 | 261 | 10 | 53 | 473 | 1 | 404 | 1.27e-61 | 213 |
Msa0692620 | AT2G47860.3 | 28.770 | 504 | 288 | 10 | 23 | 475 | 34 | 517 | 8.90e-61 | 214 |
Msa0692620 | AT5G03250.2 | 29.923 | 391 | 243 | 6 | 111 | 473 | 1 | 388 | 1.71e-54 | 192 |
Msa0692620 | AT3G08660.2 | 29.812 | 426 | 259 | 11 | 10 | 426 | 23 | 417 | 2.33e-52 | 186 |
Msa0692620 | AT1G52770.1 | 36.860 | 293 | 164 | 6 | 201 | 483 | 28 | 309 | 6.63e-49 | 177 |
Msa0692620 | AT2G47860.4 | 29.234 | 431 | 257 | 9 | 23 | 425 | 34 | 444 | 1.52e-48 | 176 |
Msa0692620 | AT2G47860.6 | 27.753 | 454 | 257 | 10 | 23 | 425 | 34 | 467 | 8.82e-44 | 163 |
Msa0692620 | AT3G03510.1 | 30.424 | 401 | 223 | 12 | 80 | 473 | 8 | 359 | 5.54e-43 | 160 |
Msa0692620 | AT3G15570.1 | 34.643 | 280 | 162 | 5 | 209 | 475 | 37 | 308 | 1.63e-42 | 159 |
Msa0692620 | AT5G48130.1 | 27.133 | 457 | 296 | 12 | 26 | 473 | 39 | 467 | 2.71e-42 | 162 |
Msa0692620 | AT2G47860.5 | 28.753 | 393 | 235 | 8 | 111 | 475 | 1 | 376 | 5.36e-41 | 156 |
Msa0692620 | AT2G47860.2 | 28.753 | 393 | 235 | 8 | 111 | 475 | 1 | 376 | 5.36e-41 | 156 |
Msa0692620 | AT3G19850.1 | 26.722 | 479 | 296 | 11 | 29 | 473 | 6 | 463 | 3.16e-40 | 154 |
Msa0692620 | AT1G50280.2 | 27.626 | 438 | 278 | 11 | 67 | 483 | 17 | 436 | 1.17e-39 | 152 |
Msa0692620 | AT1G50280.1 | 27.830 | 424 | 272 | 10 | 67 | 469 | 50 | 460 | 1.80e-39 | 152 |
Msa0692620 | AT5G17580.2 | 27.468 | 466 | 300 | 12 | 21 | 473 | 15 | 455 | 1.05e-38 | 150 |
Msa0692620 | AT5G17580.1 | 27.527 | 465 | 299 | 12 | 22 | 473 | 1 | 440 | 2.63e-38 | 149 |
Msa0692620 | AT3G22104.1 | 28.414 | 454 | 261 | 14 | 28 | 458 | 6 | 418 | 5.68e-34 | 136 |
Msa0692620 | AT3G22104.4 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 2.09e-24 | 106 |
Msa0692620 | AT3G22104.2 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 2.09e-24 | 106 |
Msa0692620 | AT3G22104.3 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 2.09e-24 | 106 |
Find 262 sgRNAs with CRISPR-Local
Find 593 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGCCTCTTGCCTCTCTTAA+TGG | 0.159460 | 4_4:+61260015 | None:intergenic |
CTTGAGCTTCAACCTGTTAT+TGG | 0.186450 | 4_4:-61259857 | Msa0692620:three_prime_UTR |
TGATACCTTCAATGACATTT+TGG | 0.196402 | 4_4:+61261700 | None:intergenic |
GAAGCTACAAACTGCATATA+AGG | 0.221849 | 4_4:+61261995 | None:intergenic |
GTCTCGCTTGATTTGGCTTT+GGG | 0.225885 | 4_4:-61259922 | Msa0692620:three_prime_UTR |
TTTCCCTCAACCCGGAAAAT+TGG | 0.228829 | 4_4:-61258833 | Msa0692620:three_prime_UTR |
TCTGGCTTGGTCCTCCATTC+AGG | 0.229804 | 4_4:-61260219 | Msa0692620:three_prime_UTR |
ACCTATGGAGCTTTGGATTC+AGG | 0.231087 | 4_4:+61258881 | None:intergenic |
GTGCTTCCACCACAGCTTAT+TGG | 0.257853 | 4_4:-61263858 | Msa0692620:CDS |
GGAGAGTTGGGGCTTCCTTC+TGG | 0.263792 | 4_4:-61259966 | Msa0692620:three_prime_UTR |
TCTTTAGGACAAGAGTTTAA+TGG | 0.264714 | 4_4:-61262337 | Msa0692620:CDS |
TCAAGGGCAGAGGTAAATTA+AGG | 0.286615 | 4_4:-61259684 | Msa0692620:three_prime_UTR |
AAACAACATGAGATAATTCT+AGG | 0.287866 | 4_4:-61262403 | Msa0692620:CDS |
GGCGCAGTGGTTACTGTTAA+AGG | 0.291925 | 4_4:+61259634 | None:intergenic |
GTTTACCCGTTTCAGCTTGC+TGG | 0.292605 | 4_4:+61258858 | None:intergenic |
CCATCAATTGTGAAAGGATT+AGG | 0.293791 | 4_4:+61258689 | None:intergenic |
CAATAGAGTCATTCATTCTA+AGG | 0.299238 | 4_4:+61264296 | None:intergenic |
CTCTAAGCAGTGCTGTCATC+TGG | 0.312061 | 4_4:-61265375 | Msa0692620:five_prime_UTR |
GTCCTAAAGATTGTTTGCTT+TGG | 0.314234 | 4_4:+61262350 | None:intergenic |
TGGAAACTTTCTTGAAGCTT+TGG | 0.319994 | 4_4:-61263488 | Msa0692620:CDS |
AGTCTCGCTTGATTTGGCTT+TGG | 0.324272 | 4_4:-61259923 | Msa0692620:three_prime_UTR |
GAGAGAGTGAGTGGTTCGTT+TGG | 0.326551 | 4_4:+61267863 | None:intergenic |
GGCCCTAAGGCTAAGGAAAA+AGG | 0.327424 | 4_4:+61260087 | None:intergenic |
CAGGGAAGTCTCGCTTGATT+TGG | 0.330061 | 4_4:-61259929 | Msa0692620:three_prime_UTR |
ATCAGAACATAGCATGAAAA+AGG | 0.330713 | 4_4:-61262083 | Msa0692620:CDS |
CTTTGTAGGAGTCCACATTT+TGG | 0.332378 | 4_4:+61264478 | None:intergenic |
ACGGCATGGCCACGTACTTC+TGG | 0.332882 | 4_4:+61262520 | None:intergenic |
AGCTGCACTACAGTTCTTAA+TGG | 0.333339 | 4_4:+61262481 | None:intergenic |
CTATGCATGCCGGTGGTTAC+CGG | 0.333749 | 4_4:-61263820 | Msa0692620:CDS |
ATTGAGAAGGGAAACTTTGT+AGG | 0.333990 | 4_4:-61264277 | Msa0692620:CDS |
ACTCTATATCATAATAATTC+TGG | 0.336966 | 4_4:+61263526 | None:intergenic |
CTTCTCTCACTCCGCATTGT+TGG | 0.342842 | 4_4:+61259790 | None:intergenic |
GAGGCCACAATGCAGTAAAC+TGG | 0.345481 | 4_4:-61259999 | Msa0692620:three_prime_UTR |
TGATAAAGACAGAACTAATA+AGG | 0.345533 | 4_4:-61263617 | Msa0692620:CDS |
TCCTCAGTCCACCAATCCTT+TGG | 0.347878 | 4_4:+61263942 | None:intergenic |
ATCAATGAGTTTAATTATGA+TGG | 0.349883 | 4_4:-61267918 | Msa0692620:five_prime_UTR |
CCCCTTTGCCTTGTAATTAG+TGG | 0.349964 | 4_4:+61260410 | None:intergenic |
TTATTAAGCTTCGTGATTCC+CGG | 0.358494 | 4_4:+61263801 | None:intergenic |
TGCTGCTGGGCTTCTCACCT+TGG | 0.359430 | 4_4:+61259726 | None:intergenic |
AATCCAGTCTACAATTCCTT+TGG | 0.366844 | 4_4:-61260460 | Msa0692620:three_prime_UTR |
ACATTGTCCTCCACAACAAC+AGG | 0.375086 | 4_4:-61260321 | Msa0692620:three_prime_UTR |
TTAAATTGTGGTTGCGGTTG+TGG | 0.375799 | 4_4:+61261754 | None:intergenic |
AATCATAGCAAAGCCTTTGT+AGG | 0.376663 | 4_4:+61264464 | None:intergenic |
CTGGGAATGATGGCATAAAC+TGG | 0.377941 | 4_4:-61265356 | Msa0692620:five_prime_UTR |
GCTGCTGGGCTTCTCACCTT+GGG | 0.380710 | 4_4:+61259727 | None:intergenic |
TGGATCAAATGCAAACTTGT+TGG | 0.387082 | 4_4:+61260035 | None:intergenic |
CGTCAATGTCTTCCAATAAC+AGG | 0.390043 | 4_4:+61259845 | None:intergenic |
TTGCTATGATTCTAGTGATT+CGG | 0.393279 | 4_4:-61264452 | Msa0692620:CDS |
TTGCTGGACCTATGGAGCTT+TGG | 0.394318 | 4_4:+61258874 | None:intergenic |
TGCAAAATAAATCCAACTTC+AGG | 0.396591 | 4_4:-61265231 | Msa0692620:intron |
TGTTCAGTGTAGAAAGTATC+TGG | 0.401715 | 4_4:+61264759 | None:intergenic |
GGATCAAATGCAAACTTGTT+GGG | 0.402992 | 4_4:+61260036 | None:intergenic |
ATTCATGCATTCTTGAAAGT+TGG | 0.405825 | 4_4:-61264234 | Msa0692620:CDS |
TTGAGATCAATCAGAAATGT+AGG | 0.406103 | 4_4:-61263426 | Msa0692620:CDS |
AGCCAAAGCAAACAATCTTT+AGG | 0.407220 | 4_4:-61262352 | Msa0692620:CDS |
GGTGTTGAAGAAAGTTGTTT+TGG | 0.407642 | 4_4:+61259606 | None:intergenic |
TTTATCAACATCGATCGAAT+TGG | 0.408007 | 4_4:-61258788 | Msa0692620:three_prime_UTR |
AGCAGAGCAGACAAGATAAC+GGG | 0.408190 | 4_4:+61258718 | None:intergenic |
ACCATTCTGCGTTCGGTTCA+AGG | 0.409001 | 4_4:-61259701 | Msa0692620:three_prime_UTR |
GGCAATTGACATCTATCTTA+AGG | 0.413017 | 4_4:-61263280 | Msa0692620:intron |
ATCCAGTCTACAATTCCTTT+GGG | 0.415221 | 4_4:-61260459 | Msa0692620:three_prime_UTR |
TATTAATTATATAGTTATAC+AGG | 0.416025 | 4_4:-61267466 | Msa0692620:intron |
TCTAGCAACCACTTGAAGAT+AGG | 0.417159 | 4_4:+61263389 | None:intergenic |
ATGGGTGGAGGCTGAACAAT+TGG | 0.418246 | 4_4:-61260387 | Msa0692620:three_prime_UTR |
TTATCTGCCTTACTCAGATC+AGG | 0.424226 | 4_4:+61262583 | None:intergenic |
AGTATATGAATCACAATGTT+TGG | 0.424679 | 4_4:+61267816 | None:intergenic |
CAGCAAAACCATTCTGCGTT+CGG | 0.425210 | 4_4:-61259708 | Msa0692620:three_prime_UTR |
CATCGTTGATTTGTATTACA+AGG | 0.427373 | 4_4:+61264621 | None:intergenic |
ATCTTCTGTGCTGGGCCCTA+AGG | 0.432757 | 4_4:+61260074 | None:intergenic |
TGAACAGGAGAAAGGGTCTA+TGG | 0.435017 | 4_4:-61262449 | Msa0692620:CDS |
CTCTACTTTGAACAGGAGAA+AGG | 0.436340 | 4_4:-61262457 | Msa0692620:CDS |
GCAGCTTCTCTACTTTGAAC+AGG | 0.439971 | 4_4:-61262464 | Msa0692620:CDS |
AAATTGGAAGATCAACATAA+TGG | 0.440950 | 4_4:-61258817 | Msa0692620:three_prime_UTR |
CCAAACCAAAATGTCATTGA+AGG | 0.442392 | 4_4:-61261705 | Msa0692620:intron |
CTGGCTTGGTCCTCCATTCA+GGG | 0.444358 | 4_4:-61260218 | Msa0692620:three_prime_UTR |
AAAATGAAGTTCATGAAACT+TGG | 0.444516 | 4_4:-61264789 | Msa0692620:CDS |
GGGTTGGAGTAAGGAGAGTT+GGG | 0.449041 | 4_4:-61259978 | Msa0692620:three_prime_UTR |
AATTGCAATCTCACAGTCTC+TGG | 0.450086 | 4_4:-61260237 | Msa0692620:three_prime_UTR |
TCAAGCTGAGAAGAAGTTGA+AGG | 0.450893 | 4_4:+61260167 | None:intergenic |
CCCACTAATTACAAGGCAAA+GGG | 0.450922 | 4_4:-61260411 | Msa0692620:three_prime_UTR |
TTCACAGGAGAGACAGTATA+GGG | 0.451347 | 4_4:+61261927 | None:intergenic |
AATTCTCACACCCTCGCAAC+AGG | 0.451795 | 4_4:-61264113 | Msa0692620:intron |
CCCTTTGCCTTGTAATTAGT+GGG | 0.453593 | 4_4:+61260411 | None:intergenic |
CTCTCTAGTAGTAGTAACTT+TGG | 0.456024 | 4_4:+61265436 | None:intergenic |
CTATATAATTAATACTGGTC+TGG | 0.456232 | 4_4:+61267475 | None:intergenic |
TAGCTGTTATCCACAGCACC+AGG | 0.458542 | 4_4:+61263453 | None:intergenic |
TCTGGAGATCAACGGTAGAC+AGG | 0.459709 | 4_4:-61259948 | Msa0692620:three_prime_UTR |
ATAGGTCCAGCAAGCTGAAA+CGG | 0.460840 | 4_4:-61258864 | Msa0692620:three_prime_UTR |
GTTTCAGCTTGCTGGACCTA+TGG | 0.461449 | 4_4:+61258866 | None:intergenic |
CAGTAAACTGGGTTGGAGTA+AGG | 0.461671 | 4_4:-61259987 | Msa0692620:three_prime_UTR |
GACAGAGGGTCTGTTTCAGT+TGG | 0.461892 | 4_4:-61263690 | Msa0692620:CDS |
ATGCAGCATGATGTGGATGC+TGG | 0.463221 | 4_4:+61259583 | None:intergenic |
AAAACTGTTATCTTCTGTGC+TGG | 0.464506 | 4_4:+61260065 | None:intergenic |
GAGAGCAAGCTTACAGTTTG+AGG | 0.464638 | 4_4:-61263595 | Msa0692620:CDS |
CCTCAGTCCACCAATCCTTT+GGG | 0.464853 | 4_4:+61263943 | None:intergenic |
CAAAATGTGGACTCCTACAA+AGG | 0.468663 | 4_4:-61264477 | Msa0692620:CDS |
TAGGTCCAGCAAGCTGAAAC+GGG | 0.471436 | 4_4:-61258863 | Msa0692620:three_prime_UTR |
CAATCTCACAGTCTCTGGCT+TGG | 0.478239 | 4_4:-61260232 | Msa0692620:three_prime_UTR |
GTAATGTAGCAGTAGTTTGA+AGG | 0.478481 | 4_4:+61264194 | None:intergenic |
GACTGTGAGATTGCAATTTG+AGG | 0.479181 | 4_4:+61260242 | None:intergenic |
TGCCTTGTAATTAGTGGGAA+AGG | 0.479957 | 4_4:+61260416 | None:intergenic |
GTGACTTTCACACCTGAAGT+TGG | 0.480777 | 4_4:+61265219 | None:intergenic |
