Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1335770 | XP_003589223.1 | 94.712 | 208 | 11 | 0 | 1 | 208 | 1 | 208 | 2.98e-143 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1335770 | G7I4F7 | 94.712 | 208 | 11 | 0 | 1 | 208 | 1 | 208 | 1.42e-143 | 407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa1335770 | -0.817036 | 4.061828e-52 | -8.615850e-47 |
| Msa0007080 | Msa1335770 | 0.805976 | 1.029133e-49 | -8.615850e-47 |
| Msa0038350 | Msa1335770 | -0.806774 | 6.985179e-50 | -8.615850e-47 |
| Msa0093400 | Msa1335770 | 0.804861 | 1.762666e-49 | -8.615850e-47 |
| Msa0094100 | Msa1335770 | 0.802888 | 4.530173e-49 | -8.615850e-47 |
| Msa0101810 | Msa1335770 | -0.807244 | 5.556202e-50 | -8.615850e-47 |
| Msa0102750 | Msa1335770 | 0.813365 | 2.655406e-51 | -8.615850e-47 |
| Msa0105420 | Msa1335770 | 0.829390 | 5.286994e-55 | -8.615850e-47 |
| Msa0653020 | Msa1335770 | 0.802136 | 6.474454e-49 | -8.615850e-47 |
| Msa0658570 | Msa1335770 | 0.831451 | 1.657390e-55 | -8.615850e-47 |
| Msa0692620 | Msa1335770 | 0.809499 | 1.836257e-50 | -8.615850e-47 |
| Msa0695410 | Msa1335770 | 0.805576 | 1.248725e-49 | -8.615850e-47 |
| Msa0701840 | Msa1335770 | -0.813302 | 2.741351e-51 | -8.615850e-47 |
| Msa0703490 | Msa1335770 | 0.842821 | 2.045495e-58 | -8.615850e-47 |
| Msa0715310 | Msa1335770 | 0.809648 | 1.705262e-50 | -8.615850e-47 |
| Msa0715720 | Msa1335770 | 0.807015 | 6.212220e-50 | -8.615850e-47 |
| Msa0718240 | Msa1335770 | 0.820804 | 5.653391e-53 | -8.615850e-47 |
| Msa0719490 | Msa1335770 | -0.813256 | 2.806715e-51 | -8.615850e-47 |
| Msa0722930 | Msa1335770 | 0.823894 | 1.083491e-53 | -8.615850e-47 |
| Msa0723140 | Msa1335770 | 0.828428 | 9.041300e-55 | -8.615850e-47 |
| Msa0736060 | Msa1335770 | 0.814900 | 1.217405e-51 | -8.615850e-47 |
| Msa0756630 | Msa1335770 | -0.803982 | 2.687814e-49 | -8.615850e-47 |
| Msa0764700 | Msa1335770 | 0.837254 | 5.792338e-57 | -8.615850e-47 |
| Msa0773610 | Msa1335770 | 0.809923 | 1.488120e-50 | -8.615850e-47 |
| Msa0777930 | Msa1335770 | 0.809614 | 1.734061e-50 | -8.615850e-47 |
| Msa0792510 | Msa1335770 | 0.823659 | 1.229802e-53 | -8.615850e-47 |
| Msa0795390 | Msa1335770 | 0.800785 | 1.224373e-48 | -8.615850e-47 |
| Msa0802470 | Msa1335770 | -0.825153 | 5.474479e-54 | -8.615850e-47 |
| Msa0806210 | Msa1335770 | 0.817685 | 2.900505e-52 | -8.615850e-47 |
| Msa0835920 | Msa1335770 | 0.803655 | 3.142608e-49 | -8.615850e-47 |
| Msa0839330 | Msa1335770 | 0.804921 | 1.712897e-49 | -8.615850e-47 |
| Msa0124110 | Msa1335770 | 0.828050 | 1.115244e-54 | -8.615850e-47 |
| Msa0140910 | Msa1335770 | 0.823853 | 1.107543e-53 | -8.615850e-47 |
| Msa0142240 | Msa1335770 | 0.809262 | 2.064127e-50 | -8.615850e-47 |
| Msa0145670 | Msa1335770 | 0.800574 | 1.352364e-48 | -8.615850e-47 |
| Msa0165430 | Msa1335770 | 0.990697 | 6.992479e-184 | -8.615850e-47 |
| Msa0185480 | Msa1335770 | 0.811604 | 6.442994e-51 | -8.615850e-47 |
| Msa0185640 | Msa1335770 | -0.818136 | 2.293907e-52 | -8.615850e-47 |
| Msa0190830 | Msa1335770 | 0.807505 | 4.892121e-50 | -8.615850e-47 |
| Msa0201330 | Msa1335770 | 0.830381 | 3.032117e-55 | -8.615850e-47 |
| Msa0201370 | Msa1335770 | 0.842158 | 3.067633e-58 | -8.615850e-47 |
| Msa0208390 | Msa1335770 | 0.823720 | 1.189552e-53 | -8.615850e-47 |
| Msa0211010 | Msa1335770 | 0.824332 | 8.549054e-54 | -8.615850e-47 |
| Msa0217400 | Msa1335770 | 0.843612 | 1.258845e-58 | -8.615850e-47 |
| Msa0225320 | Msa1335770 | 0.807392 | 5.170621e-50 | -8.615850e-47 |
| Msa0233190 | Msa1335770 | 0.811795 | 5.855834e-51 | -8.615850e-47 |
