Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165430 | XP_003589223.1 | 94.712 | 208 | 11 | 0 | 1 | 208 | 1 | 208 | 2.98e-143 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165430 | G7I4F7 | 94.712 | 208 | 11 | 0 | 1 | 208 | 1 | 208 | 1.42e-143 | 407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0165430 | -0.832637 | 8.439509e-56 | -8.615850e-47 |
| Msa0007080 | Msa0165430 | 0.816657 | 4.938116e-52 | -8.615850e-47 |
| Msa0038350 | Msa0165430 | -0.808314 | 3.292228e-50 | -8.615850e-47 |
| Msa0046310 | Msa0165430 | 0.805463 | 1.318850e-49 | -8.615850e-47 |
| Msa0048000 | Msa0165430 | 0.820267 | 7.505998e-53 | -8.615850e-47 |
| Msa0050730 | Msa0165430 | 0.814997 | 1.158197e-51 | -8.615850e-47 |
| Msa0050760 | Msa0165430 | 0.813862 | 2.065018e-51 | -8.615850e-47 |
| Msa0093400 | Msa0165430 | 0.805461 | 1.320235e-49 | -8.615850e-47 |
| Msa0094100 | Msa0165430 | 0.810758 | 9.831720e-51 | -8.615850e-47 |
| Msa0101810 | Msa0165430 | -0.812624 | 3.861548e-51 | -8.615850e-47 |
| Msa0102750 | Msa0165430 | 0.838437 | 2.878203e-57 | -8.615850e-47 |
| Msa0105420 | Msa0165430 | 0.843712 | 1.184107e-58 | -8.615850e-47 |
| Msa0124110 | Msa0165430 | 0.835613 | 1.515785e-56 | -8.615850e-47 |
| Msa0140910 | Msa0165430 | 0.844050 | 9.608153e-59 | -8.615850e-47 |
| Msa0142240 | Msa0165430 | 0.803960 | 2.716916e-49 | -8.615850e-47 |
| Msa0145670 | Msa0165430 | 0.800600 | 1.335919e-48 | -8.615850e-47 |
| Msa0165430 | Msa0183750 | 0.801012 | 1.100721e-48 | -8.615850e-47 |
| Msa0165430 | Msa0185480 | 0.816497 | 5.364497e-52 | -8.615850e-47 |
| Msa0165430 | Msa0185640 | -0.824159 | 9.386848e-54 | -8.615850e-47 |
| Msa0165430 | Msa0190830 | 0.816519 | 5.303606e-52 | -8.615850e-47 |
| Msa0165430 | Msa0191250 | 0.807028 | 6.174057e-50 | -8.615850e-47 |
| Msa0165430 | Msa0193650 | 0.804902 | 1.728261e-49 | -8.615850e-47 |
| Msa0165430 | Msa0201330 | 0.823407 | 1.408116e-53 | -8.615850e-47 |
| Msa0165430 | Msa0201370 | 0.841709 | 4.031269e-58 | -8.615850e-47 |
| Msa0165430 | Msa0208390 | 0.824420 | 8.149845e-54 | -8.615850e-47 |
| Msa0165430 | Msa0211010 | 0.839973 | 1.149918e-57 | -8.615850e-47 |
| Msa0165430 | Msa0217400 | 0.860198 | 2.441498e-63 | -8.615850e-47 |
| Msa0165430 | Msa0225320 | 0.810033 | 1.409563e-50 | -8.615850e-47 |
| Msa0165430 | Msa0233190 | 0.817672 | 2.921261e-52 | -8.615850e-47 |
| Msa0165430 | Msa0239130 | 0.832689 | 8.190267e-56 | -8.615850e-47 |
| Msa0165430 | Msa0243910 | 0.805967 | 1.033436e-49 | -8.615850e-47 |
| Msa0165430 | Msa0243930 | 0.848030 | 7.944352e-60 | -8.615850e-47 |
| Msa0165430 | Msa0251670 | 0.808534 | 2.954385e-50 | -8.615850e-47 |
| Msa0165430 | Msa0253370 | 0.818594 | 1.807141e-52 | -8.615850e-47 |
| Msa0165430 | Msa0254290 | 0.814732 | 1.326108e-51 | -8.615850e-47 |
| Msa0165430 | Msa0257250 | 0.850883 | 1.273101e-60 | -8.615850e-47 |
| Msa0165430 | Msa0258670 | -0.800970 | 1.122741e-48 | -8.615850e-47 |
| Msa0165430 | Msa0260810 | 0.817378 | 3.401709e-52 | -8.615850e-47 |
| Msa0165430 | Msa0265820 | 0.811597 | 6.464125e-51 | -8.615850e-47 |
| Msa0165430 | Msa0266000 | -0.849245 | 3.658762e-60 | -8.615850e-47 |
| Msa0165430 | Msa0270270 | 0.807235 | 5.579863e-50 | -8.615850e-47 |
| Msa0165430 | Msa0275670 | 0.824182 | 9.272464e-54 | -8.615850e-47 |
| Msa0165430 | Msa0282590 | 0.838098 | 3.517395e-57 | -8.615850e-47 |
| Msa0165430 | Msa0290650 | 0.835307 | 1.811167e-56 | -8.615850e-47 |
| Msa0165430 | Msa0292180 | 0.805807 | 1.117081e-49 | -8.615850e-47 |
| Msa0165430 | Msa0296560 | 0.836355 | 9.821476e-57 | -8.615850e-47 |
| Msa0165430 | Msa0297960 | 0.823235 | 1.544924e-53 | -8.615850e-47 |
| Msa0165430 | Msa0304740 | 0.803081 | 4.131892e-49 | -8.615850e-47 |
| Msa0165430 | Msa0304990 | 0.803326 | 3.677236e-49 | -8.615850e-47 |
| Msa0165430 | Msa0311580 | 0.819989 | 8.692524e-53 | -8.615850e-47 |
| Msa0165430 | Msa0311860 | 0.809093 | 2.243292e-50 | -8.615850e-47 |
| Msa0165430 | Msa0313990 | 0.821244 | 4.476078e-53 | -8.615850e-47 |
| Msa0165430 | Msa0330400 | 0.803102 | 4.091276e-49 | -8.615850e-47 |
| Msa0165430 | Msa0331590 | 0.808707 | 2.713274e-50 | -8.615850e-47 |
| Msa0165430 | Msa0333720 | -0.826135 | 3.202555e-54 | -8.615850e-47 |
| Msa0165430 | Msa0334350 | 0.804170 | 2.456404e-49 | -8.615850e-47 |
| Msa0165430 | Msa0335040 | 0.846891 | 1.633242e-59 | -8.615850e-47 |
| Msa0165430 | Msa0337330 | 0.801681 | 8.026577e-49 | -8.615850e-47 |
| Msa0165430 | Msa0338110 | 0.804174 | 2.451995e-49 | -8.615850e-47 |
| Msa0165430 | Msa0341910 | 0.801898 | 7.246203e-49 | -8.615850e-47 |
| Msa0165430 | Msa0342340 | -0.824364 | 8.399906e-54 | -8.615850e-47 |
| Msa0165430 | Msa0349080 | 0.801421 | 9.077061e-49 | -8.615850e-47 |
| Msa0165430 | Msa0356890 | -0.819847 | 9.368998e-53 | -8.615850e-47 |