CTTCACAGGAGAGACAGTAT+AGG | 0.481496 | 4_4:+61261926 | None:intergenic |
AAGCTACAAACTGCATATAA+GGG | 0.481519 | 4_4:+61261996 | None:intergenic |
ATTGTTCATGTTTGAGAGGA+AGG | 0.483001 | 4_4:-61261862 | Msa0692620:three_prime_UTR |
TATAACTATATAATTAATAC+TGG | 0.484317 | 4_4:+61267470 | None:intergenic |
TGCAAATTTAGCATTAGACT+TGG | 0.484426 | 4_4:-61262245 | Msa0692620:CDS |
GTCATTCATTCTAAGGAACT+TGG | 0.484520 | 4_4:+61264303 | None:intergenic |
TTCACTTGCATGACTCTCTC+AGG | 0.485508 | 4_4:-61260297 | Msa0692620:three_prime_UTR |
AGAGTTAGTTCTAGCAGTGT+TGG | 0.487244 | 4_4:-61263508 | Msa0692620:CDS |
TTGAAGAGACAGAGTCAGAA+AGG | 0.488396 | 4_4:-61262192 | Msa0692620:CDS |
CCAGAGTGGTCTGAGAATCT+TGG | 0.488838 | 4_4:-61264172 | Msa0692620:CDS |
ATGATTCTGTGCAGGTGAAA+TGG | 0.489710 | 4_4:-61264016 | Msa0692620:intron |
GAAGGGGCTTCAAGCGAAGT+AGG | 0.491289 | 4_4:-61259814 | Msa0692620:three_prime_UTR |
AGGTTCCTTTAGGTTGTTGA+AGG | 0.492238 | 4_4:+61260107 | None:intergenic |
GAGAGAAGAGAGAGAGTGAG+TGG | 0.492255 | 4_4:+61267854 | None:intergenic |
AAGCTCAAGCGGCTTGCACC+TGG | 0.493402 | 4_4:+61259871 | None:intergenic |
AACCTTTCCCACTAATTACA+AGG | 0.497942 | 4_4:-61260418 | Msa0692620:three_prime_UTR |
TAGTTATTACATCTGTGAAA+AGG | 0.498469 | 4_4:+61261956 | None:intergenic |
GTAACTTTGGAAGTAACATC+AGG | 0.499160 | 4_4:+61265449 | None:intergenic |
TATGCATGCCGGTGGTTACC+GGG | 0.501159 | 4_4:-61263819 | Msa0692620:CDS |
AAGGCAAAGGGGATGGGTGG+AGG | 0.501270 | 4_4:-61260399 | Msa0692620:three_prime_UTR |
ACCATTCTGTCCCAAAGGAT+TGG | 0.504137 | 4_4:-61263953 | Msa0692620:CDS |
TTTGCCCTTCTTCCAAAATG+TGG | 0.505993 | 4_4:-61264490 | Msa0692620:CDS |
ACGAAGCTTAATAAAAGCTC+AGG | 0.506205 | 4_4:-61263792 | Msa0692620:CDS |
AATTCTTGAAAGTAGAGAAA+AGG | 0.506277 | 4_4:-61262293 | Msa0692620:CDS |
CCCTTGAACCGAACGCAGAA+TGG | 0.506789 | 4_4:+61259700 | None:intergenic |
CCATTCTGCGTTCGGTTCAA+GGG | 0.507091 | 4_4:-61259700 | Msa0692620:three_prime_UTR |
GTAGTTTGAAGGGTTGCAAT+GGG | 0.507662 | 4_4:+61264205 | None:intergenic |
GCGGCTTGCACCTGGTCTTG+TGG | 0.509002 | 4_4:+61259879 | None:intergenic |
TAATTACAAGGCAAAGGGGA+TGG | 0.510072 | 4_4:-61260406 | Msa0692620:three_prime_UTR |
ATCCTATCCTCGAGAAGCTA+AGG | 0.510217 | 4_4:+61258746 | None:intergenic |
TGATGTCGTCACTTCATCAA+TGG | 0.515022 | 4_4:+61265310 | None:intergenic |
TCTCCTGTGAAGTTGTAACT+AGG | 0.516206 | 4_4:-61261915 | Msa0692620:three_prime_UTR |
ACCAATCCTTTGGGACAGAA+TGG | 0.517753 | 4_4:+61263952 | None:intergenic |
ATTTGAGGTGCTGGCAAAAG+TGG | 0.517847 | 4_4:+61260257 | None:intergenic |
TCTACTTTGAACAGGAGAAA+GGG | 0.518033 | 4_4:-61262456 | Msa0692620:CDS |
TGGGTTGGAGTAAGGAGAGT+TGG | 0.520127 | 4_4:-61259979 | Msa0692620:three_prime_UTR |
TGTGTAACCGGGTCTGGTGT+AGG | 0.520651 | 4_4:+61263986 | None:intergenic |
TCCCACTAATTACAAGGCAA+AGG | 0.521666 | 4_4:-61260412 | Msa0692620:three_prime_UTR |
CAGCAGAGCAGACAAGATAA+CGG | 0.524622 | 4_4:+61258717 | None:intergenic |
GAAACAGACCCTCTGTCTGC+AGG | 0.525704 | 4_4:+61263696 | None:intergenic |
AATTACAAGGCAAAGGGGAT+GGG | 0.526486 | 4_4:-61260405 | Msa0692620:three_prime_UTR |
TACCCAAAGGAATTGTAGAC+TGG | 0.527226 | 4_4:+61260457 | None:intergenic |
TTCTGTCTTTATCACTGATG+AGG | 0.527594 | 4_4:+61263626 | None:intergenic |
TCACCACAGACATAAAAGAT+TGG | 0.529296 | 4_4:-61262269 | Msa0692620:CDS |
TCAAAAGCATCTTCCCCTCC+AGG | 0.529984 | 4_4:+61264400 | None:intergenic |
TGTGCTGGGCCCTAAGGCTA+AGG | 0.531214 | 4_4:+61260080 | None:intergenic |
TGCGTTCGGTTCAAGGGCAG+AGG | 0.531591 | 4_4:-61259694 | Msa0692620:three_prime_UTR |
TGCAGCATGATGTGGATGCT+GGG | 0.532335 | 4_4:+61259584 | None:intergenic |
AATGAATGACTCTATTGAGA+AGG | 0.532339 | 4_4:-61264290 | Msa0692620:CDS |
CCACAATTTAAAATCATACA+TGG | 0.534648 | 4_4:-61261742 | Msa0692620:three_prime_UTR |
TCTAAGCAGTGCTGTCATCT+GGG | 0.535886 | 4_4:-61265374 | Msa0692620:five_prime_UTR |
ATGAATGACTCTATTGAGAA+GGG | 0.537138 | 4_4:-61264289 | Msa0692620:CDS |
TGGTCTACTCTTGCAATGCT+CGG | 0.537710 | 4_4:+61263318 | None:intergenic |
TATCCTCGAGAAGCTAAGGT+TGG | 0.539663 | 4_4:+61258750 | None:intergenic |
GACATTGACGCAGCGAAGGA+AGG | 0.541405 | 4_4:-61259832 | Msa0692620:three_prime_UTR |
TGAAGAGACAGAGTCAGAAA+GGG | 0.541907 | 4_4:-61262191 | Msa0692620:CDS |
TAAGTGTGCTAACTAACAAT+GGG | 0.542502 | 4_4:+61260349 | None:intergenic |
GAGATTGCAATTTGAGGTGC+TGG | 0.543711 | 4_4:+61260248 | None:intergenic |
ACATTGACGCAGCGAAGGAA+GGG | 0.545329 | 4_4:-61259831 | Msa0692620:three_prime_UTR |
AAGAAGTTGAAGGAAGGAGA+TGG | 0.546573 | 4_4:+61260177 | None:intergenic |
ATCCTCGAGAAGCTAAGGTT+GGG | 0.547001 | 4_4:+61258751 | None:intergenic |
ATTCTGTCCCAAAGGATTGG+TGG | 0.547591 | 4_4:-61263950 | Msa0692620:CDS |
GACGATAACTCCACAAGACC+AGG | 0.550266 | 4_4:-61259889 | Msa0692620:three_prime_UTR |
GGTGCATCCTGATCTGAGTA+AGG | 0.550735 | 4_4:-61262590 | Msa0692620:CDS |
ATGCATTCTTGAAAGTTGGA+AGG | 0.551432 | 4_4:-61264230 | Msa0692620:CDS |
ATCCCTAGTTACAACTTCAC+AGG | 0.551594 | 4_4:+61261912 | None:intergenic |
CAAGGGCAGAGGTAAATTAA+GGG | 0.552587 | 4_4:-61259683 | Msa0692620:three_prime_UTR |
TACAAGGCAAAGGGGATGGG+TGG | 0.555324 | 4_4:-61260402 | Msa0692620:three_prime_UTR |
TTGTTTCTGACCTGTTGCGA+GGG | 0.556069 | 4_4:+61264103 | None:intergenic |
AAATGAAGTTCATGAAACTT+GGG | 0.559279 | 4_4:-61264788 | Msa0692620:CDS |
GTGAGAGAAGAGGAGCACTC+TGG | 0.561502 | 4_4:-61259777 | Msa0692620:three_prime_UTR |
TTTCATTGTTCATGTTTGAG+AGG | 0.563611 | 4_4:-61261866 | Msa0692620:three_prime_UTR |
TGCATTTGATCCATTAAGAG+AGG | 0.563952 | 4_4:-61260025 | Msa0692620:three_prime_UTR |
AGTAGTTTGAAGGGTTGCAA+TGG | 0.564457 | 4_4:+61264204 | None:intergenic |
CTCCTGTGAAGTTGTAACTA+GGG | 0.565768 | 4_4:-61261914 | Msa0692620:three_prime_UTR |
TCTACTTTCAAGAATTTGAG+TGG | 0.566408 | 4_4:+61262300 | None:intergenic |
GCAAGTGAACCCTGTTGTTG+TGG | 0.566883 | 4_4:+61260311 | None:intergenic |
ATTTGTATTACAAGGTCTGA+GGG | 0.567132 | 4_4:+61264629 | None:intergenic |
TCGTGATTCCCGGTAACCAC+CGG | 0.567730 | 4_4:+61263811 | None:intergenic |
GATTTGTATTACAAGGTCTG+AGG | 0.574070 | 4_4:+61264628 | None:intergenic |
CTGGAGATCAACGGTAGACA+GGG | 0.576437 | 4_4:-61259947 | Msa0692620:three_prime_UTR |
AAACTGTTATCTTCTGTGCT+GGG | 0.576518 | 4_4:+61260066 | None:intergenic |
TTAAGTGTGCTAACTAACAA+TGG | 0.577002 | 4_4:+61260348 | None:intergenic |
TCCTGAATCCAAAGCTCCAT+AGG | 0.578726 | 4_4:-61258882 | Msa0692620:three_prime_UTR |
ATAATAATTCTGGTCTGAAG+AGG | 0.580103 | 4_4:+61263536 | None:intergenic |
TCCTTCACCTACACCAGACC+CGG | 0.580358 | 4_4:-61263993 | Msa0692620:CDS |
AAGAATGTCCCCTGGTGCTG+TGG | 0.580374 | 4_4:-61263463 | Msa0692620:CDS |
GCTTCACCAATAAGCTGTGG+TGG | 0.583607 | 4_4:+61263852 | None:intergenic |
CATTGACGCAGCGAAGGAAG+GGG | 0.586737 | 4_4:-61259830 | Msa0692620:three_prime_UTR |
TTGAGGGTTTCCCTGAATGG+AGG | 0.587052 | 4_4:+61260208 | None:intergenic |
ATCTGCCTTCAACAACCTAA+AGG | 0.587519 | 4_4:-61260112 | Msa0692620:three_prime_UTR |
GTGCTGTCATCTGGGAATGA+TGG | 0.588080 | 4_4:-61265366 | Msa0692620:five_prime_UTR |
ACAGAGTCAGAAAGGGTGAG+AGG | 0.589004 | 4_4:-61262184 | Msa0692620:CDS |
ACCGGGTCTGGTGTAGGTGA+AGG | 0.590318 | 4_4:+61263992 | None:intergenic |
TAATGTAGCAGTAGTTTGAA+GGG | 0.590928 | 4_4:+61264195 | None:intergenic |
AAGGGGCTTCAAGCGAAGTA+GGG | 0.593689 | 4_4:-61259813 | Msa0692620:three_prime_UTR |
AAGTAGTTCGAGCTACAAGT+TGG | 0.595940 | 4_4:-61262149 | Msa0692620:CDS |
GCTTCATGATATACCTGGAG+GGG | 0.598800 | 4_4:-61264413 | Msa0692620:CDS |
AGAGGACATATCAATTGCAT+AGG | 0.599110 | 4_4:-61261817 | Msa0692620:three_prime_UTR |
AACCTTAGCTTCTCGAGGAT+AGG | 0.599822 | 4_4:-61258748 | Msa0692620:three_prime_UTR |
GGCTTCCTTCTGGAGATCAA+CGG | 0.602080 | 4_4:-61259956 | Msa0692620:three_prime_UTR |
CCAAGATTCTCAGACCACTC+TGG | 0.602252 | 4_4:+61264172 | None:intergenic |
AGCAAGCTTACAGTTTGAGG+AGG | 0.602564 | 4_4:-61263592 | Msa0692620:CDS |
CACAATGCAGTAAACTGGGT+TGG | 0.603100 | 4_4:-61259994 | Msa0692620:three_prime_UTR |
GTGGAGCTTCATGATATACC+TGG | 0.604285 | 4_4:-61264418 | Msa0692620:CDS |
GGAAGACATTGACGCAGCGA+AGG | 0.605897 | 4_4:-61259836 | Msa0692620:three_prime_UTR |
TCTACACTGAACAAGCTACC+AGG | 0.607293 | 4_4:-61264749 | Msa0692620:intron |
CAAACTGCATATAAGGGAGG+TGG | 0.607723 | 4_4:+61262002 | None:intergenic |
CGTGCTATGCTATACATCAA+AGG | 0.608535 | 4_4:-61260492 | Msa0692620:three_prime_UTR |
CATAGACTCCTATCTTCAAG+TGG | 0.609809 | 4_4:-61263397 | Msa0692620:CDS |
TTTGTTTCTGACCTGTTGCG+AGG | 0.609870 | 4_4:+61264102 | None:intergenic |
TTGGTATATGCAGCATGATG+TGG | 0.610270 | 4_4:+61259576 | None:intergenic |
GCAGAGGTAAATTAAGGGGA+TGG | 0.610472 | 4_4:-61259678 | Msa0692620:three_prime_UTR |
AGCTTCATGATATACCTGGA+GGG | 0.613646 | 4_4:-61264414 | Msa0692620:CDS |
AGGCCACAATGCAGTAAACT+GGG | 0.615303 | 4_4:-61259998 | Msa0692620:three_prime_UTR |
CAGATAAGAAGAGACTGTGT+GGG | 0.617913 | 4_4:-61262567 | Msa0692620:CDS |
CTTTGGAAAAGAATGTCCCC+TGG | 0.619063 | 4_4:-61263471 | Msa0692620:CDS |
CTTTGCATGTCTATGCATGC+CGG | 0.619328 | 4_4:-61263830 | Msa0692620:CDS |
TGCCCAACCTTAGCTTCTCG+AGG | 0.619788 | 4_4:-61258753 | Msa0692620:three_prime_UTR |
GCTGAGAAGAAGTTGAAGGA+AGG | 0.620854 | 4_4:+61260171 | None:intergenic |
CAACCCAGTTTACTGCATTG+TGG | 0.622717 | 4_4:+61259995 | None:intergenic |
TCTGGCCACGAGAAGCATAA+CGG | 0.627594 | 4_4:-61259759 | Msa0692620:three_prime_UTR |
CATCTCCGTTATGCTTCTCG+TGG | 0.628008 | 4_4:+61259754 | None:intergenic |
GCATGATTCCTGCAGACAGA+GGG | 0.630954 | 4_4:-61263704 | Msa0692620:CDS |
ACAGCACCATTCTGTCCCAA+AGG | 0.631036 | 4_4:-61263958 | Msa0692620:CDS |
AGACCACAACGATCTATACA+AGG | 0.631528 | 4_4:-61263301 | Msa0692620:CDS |
ATAACAGGTTGAAGCTCAAG+CGG | 0.631694 | 4_4:+61259860 | None:intergenic |
AAGGGCAGAGGTAAATTAAG+GGG | 0.631814 | 4_4:-61259682 | Msa0692620:three_prime_UTR |