| Msa1228210 | Msa1335770 | 0.845789 | 3.262205e-59 | -8.615850e-47 |
| Msa1256540 | Msa1335770 | -0.815154 | 1.069174e-51 | -8.615850e-47 |
| Msa1258950 | Msa1335770 | 0.804565 | 2.032184e-49 | -8.615850e-47 |
| Msa1264020 | Msa1335770 | 0.820148 | 7.993635e-53 | -8.615850e-47 |
| Msa1267200 | Msa1335770 | 0.804037 | 2.617438e-49 | -8.615850e-47 |
| Msa1271280 | Msa1335770 | 0.832450 | 9.388216e-56 | -8.615850e-47 |
| Msa1271300 | Msa1335770 | 0.854996 | 8.480860e-62 | -8.615850e-47 |
| Msa1278840 | Msa1335770 | 0.809606 | 1.741569e-50 | -8.615850e-47 |
| Msa1283860 | Msa1335770 | 0.807738 | 4.365049e-50 | -8.615850e-47 |
| Msa1296960 | Msa1335770 | -0.826188 | 3.110629e-54 | -8.615850e-47 |
| Msa1308380 | Msa1335770 | 0.813709 | 2.231139e-51 | -8.615850e-47 |
| Msa1322890 | Msa1335770 | 0.814269 | 1.678870e-51 | -8.615850e-47 |
| Msa1327050 | Msa1335770 | 0.811659 | 6.267376e-51 | -8.615850e-47 |
| Msa1329990 | Msa1335770 | 0.802523 | 5.388252e-49 | -8.615850e-47 |
| Msa1335770 | Msa1350840 | 0.804424 | 2.174554e-49 | -8.615850e-47 |
| Msa1335770 | Msa1358870 | -0.815460 | 9.141335e-52 | -8.615850e-47 |
| Msa1335770 | Msa1363890 | 0.820521 | 6.563403e-53 | -8.615850e-47 |
| Msa1335770 | Msa1367080 | 0.812497 | 4.115840e-51 | -8.615850e-47 |
| Msa1335770 | Msa1373950 | 0.822295 | 2.557450e-53 | -8.615850e-47 |
| Msa1335770 | Msa1376890 | 0.831236 | 1.871094e-55 | -8.615850e-47 |
| Msa1335770 | Msa1414740 | 0.840197 | 1.004983e-57 | -8.615850e-47 |
| Msa1335770 | Msa1423080 | 0.804200 | 2.421095e-49 | -8.615850e-47 |
| Msa1335770 | Msa1427760 | 0.806633 | 7.481192e-50 | -8.615850e-47 |
| Msa1335770 | Msa1437190 | 0.807188 | 5.710630e-50 | -8.615850e-47 |
| Msa1335770 | Msa1447440 | 0.807858 | 4.116527e-50 | -8.615850e-47 |
| Msa1335770 | Msa1453710 | 0.803725 | 3.039272e-49 | -8.615850e-47 |
| Msa1335770 | Msa1465900 | 0.818777 | 1.641666e-52 | -8.615850e-47 |
| Msa0365360 | Msa1335770 | 0.805595 | 1.237361e-49 | -8.615850e-47 |
| Msa0369360 | Msa1335770 | 0.829992 | 3.772830e-55 | -8.615850e-47 |
| Msa0371540 | Msa1335770 | 0.803324 | 3.681541e-49 | -8.615850e-47 |
| Msa0414950 | Msa1335770 | -0.802332 | 5.899081e-49 | -8.615850e-47 |
| Msa0416800 | Msa1335770 | 0.830060 | 3.632734e-55 | -8.615850e-47 |
| Msa0437710 | Msa1335770 | 0.809277 | 2.048448e-50 | -8.615850e-47 |
| Msa0448550 | Msa1335770 | -0.813736 | 2.201314e-51 | -8.615850e-47 |
| Msa0457370 | Msa1335770 | 0.802446 | 5.588553e-49 | -8.615850e-47 |
| Msa0463460 | Msa1335770 | 0.821446 | 4.019683e-53 | -8.615850e-47 |
| Msa0466060 | Msa1335770 | 0.807765 | 4.306791e-50 | -8.615850e-47 |
| Msa0467900 | Msa1335770 | -0.800301 | 1.537170e-48 | -8.615850e-47 |
| Msa0996130 | Msa1335770 | 0.801016 | 1.098509e-48 | -8.615850e-47 |
| Msa1000020 | Msa1335770 | 0.832729 | 8.005681e-56 | -8.615850e-47 |
| Msa1001200 | Msa1335770 | 0.806258 | 8.974938e-50 | -8.615850e-47 |
| Msa1008490 | Msa1335770 | 0.832419 | 9.555136e-56 | -8.615850e-47 |
| Msa1009000 | Msa1335770 | 0.814882 | 1.228782e-51 | -8.615850e-47 |
| Msa1009020 | Msa1335770 | 0.810668 | 1.028256e-50 | -8.615850e-47 |
| Msa1019020 | Msa1335770 | 0.824188 | 9.241587e-54 | -8.615850e-47 |
| Msa1026500 | Msa1335770 | 0.808662 | 2.774525e-50 | -8.615850e-47 |
| Msa1036390 | Msa1335770 | 0.826448 | 2.697534e-54 | -8.615850e-47 |
| Msa1040120 | Msa1335770 | 0.825557 | 4.392052e-54 | -8.615850e-47 |
| Msa1041730 | Msa1335770 | 0.817750 | 2.804983e-52 | -8.615850e-47 |
| Msa1043920 | Msa1335770 | 0.855096 | 7.934457e-62 | -8.615850e-47 |
| Msa1044090 | Msa1335770 | 0.830363 | 3.063634e-55 | -8.615850e-47 |