| Msa0165430 | Msa0362740 | 0.810034 | 1.408403e-50 | -8.615850e-47 |
| Msa0165430 | Msa0365360 | 0.816167 | 6.356721e-52 | -8.615850e-47 |
| Msa0165430 | Msa0369360 | 0.812551 | 4.004687e-51 | -8.615850e-47 |
| Msa0165430 | Msa0371540 | 0.804840 | 1.780362e-49 | -8.615850e-47 |
| Msa0165430 | Msa0389340 | 0.806928 | 6.482501e-50 | -8.615850e-47 |
| Msa0165430 | Msa0398500 | 0.800573 | 1.352835e-48 | -8.615850e-47 |
| Msa0165430 | Msa0412970 | 0.800293 | 1.542629e-48 | -8.615850e-47 |
| Msa0165430 | Msa0414950 | -0.817743 | 2.814331e-52 | -8.615850e-47 |
| Msa0165430 | Msa0416800 | 0.825868 | 3.705753e-54 | -8.615850e-47 |
| Msa0165430 | Msa0437710 | 0.816632 | 5.002948e-52 | -8.615850e-47 |
| Msa0165430 | Msa0448550 | -0.814307 | 1.646484e-51 | -8.615850e-47 |
| Msa0165430 | Msa0452920 | 0.800149 | 1.650283e-48 | -8.615850e-47 |
| Msa0165430 | Msa0457370 | 0.811118 | 8.214763e-51 | -8.615850e-47 |
| Msa0165430 | Msa0459770 | -0.804093 | 2.548677e-49 | -8.615850e-47 |
| Msa0165430 | Msa0463460 | 0.819207 | 1.311165e-52 | -8.615850e-47 |
| Msa0165430 | Msa0466060 | 0.809641 | 1.711804e-50 | -8.615850e-47 |
| Msa0165430 | Msa0466390 | 0.801194 | 1.010281e-48 | -8.615850e-47 |
| Msa0165430 | Msa0467900 | -0.814430 | 1.547222e-51 | -8.615850e-47 |
| Msa0165430 | Msa0480980 | 0.800644 | 1.308201e-48 | -8.615850e-47 |
| Msa0165430 | Msa0484780 | 0.800409 | 1.460998e-48 | -8.615850e-47 |
| Msa0165430 | Msa0491040 | 0.800374 | 1.484980e-48 | -8.615850e-47 |
| Msa0165430 | Msa0509970 | 0.819361 | 1.209199e-52 | -8.615850e-47 |
| Msa0165430 | Msa0517330 | 0.804474 | 2.122719e-49 | -8.615850e-47 |
| Msa0165430 | Msa0517340 | 0.806643 | 7.445010e-50 | -8.615850e-47 |
| Msa0165430 | Msa0524890 | -0.804715 | 1.890831e-49 | -8.615850e-47 |
| Msa0165430 | Msa0531990 | -0.802166 | 6.382070e-49 | -8.615850e-47 |
| Msa0165430 | Msa0532100 | -0.801711 | 7.913710e-49 | -8.615850e-47 |
| Msa0165430 | Msa0536220 | 0.805939 | 1.047814e-49 | -8.615850e-47 |
| Msa0165430 | Msa0543900 | 0.811813 | 5.802242e-51 | -8.615850e-47 |
| Msa0165430 | Msa0557680 | 0.821913 | 3.136128e-53 | -8.615850e-47 |
| Msa0165430 | Msa0558690 | 0.801028 | 1.092384e-48 | -8.615850e-47 |
| Msa0165430 | Msa0567020 | 0.843670 | 1.215019e-58 | -8.615850e-47 |
| Msa0165430 | Msa0581760 | 0.812944 | 3.284679e-51 | -8.615850e-47 |
| Msa0165430 | Msa0599770 | 0.805177 | 1.513628e-49 | -8.615850e-47 |
| Msa0165430 | Msa0623170 | 0.803252 | 3.809658e-49 | -8.615850e-47 |
| Msa0165430 | Msa0640380 | 0.801757 | 7.743468e-49 | -8.615850e-47 |
| Msa0165430 | Msa0653020 | 0.808046 | 3.753198e-50 | -8.615850e-47 |
| Msa0165430 | Msa0657170 | 0.802639 | 5.100168e-49 | -8.615850e-47 |
| Msa0165430 | Msa0658570 | 0.846090 | 2.701166e-59 | -8.615850e-47 |
| Msa0165430 | Msa0692620 | 0.813952 | 1.972213e-51 | -8.615850e-47 |
| Msa0165430 | Msa0695410 | 0.811776 | 5.910109e-51 | -8.615850e-47 |
| Msa0165430 | Msa0701840 | -0.821311 | 4.318514e-53 | -8.615850e-47 |
| Msa0165430 | Msa0703490 | 0.856181 | 3.826031e-62 | -8.615850e-47 |
| Msa0165430 | Msa0715310 | 0.813677 | 2.267225e-51 | -8.615850e-47 |
| Msa0165430 | Msa0715720 | 0.815538 | 8.784159e-52 | -8.615850e-47 |
| Msa0165430 | Msa0718240 | 0.826396 | 2.775482e-54 | -8.615850e-47 |
| Msa0165430 | Msa0719490 | -0.808770 | 2.631190e-50 | -8.615850e-47 |
| Msa0165430 | Msa0722930 | 0.829405 | 5.244036e-55 | -8.615850e-47 |
| Msa0165430 | Msa0723140 | 0.833054 | 6.648830e-56 | -8.615850e-47 |
| Msa0165430 | Msa0736060 | 0.809304 | 2.021261e-50 | -8.615850e-47 |
| Msa0165430 | Msa0754720 | -0.815156 | 1.067827e-51 | -8.615850e-47 |
| Msa0165430 | Msa0756630 | -0.818769 | 1.649361e-52 | -8.615850e-47 |
| Msa0165430 | Msa0757950 | 0.801010 | 1.101519e-48 | -8.615850e-47 |
| Msa0165430 | Msa0764700 | 0.844100 | 9.316602e-59 | -8.615850e-47 |
| Msa0165430 | Msa0767080 | 0.801081 | 1.065352e-48 | -8.615850e-47 |
| Msa0165430 | Msa0773610 | 0.811406 | 7.114255e-51 | -8.615850e-47 |
| Msa0165430 | Msa0777930 | 0.805591 | 1.239777e-49 | -8.615850e-47 |
| Msa0165430 | Msa0792510 | 0.832786 | 7.749317e-56 | -8.615850e-47 |
| Msa0165430 | Msa0795390 | 0.809731 | 1.636606e-50 | -8.615850e-47 |
| Msa0165430 | Msa0802470 | -0.825781 | 3.886611e-54 | -8.615850e-47 |
| Msa0165430 | Msa0806210 | 0.822569 | 2.207963e-53 | -8.615850e-47 |
| Msa0165430 | Msa0829620 | 0.809928 | 1.484356e-50 | -8.615850e-47 |
| Msa0165430 | Msa0835920 | 0.808668 | 2.765956e-50 | -8.615850e-47 |
| Msa0165430 | Msa0839330 | 0.810372 | 1.191207e-50 | -8.615850e-47 |
| Msa0165430 | Msa0843280 | 0.808045 | 3.755716e-50 | -8.615850e-47 |
| Msa0165430 | Msa0844240 | 0.800358 | 1.496517e-48 | -8.615850e-47 |
| Msa0165430 | Msa0845590 | -0.807701 | 4.443856e-50 | -8.615850e-47 |
| Msa0165430 | Msa0867890 | 0.819951 | 8.866057e-53 | -8.615850e-47 |