GTCTACCGTTGATCTCCAGA+AGG | 0.637715 | 4_4:+61259951 | None:intergenic |
AAGACAATATGTATTGCTAG+AGG | 0.649156 | 4_4:-61261835 | Msa0692620:three_prime_UTR |
TTGCCTTGTATAGATCGTTG+TGG | 0.649985 | 4_4:+61263298 | None:intergenic |
TGCATGTCTATGCATGCCGG+TGG | 0.650418 | 4_4:-61263827 | Msa0692620:CDS |
ATACATGAACATGTGATCGA+AGG | 0.651058 | 4_4:+61267651 | None:intergenic |
AGTTCATGAAACTTGGGACA+AGG | 0.654108 | 4_4:-61264782 | Msa0692620:CDS |
GCAGATAAGAAGAGACTGTG+TGG | 0.654770 | 4_4:-61262568 | Msa0692620:CDS |
GTAAACCATTTCCCTCAACC+CGG | 0.655146 | 4_4:-61258841 | Msa0692620:three_prime_UTR |
AGCATGATTCCTGCAGACAG+AGG | 0.655585 | 4_4:-61263705 | Msa0692620:CDS |
GCTGTTATCCACAGCACCAG+GGG | 0.656030 | 4_4:+61263455 | None:intergenic |
GAGGTGCTGGCAAAAGTGGA+TGG | 0.657394 | 4_4:+61260261 | None:intergenic |
GGTTGGAGTAAGGAGAGTTG+GGG | 0.660619 | 4_4:-61259977 | Msa0692620:three_prime_UTR |
ATAACGGAGATGCTCACCCA+AGG | 0.663953 | 4_4:-61259743 | Msa0692620:three_prime_UTR |
GCAGCATGATGTGGATGCTG+GGG | 0.665872 | 4_4:+61259585 | None:intergenic |
ACAATGCGGAGTGAGAGAAG+AGG | 0.666525 | 4_4:-61259787 | Msa0692620:three_prime_UTR |
CCACTAATTACAAGGCAAAG+GGG | 0.667806 | 4_4:-61260410 | Msa0692620:three_prime_UTR |
AGCTGTTATCCACAGCACCA+GGG | 0.676561 | 4_4:+61263454 | None:intergenic |
TGTTGTTGTGGAGGACAATG+TGG | 0.683514 | 4_4:+61260323 | None:intergenic |
CATTGTCCTCCACAACAACA+GGG | 0.684106 | 4_4:-61260320 | Msa0692620:three_prime_UTR |
GATCCATTAAGAGAGGCAAG+AGG | 0.685845 | 4_4:-61260018 | Msa0692620:three_prime_UTR |
GAGCTTCATGATATACCTGG+AGG | 0.685850 | 4_4:-61264415 | Msa0692620:CDS |
CCCAAAGGATTGGTGGACTG+AGG | 0.687423 | 4_4:-61263943 | Msa0692620:CDS |
AGTGAACCCTGTTGTTGTGG+AGG | 0.690126 | 4_4:+61260314 | None:intergenic |
AAAGCTTCACCAATAAGCTG+TGG | 0.694004 | 4_4:+61263849 | None:intergenic |
GCGAAGTAGGGCCAACAATG+CGG | 0.699318 | 4_4:-61259801 | Msa0692620:three_prime_UTR |
TCATCAGGAACAGACACATG+AGG | 0.708388 | 4_4:-61265490 | Msa0692620:intron |
TGTTACTTATCTGCTACACA+AGG | 0.712317 | 4_4:-61264600 | Msa0692620:intron |
CTACAAACTGCATATAAGGG+AGG | 0.712499 | 4_4:+61261999 | None:intergenic |
CTACTGCTACATTACCAGAG+TGG | 0.738581 | 4_4:-61264186 | Msa0692620:CDS |
GGGAGACTCAGATTAAAGTG+CGG | 0.742239 | 4_4:-61261778 | Msa0692620:three_prime_UTR |
GCAGAGCAGACAAGATAACG+GGG | 0.768868 | 4_4:+61258719 | None:intergenic |
AAACTGACACCAGAAGTACG+TGG | 0.774606 | 4_4:-61262529 | Msa0692620:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAACTATATAATTAATAC+TGG | + | chr4_4:61259171-61259190 | None:intergenic | 10.0% |
!! | TATTAATTATATAGTTATAC+AGG | - | chr4_4:61259172-61259191 | Msa0692620:intron | 10.0% |
!! | ATTAATAAATTAAAAGCTTA+AGG | - | chr4_4:61259383-61259402 | Msa0692620:intron | 10.0% |
!! | TTAAAAAATTTCAAAAGTAA+AGG | - | chr4_4:61259486-61259505 | Msa0692620:intron | 10.0% |
!! | TAAAAAATTTCAAAAGTAAA+GGG | - | chr4_4:61259487-61259506 | Msa0692620:intron | 10.0% |
!!! | AAAAAAAAAAAACTTTTTGT+AGG | - | chr4_4:61259527-61259546 | Msa0692620:intron | 10.0% |
!! | TAATTTAATAATAAGAAATG+AGG | + | chr4_4:61260729-61260748 | None:intergenic | 10.0% |
!! | ATTTCTTATTATTAAATTAG+AGG | - | chr4_4:61260730-61260749 | Msa0692620:intron | 10.0% |
!! | TTTCTTATTATTAAATTAGA+GGG | - | chr4_4:61260731-61260750 | Msa0692620:intron | 10.0% |
!!! | TTTTTTCTTTTTTGAAAAAA+AGG | - | chr4_4:61261027-61261046 | Msa0692620:intron | 10.0% |
!!! | TGTAATTTAAAGTAAATAAA+GGG | + | chr4_4:61263462-61263481 | None:intergenic | 10.0% |
!!! | TTGTAATTTAAAGTAAATAA+AGG | + | chr4_4:61263463-61263482 | None:intergenic | 10.0% |
!!! | AGTATTTTTAGAATTGAAAA+AGG | + | chr4_4:61259130-61259149 | None:intergenic | 15.0% |
!! | TTTATTAATTAATAGAGTTG+AGG | + | chr4_4:61259372-61259391 | None:intergenic | 15.0% |
!!! | AAAATTCATAAAAAAGTGTA+AGG | + | chr4_4:61259785-61259804 | None:intergenic | 15.0% |
!!! | ATGGTTAATTTAATTTATTG+AGG | + | chr4_4:61260020-61260039 | None:intergenic | 15.0% |
!! | TGTAAAAATTCTATAATGAT+TGG | - | chr4_4:61260598-61260617 | Msa0692620:intron | 15.0% |
!! | TTCTTATTATTAAATTAGAG+GGG | - | chr4_4:61260732-61260751 | Msa0692620:intron | 15.0% |
!!! | TTTTCAAAAAAGAAAAAACA+GGG | + | chr4_4:61261025-61261044 | None:intergenic | 15.0% |
!!! | TTTTTCAAAAAAGAAAAAAC+AGG | + | chr4_4:61261026-61261045 | None:intergenic | 15.0% |
!!! | TAATTTAAAGTAAATAAAGG+GGG | + | chr4_4:61263460-61263479 | None:intergenic | 15.0% |
!!! | GTAATTTAAAGTAAATAAAG+GGG | + | chr4_4:61263461-61263480 | None:intergenic | 15.0% |
!!! | TAAGATATTTCTATAACAAA+AGG | + | chr4_4:61263915-61263934 | None:intergenic | 15.0% |
!! | ATCAATGAGTTTAATTATGA+TGG | - | chr4_4:61258720-61258739 | Msa0692620:three_prime_UTR | 20.0% |
!! | TTGAAGAAATTAGATAAAAC+AGG | + | chr4_4:61259076-61259095 | None:intergenic | 20.0% |
!! | AGTACTATAAAGTAACAAAA+TGG | + | chr4_4:61259252-61259271 | None:intergenic | 20.0% |
!! | ATATTATAGAGAGATAAACA+TGG | - | chr4_4:61259304-61259323 | Msa0692620:intron | 20.0% |
!! | TATTATAGAGAGATAAACAT+GGG | - | chr4_4:61259305-61259324 | Msa0692620:intron | 20.0% |
!!! | TAAAGATGAATTATCACTTT+TGG | - | chr4_4:61259424-61259443 | Msa0692620:intron | 20.0% |
!!! | ATTCATTTTAGACTATTATG+TGG | + | chr4_4:61259595-61259614 | None:intergenic | 20.0% |
!! | TTGATTCCTATATACTTAAT+GGG | - | chr4_4:61260242-61260261 | Msa0692620:three_prime_UTR | 20.0% |
!!! | TTATTGATAATGTTTTTGTG+AGG | + | chr4_4:61260416-61260435 | None:intergenic | 20.0% |
!! | AATAATATTTGCTTTCTGTA+AGG | - | chr4_4:61260431-61260450 | Msa0692620:three_prime_UTR | 20.0% |
!!! | TATGTTAGTTTTTCAAAAAC+AGG | + | chr4_4:61260857-61260876 | None:intergenic | 20.0% |
!! | AATCAACTAGAAAAATTTAC+AGG | - | chr4_4:61260915-61260934 | Msa0692620:intron | 20.0% |
!!! | GAATTTCTTGTTTTTTTCTT+TGG | - | chr4_4:61261304-61261323 | Msa0692620:intron | 20.0% |
!! | CATCATTTCAAGAAATTAAA+GGG | + | chr4_4:61261583-61261602 | None:intergenic | 20.0% |
!! | TTGATGAACATAATTAGAAT+TGG | + | chr4_4:61261666-61261685 | None:intergenic | 20.0% |
!! | ACTCTATATCATAATAATTC+TGG | + | chr4_4:61263115-61263134 | None:intergenic | 20.0% |
!! | TAACATATCAACCTATAATT+TGG | - | chr4_4:61263646-61263665 | Msa0692620:CDS | 20.0% |
!!! | AGCTATTTTCATAAGTTATT+CGG | + | chr4_4:61263858-61263877 | None:intergenic | 20.0% |
!! | ATCCTAAAAAAATCATAAGA+AGG | - | chr4_4:61264521-61264540 | Msa0692620:intron | 20.0% |
!! | TCCTAAAAAAATCATAAGAA+GGG | - | chr4_4:61264522-61264541 | Msa0692620:intron | 20.0% |
!!! | ATAGGTAATTTCATATTTTC+AGG | - | chr4_4:61264839-61264858 | Msa0692620:five_prime_UTR | 20.0% |
!!! | TAGGTAATTTCATATTTTCA+GGG | - | chr4_4:61264840-61264859 | Msa0692620:five_prime_UTR | 20.0% |
!! | TTTACAGAATAATATTGCAA+AGG | + | chr4_4:61265505-61265524 | None:intergenic | 20.0% |
!! | GCAATATTATTCTGTAAAAT+AGG | - | chr4_4:61265507-61265526 | Msa0692620:intron | 20.0% |
!!! | ACTTTGAAAAGTTAAATTAG+TGG | + | chr4_4:61265533-61265552 | None:intergenic | 20.0% |
!! | AATTGTCAACTTAAAAATGT+AGG | + | chr4_4:61265996-61266015 | None:intergenic | 20.0% |
!! | TAAATTCCAATCATATAGTT+AGG | - | chr4_4:61267208-61267227 | Msa0692620:intron | 20.0% |
!! | AAAAAAACAAGAAAAGAAGA+AGG | + | chr4_4:61267281-61267300 | None:intergenic | 20.0% |
!!! | TTGAATTTTAGGAACTAAAT+TGG | - | chr4_4:61267500-61267519 | Msa0692620:five_prime_UTR | 20.0% |
! | AGTATATGAATCACAATGTT+TGG | + | chr4_4:61258825-61258844 | None:intergenic | 25.0% |
! | CTATATAATTAATACTGGTC+TGG | + | chr4_4:61259166-61259185 | None:intergenic | 25.0% |
! | ATTATAGAGAGATAAACATG+GGG | - | chr4_4:61259306-61259325 | Msa0692620:intron | 25.0% |
! | ATAAGGAAAATTGGAGAAAA+AGG | - | chr4_4:61259453-61259472 | Msa0692620:intron | 25.0% |
! | AAAATACATGAAAATGCAAC+TGG | + | chr4_4:61259713-61259732 | None:intergenic | 25.0% |
! | AGAAACAAAGGTAAAAAGTT+AGG | - | chr4_4:61260210-61260229 | Msa0692620:three_prime_UTR | 25.0% |
! | AGTATATAGGAATCAAGAAT+TGG | + | chr4_4:61260238-61260257 | None:intergenic | 25.0% |
! | CTTGATTCCTATATACTTAA+TGG | - | chr4_4:61260241-61260260 | Msa0692620:three_prime_UTR | 25.0% |
!!! | AGTTTTTTATTGCTTTCTCT+CGG | - | chr4_4:61260469-61260488 | Msa0692620:three_prime_UTR | 25.0% |
! | ACATAATTGCTTTCATTAGA+AGG | + | chr4_4:61260797-61260816 | None:intergenic | 25.0% |
! | AATGAAAGCAATTATGTTTG+AGG | - | chr4_4:61260800-61260819 | Msa0692620:intron | 25.0% |
! | TGTGAATTGAAATAACTGTT+GGG | + | chr4_4:61261097-61261116 | None:intergenic | 25.0% |
! | ATGTGAATTGAAATAACTGT+TGG | + | chr4_4:61261098-61261117 | None:intergenic | 25.0% |
! | ATTTCAAGAAATTAAAGGGA+TGG | + | chr4_4:61261579-61261598 | None:intergenic | 25.0% |
! | CCATCATTTCAAGAAATTAA+AGG | + | chr4_4:61261584-61261603 | None:intergenic | 25.0% |
!! | CCTTTAATTTCTTGAAATGA+TGG | - | chr4_4:61261581-61261600 | Msa0692620:intron | 25.0% |
! | AATTATGTTCATCAATCTCA+TGG | - | chr4_4:61261671-61261690 | Msa0692620:intron | 25.0% |
!!! | AGTTTTTTTTTTTGTCCGTT+CGG | - | chr4_4:61261808-61261827 | Msa0692620:three_prime_UTR | 25.0% |
!!! | TTGTTGTTTTTTATACCGAA+CGG | + | chr4_4:61261826-61261845 | None:intergenic | 25.0% |
! | AAAATGAAGTTCATGAAACT+TGG | - | chr4_4:61261849-61261868 | Msa0692620:three_prime_UTR | 25.0% |
! | AAATGAAGTTCATGAAACTT+GGG | - | chr4_4:61261850-61261869 | Msa0692620:three_prime_UTR | 25.0% |
!!! | AATACATGTTAGTTTGTGAA+AGG | + | chr4_4:61261957-61261976 | None:intergenic | 25.0% |
! | TGATAAAGACAGAACTAATA+AGG | - | chr4_4:61263021-61263040 | Msa0692620:intron | 25.0% |
! | GTTGAAGGAAAAATCATAAA+AGG | + | chr4_4:61263402-61263421 | None:intergenic | 25.0% |
! | TCTATATTATTAGAGTCTCA+AGG | + | chr4_4:61263615-61263634 | None:intergenic | 25.0% |
!!! | TTTGGTTTGCTAAAAAACAT+GGG | + | chr4_4:61263682-61263701 | None:intergenic | 25.0% |
!! | CAAGTGTTTAGTTTCATTTA+GGG | + | chr4_4:61263709-61263728 | None:intergenic | 25.0% |