| Msa1075220 | Msa1335770 | -0.810486 | 1.125395e-50 | -8.615850e-47 |
| Msa1076680 | Msa1335770 | 0.827383 | 1.612784e-54 | -8.615850e-47 |
| Msa1081600 | Msa1335770 | 0.831425 | 1.681128e-55 | -8.615850e-47 |
| Msa1082500 | Msa1335770 | 0.803326 | 3.676562e-49 | -8.615850e-47 |
| Msa1083410 | Msa1335770 | 0.846168 | 2.573100e-59 | -8.615850e-47 |
| Msa1085300 | Msa1335770 | 0.804659 | 1.942423e-49 | -8.615850e-47 |
| Msa1098560 | Msa1335770 | 0.834275 | 3.293681e-56 | -8.615850e-47 |
| Msa1099030 | Msa1335770 | 0.800497 | 1.401861e-48 | -8.615850e-47 |
| Msa1104000 | Msa1335770 | 0.824974 | 6.034709e-54 | -8.615850e-47 |
| Msa0239130 | Msa1335770 | 0.822343 | 2.492669e-53 | -8.615850e-47 |
| Msa0243910 | Msa1335770 | 0.813868 | 2.058385e-51 | -8.615850e-47 |
| Msa0243930 | Msa1335770 | 0.853120 | 2.947763e-61 | -8.615850e-47 |
| Msa0254290 | Msa1335770 | 0.816997 | 4.143570e-52 | -8.615850e-47 |
| Msa0257250 | Msa1335770 | 0.847935 | 8.439618e-60 | -8.615850e-47 |
| Msa0265820 | Msa1335770 | 0.805587 | 1.241919e-49 | -8.615850e-47 |
| Msa0266000 | Msa1335770 | -0.837132 | 6.224274e-57 | -8.615850e-47 |
| Msa0275670 | Msa1335770 | 0.815082 | 1.109149e-51 | -8.615850e-47 |
| Msa0282590 | Msa1335770 | 0.837625 | 4.655183e-57 | -8.615850e-47 |
| Msa0290650 | Msa1335770 | 0.816027 | 6.834030e-52 | -8.615850e-47 |
| Msa0296560 | Msa1335770 | 0.827657 | 1.386295e-54 | -8.615850e-47 |
| Msa0297960 | Msa1335770 | 0.808884 | 2.487381e-50 | -8.615850e-47 |
| Msa0311580 | Msa1335770 | 0.812466 | 4.180052e-51 | -8.615850e-47 |
| Msa0313990 | Msa1335770 | 0.805298 | 1.428357e-49 | -8.615850e-47 |
| Msa0331590 | Msa1335770 | 0.805264 | 1.451712e-49 | -8.615850e-47 |
| Msa0333720 | Msa1335770 | -0.811728 | 6.055011e-51 | -8.615850e-47 |
| Msa0335040 | Msa1335770 | 0.828452 | 8.921721e-55 | -8.615850e-47 |
| Msa0342340 | Msa1335770 | -0.819851 | 9.349652e-53 | -8.615850e-47 |
| Msa0356890 | Msa1335770 | -0.810136 | 1.339195e-50 | -8.615850e-47 |
| Msa0362740 | Msa1335770 | 0.813168 | 2.934480e-51 | -8.615850e-47 |
| Msa1111760 | Msa1335770 | 0.809664 | 1.692462e-50 | -8.615850e-47 |
| Msa1116130 | Msa1335770 | -0.802757 | 4.822492e-49 | -8.615850e-47 |
| Msa1125040 | Msa1335770 | 0.806267 | 8.936486e-50 | -8.615850e-47 |
| Msa1125080 | Msa1335770 | 0.826811 | 2.210695e-54 | -8.615850e-47 |
| Msa1128160 | Msa1335770 | 0.835112 | 2.028215e-56 | -8.615850e-47 |
| Msa1130270 | Msa1335770 | -0.813791 | 2.140310e-51 | -8.615850e-47 |
| Msa1139000 | Msa1335770 | -0.807942 | 3.950378e-50 | -8.615850e-47 |
| Msa1139240 | Msa1335770 | 0.803578 | 3.261298e-49 | -8.615850e-47 |
| Msa1147570 | Msa1335770 | 0.822445 | 2.360231e-53 | -8.615850e-47 |
| Msa1154070 | Msa1335770 | 0.819689 | 1.017668e-52 | -8.615850e-47 |
| Msa1154820 | Msa1335770 | 0.800440 | 1.439637e-48 | -8.615850e-47 |
| Msa1162550 | Msa1335770 | -0.801942 | 7.097378e-49 | -8.615850e-47 |
| Msa1165360 | Msa1335770 | 0.837665 | 4.545953e-57 | -8.615850e-47 |
| Msa1166370 | Msa1335770 | 0.837868 | 4.032036e-57 | -8.615850e-47 |
| Msa1167220 | Msa1335770 | 0.819905 | 9.086844e-53 | -8.615850e-47 |
| Msa1167400 | Msa1335770 | 0.803323 | 3.683223e-49 | -8.615850e-47 |
| Msa1204980 | Msa1335770 | -0.808004 | 3.832718e-50 | -8.615850e-47 |
| Msa1205010 | Msa1335770 | -0.813073 | 3.078048e-51 | -8.615850e-47 |
| Msa1208710 | Msa1335770 | 0.800528 | 1.381300e-48 | -8.615850e-47 |
| Msa1221200 | Msa1335770 | -0.815378 | 9.532828e-52 | -8.615850e-47 |
| Msa1222970 | Msa1335770 | 0.825031 | 5.849161e-54 | -8.615850e-47 |
| Msa0509020 | Msa1335770 | 0.808411 | 3.138850e-50 | -8.615850e-47 |