| Msa0165430 | Msa0870530 | 0.823422 | 1.396966e-53 | -8.615850e-47 |
| Msa0165430 | Msa0880080 | 0.811949 | 5.419338e-51 | -8.615850e-47 |
| Msa0165430 | Msa0894890 | 0.829160 | 6.012099e-55 | -8.615850e-47 |
| Msa0165430 | Msa0896220 | 0.812518 | 4.072297e-51 | -8.615850e-47 |
| Msa0165430 | Msa0900200 | 0.808729 | 2.683869e-50 | -8.615850e-47 |
| Msa0165430 | Msa0903700 | 0.806746 | 7.081353e-50 | -8.615850e-47 |
| Msa0165430 | Msa0908170 | 0.808845 | 2.534970e-50 | -8.615850e-47 |
| Msa0165430 | Msa0921630 | 0.813084 | 3.060811e-51 | -8.615850e-47 |
| Msa0165430 | Msa0944770 | 0.801121 | 1.045719e-48 | -8.615850e-47 |
| Msa0165430 | Msa0951720 | 0.827878 | 1.226882e-54 | -8.615850e-47 |
| Msa0165430 | Msa0961420 | -0.810652 | 1.036036e-50 | -8.615850e-47 |
| Msa0165430 | Msa0965520 | 0.825237 | 5.229430e-54 | -8.615850e-47 |
| Msa0165430 | Msa0973150 | 0.832170 | 1.101611e-55 | -8.615850e-47 |
| Msa0165430 | Msa0988500 | 0.800840 | 1.193367e-48 | -8.615850e-47 |
| Msa0165430 | Msa0990960 | 0.808132 | 3.599175e-50 | -8.615850e-47 |
| Msa0165430 | Msa0991670 | 0.800562 | 1.359777e-48 | -8.615850e-47 |
| Msa0165430 | Msa0996130 | 0.800623 | 1.321237e-48 | -8.615850e-47 |
| Msa0165430 | Msa1000020 | 0.849172 | 3.834076e-60 | -8.615850e-47 |
| Msa0165430 | Msa1000300 | 0.805325 | 1.409979e-49 | -8.615850e-47 |
| Msa0165430 | Msa1001200 | 0.810531 | 1.100569e-50 | -8.615850e-47 |
| Msa0165430 | Msa1008490 | 0.839012 | 2.043409e-57 | -8.615850e-47 |
| Msa0165430 | Msa1009000 | 0.817934 | 2.548916e-52 | -8.615850e-47 |
| Msa0165430 | Msa1009020 | 0.816682 | 4.876970e-52 | -8.615850e-47 |
| Msa0165430 | Msa1019020 | 0.827388 | 1.608378e-54 | -8.615850e-47 |
| Msa0165430 | Msa1026500 | 0.804587 | 2.010929e-49 | -8.615850e-47 |
| Msa0165430 | Msa1036390 | 0.838453 | 2.850640e-57 | -8.615850e-47 |
| Msa0165430 | Msa1040120 | 0.835122 | 2.016915e-56 | -8.615850e-47 |
| Msa0165430 | Msa1041730 | 0.827924 | 1.195929e-54 | -8.615850e-47 |
| Msa0165430 | Msa1043920 | 0.865596 | 5.265827e-65 | -8.615850e-47 |
| Msa0165430 | Msa1044090 | 0.824403 | 8.224466e-54 | -8.615850e-47 |
| Msa0165430 | Msa1068200 | -0.801878 | 7.315597e-49 | -8.615850e-47 |
| Msa0165430 | Msa1075220 | -0.819704 | 1.009745e-52 | -8.615850e-47 |
| Msa0165430 | Msa1076680 | 0.837513 | 4.972563e-57 | -8.615850e-47 |
| Msa0165430 | Msa1080160 | 0.812650 | 3.810445e-51 | -8.615850e-47 |
| Msa0165430 | Msa1081600 | 0.844043 | 9.653851e-59 | -8.615850e-47 |
| Msa0165430 | Msa1082500 | 0.812097 | 5.031679e-51 | -8.615850e-47 |
| Msa0165430 | Msa1083410 | 0.844403 | 7.727100e-59 | -8.615850e-47 |
| Msa0165430 | Msa1085300 | 0.815902 | 7.287072e-52 | -8.615850e-47 |
| Msa0165430 | Msa1098560 | 0.839444 | 1.579268e-57 | -8.615850e-47 |
| Msa0165430 | Msa1099030 | 0.810817 | 9.543116e-51 | -8.615850e-47 |
| Msa0165430 | Msa1104000 | 0.835180 | 1.950145e-56 | -8.615850e-47 |
| Msa0165430 | Msa1111760 | 0.806021 | 1.006949e-49 | -8.615850e-47 |
| Msa0165430 | Msa1116130 | -0.812591 | 3.925758e-51 | -8.615850e-47 |
| Msa0165430 | Msa1125040 | 0.812719 | 3.679840e-51 | -8.615850e-47 |
| Msa0165430 | Msa1125080 | 0.837804 | 4.186630e-57 | -8.615850e-47 |
| Msa0165430 | Msa1128160 | 0.833287 | 5.817451e-56 | -8.615850e-47 |
| Msa0165430 | Msa1130270 | -0.829441 | 5.137986e-55 | -8.615850e-47 |
| Msa0165430 | Msa1139000 | -0.818547 | 1.851889e-52 | -8.615850e-47 |
| Msa0165430 | Msa1139240 | 0.804681 | 1.922009e-49 | -8.615850e-47 |
| Msa0165430 | Msa1147570 | 0.822030 | 2.946216e-53 | -8.615850e-47 |
| Msa0165430 | Msa1154070 | 0.815427 | 9.297176e-52 | -8.615850e-47 |
| Msa0165430 | Msa1162550 | -0.813111 | 3.019882e-51 | -8.615850e-47 |
| Msa0165430 | Msa1165360 | 0.835483 | 1.634560e-56 | -8.615850e-47 |
| Msa0165430 | Msa1166370 | 0.849832 | 2.509487e-60 | -8.615850e-47 |
| Msa0165430 | Msa1167220 | 0.828702 | 7.762120e-55 | -8.615850e-47 |
| Msa0165430 | Msa1167400 | 0.808769 | 2.632286e-50 | -8.615850e-47 |
| Msa0165430 | Msa1204980 | -0.815703 | 8.070394e-52 | -8.615850e-47 |
| Msa0165430 | Msa1205010 | -0.822911 | 1.838634e-53 | -8.615850e-47 |
| Msa0165430 | Msa1208710 | 0.816276 | 6.011312e-52 | -8.615850e-47 |
| Msa0165430 | Msa1221200 | -0.822410 | 2.404981e-53 | -8.615850e-47 |
| Msa0165430 | Msa1222970 | 0.826527 | 2.582771e-54 | -8.615850e-47 |
| Msa0165430 | Msa1228210 | 0.852916 | 3.371319e-61 | -8.615850e-47 |
| Msa0165430 | Msa1256540 | -0.820070 | 8.331042e-53 | -8.615850e-47 |
| Msa0165430 | Msa1258950 | 0.819758 | 9.813879e-53 | -8.615850e-47 |
| Msa0165430 | Msa1264020 | 0.824240 | 8.983708e-54 | -8.615850e-47 |
| Msa0165430 | Msa1271280 | 0.836979 | 6.811215e-57 | -8.615850e-47 |
| Msa0165430 | Msa1271300 | 0.857182 | 1.942851e-62 | -8.615850e-47 |
| Msa0165430 | Msa1278840 | 0.817305 | 3.532966e-52 | -8.615850e-47 |