!! | ACAAGTGTTTAGTTTCATTT+AGG | + | chr4_4:61263710-61263729 | None:intergenic | 25.0% |
! | AATGAAACTAAACACTTGTT+TGG | - | chr4_4:61263711-61263730 | Msa0692620:CDS | 25.0% |
!!! | GCTATTTTCATAAGTTATTC+GGG | + | chr4_4:61263857-61263876 | None:intergenic | 25.0% |
! | AAGTGGAAAACTTTGATTAT+TGG | - | chr4_4:61263994-61264013 | Msa0692620:CDS | 25.0% |
! | AAACAACATGAGATAATTCT+AGG | - | chr4_4:61264235-61264254 | Msa0692620:CDS | 25.0% |
! | AATTCTTGAAAGTAGAGAAA+AGG | - | chr4_4:61264345-61264364 | Msa0692620:CDS | 25.0% |
! | GAAAAAAAGATAGCAATAAG+AGG | - | chr4_4:61264415-61264434 | Msa0692620:CDS | 25.0% |
! | TAGTTATTACATCTGTGAAA+AGG | + | chr4_4:61264685-61264704 | None:intergenic | 25.0% |
!! | ATGATTTTAAATTGTGGTTG+CGG | + | chr4_4:61264893-61264912 | None:intergenic | 25.0% |
!! | CCATGTATGATTTTAAATTG+TGG | + | chr4_4:61264899-61264918 | None:intergenic | 25.0% |
!! | CCACAATTTAAAATCATACA+TGG | - | chr4_4:61264896-61264915 | Msa0692620:intron | 25.0% |
! | GTATCTTGAATATGAACAAA+AGG | - | chr4_4:61265051-61265070 | Msa0692620:intron | 25.0% |
!! | GATATGAAAGATTTTCACAA+AGG | + | chr4_4:61265101-61265120 | None:intergenic | 25.0% |
! | TGAAAATCTTTCATATCAGA+AGG | - | chr4_4:61265104-61265123 | Msa0692620:intron | 25.0% |
! | AGTAATGAAAATAGATTGAC+AGG | - | chr4_4:61265149-61265168 | Msa0692620:intron | 25.0% |
!! | AGTAAGTATTGTACATTAAC+AGG | - | chr4_4:61265472-61265491 | Msa0692620:five_prime_UTR | 25.0% |
!!! | TTTAACTTTTCAAAGTAGCT+AGG | - | chr4_4:61265537-61265556 | Msa0692620:intron | 25.0% |
! | TTGATATCAGAAATTGATGA+TGG | - | chr4_4:61265565-61265584 | Msa0692620:intron | 25.0% |
!! | ATTGGATTTTCTAATCAAGT+TGG | + | chr4_4:61265755-61265774 | None:intergenic | 25.0% |
! | TTCAATTATGTAGAATAGGA+AGG | + | chr4_4:61265880-61265899 | None:intergenic | 25.0% |
! | TGGTTTCAATTATGTAGAAT+AGG | + | chr4_4:61265884-61265903 | None:intergenic | 25.0% |
! | AAAACAACTTTCTCATTACT+TGG | - | chr4_4:61266096-61266115 | Msa0692620:intron | 25.0% |
!! | TTTTTGTATACTTTACCCAA+AGG | + | chr4_4:61266197-61266216 | None:intergenic | 25.0% |
! | ATGTTATGTTGAAGATTGAA+GGG | + | chr4_4:61267161-61267180 | None:intergenic | 25.0% |
! | TATGTTATGTTGAAGATTGA+AGG | + | chr4_4:61267162-61267181 | None:intergenic | 25.0% |
! | TCATTTCCTAACTATATGAT+TGG | + | chr4_4:61267217-61267236 | None:intergenic | 25.0% |
!! | ATTTTTGTGGAAGACTAAAT+TGG | + | chr4_4:61267390-61267409 | None:intergenic | 25.0% |
!!! | TACTTTGTGTTTCATTTTTG+TGG | + | chr4_4:61267403-61267422 | None:intergenic | 25.0% |
! | TGTTGTAATTAATGAGTAAG+GGG | + | chr4_4:61267439-61267458 | None:intergenic | 25.0% |
! | CTGTTGTAATTAATGAGTAA+GGG | + | chr4_4:61267440-61267459 | None:intergenic | 25.0% |
! | TCTGTTGTAATTAATGAGTA+AGG | + | chr4_4:61267441-61267460 | None:intergenic | 25.0% |
! | TCTTGATATGTAAAATGCTA+GGG | - | chr4_4:61267471-61267490 | Msa0692620:five_prime_UTR | 25.0% |
! | CAGAAATTTGATTCTCAAAA+TGG | - | chr4_4:61267633-61267652 | Msa0692620:intron | 25.0% |
! | TAAAGAGAAGTTTAGAGAAA+AGG | - | chr4_4:61267714-61267733 | Msa0692620:five_prime_UTR | 25.0% |
! | AAAGAGAAGTTTAGAGAAAA+GGG | - | chr4_4:61267715-61267734 | Msa0692620:five_prime_UTR | 25.0% |
! | AAATTGGAAGATCAACATAA+TGG | - | chr4_4:61267821-61267840 | Msa0692620:five_prime_UTR | 25.0% |
AATTAATAGAGTTGAGGAGT+GGG | + | chr4_4:61259366-61259385 | None:intergenic | 30.0% | |
TAATTAATAGAGTTGAGGAG+TGG | + | chr4_4:61259367-61259386 | None:intergenic | 30.0% | |
!! | ACTTTTTGTAGGAGTGTAAA+AGG | - | chr4_4:61259538-61259557 | Msa0692620:intron | 30.0% |
TAGCTCATGATTGTAAATTG+TGG | - | chr4_4:61259652-61259671 | Msa0692620:three_prime_UTR | 30.0% | |
ACATCTTGGATCTAAGAAAA+AGG | - | chr4_4:61259817-61259836 | Msa0692620:three_prime_UTR | 30.0% | |
TACCAATATCTGTTTGTGAA+AGG | - | chr4_4:61259915-61259934 | Msa0692620:three_prime_UTR | 30.0% | |
!! | TTTGTTGTTGAAATCTGACA+TGG | + | chr4_4:61259953-61259972 | None:intergenic | 30.0% |
GAAGAAGAAAATGCACTAAA+TGG | + | chr4_4:61260039-61260058 | None:intergenic | 30.0% | |
ATAAAACCATCCTATCTTCA+TGG | + | chr4_4:61260131-61260150 | None:intergenic | 30.0% | |
TTCCTATATACTTAATGGGA+AGG | - | chr4_4:61260246-61260265 | Msa0692620:three_prime_UTR | 30.0% | |
TTCCTTCCCATTAAGTATAT+AGG | + | chr4_4:61260251-61260270 | None:intergenic | 30.0% | |
AAGGAAGAGAAATAATTGAG+AGG | - | chr4_4:61260265-61260284 | Msa0692620:three_prime_UTR | 30.0% | |
! | TTTTCAGTTGAAACTTGAAG+TGG | + | chr4_4:61260305-61260324 | None:intergenic | 30.0% |
! | TTGTTAAGTCACTTTCAATG+TGG | + | chr4_4:61260388-61260407 | None:intergenic | 30.0% |
CTACTAATTCCATAGATATG+AGG | + | chr4_4:61260536-61260555 | None:intergenic | 30.0% | |
! | TTGGGAGTTTGGAATTAAAT+AGG | + | chr4_4:61260628-61260647 | None:intergenic | 30.0% |
ACATGATTACTTTCACTGAT+GGG | + | chr4_4:61260670-61260689 | None:intergenic | 30.0% | |
!!! | GTTGTGTGTGTATTCTTTTT+TGG | - | chr4_4:61260754-61260773 | Msa0692620:intron | 30.0% |
! | TTGTTGTTACCTATTTCATC+AGG | - | chr4_4:61261133-61261152 | Msa0692620:intron | 30.0% |
TGCAAAATAAATCCAACTTC+AGG | - | chr4_4:61261407-61261426 | Msa0692620:intron | 30.0% | |
AATCAGTCTAGAAAAGATGA+AGG | + | chr4_4:61261539-61261558 | None:intergenic | 30.0% | |
AATTAAAGGGATGGAGTAAA+AGG | + | chr4_4:61261570-61261589 | None:intergenic | 30.0% | |
TACCATAAAACGCAATAACA+TGG | + | chr4_4:61261633-61261652 | None:intergenic | 30.0% | |
TTCCATAAAGTCAAGGTTAA+CGG | + | chr4_4:61261728-61261747 | None:intergenic | 30.0% | |
ACATGTATTCTCATAAATGC+AGG | - | chr4_4:61261968-61261987 | Msa0692620:three_prime_UTR | 30.0% | |
ATTTGTATTACAAGGTCTGA+GGG | + | chr4_4:61262012-61262031 | None:intergenic | 30.0% | |
!! | CATCGTTGATTTGTATTACA+AGG | + | chr4_4:61262020-61262039 | None:intergenic | 30.0% |
TTAAGGACTTAAAACTCAAG+TGG | - | chr4_4:61262063-61262082 | Msa0692620:exon | 30.0% | |
TTGCTATGATTCTAGTGATT+CGG | - | chr4_4:61262186-61262205 | Msa0692620:CDS | 30.0% | |
CAATAGAGTCATTCATTCTA+AGG | + | chr4_4:61262345-61262364 | None:intergenic | 30.0% | |
AATGAATGACTCTATTGAGA+AGG | - | chr4_4:61262348-61262367 | Msa0692620:CDS | 30.0% | |
ATGAATGACTCTATTGAGAA+GGG | - | chr4_4:61262349-61262368 | Msa0692620:CDS | 30.0% | |
ATTCATGCATTCTTGAAAGT+TGG | - | chr4_4:61262404-61262423 | Msa0692620:CDS | 30.0% | |
TAATGTAGCAGTAGTTTGAA+GGG | + | chr4_4:61262446-61262465 | None:intergenic | 30.0% | |
TATAAATGATGATTCTGTGC+AGG | - | chr4_4:61262614-61262633 | Msa0692620:intron | 30.0% | |
! | ATCTTGACATAGATCTTTTC+AGG | - | chr4_4:61262727-61262746 | Msa0692620:intron | 30.0% |
!!! | TCTTTTCAGGTGCATAATAA+TGG | - | chr4_4:61262740-61262759 | Msa0692620:intron | 30.0% |
!! | AGGATTTTGAAGGATAAAGA+AGG | + | chr4_4:61263085-61263104 | None:intergenic | 30.0% |
ATAATAATTCTGGTCTGAAG+AGG | + | chr4_4:61263105-61263124 | None:intergenic | 30.0% | |
TTGAGATCAATCAGAAATGT+AGG | - | chr4_4:61263212-61263231 | Msa0692620:intron | 30.0% | |
AATTGACATCTATCTTAAGG+TGG | - | chr4_4:61263361-61263380 | Msa0692620:CDS | 30.0% | |
!! | GTTTGGTTTGCTAAAAAACA+TGG | + | chr4_4:61263683-61263702 | None:intergenic | 30.0% |
AGACTATTCGAGAAAACTTA+CGG | - | chr4_4:61263775-61263794 | Msa0692620:CDS | 30.0% | |
TTGAAGTTGAATGCATAAAC+AGG | - | chr4_4:61264027-61264046 | Msa0692620:intron | 30.0% | |
!! | TCTTTAGGACAAGAGTTTAA+TGG | - | chr4_4:61264301-61264320 | Msa0692620:CDS | 30.0% |
TCTACTTTCAAGAATTTGAG+TGG | + | chr4_4:61264341-61264360 | None:intergenic | 30.0% | |
TGCAAATTTAGCATTAGACT+TGG | - | chr4_4:61264393-61264412 | Msa0692620:CDS | 30.0% | |
!!! | GCCCTTCTTATGATTTTTTT+AGG | + | chr4_4:61264526-61264545 | None:intergenic | 30.0% |
ATCAGAACATAGCATGAAAA+AGG | - | chr4_4:61264555-61264574 | Msa0692620:intron | 30.0% | |
AAGCTACAAACTGCATATAA+GGG | + | chr4_4:61264645-61264664 | None:intergenic | 30.0% | |
TTTCATTGTTCATGTTTGAG+AGG | - | chr4_4:61264772-61264791 | Msa0692620:CDS | 30.0% | |
AAGACAATATGTATTGCTAG+AGG | - | chr4_4:61264803-61264822 | Msa0692620:exon | 30.0% | |
! | TGATACCTTCAATGACATTT+TGG | + | chr4_4:61264941-61264960 | None:intergenic | 30.0% |
! | TCTATTTTCATTACTCGCAT+AGG | + | chr4_4:61265144-61265163 | None:intergenic | 30.0% |
TGATCAGCTAATAAAACTGT+TGG | + | chr4_4:61265451-61265470 | None:intergenic | 30.0% | |
GAATAATATTGCAAAGGAGT+TGG | + | chr4_4:61265499-61265518 | None:intergenic | 30.0% | |
!!! | TTGATTTTTTAAGTCCCTGA+TGG | - | chr4_4:61265598-61265617 | Msa0692620:intron | 30.0% |
ATTGCAACTGTGAATTTCAT+TGG | + | chr4_4:61265773-61265792 | None:intergenic | 30.0% | |
! | TGTGTTTCTTTTGTAGCAAA+TGG | + | chr4_4:61265904-61265923 | None:intergenic | 30.0% |
AAAGCTATTCAGAGTAACTA+TGG | + | chr4_4:61266025-61266044 | None:intergenic | 30.0% | |
TTATCAGAATCAGAAGCAAA+TGG | - | chr4_4:61266066-61266085 | Msa0692620:intron | 30.0% | |
TATCAGAATCAGAAGCAAAT+GGG | - | chr4_4:61266067-61266086 | Msa0692620:intron | 30.0% | |
CATTACTTGGCATTATTTAC+AGG | - | chr4_4:61266109-61266128 | Msa0692620:intron | 30.0% | |
! | AACAATTGGCATTTTTGACA+TGG | - | chr4_4:61266265-61266284 | Msa0692620:intron | 30.0% |
TAAGTGTGCTAACTAACAAT+GGG | + | chr4_4:61266292-61266311 | None:intergenic | 30.0% | |
TTAAGTGTGCTAACTAACAA+TGG | + | chr4_4:61266293-61266312 | None:intergenic | 30.0% | |
!! | AAATTGACTTGATGTTGGTT+TGG | + | chr4_4:61267084-61267103 | None:intergenic | 30.0% |
!! | ATGTGAAATTGACTTGATGT+TGG | + | chr4_4:61267089-61267108 | None:intergenic | 30.0% |
TGTATAGTGAAGACTCAATA+TGG | - | chr4_4:61267342-61267361 | Msa0692620:intron | 30.0% | |
! | ATGGTCTTTCACAATTTTCT+TGG | - | chr4_4:61267361-61267380 | Msa0692620:intron | 30.0% |
GTCTTGATATGTAAAATGCT+AGG | - | chr4_4:61267470-61267489 | Msa0692620:five_prime_UTR | 30.0% | |
!!! | TAGGGACTAGTTTGAATTTT+AGG | - | chr4_4:61267489-61267508 | Msa0692620:five_prime_UTR | 30.0% |