| Msa0509970 | Msa1335770 | 0.811454 | 6.946076e-51 | -8.615850e-47 |
| Msa0517340 | Msa1335770 | 0.804975 | 1.669003e-49 | -8.615850e-47 |
| Msa0524890 | Msa1335770 | -0.800246 | 1.576683e-48 | -8.615850e-47 |
| Msa0543900 | Msa1335770 | 0.808512 | 2.986257e-50 | -8.615850e-47 |
| Msa0557680 | Msa1335770 | 0.818577 | 1.822535e-52 | -8.615850e-47 |
| Msa0567020 | Msa1335770 | 0.825902 | 3.637519e-54 | -8.615850e-47 |
| Msa0581760 | Msa1335770 | 0.812873 | 3.405842e-51 | -8.615850e-47 |
| Msa0843280 | Msa1335770 | 0.804479 | 2.117752e-49 | -8.615850e-47 |
| Msa0845590 | Msa1335770 | -0.812064 | 5.115368e-51 | -8.615850e-47 |
| Msa0867890 | Msa1335770 | 0.807600 | 4.670820e-50 | -8.615850e-47 |
| Msa0870530 | Msa1335770 | 0.809951 | 1.467967e-50 | -8.615850e-47 |
| Msa0880080 | Msa1335770 | 0.805150 | 1.533833e-49 | -8.615850e-47 |
| Msa0894890 | Msa1335770 | 0.819203 | 1.313565e-52 | -8.615850e-47 |
| Msa0896220 | Msa1335770 | 0.805190 | 1.504398e-49 | -8.615850e-47 |
| Msa0921630 | Msa1335770 | 0.802159 | 6.402002e-49 | -8.615850e-47 |
| Msa0951720 | Msa1335770 | 0.823116 | 1.647173e-53 | -8.615850e-47 |
| Msa0961420 | Msa1335770 | -0.801283 | 9.686988e-49 | -8.615850e-47 |
| Msa0965520 | Msa1335770 | 0.808910 | 2.454704e-50 | -8.615850e-47 |
| Msa0973150 | Msa1335770 | 0.816835 | 4.504486e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1335770 | MtrunA17_Chr1g0153711 | 94.712 | 208 | 11 | 0 | 1 | 208 | 1 | 208 | 2.74e-147 | 407 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1335770 | AT1G47410.1 | 38.000 | 200 | 88 | 6 | 21 | 208 | 9 | 184 | 7.76e-32 | 114 |
| Msa1335770 | AT1G47410.2 | 38.000 | 200 | 88 | 6 | 21 | 208 | 9 | 184 | 7.76e-32 | 114 |
Find 61 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGAGCATTCCGTCCTTTA+AGG | 0.089873 | tig0000674:-71816 | None:intergenic |
| CCCTAAAATAATACACTTTA+TGG | 0.093718 | tig0000674:-71774 | None:intergenic |
| TTAACTTAACTTTACCTTAA+AGG | 0.134585 | tig0000674:+71802 | Msa1335770:five_prime_UTR |
| AGTTCTGATTCTTACATTTC+TGG | 0.208989 | tig0000674:-72802 | None:intergenic |
| CAAAGTTACTTGAATTTATA+TGG | 0.221019 | tig0000674:+72744 | Msa1335770:exon |
| TATGCAAGATGTTTATATAT+TGG | 0.257296 | tig0000674:-71920 | None:intergenic |
| TCTTCATCAAGATCACTAAT+TGG | 0.271099 | tig0000674:-72122 | None:intergenic |
| ATTATGTGTTACTGGGAAAA+TGG | 0.272982 | tig0000674:+72411 | Msa1335770:CDS |
| TGGTTGAACATTATTGAATA+AGG | 0.278431 | tig0000674:+72824 | Msa1335770:three_prime_UTR |
| TTGGAAGCGTTCTATAATTC+AGG | 0.285690 | tig0000674:+72606 | Msa1335770:CDS |
| ACAAGAGAATTATGTGTTAC+TGG | 0.321124 | tig0000674:+72403 | Msa1335770:CDS |
| CAATGAAGCAGGTCAATTAA+AGG | 0.321544 | tig0000674:+71870 | Msa1335770:five_prime_UTR |
| TTACCTCCCTCCTTTGCCTT+TGG | 0.326286 | tig0000674:-72436 | None:intergenic |
| GTGTATTCTTCTAGTGCTAA+TGG | 0.339241 | tig0000674:+72511 | Msa1335770:CDS |
| TGCAAAGCATTTGCATCTCT+TGG | 0.342800 | tig0000674:-72015 | None:intergenic |
| CATTGTGAAGGATGGCCTTT+CGG | 0.363378 | tig0000674:+72637 | Msa1335770:CDS |
| TTGACCTGCTTCATTGATAG+TGG | 0.371174 | tig0000674:-71863 | None:intergenic |
| ACACATAATTCTCTTGTTGC+AGG | 0.374763 | tig0000674:-72397 | None:intergenic |
| TGTATTCTTCTAGTGCTAAT+GGG | 0.374850 | tig0000674:+72512 | Msa1335770:CDS |
| TTGCATCTCTTGGAATGGTT+TGG | 0.387372 | tig0000674:-72005 | None:intergenic |
| CATATAAATTCAAGTAACTT+TGG | 0.429792 | tig0000674:-72743 | None:intergenic |
| TAGTGATCTTGATGAAGAAC+AGG | 0.434961 | tig0000674:+72127 | Msa1335770:CDS |
| TTTCTGGCTTTAATCAGAAT+AGG | 0.450498 | tig0000674:-72786 | None:intergenic |