| Msa0165430 | Msa1283860 | 0.805570 | 1.252314e-49 | -8.615850e-47 |
| Msa0165430 | Msa1296960 | -0.832140 | 1.120032e-55 | -8.615850e-47 |
| Msa0165430 | Msa1308380 | 0.820738 | 5.852197e-53 | -8.615850e-47 |
| Msa0165430 | Msa1308590 | 0.808079 | 3.693237e-50 | -8.615850e-47 |
| Msa0165430 | Msa1308640 | 0.812817 | 3.503513e-51 | -8.615850e-47 |
| Msa0165430 | Msa1318240 | 0.806486 | 8.036046e-50 | -8.615850e-47 |
| Msa0165430 | Msa1319650 | 0.803712 | 3.057782e-49 | -8.615850e-47 |
| Msa0165430 | Msa1322890 | 0.819628 | 1.050822e-52 | -8.615850e-47 |
| Msa0165430 | Msa1327050 | 0.811732 | 6.042062e-51 | -8.615850e-47 |
| Msa0165430 | Msa1329990 | 0.803929 | 2.756928e-49 | -8.615850e-47 |
| Msa0165430 | Msa1335770 | 0.990697 | 6.992479e-184 | -8.615850e-47 |
| Msa0165430 | Msa1340650 | 0.808652 | 2.787301e-50 | -8.615850e-47 |
| Msa0165430 | Msa1342430 | 0.805706 | 1.172879e-49 | -8.615850e-47 |
| Msa0165430 | Msa1350840 | 0.807317 | 5.361242e-50 | -8.615850e-47 |
| Msa0165430 | Msa1355260 | 0.803252 | 3.809117e-49 | -8.615850e-47 |
| Msa0165430 | Msa1358870 | -0.829817 | 4.163852e-55 | -8.615850e-47 |
| Msa0165430 | Msa1363890 | 0.831788 | 1.368282e-55 | -8.615850e-47 |
| Msa0165430 | Msa1365040 | -0.802777 | 4.776073e-49 | -8.615850e-47 |
| Msa0165430 | Msa1367080 | 0.816749 | 4.710681e-52 | -8.615850e-47 |
| Msa0165430 | Msa1373950 | 0.830180 | 3.394620e-55 | -8.615850e-47 |
| Msa0165430 | Msa1376890 | 0.847376 | 1.202412e-59 | -8.615850e-47 |
| Msa0165430 | Msa1384350 | 0.808431 | 3.108474e-50 | -8.615850e-47 |
| Msa0165430 | Msa1386520 | 0.806166 | 9.386868e-50 | -8.615850e-47 |
| Msa0165430 | Msa1390120 | 0.814603 | 1.416385e-51 | -8.615850e-47 |
| Msa0165430 | Msa1395530 | 0.819401 | 1.183892e-52 | -8.615850e-47 |
| Msa0165430 | Msa1399500 | 0.800551 | 1.366906e-48 | -8.615850e-47 |
| Msa0165430 | Msa1401530 | 0.800383 | 1.479122e-48 | -8.615850e-47 |
| Msa0165430 | Msa1404540 | 0.817935 | 2.547730e-52 | -8.615850e-47 |
| Msa0165430 | Msa1408790 | 0.803875 | 2.828868e-49 | -8.615850e-47 |
| Msa0165430 | Msa1414740 | 0.861480 | 9.960714e-64 | -8.615850e-47 |
| Msa0165430 | Msa1423080 | 0.811336 | 7.367747e-51 | -8.615850e-47 |
| Msa0165430 | Msa1423450 | 0.805877 | 1.079901e-49 | -8.615850e-47 |
| Msa0165430 | Msa1427760 | 0.809834 | 1.555678e-50 | -8.615850e-47 |
| Msa0165430 | Msa1431060 | 0.820610 | 6.263408e-53 | -8.615850e-47 |
| Msa0165430 | Msa1436040 | 0.808325 | 3.273958e-50 | -8.615850e-47 |
| Msa0165430 | Msa1437190 | 0.809206 | 2.121446e-50 | -8.615850e-47 |
| Msa0165430 | Msa1440600 | 0.816202 | 6.243534e-52 | -8.615850e-47 |
| Msa0165430 | Msa1447440 | 0.815509 | 8.916551e-52 | -8.615850e-47 |
| Msa0165430 | Msa1453710 | 0.809919 | 1.491119e-50 | -8.615850e-47 |
| Msa0165430 | Msa1457670 | -0.803980 | 2.690836e-49 | -8.615850e-47 |
| Msa0165430 | Msa1460890 | 0.805514 | 1.286939e-49 | -8.615850e-47 |
| Msa0165430 | Msa1465900 | 0.824130 | 9.535036e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165430 | MtrunA17_Chr1g0153711 | 94.712 | 208 | 11 | 0 | 1 | 208 | 1 | 208 | 2.74e-147 | 407 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165430 | AT1G47410.1 | 38.000 | 200 | 88 | 6 | 21 | 208 | 9 | 184 | 7.76e-32 | 114 |
| Msa0165430 | AT1G47410.2 | 38.000 | 200 | 88 | 6 | 21 | 208 | 9 | 184 | 7.76e-32 | 114 |
Find 61 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGAGCATTCCGTCCTTTA+AGG | 0.089873 | 1_4:+46011770 | None:intergenic |
| CCCTAAAATAATACACTTTA+TGG | 0.093718 | 1_4:+46011812 | None:intergenic |
| TTAACTTAACTTTACCTTAA+AGG | 0.134585 | 1_4:-46011784 | Msa0165430:five_prime_UTR |
| AGTTCTGATTCTTACATTTC+TGG | 0.208989 | 1_4:+46010784 | None:intergenic |
| CAAAGTTACTTGAATTTATA+TGG | 0.221019 | 1_4:-46010842 | Msa0165430:exon |
| TATGCAAGATGTTTATATAT+TGG | 0.257296 | 1_4:+46011666 | None:intergenic |
| TCTTCATCAAGATCACTAAT+TGG | 0.271099 | 1_4:+46011464 | None:intergenic |
| ATTATGTGTTACTGGGAAAA+TGG | 0.272982 | 1_4:-46011175 | Msa0165430:CDS |
| TGGTTGAACATTATTGAATA+AGG | 0.278431 | 1_4:-46010762 | Msa0165430:three_prime_UTR |
| TTGGAAGCGTTCTATAATTC+AGG | 0.285690 | 1_4:-46010980 | Msa0165430:CDS |
| ACAAGAGAATTATGTGTTAC+TGG | 0.321124 | 1_4:-46011183 | Msa0165430:CDS |
| CAATGAAGCAGGTCAATTAA+AGG | 0.321544 | 1_4:-46011716 | Msa0165430:five_prime_UTR |
| TTACCTCCCTCCTTTGCCTT+TGG | 0.326286 | 1_4:+46011150 | None:intergenic |
| GTGTATTCTTCTAGTGCTAA+TGG | 0.339241 | 1_4:-46011075 | Msa0165430:CDS |
| TGCAAAGCATTTGCATCTCT+TGG | 0.342800 | 1_4:+46011571 | None:intergenic |
| CATTGTGAAGGATGGCCTTT+CGG | 0.363378 | 1_4:-46010949 | Msa0165430:CDS |
| TTGACCTGCTTCATTGATAG+TGG | 0.371174 | 1_4:+46011723 | None:intergenic |
| ACACATAATTCTCTTGTTGC+AGG | 0.374763 | 1_4:+46011189 | None:intergenic |