! | GTCCGTAAGAAAATTTTGAA+GGG | - | chr4_4:61267522-61267541 | Msa0692620:five_prime_UTR | 30.0% |
!! | AAAATTTTGAAGGGCCAAAT+TGG | - | chr4_4:61267531-61267550 | Msa0692620:five_prime_UTR | 30.0% |
!! | AAATTTTGAAGGGCCAAATT+GGG | - | chr4_4:61267532-61267551 | Msa0692620:five_prime_UTR | 30.0% |
! | ATGTTGATCTTCCAATTTTC+CGG | + | chr4_4:61267819-61267838 | None:intergenic | 30.0% |
TTTATCAACATCGATCGAAT+TGG | - | chr4_4:61267850-61267869 | Msa0692620:five_prime_UTR | 30.0% | |
TGAGAAAAAGAGAGGAGAAT+AGG | + | chr4_4:61258918-61258937 | None:intergenic | 35.0% | |
ATACATGAACATGTGATCGA+AGG | + | chr4_4:61258990-61259009 | None:intergenic | 35.0% | |
!! | TGAATTATCACTTTTGGCAG+AGG | - | chr4_4:61259430-61259449 | Msa0692620:intron | 35.0% |
GGAAAATTGGAGAAAAAGGT+AGG | - | chr4_4:61259457-61259476 | Msa0692620:intron | 35.0% | |
ATTATGTGGACATTTGCTTC+TGG | + | chr4_4:61259581-61259600 | None:intergenic | 35.0% | |
! | CGCTGCTAACTTTTATATTG+CGG | + | chr4_4:61259737-61259756 | None:intergenic | 35.0% |
TTCATGTGAGAGTTACATCT+TGG | - | chr4_4:61259803-61259822 | Msa0692620:three_prime_UTR | 35.0% | |
TGACTCAGATGCAATCTATT+TGG | - | chr4_4:61259840-61259859 | Msa0692620:three_prime_UTR | 35.0% | |
AAAGCAAAAACCAGTGTTTG+TGG | + | chr4_4:61259896-61259915 | None:intergenic | 35.0% | |
GTCCTTTCACAAACAGATAT+TGG | + | chr4_4:61259920-61259939 | None:intergenic | 35.0% | |
TTGAAATCTGACATGGAGTA+TGG | + | chr4_4:61259946-61259965 | None:intergenic | 35.0% | |
GAGGAAATGATGTTAGTGAT+AGG | + | chr4_4:61260001-61260020 | None:intergenic | 35.0% | |
!! | CTATCTTCATGGTTTGTTTG+AGG | + | chr4_4:61260120-61260139 | None:intergenic | 35.0% |
CTCAAACAAACCATGAAGAT+AGG | - | chr4_4:61260118-61260137 | Msa0692620:three_prime_UTR | 35.0% | |
AACAAACCATGAAGATAGGA+TGG | - | chr4_4:61260122-61260141 | Msa0692620:three_prime_UTR | 35.0% | |
TGAGAAGAAGAGAGAAACAA+AGG | - | chr4_4:61260198-61260217 | Msa0692620:three_prime_UTR | 35.0% | |
GTCACTTATCCTCATATCTA+TGG | - | chr4_4:61260524-61260543 | Msa0692620:intron | 35.0% | |
! | AGTAGAGTACATTCTCGTTT+TGG | - | chr4_4:61260551-61260570 | Msa0692620:intron | 35.0% |
GGTAAAGGAATAAGCATGTT+GGG | + | chr4_4:61260646-61260665 | None:intergenic | 35.0% | |
TGGTAAAGGAATAAGCATGT+TGG | + | chr4_4:61260647-61260666 | None:intergenic | 35.0% | |
CACATGATTACTTTCACTGA+TGG | + | chr4_4:61260671-61260690 | None:intergenic | 35.0% | |
GAAAGCAATTATGTTTGAGG+CGG | - | chr4_4:61260803-61260822 | Msa0692620:intron | 35.0% | |
! | CTAGAGATAAAGTTTCTGGA+AGG | - | chr4_4:61260938-61260957 | Msa0692620:intron | 35.0% |
! | TCTGGAAGGATTTTATGACT+AGG | - | chr4_4:61260952-61260971 | Msa0692620:intron | 35.0% |
! | CTGGAAGGATTTTATGACTA+GGG | - | chr4_4:61260953-61260972 | Msa0692620:intron | 35.0% |
! | GTAACTTTGGAAGTAACATC+AGG | + | chr4_4:61261192-61261211 | None:intergenic | 35.0% |
CTCTCTAGTAGTAGTAACTT+TGG | + | chr4_4:61261205-61261224 | None:intergenic | 35.0% | |
AATGGCATGATATCATTCCT+TGG | - | chr4_4:61261500-61261519 | Msa0692620:intron | 35.0% | |
! | TGCCATGTTATTGCGTTTTA+TGG | - | chr4_4:61261628-61261647 | Msa0692620:intron | 35.0% |
AATCCAAAGGGTTATCTAGT+AGG | + | chr4_4:61261697-61261716 | None:intergenic | 35.0% | |
ACGGAAAAAGTGAATCCAAA+GGG | + | chr4_4:61261709-61261728 | None:intergenic | 35.0% | |
AACGGAAAAAGTGAATCCAA+AGG | + | chr4_4:61261710-61261729 | None:intergenic | 35.0% | |
TTCCGTTAACCTTGACTTTA+TGG | - | chr4_4:61261723-61261742 | Msa0692620:three_prime_UTR | 35.0% | |
ATCTGTGGTGGTTTAATCTA+AGG | - | chr4_4:61261747-61261766 | Msa0692620:three_prime_UTR | 35.0% | |
!! | TGTTCAGTGTAGAAAGTATC+TGG | + | chr4_4:61261882-61261901 | None:intergenic | 35.0% |
GATTTGTATTACAAGGTCTG+AGG | + | chr4_4:61262013-61262032 | None:intergenic | 35.0% | |
! | TGTTACTTATCTGCTACACA+AGG | - | chr4_4:61262038-61262057 | Msa0692620:three_prime_UTR | 35.0% |
! | ATCTGCTACACAAGGTATTA+AGG | - | chr4_4:61262046-61262065 | Msa0692620:three_prime_UTR | 35.0% |
AATCATAGCAAAGCCTTTGT+AGG | + | chr4_4:61262177-61262196 | None:intergenic | 35.0% | |
!!! | CTCTGTGCTAAGTTTTGTTA+TGG | - | chr4_4:61262262-61262281 | Msa0692620:CDS | 35.0% |
! | GTCATTCATTCTAAGGAACT+TGG | + | chr4_4:61262338-61262357 | None:intergenic | 35.0% |
ATTGAGAAGGGAAACTTTGT+AGG | - | chr4_4:61262361-61262380 | Msa0692620:CDS | 35.0% | |
ATGCATTCTTGAAAGTTGGA+AGG | - | chr4_4:61262408-61262427 | Msa0692620:CDS | 35.0% | |
GTAATGTAGCAGTAGTTTGA+AGG | + | chr4_4:61262447-61262466 | None:intergenic | 35.0% | |
!!! | TGCTGTTTTTTTGTGTAACC+GGG | + | chr4_4:61262666-61262685 | None:intergenic | 35.0% |
!!! | GTGCTGTTTTTTTGTGTAAC+CGG | + | chr4_4:61262667-61262686 | None:intergenic | 35.0% |
TTATTAAGCTTCGTGATTCC+CGG | + | chr4_4:61262840-61262859 | None:intergenic | 35.0% | |
ACGAAGCTTAATAAAAGCTC+AGG | - | chr4_4:61262846-61262865 | Msa0692620:intron | 35.0% | |
TTCTGTCTTTATCACTGATG+AGG | + | chr4_4:61263015-61263034 | None:intergenic | 35.0% | |
TGGAAACTTTCTTGAAGCTT+TGG | - | chr4_4:61263150-61263169 | Msa0692620:intron | 35.0% | |
GGCAATTGACATCTATCTTA+AGG | - | chr4_4:61263358-61263377 | Msa0692620:CDS | 35.0% | |
TTTGCTAAAAAACATGGGAC+TGG | + | chr4_4:61263677-61263696 | None:intergenic | 35.0% | |
! | AGTTTCATTTAGGGTGTGTT+TGG | + | chr4_4:61263700-61263719 | None:intergenic | 35.0% |
TTAATTGCCTATCCTGATTC+TGG | + | chr4_4:61263976-61263995 | None:intergenic | 35.0% | |
AATCAGGATAGGCAATTAAG+TGG | - | chr4_4:61263977-61263996 | Msa0692620:CDS | 35.0% | |
TCTACTTTGAACAGGAGAAA+GGG | - | chr4_4:61264182-61264201 | Msa0692620:CDS | 35.0% | |
!!! | TTGTTTTAGCAGTTTGTGAC+TGG | + | chr4_4:61264221-61264240 | None:intergenic | 35.0% |
AGCCAAAGCAAACAATCTTT+AGG | - | chr4_4:61264286-61264305 | Msa0692620:CDS | 35.0% | |
GTCCTAAAGATTGTTTGCTT+TGG | + | chr4_4:61264291-61264310 | None:intergenic | 35.0% | |
TCACCACAGACATAAAAGAT+TGG | - | chr4_4:61264369-61264388 | Msa0692620:CDS | 35.0% | |
! | CATCCAATCTTTTATGTCTG+TGG | + | chr4_4:61264375-61264394 | None:intergenic | 35.0% |
GAAGCTACAAACTGCATATA+AGG | + | chr4_4:61264646-61264665 | None:intergenic | 35.0% | |
ATTGTTCATGTTTGAGAGGA+AGG | - | chr4_4:61264776-61264795 | Msa0692620:CDS | 35.0% | |
AGAGGACATATCAATTGCAT+AGG | - | chr4_4:61264821-61264840 | Msa0692620:five_prime_UTR | 35.0% | |
!!! | CCTTCAATGACATTTTGGTT+TGG | + | chr4_4:61264936-61264955 | None:intergenic | 35.0% |
CCAAACCAAAATGTCATTGA+AGG | - | chr4_4:61264933-61264952 | Msa0692620:intron | 35.0% | |
GAAAATAGATTGACAGGTGT+AGG | - | chr4_4:61265155-61265174 | Msa0692620:intron | 35.0% | |
ATTCACCAATGACAACTCTT+TGG | - | chr4_4:61265234-61265253 | Msa0692620:five_prime_UTR | 35.0% | |
GACTCACATGTTTCAATCTT+TGG | + | chr4_4:61265348-61265367 | None:intergenic | 35.0% | |
!!! | CACTGTTTTTGAGATCAAAG+AGG | - | chr4_4:61265367-61265386 | Msa0692620:five_prime_UTR | 35.0% |
GCAGGTAAAAATTGAAGAGA+AGG | - | chr4_4:61265396-61265415 | Msa0692620:five_prime_UTR | 35.0% | |
! | AGTGTGAAGACCTTTTGTTA+AGG | - | chr4_4:61265699-61265718 | Msa0692620:intron | 35.0% |
! | GTGTGAAGACCTTTTGTTAA+GGG | - | chr4_4:61265700-61265719 | Msa0692620:intron | 35.0% |
! | TGTGAAGACCTTTTGTTAAG+GGG | - | chr4_4:61265701-61265720 | Msa0692620:intron | 35.0% |
!! | ATCAAGTTGGTAACTGCATT+TGG | + | chr4_4:61265742-61265761 | None:intergenic | 35.0% |
!! | ATTGCTTTAAAGCGACTACT+TGG | - | chr4_4:61265791-61265810 | Msa0692620:intron | 35.0% |
AATCCAGTCTACAATTCCTT+TGG | - | chr4_4:61266178-61266197 | Msa0692620:intron | 35.0% | |
ATCCAGTCTACAATTCCTTT+GGG | - | chr4_4:61266179-61266198 | Msa0692620:intron | 35.0% | |
AACCTTTCCCACTAATTACA+AGG | - | chr4_4:61266220-61266239 | Msa0692620:intron | 35.0% | |
!!! | GGAGATGGTATTAGTTTTGA+GGG | + | chr4_4:61266449-61266468 | None:intergenic | 35.0% |
!!! | AGGAGATGGTATTAGTTTTG+AGG | + | chr4_4:61266450-61266469 | None:intergenic | 35.0% |
! | GCTCAGACTTTTGTAAAGAT+AGG | + | chr4_4:61266500-61266519 | None:intergenic | 35.0% |
CTAAGGAAAAAGGTTCCTTT+AGG | + | chr4_4:61266544-61266563 | None:intergenic | 35.0% | |
!!! | AACCTTTTTCCTTAGCCTTA+GGG | - | chr4_4:61266549-61266568 | Msa0692620:intron | 35.0% |
AAACTGTTATCTTCTGTGCT+GGG | + | chr4_4:61266575-61266594 | None:intergenic | 35.0% | |
AAAACTGTTATCTTCTGTGC+TGG | + | chr4_4:61266576-61266595 | None:intergenic | 35.0% | |
! | GGATCAAATGCAAACTTGTT+GGG | + | chr4_4:61266605-61266624 | None:intergenic | 35.0% |
TGGATCAAATGCAAACTTGT+TGG | + | chr4_4:61266606-61266625 | None:intergenic | 35.0% | |
TGCATTTGATCCATTAAGAG+AGG | - | chr4_4:61266613-61266632 | Msa0692620:intron | 35.0% | |
!!! | AAGAAAGTTGTTTTGGCTGA+TGG | + | chr4_4:61267028-61267047 | None:intergenic | 35.0% |
!! | GGTGTTGAAGAAAGTTGTTT+TGG | + | chr4_4:61267035-61267054 | None:intergenic | 35.0% |
TAAGATGGTGTAGTTGAATG+TGG | + | chr4_4:61267115-61267134 | None:intergenic | 35.0% | |
CAGTAGTGTATAGAGTAAGA+TGG | + | chr4_4:61267130-61267149 | None:intergenic | 35.0% | |
! | GTCTTTCACAATTTTCTTGG+AGG | - | chr4_4:61267364-61267383 | Msa0692620:intron | 35.0% |
! | GGTCCGTAAGAAAATTTTGA+AGG | - | chr4_4:61267521-61267540 | Msa0692620:five_prime_UTR | 35.0% |
! | GGCCCTTCAAAATTTTCTTA+CGG | + | chr4_4:61267527-61267546 | None:intergenic | 35.0% |
TTAAGAGTGAAGACCCAATT+TGG | + | chr4_4:61267548-61267567 | None:intergenic | 35.0% | |
! | TTTAGAGAAAAGGGCATACA+GGG | - | chr4_4:61267724-61267743 | Msa0692620:five_prime_UTR | 35.0% |
! | TGTTGATCTTCCAATTTTCC+GGG | + | chr4_4:61267818-61267837 | None:intergenic | 35.0% |
TCACAGACTGAGAAAAAGAG+AGG | + | chr4_4:61258926-61258945 | None:intergenic | 40.0% | |
! | TCTCTTTTTCTCAGTCTGTG+AGG | - | chr4_4:61258925-61258944 | Msa0692620:intron | 40.0% |
ATAGAGAGATAAACATGGGG+TGG | - | chr4_4:61259309-61259328 | Msa0692620:intron | 40.0% | |
AGTGGGAAGTCAAAAAAGGA+AGG | + | chr4_4:61259349-61259368 | None:intergenic | 40.0% | |