| ATTCAAGTAACTTTGGTACT+TGG | 0.457278 | tig0000674:-72736 | None:intergenic |
| TTTACTTTCAGTTTCACAAT+GGG | 0.475858 | tig0000674:+71957 | Msa1335770:exon |
| ATGCTTTGCAGCTGCTCTGA+AGG | 0.476673 | tig0000674:+72028 | Msa1335770:CDS |
| TAATTGGAAACTCCTCTTCA+AGG | 0.478540 | tig0000674:-72106 | None:intergenic |
| AGTTGACTTGTTAACTATGC+TGG | 0.478932 | tig0000674:+72907 | Msa1335770:three_prime_UTR |
| GGTTTGGTTGCTCCTCCTCA+TGG | 0.490726 | tig0000674:-71989 | None:intergenic |
| GGCGGTTAGAAGCCGAGCTA+TGG | 0.496315 | tig0000674:+72318 | Msa1335770:CDS |
| AGAAATGTAAGAATCAGAAC+TGG | 0.513218 | tig0000674:+72804 | Msa1335770:three_prime_UTR |
| AAACTCTCTCTCAGTAGGCT+TGG | 0.513974 | tig0000674:-72358 | None:intergenic |
| CTAAGTCACCATCTGAATCA+TGG | 0.518553 | tig0000674:+72695 | Msa1335770:CDS |
| AGCATTTGCATCTCTTGGAA+TGG | 0.526952 | tig0000674:-72010 | None:intergenic |
| CAAGAGAATTATGTGTTACT+GGG | 0.534810 | tig0000674:+72404 | Msa1335770:CDS |
| TTCGACCAAAAGTTTGACAC+TGG | 0.545482 | tig0000674:-72061 | None:intergenic |
| TCTTCTAGTGCTAATGGGGA+AGG | 0.547226 | tig0000674:+72517 | Msa1335770:CDS |
| CTTAACTTTACCTTAAAGGA+CGG | 0.549608 | tig0000674:+71806 | Msa1335770:five_prime_UTR |
| TAAAGGACGGAATGCTCTAG+TGG | 0.550594 | tig0000674:+71819 | Msa1335770:five_prime_UTR |
| TCAAGCTTGAACATCTTGAA+AGG | 0.551732 | tig0000674:-72561 | None:intergenic |
| AATGGAACCAAAGGCAAAGG+AGG | 0.558037 | tig0000674:+72429 | Msa1335770:CDS |
| TTCGACTACAAGCCTTGAAG+AGG | 0.565475 | tig0000674:+72094 | Msa1335770:CDS |
| TACTGGGAAAATGGAACCAA+AGG | 0.569555 | tig0000674:+72420 | Msa1335770:CDS |
| CGATACAACCATGATTCAGA+TGG | 0.575454 | tig0000674:-72703 | None:intergenic |
| AAGGCCACTATCAATGAAGC+AGG | 0.578192 | tig0000674:+71859 | Msa1335770:five_prime_UTR |
| AAAGGACGGAATGCTCTAGT+GGG | 0.578314 | tig0000674:+71820 | Msa1335770:five_prime_UTR |
| CATGATTCAGATGGTGACTT+AGG | 0.584417 | tig0000674:-72694 | None:intergenic |
| ATTTACTTTCAGTTTCACAA+TGG | 0.590773 | tig0000674:+71956 | Msa1335770:exon |
| TCGACCAAAAGTTTGACACT+GGG | 0.608137 | tig0000674:-72060 | None:intergenic |
| GTATTCTTCTAGTGCTAATG+GGG | 0.608962 | tig0000674:+72513 | Msa1335770:CDS |
| GATGGTGACTTAGGCAGTGG+TGG | 0.623202 | tig0000674:-72685 | None:intergenic |
| GGGGTTTCAATATTGCTGCA+AGG | 0.632160 | tig0000674:+71840 | Msa1335770:five_prime_UTR |
| GAAAATGGAACCAAAGGCAA+AGG | 0.636908 | tig0000674:+72426 | Msa1335770:CDS |
| ATGGAACCAAAGGCAAAGGA+GGG | 0.641016 | tig0000674:+72430 | Msa1335770:CDS |
| GCTTTACGACAGAGACCGAA+AGG | 0.645910 | tig0000674:-72652 | None:intergenic |
| GAGGGAGGTAATGAAGAACA+AGG | 0.652290 | tig0000674:+72448 | Msa1335770:CDS |
| TCAGATGGTGACTTAGGCAG+TGG | 0.663320 | tig0000674:-72688 | None:intergenic |
| GAACCAAAGGCAAAGGAGGG+AGG | 0.663364 | tig0000674:+72433 | Msa1335770:CDS |
| TCTTCAGGTGATTGTCTCGG+CGG | 0.664433 | tig0000674:+72300 | Msa1335770:intron |
| AAGGACGGAATGCTCTAGTG+GGG | 0.669921 | tig0000674:+71821 | Msa1335770:five_prime_UTR |
| TGTTGCAGGAGAATATACCC+AGG | 0.714302 | tig0000674:-72383 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAAAATAGTTTGATTTTA+AGG | - | tig0000674:72184-72203 | None:intergenic | 15.0% |
| !!! | TCAAAAATAGTTTGATTTTA+AGG | - | tig0000674:72184-72203 | None:intergenic | 15.0% |
| !!! | CCATAAAGTGTATTATTTTA+GGG | + | tig0000674:71774-71793 | Msa1335770:five_prime_UTR | 20.0% |
| !! | TTAACTTAACTTTACCTTAA+AGG | + | tig0000674:71802-71821 | Msa1335770:five_prime_UTR | 20.0% |
| !! | TATGCAAGATGTTTATATAT+TGG | - | tig0000674:71923-71942 | None:intergenic | 20.0% |