| TGTATTCTTCTAGTGCTAAT+GGG | 0.374850 | 1_4:-46011074 | Msa0165430:CDS |
| TTGCATCTCTTGGAATGGTT+TGG | 0.387372 | 1_4:+46011581 | None:intergenic |
| CATATAAATTCAAGTAACTT+TGG | 0.429792 | 1_4:+46010843 | None:intergenic |
| TAGTGATCTTGATGAAGAAC+AGG | 0.434961 | 1_4:-46011459 | Msa0165430:CDS |
| TTTCTGGCTTTAATCAGAAT+AGG | 0.450498 | 1_4:+46010800 | None:intergenic |
| ATTCAAGTAACTTTGGTACT+TGG | 0.457278 | 1_4:+46010850 | None:intergenic |
| TTTACTTTCAGTTTCACAAT+GGG | 0.475858 | 1_4:-46011629 | Msa0165430:exon |
| ATGCTTTGCAGCTGCTCTGA+AGG | 0.476673 | 1_4:-46011558 | Msa0165430:CDS |
| TAATTGGAAACTCCTCTTCA+AGG | 0.478540 | 1_4:+46011480 | None:intergenic |
| AGTTGACTTGTTAACTATGC+TGG | 0.478932 | 1_4:-46010679 | Msa0165430:three_prime_UTR |
| GGTTTGGTTGCTCCTCCTCA+TGG | 0.490726 | 1_4:+46011597 | None:intergenic |
| GGCGGTTAGAAGCCGAGCTA+TGG | 0.496315 | 1_4:-46011268 | Msa0165430:CDS |
| AGAAATGTAAGAATCAGAAC+TGG | 0.513218 | 1_4:-46010782 | Msa0165430:three_prime_UTR |
| AAACTCTCTCTCAGTAGGCT+TGG | 0.513974 | 1_4:+46011228 | None:intergenic |
| CTAAGTCACCATCTGAATCA+TGG | 0.518553 | 1_4:-46010891 | Msa0165430:CDS |
| AGCATTTGCATCTCTTGGAA+TGG | 0.526952 | 1_4:+46011576 | None:intergenic |
| CAAGAGAATTATGTGTTACT+GGG | 0.534810 | 1_4:-46011182 | Msa0165430:CDS |
| TTCGACCAAAAGTTTGACAC+TGG | 0.545482 | 1_4:+46011525 | None:intergenic |
| TCTTCTAGTGCTAATGGGGA+AGG | 0.547226 | 1_4:-46011069 | Msa0165430:CDS |
| CTTAACTTTACCTTAAAGGA+CGG | 0.549608 | 1_4:-46011780 | Msa0165430:five_prime_UTR |
| TAAAGGACGGAATGCTCTAG+TGG | 0.550594 | 1_4:-46011767 | Msa0165430:five_prime_UTR |
| TCAAGCTTGAACATCTTGAA+AGG | 0.551732 | 1_4:+46011025 | None:intergenic |
| AATGGAACCAAAGGCAAAGG+AGG | 0.558037 | 1_4:-46011157 | Msa0165430:CDS |
| TTCGACTACAAGCCTTGAAG+AGG | 0.565475 | 1_4:-46011492 | Msa0165430:CDS |
| TACTGGGAAAATGGAACCAA+AGG | 0.569555 | 1_4:-46011166 | Msa0165430:CDS |
| CGATACAACCATGATTCAGA+TGG | 0.575454 | 1_4:+46010883 | None:intergenic |
| AAGGCCACTATCAATGAAGC+AGG | 0.578192 | 1_4:-46011727 | Msa0165430:five_prime_UTR |
| AAAGGACGGAATGCTCTAGT+GGG | 0.578314 | 1_4:-46011766 | Msa0165430:five_prime_UTR |
| CATGATTCAGATGGTGACTT+AGG | 0.584417 | 1_4:+46010892 | None:intergenic |
| ATTTACTTTCAGTTTCACAA+TGG | 0.590773 | 1_4:-46011630 | Msa0165430:exon |
| TCGACCAAAAGTTTGACACT+GGG | 0.608137 | 1_4:+46011526 | None:intergenic |
| GTATTCTTCTAGTGCTAATG+GGG | 0.608962 | 1_4:-46011073 | Msa0165430:CDS |
| GATGGTGACTTAGGCAGTGG+TGG | 0.623202 | 1_4:+46010901 | None:intergenic |
| GGGGTTTCAATATTGCTGCA+AGG | 0.632160 | 1_4:-46011746 | Msa0165430:five_prime_UTR |
| GAAAATGGAACCAAAGGCAA+AGG | 0.636908 | 1_4:-46011160 | Msa0165430:CDS |
| ATGGAACCAAAGGCAAAGGA+GGG | 0.641016 | 1_4:-46011156 | Msa0165430:CDS |
| GCTTTACGACAGAGACCGAA+AGG | 0.645910 | 1_4:+46010934 | None:intergenic |
| GAGGGAGGTAATGAAGAACA+AGG | 0.652290 | 1_4:-46011138 | Msa0165430:CDS |
| TCAGATGGTGACTTAGGCAG+TGG | 0.663320 | 1_4:+46010898 | None:intergenic |
| GAACCAAAGGCAAAGGAGGG+AGG | 0.663364 | 1_4:-46011153 | Msa0165430:CDS |
| TCTTCAGGTGATTGTCTCGG+CGG | 0.664433 | 1_4:-46011286 | Msa0165430:intron |
| AAGGACGGAATGCTCTAGTG+GGG | 0.669921 | 1_4:-46011765 | Msa0165430:five_prime_UTR |
| TGTTGCAGGAGAATATACCC+AGG | 0.714302 | 1_4:+46011203 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAAAATAGTTTGATTTTA+AGG | + | chr1_4:46011157-46011176 | None:intergenic | 15.0% |
| !!! | TCAAAAATAGTTTGATTTTA+AGG | + | chr1_4:46011157-46011176 | None:intergenic | 15.0% |
| !!! | CCATAAAGTGTATTATTTTA+GGG | - | chr1_4:46010747-46010766 | Msa0165430:three_prime_UTR | 20.0% |
| !! | TTAACTTAACTTTACCTTAA+AGG | - | chr1_4:46010775-46010794 | Msa0165430:three_prime_UTR | 20.0% |
| !! | TATGCAAGATGTTTATATAT+TGG | + | chr1_4:46010896-46010915 | None:intergenic | 20.0% |
| !! | CATATAAATTCAAGTAACTT+TGG | + | chr1_4:46011719-46011738 | None:intergenic | 20.0% |
| !! | CAAAGTTACTTGAATTTATA+TGG | - | chr1_4:46011717-46011736 | Msa0165430:five_prime_UTR | 20.0% |
| !!! | CCATAAAGTGTATTATTTTA+GGG | - | chr1_4:46010747-46010766 | Msa0165430:three_prime_UTR | 20.0% |
| !! | TTAACTTAACTTTACCTTAA+AGG | - | chr1_4:46010775-46010794 | Msa0165430:three_prime_UTR | 20.0% |
| !! | TATGCAAGATGTTTATATAT+TGG | + | chr1_4:46010896-46010915 | None:intergenic | 20.0% |
| !! | CATATAAATTCAAGTAACTT+TGG | + | chr1_4:46011719-46011738 | None:intergenic | 20.0% |
| !! | CAAAGTTACTTGAATTTATA+TGG | - | chr1_4:46011717-46011736 | Msa0165430:five_prime_UTR | 20.0% |
| !! | GCCATAAAGTGTATTATTTT+AGG | - | chr1_4:46010746-46010765 | Msa0165430:three_prime_UTR | 25.0% |
| ! | CCCTAAAATAATACACTTTA+TGG | + | chr1_4:46010750-46010769 | None:intergenic | 25.0% |
| ! | ATTTACTTTCAGTTTCACAA+TGG | - | chr1_4:46010929-46010948 | Msa0165430:CDS | 25.0% |
| ! | TTTACTTTCAGTTTCACAAT+GGG | - | chr1_4:46010930-46010949 | Msa0165430:CDS | 25.0% |