!! | ATCACTTTTGGCAGAGGATA+AGG | - | chr4_4:61259436-61259455 | Msa0692620:intron | 40.0% |
TGGCAGAGGATAAGGAAAAT+TGG | - | chr4_4:61259444-61259463 | Msa0692620:intron | 40.0% | |
TTAGCAGCGTATTGTAATCG+TGG | - | chr4_4:61259748-61259767 | Msa0692620:three_prime_UTR | 40.0% | |
AATGAACAGTGAAGTGAGCA+TGG | - | chr4_4:61259975-61259994 | Msa0692620:three_prime_UTR | 40.0% | |
GATATGAGGATAAGTGACAC+TGG | + | chr4_4:61260522-61260541 | None:intergenic | 40.0% | |
GAATAAGCATGTTGGGAGTT+TGG | + | chr4_4:61260639-61260658 | None:intergenic | 40.0% | |
TGATTACTTTCACTGATGGG+TGG | + | chr4_4:61260667-61260686 | None:intergenic | 40.0% | |
CAGGCTAGAGATAAAGTTTC+TGG | - | chr4_4:61260934-61260953 | Msa0692620:intron | 40.0% | |
AAAGAAAAAACAGGGAGCTG+AGG | + | chr4_4:61261017-61261036 | None:intergenic | 40.0% | |
GTGTCTGTTCCTGATGAAAT+AGG | + | chr4_4:61261145-61261164 | None:intergenic | 40.0% | |
TGATGTCGTCACTTCATCAA+TGG | + | chr4_4:61261331-61261350 | None:intergenic | 40.0% | |
TATCATGCCATTGTGACTGT+CGG | + | chr4_4:61261492-61261511 | None:intergenic | 40.0% | |
AAGGTAGAAGTAGAAGTCCA+AGG | + | chr4_4:61261520-61261539 | None:intergenic | 40.0% | |
CCACAGATTCCATAAAGTCA+AGG | + | chr4_4:61261735-61261754 | None:intergenic | 40.0% | |
CCTTGACTTTATGGAATCTG+TGG | - | chr4_4:61261732-61261751 | Msa0692620:three_prime_UTR | 40.0% | |
TGACTTTATGGAATCTGTGG+TGG | - | chr4_4:61261735-61261754 | Msa0692620:three_prime_UTR | 40.0% | |
AGTTCATGAAACTTGGGACA+AGG | - | chr4_4:61261856-61261875 | Msa0692620:three_prime_UTR | 40.0% | |
TTTGCCCTTCTTCCAAAATG+TGG | - | chr4_4:61262148-61262167 | Msa0692620:CDS | 40.0% | |
!! | GAGTCCACATTTTGGAAGAA+GGG | + | chr4_4:61262155-61262174 | None:intergenic | 40.0% |
! | CTTTGTAGGAGTCCACATTT+TGG | + | chr4_4:61262163-61262182 | None:intergenic | 40.0% |
CAAAATGTGGACTCCTACAA+AGG | - | chr4_4:61262161-61262180 | Msa0692620:CDS | 40.0% | |
!! | TGATTCGGAGAGTTTTACTG+TGG | - | chr4_4:61262201-61262220 | Msa0692620:CDS | 40.0% |
AGCTTCATGATATACCTGGA+GGG | - | chr4_4:61262224-61262243 | Msa0692620:CDS | 40.0% | |
GTAGTTTGAAGGGTTGCAAT+GGG | + | chr4_4:61262436-61262455 | None:intergenic | 40.0% | |
AGTAGTTTGAAGGGTTGCAA+TGG | + | chr4_4:61262437-61262456 | None:intergenic | 40.0% | |
ATGATTCTGTGCAGGTGAAA+TGG | - | chr4_4:61262622-61262641 | Msa0692620:intron | 40.0% | |
!!! | TTTTTTTGTGTAACCGGGTC+TGG | + | chr4_4:61262661-61262680 | None:intergenic | 40.0% |
AAAGCTTCACCAATAAGCTG+TGG | + | chr4_4:61262792-61262811 | None:intergenic | 40.0% | |
! | TGGTCTGAAGAGGATTTTGA+AGG | + | chr4_4:61263095-61263114 | None:intergenic | 40.0% |
!! | AGAGTTAGTTCTAGCAGTGT+TGG | - | chr4_4:61263130-61263149 | Msa0692620:intron | 40.0% |
CATAGACTCCTATCTTCAAG+TGG | - | chr4_4:61263241-61263260 | Msa0692620:intron | 40.0% | |
TCTAGCAACCACTTGAAGAT+AGG | + | chr4_4:61263252-61263271 | None:intergenic | 40.0% | |
AGACCACAACGATCTATACA+AGG | - | chr4_4:61263337-61263356 | Msa0692620:CDS | 40.0% | |
TTGCCTTGTATAGATCGTTG+TGG | + | chr4_4:61263343-61263362 | None:intergenic | 40.0% | |
TCCTTCAACTAGAGTCAGAT+TGG | - | chr4_4:61263413-61263432 | Msa0692620:CDS | 40.0% | |
ACCAATCTGACTCTAGTTGA+AGG | + | chr4_4:61263417-61263436 | None:intergenic | 40.0% | |
CTACGCAAATCTTTGACAAC+AGG | + | chr4_4:61263511-61263530 | None:intergenic | 40.0% | |
CTGTTGTCAAAGATTTGCGT+AGG | - | chr4_4:61263509-61263528 | Msa0692620:CDS | 40.0% | |
ATAGTCTCTTGCTTGAATGC+TGG | - | chr4_4:61263567-61263586 | Msa0692620:CDS | 40.0% | |
TAAAAAACATGGGACTGGAC+TGG | + | chr4_4:61263672-61263691 | None:intergenic | 40.0% | |
AAGTTATTCGGGAGAGCTTA+TGG | + | chr4_4:61263846-61263865 | None:intergenic | 40.0% | |
ATCAGAACAACACCAGAATC+AGG | - | chr4_4:61263961-61263980 | Msa0692620:CDS | 40.0% | |
AACAACACCAGAATCAGGAT+AGG | - | chr4_4:61263966-61263985 | Msa0692620:CDS | 40.0% | |
TTATCTGCCTTACTCAGATC+AGG | + | chr4_4:61264058-61264077 | None:intergenic | 40.0% | |
CAGATAAGAAGAGACTGTGT+GGG | - | chr4_4:61264071-61264090 | Msa0692620:intron | 40.0% | |
!! | GTACTTCTGGTGTCAGTTTT+TGG | + | chr4_4:61264108-61264127 | None:intergenic | 40.0% |
AGCTGCACTACAGTTCTTAA+TGG | + | chr4_4:61264160-61264179 | None:intergenic | 40.0% | |
CTCTACTTTGAACAGGAGAA+AGG | - | chr4_4:61264181-61264200 | Msa0692620:CDS | 40.0% | |
TTGAAGAGACAGAGTCAGAA+AGG | - | chr4_4:61264446-61264465 | Msa0692620:CDS | 40.0% | |
TGAAGAGACAGAGTCAGAAA+GGG | - | chr4_4:61264447-61264466 | Msa0692620:CDS | 40.0% | |
AAGTAGTTCGAGCTACAAGT+TGG | - | chr4_4:61264489-61264508 | Msa0692620:CDS | 40.0% | |
CTACAAACTGCATATAAGGG+AGG | + | chr4_4:61264642-61264661 | None:intergenic | 40.0% | |
TTCACAGGAGAGACAGTATA+GGG | + | chr4_4:61264714-61264733 | None:intergenic | 40.0% | |
TCTCCTGTGAAGTTGTAACT+AGG | - | chr4_4:61264723-61264742 | Msa0692620:intron | 40.0% | |
CTCCTGTGAAGTTGTAACTA+GGG | - | chr4_4:61264724-61264743 | Msa0692620:intron | 40.0% | |
ATCCCTAGTTACAACTTCAC+AGG | + | chr4_4:61264729-61264748 | None:intergenic | 40.0% | |
TTAAATTGTGGTTGCGGTTG+TGG | + | chr4_4:61264887-61264906 | None:intergenic | 40.0% | |
AATAGATTGACAGGTGTAGG+AGG | - | chr4_4:61265158-61265177 | Msa0692620:intron | 40.0% | |
TCTCAACTCTTCTATTGCGT+AGG | + | chr4_4:61265202-61265221 | None:intergenic | 40.0% | |
CATCCTAAATAAACTGCTCC+AGG | - | chr4_4:61265257-61265276 | Msa0692620:five_prime_UTR | 40.0% | |
TTTATACCATGCACGACCTT+TGG | + | chr4_4:61265314-61265333 | None:intergenic | 40.0% | |
AGGTCGTGCATGGTATAAAT+AGG | - | chr4_4:61265315-61265334 | Msa0692620:five_prime_UTR | 40.0% | |
AGATCAAAGAGGATGTTTGC+AGG | - | chr4_4:61265378-61265397 | Msa0692620:five_prime_UTR | 40.0% | |
CTAGTAAGCCTGAAATGACT+GGG | - | chr4_4:61265652-61265671 | Msa0692620:intron | 40.0% | |
TAGTAAGCCTGAAATGACTG+GGG | - | chr4_4:61265653-61265672 | Msa0692620:intron | 40.0% | |
! | AAGACCTTTTGTTAAGGGGT+TGG | - | chr4_4:61265705-61265724 | Msa0692620:intron | 40.0% |
ATACTCCCTCTCAACATCAA+GGG | + | chr4_4:61265825-61265844 | None:intergenic | 40.0% | |
AATACTCCCTCTCAACATCA+AGG | + | chr4_4:61265826-61265845 | None:intergenic | 40.0% | |
ATAGGAAGGTAACCATGATC+TGG | + | chr4_4:61265866-61265885 | None:intergenic | 40.0% | |
CGTGCTATGCTATACATCAA+AGG | - | chr4_4:61266146-61266165 | Msa0692620:intron | 40.0% | |
TACCCAAAGGAATTGTAGAC+TGG | + | chr4_4:61266184-61266203 | None:intergenic | 40.0% | |
TGCCTTGTAATTAGTGGGAA+AGG | + | chr4_4:61266225-61266244 | None:intergenic | 40.0% | |
TCCCACTAATTACAAGGCAA+AGG | - | chr4_4:61266226-61266245 | Msa0692620:intron | 40.0% | |
CCCTTTGCCTTGTAATTAGT+GGG | + | chr4_4:61266230-61266249 | None:intergenic | 40.0% | |
CCCACTAATTACAAGGCAAA+GGG | - | chr4_4:61266227-61266246 | Msa0692620:intron | 40.0% | |
CCACTAATTACAAGGCAAAG+GGG | - | chr4_4:61266228-61266247 | Msa0692620:intron | 40.0% | |
TAATTACAAGGCAAAGGGGA+TGG | - | chr4_4:61266232-61266251 | Msa0692620:intron | 40.0% | |
AATTACAAGGCAAAGGGGAT+GGG | - | chr4_4:61266233-61266252 | Msa0692620:intron | 40.0% | |
GACTGTGAGATTGCAATTTG+AGG | + | chr4_4:61266399-61266418 | None:intergenic | 40.0% | |
AATTGCAATCTCACAGTCTC+TGG | - | chr4_4:61266401-61266420 | Msa0692620:intron | 40.0% | |
AAGAAGTTGAAGGAAGGAGA+TGG | + | chr4_4:61266464-61266483 | None:intergenic | 40.0% | |
TCAAGCTGAGAAGAAGTTGA+AGG | + | chr4_4:61266474-61266493 | None:intergenic | 40.0% | |
ATCTGCCTTCAACAACCTAA+AGG | - | chr4_4:61266526-61266545 | Msa0692620:intron | 40.0% | |
!! | AGGTTCCTTTAGGTTGTTGA+AGG | + | chr4_4:61266534-61266553 | None:intergenic | 40.0% |
!! | GAACCTTTTTCCTTAGCCTT+AGG | - | chr4_4:61266548-61266567 | Msa0692620:intron | 40.0% |
! | ATAACAGGTTGAAGCTCAAG+CGG | + | chr4_4:61266781-61266800 | None:intergenic | 40.0% |
CTTGAGCTTCAACCTGTTAT+TGG | - | chr4_4:61266781-61266800 | Msa0692620:intron | 40.0% | |
CGTCAATGTCTTCCAATAAC+AGG | + | chr4_4:61266796-61266815 | None:intergenic | 40.0% | |
TCAAGGGCAGAGGTAAATTA+AGG | - | chr4_4:61266954-61266973 | Msa0692620:intron | 40.0% | |
CAAGGGCAGAGGTAAATTAA+GGG | - | chr4_4:61266955-61266974 | Msa0692620:intron | 40.0% | |
AAGGGCAGAGGTAAATTAAG+GGG | - | chr4_4:61266956-61266975 | Msa0692620:intron | 40.0% | |
TTGGTATATGCAGCATGATG+TGG | + | chr4_4:61267065-61267084 | None:intergenic | 40.0% | |
ATGAGTAAGGGGAAATGTGA+GGG | + | chr4_4:61267428-61267447 | None:intergenic | 40.0% | |
AATGAGTAAGGGGAAATGTG+AGG | + | chr4_4:61267429-61267448 | None:intergenic | 40.0% | |
TGCAGTATGATATTAGTGCG+AGG | + | chr4_4:61267601-61267620 | None:intergenic | 40.0% | |
! | GTTTAGAGAAAAGGGCATAC+AGG | - | chr4_4:61267723-61267742 | Msa0692620:five_prime_UTR | 40.0% |
GAGGAGTGGGAAGTCAAAAA+AGG | + | chr4_4:61259353-61259372 | None:intergenic | 45.0% | |
! | CATCTAGCTTCCCTCAATTG+CGG | + | chr4_4:61259685-61259704 | None:intergenic | 45.0% |
AATTGAGAGGACCATAGCAG+TGG | - | chr4_4:61260278-61260297 | Msa0692620:three_prime_UTR | 45.0% | |
! | CTTTCACTGATGGGTGGTAA+AGG | + | chr4_4:61260661-61260680 | None:intergenic | 45.0% |
! | GCACAGTGCATTTTCTGCTA+TGG | - | chr4_4:61260702-61260721 | Msa0692620:intron | 45.0% |
AGCTGAGGAAAACAGGAAAG+TGG | + | chr4_4:61261002-61261021 | None:intergenic | 45.0% | |
TCATCAGGAACAGACACATG+AGG | - | chr4_4:61261148-61261167 | Msa0692620:intron | 45.0% | |
TCTAAGCAGTGCTGTCATCT+GGG | - | chr4_4:61261264-61261283 | Msa0692620:intron | 45.0% | |
CTGGGAATGATGGCATAAAC+TGG | - | chr4_4:61261282-61261301 | Msa0692620:intron | 45.0% | |
GTGACTTTCACACCTGAAGT+TGG | + | chr4_4:61261422-61261441 | None:intergenic | 45.0% | |
TGGCCTACTAGATAACCCTT+TGG | - | chr4_4:61261691-61261710 | Msa0692620:intron | 45.0% | |
GAACAGCCTTCTGAATTTGC+AGG | - | chr4_4:61261769-61261788 | Msa0692620:three_prime_UTR | 45.0% | |
TCAGTGCCTGCAAATTCAGA+AGG | + | chr4_4:61261778-61261797 | None:intergenic | 45.0% | |
TCTACACTGAACAAGCTACC+AGG | - | chr4_4:61261889-61261908 | Msa0692620:three_prime_UTR | 45.0% | |