| !! | CATATAAATTCAAGTAACTT+TGG | - | tig0000674:72746-72765 | None:intergenic | 20.0% |
| !! | CAAAGTTACTTGAATTTATA+TGG | + | tig0000674:72744-72763 | Msa1335770:exon | 20.0% |
| !!! | CCATAAAGTGTATTATTTTA+GGG | + | tig0000674:71774-71793 | Msa1335770:five_prime_UTR | 20.0% |
| !! | TTAACTTAACTTTACCTTAA+AGG | + | tig0000674:71802-71821 | Msa1335770:five_prime_UTR | 20.0% |
| !! | TATGCAAGATGTTTATATAT+TGG | - | tig0000674:71923-71942 | None:intergenic | 20.0% |
| !! | CATATAAATTCAAGTAACTT+TGG | - | tig0000674:72746-72765 | None:intergenic | 20.0% |
| !! | CAAAGTTACTTGAATTTATA+TGG | + | tig0000674:72744-72763 | Msa1335770:exon | 20.0% |
| !! | GCCATAAAGTGTATTATTTT+AGG | + | tig0000674:71773-71792 | Msa1335770:five_prime_UTR | 25.0% |
| ! | CCCTAAAATAATACACTTTA+TGG | - | tig0000674:71777-71796 | None:intergenic | 25.0% |
| ! | ATTTACTTTCAGTTTCACAA+TGG | + | tig0000674:71956-71975 | Msa1335770:exon | 25.0% |
| ! | TTTACTTTCAGTTTCACAAT+GGG | + | tig0000674:71957-71976 | Msa1335770:exon | 25.0% |
| !!! | TAGTTTGATTTTAAGGTTGA+AGG | - | tig0000674:72177-72196 | None:intergenic | 25.0% |
| !! | AATTAGTTATCGTTCTTTTG+TGG | + | tig0000674:72274-72293 | Msa1335770:intron | 25.0% |
| !!! | CTTGAATGATTTTGATTTGT+CGG | + | tig0000674:72579-72598 | Msa1335770:CDS | 25.0% |
| !!! | ATTTTGATTTGTCGGAATAT+TGG | + | tig0000674:72587-72606 | Msa1335770:CDS | 25.0% |
| ! | TGGTTGAACATTATTGAATA+AGG | + | tig0000674:72824-72843 | Msa1335770:three_prime_UTR | 25.0% |
| !! | GCCATAAAGTGTATTATTTT+AGG | + | tig0000674:71773-71792 | Msa1335770:five_prime_UTR | 25.0% |
| ! | CCCTAAAATAATACACTTTA+TGG | - | tig0000674:71777-71796 | None:intergenic | 25.0% |
| ! | ATTTACTTTCAGTTTCACAA+TGG | + | tig0000674:71956-71975 | Msa1335770:exon | 25.0% |
| ! | TTTACTTTCAGTTTCACAAT+GGG | + | tig0000674:71957-71976 | Msa1335770:exon | 25.0% |
| !!! | TAGTTTGATTTTAAGGTTGA+AGG | - | tig0000674:72177-72196 | None:intergenic | 25.0% |
| !! | AATTAGTTATCGTTCTTTTG+TGG | + | tig0000674:72274-72293 | Msa1335770:intron | 25.0% |
| !!! | CTTGAATGATTTTGATTTGT+CGG | + | tig0000674:72579-72598 | Msa1335770:CDS | 25.0% |
| !!! | ATTTTGATTTGTCGGAATAT+TGG | + | tig0000674:72587-72606 | Msa1335770:CDS | 25.0% |
| ! | TGGTTGAACATTATTGAATA+AGG | + | tig0000674:72824-72843 | Msa1335770:three_prime_UTR | 25.0% |
| CTTAACTTTACCTTAAAGGA+CGG | + | tig0000674:71806-71825 | Msa1335770:five_prime_UTR | 30.0% | |
| TCTTCATCAAGATCACTAAT+TGG | - | tig0000674:72125-72144 | None:intergenic | 30.0% | |
| ACAAGAGAATTATGTGTTAC+TGG | + | tig0000674:72403-72422 | Msa1335770:CDS | 30.0% | |
| ! | CAAGAGAATTATGTGTTACT+GGG | + | tig0000674:72404-72423 | Msa1335770:CDS | 30.0% |
| ! | ATTATGTGTTACTGGGAAAA+TGG | + | tig0000674:72411-72430 | Msa1335770:CDS | 30.0% |
| ! | TGAAAGAGAAGAGTTTTTGT+CGG | + | tig0000674:72471-72490 | Msa1335770:CDS | 30.0% |
| TGTATTCTTCTAGTGCTAAT+GGG | + | tig0000674:72512-72531 | Msa1335770:CDS | 30.0% | |
| ATTCAAGTAACTTTGGTACT+TGG | - | tig0000674:72739-72758 | None:intergenic | 30.0% | |
| !! | TTTCTGGCTTTAATCAGAAT+AGG | - | tig0000674:72789-72808 | None:intergenic | 30.0% |
| ! | AGTTCTGATTCTTACATTTC+TGG | - | tig0000674:72805-72824 | None:intergenic | 30.0% |
| AGAAATGTAAGAATCAGAAC+TGG | + | tig0000674:72804-72823 | Msa1335770:three_prime_UTR | 30.0% | |
| CTTAACTTTACCTTAAAGGA+CGG | + | tig0000674:71806-71825 | Msa1335770:five_prime_UTR | 30.0% | |
| TCTTCATCAAGATCACTAAT+TGG | - | tig0000674:72125-72144 | None:intergenic | 30.0% | |
| ACAAGAGAATTATGTGTTAC+TGG | + | tig0000674:72403-72422 | Msa1335770:CDS | 30.0% | |
| ! | CAAGAGAATTATGTGTTACT+GGG | + | tig0000674:72404-72423 | Msa1335770:CDS | 30.0% |