| !!! | TAGTTTGATTTTAAGGTTGA+AGG | + | chr1_4:46011150-46011169 | None:intergenic | 25.0% |
| !! | AATTAGTTATCGTTCTTTTG+TGG | - | chr1_4:46011247-46011266 | Msa0165430:CDS | 25.0% |
| !!! | CTTGAATGATTTTGATTTGT+CGG | - | chr1_4:46011552-46011571 | Msa0165430:CDS | 25.0% |
| !!! | ATTTTGATTTGTCGGAATAT+TGG | - | chr1_4:46011560-46011579 | Msa0165430:CDS | 25.0% |
| ! | TGGTTGAACATTATTGAATA+AGG | - | chr1_4:46011797-46011816 | Msa0165430:five_prime_UTR | 25.0% |
| !! | GCCATAAAGTGTATTATTTT+AGG | - | chr1_4:46010746-46010765 | Msa0165430:three_prime_UTR | 25.0% |
| ! | CCCTAAAATAATACACTTTA+TGG | + | chr1_4:46010750-46010769 | None:intergenic | 25.0% |
| ! | ATTTACTTTCAGTTTCACAA+TGG | - | chr1_4:46010929-46010948 | Msa0165430:CDS | 25.0% |
| ! | TTTACTTTCAGTTTCACAAT+GGG | - | chr1_4:46010930-46010949 | Msa0165430:CDS | 25.0% |
| !!! | TAGTTTGATTTTAAGGTTGA+AGG | + | chr1_4:46011150-46011169 | None:intergenic | 25.0% |
| !! | AATTAGTTATCGTTCTTTTG+TGG | - | chr1_4:46011247-46011266 | Msa0165430:CDS | 25.0% |
| !!! | CTTGAATGATTTTGATTTGT+CGG | - | chr1_4:46011552-46011571 | Msa0165430:CDS | 25.0% |
| !!! | ATTTTGATTTGTCGGAATAT+TGG | - | chr1_4:46011560-46011579 | Msa0165430:CDS | 25.0% |
| ! | TGGTTGAACATTATTGAATA+AGG | - | chr1_4:46011797-46011816 | Msa0165430:five_prime_UTR | 25.0% |
| CTTAACTTTACCTTAAAGGA+CGG | - | chr1_4:46010779-46010798 | Msa0165430:three_prime_UTR | 30.0% | |
| TCTTCATCAAGATCACTAAT+TGG | + | chr1_4:46011098-46011117 | None:intergenic | 30.0% | |
| ACAAGAGAATTATGTGTTAC+TGG | - | chr1_4:46011376-46011395 | Msa0165430:intron | 30.0% | |
| ! | CAAGAGAATTATGTGTTACT+GGG | - | chr1_4:46011377-46011396 | Msa0165430:intron | 30.0% |
| ! | ATTATGTGTTACTGGGAAAA+TGG | - | chr1_4:46011384-46011403 | Msa0165430:intron | 30.0% |
| ! | TGAAAGAGAAGAGTTTTTGT+CGG | - | chr1_4:46011444-46011463 | Msa0165430:intron | 30.0% |
| TGTATTCTTCTAGTGCTAAT+GGG | - | chr1_4:46011485-46011504 | Msa0165430:CDS | 30.0% | |
| ATTCAAGTAACTTTGGTACT+TGG | + | chr1_4:46011712-46011731 | None:intergenic | 30.0% | |
| !! | TTTCTGGCTTTAATCAGAAT+AGG | + | chr1_4:46011762-46011781 | None:intergenic | 30.0% |
| ! | AGTTCTGATTCTTACATTTC+TGG | + | chr1_4:46011778-46011797 | None:intergenic | 30.0% |
| AGAAATGTAAGAATCAGAAC+TGG | - | chr1_4:46011777-46011796 | Msa0165430:five_prime_UTR | 30.0% | |
| CTTAACTTTACCTTAAAGGA+CGG | - | chr1_4:46010779-46010798 | Msa0165430:three_prime_UTR | 30.0% | |
| TCTTCATCAAGATCACTAAT+TGG | + | chr1_4:46011098-46011117 | None:intergenic | 30.0% | |
| ACAAGAGAATTATGTGTTAC+TGG | - | chr1_4:46011376-46011395 | Msa0165430:intron | 30.0% | |
| ! | CAAGAGAATTATGTGTTACT+GGG | - | chr1_4:46011377-46011396 | Msa0165430:intron | 30.0% |
| ! | ATTATGTGTTACTGGGAAAA+TGG | - | chr1_4:46011384-46011403 | Msa0165430:intron | 30.0% |
| ! | TGAAAGAGAAGAGTTTTTGT+CGG | - | chr1_4:46011444-46011463 | Msa0165430:intron | 30.0% |
| TGTATTCTTCTAGTGCTAAT+GGG | - | chr1_4:46011485-46011504 | Msa0165430:CDS | 30.0% | |
| ATTCAAGTAACTTTGGTACT+TGG | + | chr1_4:46011712-46011731 | None:intergenic | 30.0% | |
| !! | TTTCTGGCTTTAATCAGAAT+AGG | + | chr1_4:46011762-46011781 | None:intergenic | 30.0% |
| ! | AGTTCTGATTCTTACATTTC+TGG | + | chr1_4:46011778-46011797 | None:intergenic | 30.0% |
| AGAAATGTAAGAATCAGAAC+TGG | - | chr1_4:46011777-46011796 | Msa0165430:five_prime_UTR | 30.0% | |
| CAATGAAGCAGGTCAATTAA+AGG | - | chr1_4:46010843-46010862 | Msa0165430:exon | 35.0% | |
| ! | TTTTCCCAGTGTCAAACTTT+TGG | - | chr1_4:46011029-46011048 | Msa0165430:CDS | 35.0% |
| TAATTGGAAACTCCTCTTCA+AGG | + | chr1_4:46011082-46011101 | None:intergenic | 35.0% | |
| TAGTGATCTTGATGAAGAAC+AGG | - | chr1_4:46011100-46011119 | Msa0165430:CDS | 35.0% | |
| ! | GTTCTTTTGTGGTTTTCTTC+AGG | - | chr1_4:46011258-46011277 | Msa0165430:CDS | 35.0% |
| ! | TTTTCTTCAGGTGATTGTCT+CGG | - | chr1_4:46011270-46011289 | Msa0165430:CDS | 35.0% |
| !! | TCTTTTGTTTCTCCATAGCT+CGG | + | chr1_4:46011306-46011325 | None:intergenic | 35.0% |
| ACACATAATTCTCTTGTTGC+AGG | + | chr1_4:46011373-46011392 | None:intergenic | 35.0% | |
| GTGTATTCTTCTAGTGCTAA+TGG | - | chr1_4:46011484-46011503 | Msa0165430:CDS | 35.0% | |
| GTATTCTTCTAGTGCTAATG+GGG | - | chr1_4:46011486-46011505 | Msa0165430:CDS | 35.0% | |
| TCAAGCTTGAACATCTTGAA+AGG | + | chr1_4:46011537-46011556 | None:intergenic | 35.0% | |
| !! | TTGGAAGCGTTCTATAATTC+AGG | - | chr1_4:46011579-46011598 | Msa0165430:CDS | 35.0% |
| !! | AGTTTTGTCATTGTGAAGGA+TGG | - | chr1_4:46011602-46011621 | Msa0165430:CDS | 35.0% |
| !! | AGTTGACTTGTTAACTATGC+TGG | - | chr1_4:46011880-46011899 | Msa0165430:five_prime_UTR | 35.0% |
| CAATGAAGCAGGTCAATTAA+AGG | - | chr1_4:46010843-46010862 | Msa0165430:exon | 35.0% | |
| ! | TTTTCCCAGTGTCAAACTTT+TGG | - | chr1_4:46011029-46011048 | Msa0165430:CDS | 35.0% |