!! | GGAGTCCACATTTTGGAAGA+AGG | + | chr4_4:61262156-61262175 | None:intergenic | 45.0% |
GTGGAGCTTCATGATATACC+TGG | - | chr4_4:61262220-61262239 | Msa0692620:CDS | 45.0% | |
GAGCTTCATGATATACCTGG+AGG | - | chr4_4:61262223-61262242 | Msa0692620:CDS | 45.0% | |
GCTTCATGATATACCTGGAG+GGG | - | chr4_4:61262225-61262244 | Msa0692620:CDS | 45.0% | |
CTACTGCTACATTACCAGAG+TGG | - | chr4_4:61262452-61262471 | Msa0692620:CDS | 45.0% | |
!! | TTGTTTCTGACCTGTTGCGA+GGG | + | chr4_4:61262538-61262557 | None:intergenic | 45.0% |
!! | TTTGTTTCTGACCTGTTGCG+AGG | + | chr4_4:61262539-61262558 | None:intergenic | 45.0% |
ACCATTCTGTCCCAAAGGAT+TGG | - | chr4_4:61262685-61262704 | Msa0692620:intron | 45.0% | |
!! | ACCAATCCTTTGGGACAGAA+TGG | + | chr4_4:61262689-61262708 | None:intergenic | 45.0% |
ATTCTGTCCCAAAGGATTGG+TGG | - | chr4_4:61262688-61262707 | Msa0692620:intron | 45.0% | |
CTTTGCATGTCTATGCATGC+CGG | - | chr4_4:61262808-61262827 | Msa0692620:intron | 45.0% | |
GAGAGCAAGCTTACAGTTTG+AGG | - | chr4_4:61263043-61263062 | Msa0692620:intron | 45.0% | |
AGCAAGCTTACAGTTTGAGG+AGG | - | chr4_4:61263046-61263065 | Msa0692620:intron | 45.0% | |
! | CTTTGGAAAAGAATGTCCCC+TGG | - | chr4_4:61263167-61263186 | Msa0692620:intron | 45.0% |
TGGTCTACTCTTGCAATGCT+CGG | + | chr4_4:61263323-61263342 | None:intergenic | 45.0% | |
!! | GACTGGACTGGCCAAATTAT+AGG | + | chr4_4:61263660-61263679 | None:intergenic | 45.0% |
GCAGATAAGAAGAGACTGTG+TGG | - | chr4_4:61264070-61264089 | Msa0692620:intron | 45.0% | |
! | AAACTGACACCAGAAGTACG+TGG | - | chr4_4:61264109-61264128 | Msa0692620:intron | 45.0% |
!! | TGGCAGAAGCTCGTTTTTGA+CGG | + | chr4_4:61264140-61264159 | None:intergenic | 45.0% |
GCAGCTTCTCTACTTTGAAC+AGG | - | chr4_4:61264174-61264193 | Msa0692620:CDS | 45.0% | |
TGAACAGGAGAAAGGGTCTA+TGG | - | chr4_4:61264189-61264208 | Msa0692620:CDS | 45.0% | |
CAAACTGCATATAAGGGAGG+TGG | + | chr4_4:61264639-61264658 | None:intergenic | 45.0% | |
CTTCACAGGAGAGACAGTAT+AGG | + | chr4_4:61264715-61264734 | None:intergenic | 45.0% | |
GGGAGACTCAGATTAAAGTG+CGG | - | chr4_4:61264860-61264879 | Msa0692620:intron | 45.0% | |
TTCATTACTCGCATAGGCTG+TGG | + | chr4_4:61265138-61265157 | None:intergenic | 45.0% | |
GGATGCCAAAGAGTTGTCAT+TGG | + | chr4_4:61265242-61265261 | None:intergenic | 45.0% | |
CTGCCTGGAGCAGTTTATTT+AGG | + | chr4_4:61265263-61265282 | None:intergenic | 45.0% | |
CTAAATAAACTGCTCCAGGC+AGG | - | chr4_4:61265261-61265280 | Msa0692620:five_prime_UTR | 45.0% | |
AATCCCCCTATGGAATCCAA+AGG | - | chr4_4:61265295-61265314 | Msa0692620:five_prime_UTR | 45.0% | |
ACGACCTTTGGATTCCATAG+GGG | + | chr4_4:61265302-61265321 | None:intergenic | 45.0% | |
CACGACCTTTGGATTCCATA+GGG | + | chr4_4:61265303-61265322 | None:intergenic | 45.0% | |
!!! | TTTTTAAGTCCCTGATGGCC+TGG | - | chr4_4:61265603-61265622 | Msa0692620:intron | 45.0% |
TTACAAACTCCAGGCCATCA+GGG | + | chr4_4:61265615-61265634 | None:intergenic | 45.0% | |
ATTACAAACTCCAGGCCATC+AGG | + | chr4_4:61265616-61265635 | None:intergenic | 45.0% | |
! | TTCAGGCTTACTAGCCTCAT+CGG | + | chr4_4:61265646-61265665 | None:intergenic | 45.0% |
GCTAGTAAGCCTGAAATGAC+TGG | - | chr4_4:61265651-61265670 | Msa0692620:intron | 45.0% | |
ACTGCCAACCCCTTAACAAA+AGG | + | chr4_4:61265712-61265731 | None:intergenic | 45.0% | |
TTGCAACCCTTGATGTTGAG+AGG | - | chr4_4:61265816-61265835 | Msa0692620:intron | 45.0% | |
TGCAACCCTTGATGTTGAGA+GGG | - | chr4_4:61265817-61265836 | Msa0692620:intron | 45.0% | |
GCAAGCATTCAACCAGATCA+TGG | - | chr4_4:61265851-61265870 | Msa0692620:intron | 45.0% | |
CCCCTTTGCCTTGTAATTAG+TGG | + | chr4_4:61266231-61266250 | None:intergenic | 45.0% | |
TGTTGTTGTGGAGGACAATG+TGG | + | chr4_4:61266318-61266337 | None:intergenic | 45.0% | |
ACATTGTCCTCCACAACAAC+AGG | - | chr4_4:61266317-61266336 | Msa0692620:intron | 45.0% | |
CATTGTCCTCCACAACAACA+GGG | - | chr4_4:61266318-61266337 | Msa0692620:intron | 45.0% | |
TTCACTTGCATGACTCTCTC+AGG | - | chr4_4:61266341-61266360 | Msa0692620:intron | 45.0% | |
!! | ATTTGAGGTGCTGGCAAAAG+TGG | + | chr4_4:61266384-61266403 | None:intergenic | 45.0% |
! | GAGATTGCAATTTGAGGTGC+TGG | + | chr4_4:61266393-61266412 | None:intergenic | 45.0% |
!!! | GTTTTGAGGGTTTCCCTGAA+TGG | + | chr4_4:61266436-61266455 | None:intergenic | 45.0% |
GCTGAGAAGAAGTTGAAGGA+AGG | + | chr4_4:61266470-61266489 | None:intergenic | 45.0% | |
GATCCATTAAGAGAGGCAAG+AGG | - | chr4_4:61266620-61266639 | Msa0692620:intron | 45.0% | |
AGGCCACAATGCAGTAAACT+GGG | - | chr4_4:61266640-61266659 | Msa0692620:intron | 45.0% | |
CAACCCAGTTTACTGCATTG+TGG | + | chr4_4:61266646-61266665 | None:intergenic | 45.0% | |
CACAATGCAGTAAACTGGGT+TGG | - | chr4_4:61266644-61266663 | Msa0692620:intron | 45.0% | |
! | CAGTAAACTGGGTTGGAGTA+AGG | - | chr4_4:61266651-61266670 | Msa0692620:intron | 45.0% |
!! | AGTCTCGCTTGATTTGGCTT+TGG | - | chr4_4:61266715-61266734 | Msa0692620:intron | 45.0% |
!! | GTCTCGCTTGATTTGGCTTT+GGG | - | chr4_4:61266716-61266735 | Msa0692620:intron | 45.0% |
CAGCAAAACCATTCTGCGTT+CGG | - | chr4_4:61266930-61266949 | Msa0692620:intron | 45.0% | |
GCAGAGGTAAATTAAGGGGA+TGG | - | chr4_4:61266960-61266979 | Msa0692620:intron | 45.0% | |
TCCTGAATCCAAAGCTCCAT+AGG | - | chr4_4:61267756-61267775 | Msa0692620:five_prime_UTR | 45.0% | |
!! | ACCTATGGAGCTTTGGATTC+AGG | + | chr4_4:61267760-61267779 | None:intergenic | 45.0% |
ATAGGTCCAGCAAGCTGAAA+CGG | - | chr4_4:61267774-61267793 | Msa0692620:five_prime_UTR | 45.0% | |
GTAAACCATTTCCCTCAACC+CGG | - | chr4_4:61267797-61267816 | Msa0692620:five_prime_UTR | 45.0% | |
!! | ATTTTCCGGGTTGAGGGAAA+TGG | + | chr4_4:61267805-61267824 | None:intergenic | 45.0% |
TTTCCCTCAACCCGGAAAAT+TGG | - | chr4_4:61267805-61267824 | Msa0692620:five_prime_UTR | 45.0% | |
!! | CTTCCAATTTTCCGGGTTGA+GGG | + | chr4_4:61267811-61267830 | None:intergenic | 45.0% |
! | TCTTCCAATTTTCCGGGTTG+AGG | + | chr4_4:61267812-61267831 | None:intergenic | 45.0% |
ATCCTCGAGAAGCTAAGGTT+GGG | + | chr4_4:61267890-61267909 | None:intergenic | 45.0% | |
TATCCTCGAGAAGCTAAGGT+TGG | + | chr4_4:61267891-61267910 | None:intergenic | 45.0% | |
AACCTTAGCTTCTCGAGGAT+AGG | - | chr4_4:61267890-61267909 | Msa0692620:five_prime_UTR | 45.0% | |
ATCCTATCCTCGAGAAGCTA+AGG | + | chr4_4:61267895-61267914 | None:intergenic | 45.0% | |
AGCAGAGCAGACAAGATAAC+GGG | + | chr4_4:61267923-61267942 | None:intergenic | 45.0% | |
CAGCAGAGCAGACAAGATAA+CGG | + | chr4_4:61267924-61267943 | None:intergenic | 45.0% | |
!!! | AAACTAAAATAAAAATATTT+TGG | + | chr4_4:61262096-61262115 | None:intergenic | 5.0% |
GAGAGAGTGAGTGGTTCGTT+TGG | + | chr4_4:61258778-61258797 | None:intergenic | 50.0% | |
GAGAGAAGAGAGAGAGTGAG+TGG | + | chr4_4:61258787-61258806 | None:intergenic | 50.0% | |
GAGTGTCTTGCCACAAACAC+TGG | - | chr4_4:61259883-61259902 | Msa0692620:three_prime_UTR | 50.0% | |
CTTGAAGTGGTCCACTGCTA+TGG | + | chr4_4:61260292-61260311 | None:intergenic | 50.0% | |
AACAGGGAGCTGAGGAAAAC+AGG | + | chr4_4:61261009-61261028 | None:intergenic | 50.0% | |
CTCTAAGCAGTGCTGTCATC+TGG | - | chr4_4:61261263-61261282 | Msa0692620:intron | 50.0% | |
GTGCTGTCATCTGGGAATGA+TGG | - | chr4_4:61261272-61261291 | Msa0692620:intron | 50.0% | |
GTCCTAACCGACAGTCACAA+TGG | - | chr4_4:61261482-61261501 | Msa0692620:intron | 50.0% | |
! | TGCCATTGTGACTGTCGGTT+AGG | + | chr4_4:61261487-61261506 | None:intergenic | 50.0% |
! | TAAGCGCTGCTGTGAATACC+TGG | + | chr4_4:61261910-61261929 | None:intergenic | 50.0% |
!! | TCAAAAGCATCTTCCCCTCC+AGG | + | chr4_4:61262241-61262260 | None:intergenic | 50.0% |
CCAAGATTCTCAGACCACTC+TGG | + | chr4_4:61262469-61262488 | None:intergenic | 50.0% | |
CCAGAGTGGTCTGAGAATCT+TGG | - | chr4_4:61262466-61262485 | Msa0692620:CDS | 50.0% | |
AATTCTCACACCCTCGCAAC+AGG | - | chr4_4:61262525-61262544 | Msa0692620:CDS | 50.0% | |
ACAGCACCATTCTGTCCCAA+AGG | - | chr4_4:61262680-61262699 | Msa0692620:intron | 50.0% | |
CCTCAGTCCACCAATCCTTT+GGG | + | chr4_4:61262698-61262717 | None:intergenic | 50.0% | |
TCCTCAGTCCACCAATCCTT+TGG | + | chr4_4:61262699-61262718 | None:intergenic | 50.0% | |
GTGCTTCCACCACAGCTTAT+TGG | - | chr4_4:61262780-61262799 | Msa0692620:intron | 50.0% | |
GCTTCACCAATAAGCTGTGG+TGG | + | chr4_4:61262789-61262808 | None:intergenic | 50.0% | |
AGCATGATTCCTGCAGACAG+AGG | - | chr4_4:61262933-61262952 | Msa0692620:intron | 50.0% | |
GCATGATTCCTGCAGACAGA+GGG | - | chr4_4:61262934-61262953 | Msa0692620:intron | 50.0% | |
GACAGAGGGTCTGTTTCAGT+TGG | - | chr4_4:61262948-61262967 | Msa0692620:intron | 50.0% | |
AGCTGTTATCCACAGCACCA+GGG | + | chr4_4:61263187-61263206 | None:intergenic | 50.0% | |
TAGCTGTTATCCACAGCACC+AGG | + | chr4_4:61263188-61263207 | None:intergenic | 50.0% | |
GGTGCATCCTGATCTGAGTA+AGG | - | chr4_4:61264048-61264067 | Msa0692620:intron | 50.0% | |
!! | GAAGCTCGTTTTTGACGGCA+TGG | + | chr4_4:61264135-61264154 | None:intergenic | 50.0% |
ACAGAGTCAGAAAGGGTGAG+AGG | - | chr4_4:61264454-61264473 | Msa0692620:CDS | 50.0% | |
GCGTAGGCTGCTAATACCAA+AGG | + | chr4_4:61265186-61265205 | None:intergenic | 50.0% | |
! | ATTTGTGACTGACTCCTGCC+TGG | + | chr4_4:61265278-61265297 | None:intergenic | 50.0% |
GTCAGTCACAAATCCCCCTA+TGG | - | chr4_4:61265285-61265304 | Msa0692620:five_prime_UTR | 50.0% | |
CGACCTTTGGATTCCATAGG+GGG | + | chr4_4:61265301-61265320 | None:intergenic | 50.0% | |
GCACGACCTTTGGATTCCAT+AGG | + | chr4_4:61265304-61265323 | None:intergenic | 50.0% | |
TGGAATCCAAAGGTCGTGCA+TGG | - | chr4_4:61265305-61265324 | Msa0692620:five_prime_UTR | 50.0% | |
GCGGGTACATTACAAACTCC+AGG | + | chr4_4:61265624-61265643 | None:intergenic | 50.0% | |
TTGTAATGTACCCGCCGATG+AGG | - | chr4_4:61265629-61265648 | Msa0692620:intron | 50.0% | |
CTGAAATGACTGGGGACGAT+GGG | - | chr4_4:61265661-61265680 | Msa0692620:intron | 50.0% | |
ATGGGTGGAGGCTGAACAAT+TGG | - | chr4_4:61266251-61266270 | Msa0692620:intron | 50.0% | |