| ! | ATTATGTGTTACTGGGAAAA+TGG | + | tig0000674:72411-72430 | Msa1335770:CDS | 30.0% |
| ! | TGAAAGAGAAGAGTTTTTGT+CGG | + | tig0000674:72471-72490 | Msa1335770:CDS | 30.0% |
| TGTATTCTTCTAGTGCTAAT+GGG | + | tig0000674:72512-72531 | Msa1335770:CDS | 30.0% | |
| ATTCAAGTAACTTTGGTACT+TGG | - | tig0000674:72739-72758 | None:intergenic | 30.0% | |
| !! | TTTCTGGCTTTAATCAGAAT+AGG | - | tig0000674:72789-72808 | None:intergenic | 30.0% |
| ! | AGTTCTGATTCTTACATTTC+TGG | - | tig0000674:72805-72824 | None:intergenic | 30.0% |
| AGAAATGTAAGAATCAGAAC+TGG | + | tig0000674:72804-72823 | Msa1335770:three_prime_UTR | 30.0% | |
| CAATGAAGCAGGTCAATTAA+AGG | + | tig0000674:71870-71889 | Msa1335770:five_prime_UTR | 35.0% | |
| ! | TTTTCCCAGTGTCAAACTTT+TGG | + | tig0000674:72056-72075 | Msa1335770:CDS | 35.0% |
| TAATTGGAAACTCCTCTTCA+AGG | - | tig0000674:72109-72128 | None:intergenic | 35.0% | |
| TAGTGATCTTGATGAAGAAC+AGG | + | tig0000674:72127-72146 | Msa1335770:CDS | 35.0% | |
| ! | GTTCTTTTGTGGTTTTCTTC+AGG | + | tig0000674:72285-72304 | Msa1335770:intron | 35.0% |
| ! | TTTTCTTCAGGTGATTGTCT+CGG | + | tig0000674:72297-72316 | Msa1335770:intron | 35.0% |
| !! | TCTTTTGTTTCTCCATAGCT+CGG | - | tig0000674:72333-72352 | None:intergenic | 35.0% |
| ACACATAATTCTCTTGTTGC+AGG | - | tig0000674:72400-72419 | None:intergenic | 35.0% | |
| GTGTATTCTTCTAGTGCTAA+TGG | + | tig0000674:72511-72530 | Msa1335770:CDS | 35.0% | |
| GTATTCTTCTAGTGCTAATG+GGG | + | tig0000674:72513-72532 | Msa1335770:CDS | 35.0% | |
| TCAAGCTTGAACATCTTGAA+AGG | - | tig0000674:72564-72583 | None:intergenic | 35.0% | |
| !! | TTGGAAGCGTTCTATAATTC+AGG | + | tig0000674:72606-72625 | Msa1335770:CDS | 35.0% |
| !! | AGTTTTGTCATTGTGAAGGA+TGG | + | tig0000674:72629-72648 | Msa1335770:CDS | 35.0% |
| !! | AGTTGACTTGTTAACTATGC+TGG | + | tig0000674:72907-72926 | Msa1335770:three_prime_UTR | 35.0% |
| CAATGAAGCAGGTCAATTAA+AGG | + | tig0000674:71870-71889 | Msa1335770:five_prime_UTR | 35.0% | |
| ! | TTTTCCCAGTGTCAAACTTT+TGG | + | tig0000674:72056-72075 | Msa1335770:CDS | 35.0% |
| TAATTGGAAACTCCTCTTCA+AGG | - | tig0000674:72109-72128 | None:intergenic | 35.0% | |
| TAGTGATCTTGATGAAGAAC+AGG | + | tig0000674:72127-72146 | Msa1335770:CDS | 35.0% | |
| ! | GTTCTTTTGTGGTTTTCTTC+AGG | + | tig0000674:72285-72304 | Msa1335770:intron | 35.0% |
| ! | TTTTCTTCAGGTGATTGTCT+CGG | + | tig0000674:72297-72316 | Msa1335770:intron | 35.0% |
| !! | TCTTTTGTTTCTCCATAGCT+CGG | - | tig0000674:72333-72352 | None:intergenic | 35.0% |
| ACACATAATTCTCTTGTTGC+AGG | - | tig0000674:72400-72419 | None:intergenic | 35.0% | |
| GTGTATTCTTCTAGTGCTAA+TGG | + | tig0000674:72511-72530 | Msa1335770:CDS | 35.0% | |
| GTATTCTTCTAGTGCTAATG+GGG | + | tig0000674:72513-72532 | Msa1335770:CDS | 35.0% | |
| TCAAGCTTGAACATCTTGAA+AGG | - | tig0000674:72564-72583 | None:intergenic | 35.0% | |
| !! | TTGGAAGCGTTCTATAATTC+AGG | + | tig0000674:72606-72625 | Msa1335770:CDS | 35.0% |
| !! | AGTTTTGTCATTGTGAAGGA+TGG | + | tig0000674:72629-72648 | Msa1335770:CDS | 35.0% |
| !! | AGTTGACTTGTTAACTATGC+TGG | + | tig0000674:72907-72926 | Msa1335770:three_prime_UTR | 35.0% |
| TTGACCTGCTTCATTGATAG+TGG | - | tig0000674:71866-71885 | None:intergenic | 40.0% | |
| ! | AATGGGTGTTTTCTACCATG+AGG | + | tig0000674:71974-71993 | Msa1335770:exon | 40.0% |
| TTGCATCTCTTGGAATGGTT+TGG | - | tig0000674:72008-72027 | None:intergenic | 40.0% | |
| AGCATTTGCATCTCTTGGAA+TGG | - | tig0000674:72013-72032 | None:intergenic | 40.0% | |
| ! | TGCAAAGCATTTGCATCTCT+TGG | - | tig0000674:72018-72037 | None:intergenic | 40.0% |