| TAATTGGAAACTCCTCTTCA+AGG | + | chr1_4:46011082-46011101 | None:intergenic | 35.0% | |
| TAGTGATCTTGATGAAGAAC+AGG | - | chr1_4:46011100-46011119 | Msa0165430:CDS | 35.0% | |
| ! | GTTCTTTTGTGGTTTTCTTC+AGG | - | chr1_4:46011258-46011277 | Msa0165430:CDS | 35.0% |
| ! | TTTTCTTCAGGTGATTGTCT+CGG | - | chr1_4:46011270-46011289 | Msa0165430:CDS | 35.0% |
| !! | TCTTTTGTTTCTCCATAGCT+CGG | + | chr1_4:46011306-46011325 | None:intergenic | 35.0% |
| ACACATAATTCTCTTGTTGC+AGG | + | chr1_4:46011373-46011392 | None:intergenic | 35.0% | |
| GTGTATTCTTCTAGTGCTAA+TGG | - | chr1_4:46011484-46011503 | Msa0165430:CDS | 35.0% | |
| GTATTCTTCTAGTGCTAATG+GGG | - | chr1_4:46011486-46011505 | Msa0165430:CDS | 35.0% | |
| TCAAGCTTGAACATCTTGAA+AGG | + | chr1_4:46011537-46011556 | None:intergenic | 35.0% | |
| !! | TTGGAAGCGTTCTATAATTC+AGG | - | chr1_4:46011579-46011598 | Msa0165430:CDS | 35.0% |
| !! | AGTTTTGTCATTGTGAAGGA+TGG | - | chr1_4:46011602-46011621 | Msa0165430:CDS | 35.0% |
| !! | AGTTGACTTGTTAACTATGC+TGG | - | chr1_4:46011880-46011899 | Msa0165430:five_prime_UTR | 35.0% |
| TTGACCTGCTTCATTGATAG+TGG | + | chr1_4:46010839-46010858 | None:intergenic | 40.0% | |
| ! | AATGGGTGTTTTCTACCATG+AGG | - | chr1_4:46010947-46010966 | Msa0165430:CDS | 40.0% |
| TTGCATCTCTTGGAATGGTT+TGG | + | chr1_4:46010981-46011000 | None:intergenic | 40.0% | |
| AGCATTTGCATCTCTTGGAA+TGG | + | chr1_4:46010986-46011005 | None:intergenic | 40.0% | |
| ! | TGCAAAGCATTTGCATCTCT+TGG | + | chr1_4:46010991-46011010 | None:intergenic | 40.0% |
| TCGACCAAAAGTTTGACACT+GGG | + | chr1_4:46011036-46011055 | None:intergenic | 40.0% | |
| TTCGACCAAAAGTTTGACAC+TGG | + | chr1_4:46011037-46011056 | None:intergenic | 40.0% | |
| ! | AAACTTTTGGTCGAAGTCGA+AGG | - | chr1_4:46011042-46011061 | Msa0165430:CDS | 40.0% |
| AGGAAAAACTCTCTCTCAGT+AGG | + | chr1_4:46011339-46011358 | None:intergenic | 40.0% | |
| ! | TACTGAGAGAGAGTTTTTCC+TGG | - | chr1_4:46011338-46011357 | Msa0165430:intron | 40.0% |
| ! | ACTGAGAGAGAGTTTTTCCT+GGG | - | chr1_4:46011339-46011358 | Msa0165430:intron | 40.0% |
| TACTGGGAAAATGGAACCAA+AGG | - | chr1_4:46011393-46011412 | Msa0165430:intron | 40.0% | |
| GAAAATGGAACCAAAGGCAA+AGG | - | chr1_4:46011399-46011418 | Msa0165430:intron | 40.0% | |
| !! | CAGGAGTTTTGTCATTGTGA+AGG | - | chr1_4:46011598-46011617 | Msa0165430:CDS | 40.0% |
| CATGATTCAGATGGTGACTT+AGG | + | chr1_4:46011670-46011689 | None:intergenic | 40.0% | |
| CTAAGTCACCATCTGAATCA+TGG | - | chr1_4:46011668-46011687 | Msa0165430:five_prime_UTR | 40.0% | |
| CGATACAACCATGATTCAGA+TGG | + | chr1_4:46011679-46011698 | None:intergenic | 40.0% | |
| TTGACCTGCTTCATTGATAG+TGG | + | chr1_4:46010839-46010858 | None:intergenic | 40.0% | |
| ! | AATGGGTGTTTTCTACCATG+AGG | - | chr1_4:46010947-46010966 | Msa0165430:CDS | 40.0% |
| TTGCATCTCTTGGAATGGTT+TGG | + | chr1_4:46010981-46011000 | None:intergenic | 40.0% | |
| AGCATTTGCATCTCTTGGAA+TGG | + | chr1_4:46010986-46011005 | None:intergenic | 40.0% | |
| ! | TGCAAAGCATTTGCATCTCT+TGG | + | chr1_4:46010991-46011010 | None:intergenic | 40.0% |
| TCGACCAAAAGTTTGACACT+GGG | + | chr1_4:46011036-46011055 | None:intergenic | 40.0% | |
| TTCGACCAAAAGTTTGACAC+TGG | + | chr1_4:46011037-46011056 | None:intergenic | 40.0% | |
| ! | AAACTTTTGGTCGAAGTCGA+AGG | - | chr1_4:46011042-46011061 | Msa0165430:CDS | 40.0% |
| AGGAAAAACTCTCTCTCAGT+AGG | + | chr1_4:46011339-46011358 | None:intergenic | 40.0% | |
| ! | TACTGAGAGAGAGTTTTTCC+TGG | - | chr1_4:46011338-46011357 | Msa0165430:intron | 40.0% |
| ! | ACTGAGAGAGAGTTTTTCCT+GGG | - | chr1_4:46011339-46011358 | Msa0165430:intron | 40.0% |
| TACTGGGAAAATGGAACCAA+AGG | - | chr1_4:46011393-46011412 | Msa0165430:intron | 40.0% | |
| GAAAATGGAACCAAAGGCAA+AGG | - | chr1_4:46011399-46011418 | Msa0165430:intron | 40.0% | |
| !! | CAGGAGTTTTGTCATTGTGA+AGG | - | chr1_4:46011598-46011617 | Msa0165430:CDS | 40.0% |
| CATGATTCAGATGGTGACTT+AGG | + | chr1_4:46011670-46011689 | None:intergenic | 40.0% | |
| CTAAGTCACCATCTGAATCA+TGG | - | chr1_4:46011668-46011687 | Msa0165430:five_prime_UTR | 40.0% | |
| CGATACAACCATGATTCAGA+TGG | + | chr1_4:46011679-46011698 | None:intergenic | 40.0% | |
| ! | CTAGAGCATTCCGTCCTTTA+AGG | + | chr1_4:46010792-46010811 | None:intergenic | 45.0% |
| TAAAGGACGGAATGCTCTAG+TGG | - | chr1_4:46010792-46010811 | Msa0165430:three_prime_UTR | 45.0% | |
| AAAGGACGGAATGCTCTAGT+GGG | - | chr1_4:46010793-46010812 | Msa0165430:three_prime_UTR | 45.0% | |
| GGGGTTTCAATATTGCTGCA+AGG | - | chr1_4:46010813-46010832 | Msa0165430:three_prime_UTR | 45.0% | |
| AAGGCCACTATCAATGAAGC+AGG | - | chr1_4:46010832-46010851 | Msa0165430:three_prime_UTR | 45.0% | |
| TTCGACTACAAGCCTTGAAG+AGG | - | chr1_4:46011067-46011086 | Msa0165430:CDS | 45.0% | |