AGTGAACCCTGTTGTTGTGG+AGG | + | chr4_4:61266327-61266346 | None:intergenic | 50.0% | |
GCAAGTGAACCCTGTTGTTG+TGG | + | chr4_4:61266330-61266349 | None:intergenic | 50.0% | |
CAATCTCACAGTCTCTGGCT+TGG | - | chr4_4:61266406-61266425 | Msa0692620:intron | 50.0% | |
TTGAGGGTTTCCCTGAATGG+AGG | + | chr4_4:61266433-61266452 | None:intergenic | 50.0% | |
GGCCCTAAGGCTAAGGAAAA+AGG | + | chr4_4:61266554-61266573 | None:intergenic | 50.0% | |
TGGCCTCTTGCCTCTCTTAA+TGG | + | chr4_4:61266626-61266645 | None:intergenic | 50.0% | |
GAGGCCACAATGCAGTAAAC+TGG | - | chr4_4:61266639-61266658 | Msa0692620:intron | 50.0% | |
! | TGGGTTGGAGTAAGGAGAGT+TGG | - | chr4_4:61266659-61266678 | Msa0692620:intron | 50.0% |
GGGTTGGAGTAAGGAGAGTT+GGG | - | chr4_4:61266660-61266679 | Msa0692620:intron | 50.0% | |
GGTTGGAGTAAGGAGAGTTG+GGG | - | chr4_4:61266661-61266680 | Msa0692620:intron | 50.0% | |
! | GGCTTCCTTCTGGAGATCAA+CGG | - | chr4_4:61266682-61266701 | Msa0692620:intron | 50.0% |
GTCTACCGTTGATCTCCAGA+AGG | + | chr4_4:61266690-61266709 | None:intergenic | 50.0% | |
TCTGGAGATCAACGGTAGAC+AGG | - | chr4_4:61266690-61266709 | Msa0692620:intron | 50.0% | |
CTGGAGATCAACGGTAGACA+GGG | - | chr4_4:61266691-61266710 | Msa0692620:intron | 50.0% | |
CAGGGAAGTCTCGCTTGATT+TGG | - | chr4_4:61266709-61266728 | Msa0692620:intron | 50.0% | |
GACGATAACTCCACAAGACC+AGG | - | chr4_4:61266749-61266768 | Msa0692620:intron | 50.0% | |
ACATTGACGCAGCGAAGGAA+GGG | - | chr4_4:61266807-61266826 | Msa0692620:intron | 50.0% | |
AAGGGGCTTCAAGCGAAGTA+GGG | - | chr4_4:61266825-61266844 | Msa0692620:intron | 50.0% | |
CTTCTCTCACTCCGCATTGT+TGG | + | chr4_4:61266851-61266870 | None:intergenic | 50.0% | |
ACAATGCGGAGTGAGAGAAG+AGG | - | chr4_4:61266851-61266870 | Msa0692620:intron | 50.0% | |
! | TCTGGCCACGAGAAGCATAA+CGG | - | chr4_4:61266879-61266898 | Msa0692620:intron | 50.0% |
CATCTCCGTTATGCTTCTCG+TGG | + | chr4_4:61266887-61266906 | None:intergenic | 50.0% | |
! | ATAACGGAGATGCTCACCCA+AGG | - | chr4_4:61266895-61266914 | Msa0692620:intron | 50.0% |
!! | CGCAGAATGGTTTTGCTGCT+GGG | + | chr4_4:61266928-61266947 | None:intergenic | 50.0% |
!! | ACGCAGAATGGTTTTGCTGC+TGG | + | chr4_4:61266929-61266948 | None:intergenic | 50.0% |
ACCATTCTGCGTTCGGTTCA+AGG | - | chr4_4:61266937-61266956 | Msa0692620:intron | 50.0% | |
CCATTCTGCGTTCGGTTCAA+GGG | - | chr4_4:61266938-61266957 | Msa0692620:intron | 50.0% | |
GGCGCAGTGGTTACTGTTAA+AGG | + | chr4_4:61267007-61267026 | None:intergenic | 50.0% | |
TGCAGCATGATGTGGATGCT+GGG | + | chr4_4:61267057-61267076 | None:intergenic | 50.0% | |
ATGCAGCATGATGTGGATGC+TGG | + | chr4_4:61267058-61267077 | None:intergenic | 50.0% | |
TTGCTGGACCTATGGAGCTT+TGG | + | chr4_4:61267767-61267786 | None:intergenic | 50.0% | |
!! | GTTTCAGCTTGCTGGACCTA+TGG | + | chr4_4:61267775-61267794 | None:intergenic | 50.0% |
TAGGTCCAGCAAGCTGAAAC+GGG | - | chr4_4:61267775-61267794 | Msa0692620:five_prime_UTR | 50.0% | |
GTTTACCCGTTTCAGCTTGC+TGG | + | chr4_4:61267783-61267802 | None:intergenic | 50.0% | |
GCAGAGCAGACAAGATAACG+GGG | + | chr4_4:61267922-61267941 | None:intergenic | 50.0% | |
TGGTCCGCAACCGCAATTGA+GGG | - | chr4_4:61259672-61259691 | Msa0692620:three_prime_UTR | 55.0% | |
GCTTCCCTCAATTGCGGTTG+CGG | + | chr4_4:61259679-61259698 | None:intergenic | 55.0% | |
TCCTTCACCTACACCAGACC+CGG | - | chr4_4:61262645-61262664 | Msa0692620:intron | 55.0% | |
TGTGTAACCGGGTCTGGTGT+AGG | + | chr4_4:61262655-61262674 | None:intergenic | 55.0% | |
!! | CCCAAAGGATTGGTGGACTG+AGG | - | chr4_4:61262695-61262714 | Msa0692620:intron | 55.0% |
TGCATGTCTATGCATGCCGG+TGG | - | chr4_4:61262811-61262830 | Msa0692620:intron | 55.0% | |
CTATGCATGCCGGTGGTTAC+CGG | - | chr4_4:61262818-61262837 | Msa0692620:intron | 55.0% | |
TATGCATGCCGGTGGTTACC+GGG | - | chr4_4:61262819-61262838 | Msa0692620:intron | 55.0% | |
TCGTGATTCCCGGTAACCAC+CGG | + | chr4_4:61262830-61262849 | None:intergenic | 55.0% | |
GAAACAGACCCTCTGTCTGC+AGG | + | chr4_4:61262945-61262964 | None:intergenic | 55.0% | |
! | AAGAATGTCCCCTGGTGCTG+TGG | - | chr4_4:61263175-61263194 | Msa0692620:intron | 55.0% |
GCTGTTATCCACAGCACCAG+GGG | + | chr4_4:61263186-61263205 | None:intergenic | 55.0% | |
! | AGGCTTACTAGCCTCATCGG+CGG | + | chr4_4:61265643-61265662 | None:intergenic | 55.0% |
CCATCGTCCCCAGTCATTTC+AGG | + | chr4_4:61265663-61265682 | None:intergenic | 55.0% | |
CCTGAAATGACTGGGGACGA+TGG | - | chr4_4:61265660-61265679 | Msa0692620:intron | 55.0% | |
TACAAGGCAAAGGGGATGGG+TGG | - | chr4_4:61266236-61266255 | Msa0692620:intron | 55.0% | |
!! | GAGGTGCTGGCAAAAGTGGA+TGG | + | chr4_4:61266380-61266399 | None:intergenic | 55.0% |
!! | TCTGGCTTGGTCCTCCATTC+AGG | - | chr4_4:61266419-61266438 | Msa0692620:intron | 55.0% |
!! | CTGGCTTGGTCCTCCATTCA+GGG | - | chr4_4:61266420-61266439 | Msa0692620:intron | 55.0% |
ATCTTCTGTGCTGGGCCCTA+AGG | + | chr4_4:61266567-61266586 | None:intergenic | 55.0% | |
GGAAGACATTGACGCAGCGA+AGG | - | chr4_4:61266802-61266821 | Msa0692620:intron | 55.0% | |
GACATTGACGCAGCGAAGGA+AGG | - | chr4_4:61266806-61266825 | Msa0692620:intron | 55.0% | |
CATTGACGCAGCGAAGGAAG+GGG | - | chr4_4:61266808-61266827 | Msa0692620:intron | 55.0% | |
GAAGGGGCTTCAAGCGAAGT+AGG | - | chr4_4:61266824-61266843 | Msa0692620:intron | 55.0% | |
GCGAAGTAGGGCCAACAATG+CGG | - | chr4_4:61266837-61266856 | Msa0692620:intron | 55.0% | |
!! | GTGAGAGAAGAGGAGCACTC+TGG | - | chr4_4:61266861-61266880 | Msa0692620:intron | 55.0% |
CCCTTGAACCGAACGCAGAA+TGG | + | chr4_4:61266941-61266960 | None:intergenic | 55.0% | |
!!! | TGTTTTGGCTGATGGCGCAG+TGG | + | chr4_4:61267020-61267039 | None:intergenic | 55.0% |
GCAGCATGATGTGGATGCTG+GGG | + | chr4_4:61267056-61267075 | None:intergenic | 55.0% | |
TGCCCAACCTTAGCTTCTCG+AGG | - | chr4_4:61267885-61267904 | Msa0692620:five_prime_UTR | 55.0% | |
GTGGTCCGCAACCGCAATTG+AGG | - | chr4_4:61259671-61259690 | Msa0692620:three_prime_UTR | 60.0% | |
ACCGGGTCTGGTGTAGGTGA+AGG | + | chr4_4:61262649-61262668 | None:intergenic | 60.0% | |
ACGGCATGGCCACGTACTTC+TGG | + | chr4_4:61264121-61264140 | None:intergenic | 60.0% | |
!! | ACAGGTGTAGGAGGCGCCTT+TGG | - | chr4_4:61265167-61265186 | Msa0692620:intron | 60.0% |
! | GGCTTACTAGCCTCATCGGC+GGG | + | chr4_4:61265642-61265661 | None:intergenic | 60.0% |
AAGGCAAAGGGGATGGGTGG+AGG | - | chr4_4:61266239-61266258 | Msa0692620:intron | 60.0% | |
TGTGCTGGGCCCTAAGGCTA+AGG | + | chr4_4:61266561-61266580 | None:intergenic | 60.0% | |
GGAGAGTTGGGGCTTCCTTC+TGG | - | chr4_4:61266672-61266691 | Msa0692620:intron | 60.0% | |
AAGCTCAAGCGGCTTGCACC+TGG | + | chr4_4:61266770-61266789 | None:intergenic | 60.0% | |
GCTGCTGGGCTTCTCACCTT+GGG | + | chr4_4:61266914-61266933 | None:intergenic | 60.0% | |
TGCTGCTGGGCTTCTCACCT+TGG | + | chr4_4:61266915-61266934 | None:intergenic | 60.0% | |
TGCGTTCGGTTCAAGGGCAG+AGG | - | chr4_4:61266944-61266963 | Msa0692620:intron | 60.0% | |
!! | GCGGCTTGCACCTGGTCTTG+TGG | + | chr4_4:61266762-61266781 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 61258699 | 61267961 | 61258699 | ID=Msa0692620;Name=Msa0692620 |
chr4_4 | mRNA | 61258699 | 61267961 | 61258699 | ID=Msa0692620-mRNA-1;Parent=Msa0692620;Name=Msa0692620-mRNA-1;_AED=0.17;_eAED=0.17;_QI=728|1|1|1|0.44|0.3|10|1520|605 |
chr4_4 | exon | 61258699 | 61258911 | 61258699 | ID=Msa0692620-mRNA-1:exon:16884;Parent=Msa0692620-mRNA-1 |
chr4_4 | exon | 61259583 | 61260529 | 61259583 | ID=Msa0692620-mRNA-1:exon:16883;Parent=Msa0692620-mRNA-1 |
chr4_4 | exon | 61261706 | 61262611 | 61261706 | ID=Msa0692620-mRNA-1:exon:16882;Parent=Msa0692620-mRNA-1 |
chr4_4 | exon | 61263281 | 61264024 | 61263281 | ID=Msa0692620-mRNA-1:exon:16881;Parent=Msa0692620-mRNA-1 |
chr4_4 | exon | 61264114 | 61264512 | 61264114 | ID=Msa0692620-mRNA-1:exon:16880;Parent=Msa0692620-mRNA-1 |
chr4_4 | exon | 61264601 | 61264670 | 61264601 | ID=Msa0692620-mRNA-1:exon:16879;Parent=Msa0692620-mRNA-1 |
chr4_4 | exon | 61264750 | 61264869 | 61264750 | ID=Msa0692620-mRNA-1:exon:16878;Parent=Msa0692620-mRNA-1 |
chr4_4 | exon | 61265232 | 61265505 | 61265232 | ID=Msa0692620-mRNA-1:exon:16877;Parent=Msa0692620-mRNA-1 |
chr4_4 | exon | 61267467 | 61267552 | 61267467 | ID=Msa0692620-mRNA-1:exon:16876;Parent=Msa0692620-mRNA-1 |
chr4_4 | exon | 61267655 | 61267961 | 61267655 | ID=Msa0692620-mRNA-1:exon:16875;Parent=Msa0692620-mRNA-1 |
chr4_4 | five_prime_UTR | 61267655 | 61267961 | 61267655 | ID=Msa0692620-mRNA-1:five_prime_utr;Parent=Msa0692620-mRNA-1 |
chr4_4 | five_prime_UTR | 61267467 | 61267552 | 61267467 | ID=Msa0692620-mRNA-1:five_prime_utr;Parent=Msa0692620-mRNA-1 |
chr4_4 | five_prime_UTR | 61265232 | 61265505 | 61265232 | ID=Msa0692620-mRNA-1:five_prime_utr;Parent=Msa0692620-mRNA-1 |
chr4_4 | five_prime_UTR | 61264809 | 61264869 | 61264809 | ID=Msa0692620-mRNA-1:five_prime_utr;Parent=Msa0692620-mRNA-1 |
chr4_4 | CDS | 61264750 | 61264808 | 61264750 | ID=Msa0692620-mRNA-1:cds;Parent=Msa0692620-mRNA-1 |
chr4_4 | CDS | 61264601 | 61264670 | 61264601 | ID=Msa0692620-mRNA-1:cds;Parent=Msa0692620-mRNA-1 |
chr4_4 | CDS | 61264114 | 61264512 | 61264114 | ID=Msa0692620-mRNA-1:cds;Parent=Msa0692620-mRNA-1 |
chr4_4 | CDS | 61263281 | 61264024 | 61263281 | ID=Msa0692620-mRNA-1:cds;Parent=Msa0692620-mRNA-1 |
chr4_4 | CDS | 61262066 | 61262611 | 61262066 | ID=Msa0692620-mRNA-1:cds;Parent=Msa0692620-mRNA-1 |
chr4_4 | three_prime_UTR | 61261706 | 61262065 | 61261706 | ID=Msa0692620-mRNA-1:three_prime_utr;Parent=Msa0692620-mRNA-1 |
chr4_4 | three_prime_UTR | 61259583 | 61260529 | 61259583 | ID=Msa0692620-mRNA-1:three_prime_utr;Parent=Msa0692620-mRNA-1 |
chr4_4 | three_prime_UTR | 61258699 | 61258911 | 61258699 | ID=Msa0692620-mRNA-1:three_prime_utr;Parent=Msa0692620-mRNA-1 |
Gene Sequence |
Protein sequence |