| AAACTCTCTCTCAGTAGGCT+TGG | + | chr1_4:46011334-46011353 | None:intergenic | 45.0% | |
| TGTTGCAGGAGAATATACCC+AGG | + | chr1_4:46011359-46011378 | None:intergenic | 45.0% | |
| AATGGAACCAAAGGCAAAGG+AGG | - | chr1_4:46011402-46011421 | Msa0165430:intron | 45.0% | |
| ATGGAACCAAAGGCAAAGGA+GGG | - | chr1_4:46011403-46011422 | Msa0165430:intron | 45.0% | |
| GAGGGAGGTAATGAAGAACA+AGG | - | chr1_4:46011421-46011440 | Msa0165430:intron | 45.0% | |
| TCTTCTAGTGCTAATGGGGA+AGG | - | chr1_4:46011490-46011509 | Msa0165430:CDS | 45.0% | |
| CATTGTGAAGGATGGCCTTT+CGG | - | chr1_4:46011610-46011629 | Msa0165430:CDS | 45.0% | |
| ! | CTAGAGCATTCCGTCCTTTA+AGG | + | chr1_4:46010792-46010811 | None:intergenic | 45.0% |
| TAAAGGACGGAATGCTCTAG+TGG | - | chr1_4:46010792-46010811 | Msa0165430:three_prime_UTR | 45.0% | |
| AAAGGACGGAATGCTCTAGT+GGG | - | chr1_4:46010793-46010812 | Msa0165430:three_prime_UTR | 45.0% | |
| GGGGTTTCAATATTGCTGCA+AGG | - | chr1_4:46010813-46010832 | Msa0165430:three_prime_UTR | 45.0% | |
| AAGGCCACTATCAATGAAGC+AGG | - | chr1_4:46010832-46010851 | Msa0165430:three_prime_UTR | 45.0% | |
| TTCGACTACAAGCCTTGAAG+AGG | - | chr1_4:46011067-46011086 | Msa0165430:CDS | 45.0% | |
| AAACTCTCTCTCAGTAGGCT+TGG | + | chr1_4:46011334-46011353 | None:intergenic | 45.0% | |
| TGTTGCAGGAGAATATACCC+AGG | + | chr1_4:46011359-46011378 | None:intergenic | 45.0% | |
| AATGGAACCAAAGGCAAAGG+AGG | - | chr1_4:46011402-46011421 | Msa0165430:intron | 45.0% | |
| ATGGAACCAAAGGCAAAGGA+GGG | - | chr1_4:46011403-46011422 | Msa0165430:intron | 45.0% | |
| GAGGGAGGTAATGAAGAACA+AGG | - | chr1_4:46011421-46011440 | Msa0165430:intron | 45.0% | |
| TCTTCTAGTGCTAATGGGGA+AGG | - | chr1_4:46011490-46011509 | Msa0165430:CDS | 45.0% | |
| CATTGTGAAGGATGGCCTTT+CGG | - | chr1_4:46011610-46011629 | Msa0165430:CDS | 45.0% | |
| AAGGACGGAATGCTCTAGTG+GGG | - | chr1_4:46010794-46010813 | Msa0165430:three_prime_UTR | 50.0% | |
| ! | GGGTGTTTTCTACCATGAGG+AGG | - | chr1_4:46010950-46010969 | Msa0165430:CDS | 50.0% |
| ATGCTTTGCAGCTGCTCTGA+AGG | - | chr1_4:46011001-46011020 | Msa0165430:CDS | 50.0% | |
| TCTTCAGGTGATTGTCTCGG+CGG | - | chr1_4:46011273-46011292 | Msa0165430:CDS | 50.0% | |
| TTACCTCCCTCCTTTGCCTT+TGG | + | chr1_4:46011412-46011431 | None:intergenic | 50.0% | |
| GCTTTACGACAGAGACCGAA+AGG | + | chr1_4:46011628-46011647 | None:intergenic | 50.0% | |
| TCAGATGGTGACTTAGGCAG+TGG | + | chr1_4:46011664-46011683 | None:intergenic | 50.0% | |
| AAGGACGGAATGCTCTAGTG+GGG | - | chr1_4:46010794-46010813 | Msa0165430:three_prime_UTR | 50.0% | |
| ! | GGGTGTTTTCTACCATGAGG+AGG | - | chr1_4:46010950-46010969 | Msa0165430:CDS | 50.0% |
| ATGCTTTGCAGCTGCTCTGA+AGG | - | chr1_4:46011001-46011020 | Msa0165430:CDS | 50.0% | |
| TCTTCAGGTGATTGTCTCGG+CGG | - | chr1_4:46011273-46011292 | Msa0165430:CDS | 50.0% | |
| TTACCTCCCTCCTTTGCCTT+TGG | + | chr1_4:46011412-46011431 | None:intergenic | 50.0% | |
| GCTTTACGACAGAGACCGAA+AGG | + | chr1_4:46011628-46011647 | None:intergenic | 50.0% | |
| TCAGATGGTGACTTAGGCAG+TGG | + | chr1_4:46011664-46011683 | None:intergenic | 50.0% | |
| ! | GGTTTGGTTGCTCCTCCTCA+TGG | + | chr1_4:46010965-46010984 | None:intergenic | 55.0% |
| GAACCAAAGGCAAAGGAGGG+AGG | - | chr1_4:46011406-46011425 | Msa0165430:intron | 55.0% | |
| GATGGTGACTTAGGCAGTGG+TGG | + | chr1_4:46011661-46011680 | None:intergenic | 55.0% | |
| ! | GGTTTGGTTGCTCCTCCTCA+TGG | + | chr1_4:46010965-46010984 | None:intergenic | 55.0% |
| GAACCAAAGGCAAAGGAGGG+AGG | - | chr1_4:46011406-46011425 | Msa0165430:intron | 55.0% | |
| GATGGTGACTTAGGCAGTGG+TGG | + | chr1_4:46011661-46011680 | None:intergenic | 55.0% | |
| GGCGGTTAGAAGCCGAGCTA+TGG | - | chr1_4:46011291-46011310 | Msa0165430:intron | 60.0% | |
| GGCGGTTAGAAGCCGAGCTA+TGG | - | chr1_4:46011291-46011310 | Msa0165430:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 46010673 | 46011908 | 46010673 | ID=Msa0165430;Name=Msa0165430 |
| chr1_4 | mRNA | 46010673 | 46011908 | 46010673 | ID=Msa0165430-mRNA-1;Parent=Msa0165430;Name=Msa0165430-mRNA-1;_AED=0.00;_eAED=0.00;_QI=275|1|1|1|1|1|2|179|208 |
| chr1_4 | exon | 46010673 | 46011301 | 46010673 | ID=Msa0165430-mRNA-1:exon:13208;Parent=Msa0165430-mRNA-1 |
| chr1_4 | exon | 46011457 | 46011908 | 46011457 | ID=Msa0165430-mRNA-1:exon:13207;Parent=Msa0165430-mRNA-1 |
| chr1_4 | five_prime_UTR | 46011634 | 46011908 | 46011634 | ID=Msa0165430-mRNA-1:five_prime_utr;Parent=Msa0165430-mRNA-1 |
| chr1_4 | CDS | 46011457 | 46011633 | 46011457 | ID=Msa0165430-mRNA-1:cds;Parent=Msa0165430-mRNA-1 |
| chr1_4 | CDS | 46010852 | 46011301 | 46010852 | ID=Msa0165430-mRNA-1:cds;Parent=Msa0165430-mRNA-1 |
| chr1_4 | three_prime_UTR | 46010673 | 46010851 | 46010673 | ID=Msa0165430-mRNA-1:three_prime_utr;Parent=Msa0165430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