| TCGACCAAAAGTTTGACACT+GGG | - | tig0000674:72063-72082 | None:intergenic | 40.0% | |
| TTCGACCAAAAGTTTGACAC+TGG | - | tig0000674:72064-72083 | None:intergenic | 40.0% | |
| ! | AAACTTTTGGTCGAAGTCGA+AGG | + | tig0000674:72069-72088 | Msa1335770:CDS | 40.0% |
| AGGAAAAACTCTCTCTCAGT+AGG | - | tig0000674:72366-72385 | None:intergenic | 40.0% | |
| ! | TACTGAGAGAGAGTTTTTCC+TGG | + | tig0000674:72365-72384 | Msa1335770:CDS | 40.0% |
| ! | ACTGAGAGAGAGTTTTTCCT+GGG | + | tig0000674:72366-72385 | Msa1335770:CDS | 40.0% |
| TACTGGGAAAATGGAACCAA+AGG | + | tig0000674:72420-72439 | Msa1335770:CDS | 40.0% | |
| GAAAATGGAACCAAAGGCAA+AGG | + | tig0000674:72426-72445 | Msa1335770:CDS | 40.0% | |
| !! | CAGGAGTTTTGTCATTGTGA+AGG | + | tig0000674:72625-72644 | Msa1335770:CDS | 40.0% |
| CATGATTCAGATGGTGACTT+AGG | - | tig0000674:72697-72716 | None:intergenic | 40.0% | |
| CTAAGTCACCATCTGAATCA+TGG | + | tig0000674:72695-72714 | Msa1335770:CDS | 40.0% | |
| CGATACAACCATGATTCAGA+TGG | - | tig0000674:72706-72725 | None:intergenic | 40.0% | |
| TTGACCTGCTTCATTGATAG+TGG | - | tig0000674:71866-71885 | None:intergenic | 40.0% | |
| ! | AATGGGTGTTTTCTACCATG+AGG | + | tig0000674:71974-71993 | Msa1335770:exon | 40.0% |
| TTGCATCTCTTGGAATGGTT+TGG | - | tig0000674:72008-72027 | None:intergenic | 40.0% | |
| AGCATTTGCATCTCTTGGAA+TGG | - | tig0000674:72013-72032 | None:intergenic | 40.0% | |
| ! | TGCAAAGCATTTGCATCTCT+TGG | - | tig0000674:72018-72037 | None:intergenic | 40.0% |
| TCGACCAAAAGTTTGACACT+GGG | - | tig0000674:72063-72082 | None:intergenic | 40.0% | |
| TTCGACCAAAAGTTTGACAC+TGG | - | tig0000674:72064-72083 | None:intergenic | 40.0% | |
| ! | AAACTTTTGGTCGAAGTCGA+AGG | + | tig0000674:72069-72088 | Msa1335770:CDS | 40.0% |
| AGGAAAAACTCTCTCTCAGT+AGG | - | tig0000674:72366-72385 | None:intergenic | 40.0% | |
| ! | TACTGAGAGAGAGTTTTTCC+TGG | + | tig0000674:72365-72384 | Msa1335770:CDS | 40.0% |
| ! | ACTGAGAGAGAGTTTTTCCT+GGG | + | tig0000674:72366-72385 | Msa1335770:CDS | 40.0% |
| TACTGGGAAAATGGAACCAA+AGG | + | tig0000674:72420-72439 | Msa1335770:CDS | 40.0% | |
| GAAAATGGAACCAAAGGCAA+AGG | + | tig0000674:72426-72445 | Msa1335770:CDS | 40.0% | |
| !! | CAGGAGTTTTGTCATTGTGA+AGG | + | tig0000674:72625-72644 | Msa1335770:CDS | 40.0% |
| CATGATTCAGATGGTGACTT+AGG | - | tig0000674:72697-72716 | None:intergenic | 40.0% | |
| CTAAGTCACCATCTGAATCA+TGG | + | tig0000674:72695-72714 | Msa1335770:CDS | 40.0% | |
| CGATACAACCATGATTCAGA+TGG | - | tig0000674:72706-72725 | None:intergenic | 40.0% | |
| ! | CTAGAGCATTCCGTCCTTTA+AGG | - | tig0000674:71819-71838 | None:intergenic | 45.0% |
| TAAAGGACGGAATGCTCTAG+TGG | + | tig0000674:71819-71838 | Msa1335770:five_prime_UTR | 45.0% | |
| AAAGGACGGAATGCTCTAGT+GGG | + | tig0000674:71820-71839 | Msa1335770:five_prime_UTR | 45.0% | |
| GGGGTTTCAATATTGCTGCA+AGG | + | tig0000674:71840-71859 | Msa1335770:five_prime_UTR | 45.0% | |
| AAGGCCACTATCAATGAAGC+AGG | + | tig0000674:71859-71878 | Msa1335770:five_prime_UTR | 45.0% | |
| TTCGACTACAAGCCTTGAAG+AGG | + | tig0000674:72094-72113 | Msa1335770:CDS | 45.0% | |
| AAACTCTCTCTCAGTAGGCT+TGG | - | tig0000674:72361-72380 | None:intergenic | 45.0% | |
| TGTTGCAGGAGAATATACCC+AGG | - | tig0000674:72386-72405 | None:intergenic | 45.0% | |
| AATGGAACCAAAGGCAAAGG+AGG | + | tig0000674:72429-72448 | Msa1335770:CDS | 45.0% | |
| ATGGAACCAAAGGCAAAGGA+GGG | + | tig0000674:72430-72449 | Msa1335770:CDS | 45.0% | |
| GAGGGAGGTAATGAAGAACA+AGG | + | tig0000674:72448-72467 | Msa1335770:CDS | 45.0% | |
| TCTTCTAGTGCTAATGGGGA+AGG | + | tig0000674:72517-72536 | Msa1335770:CDS | 45.0% | |
| CATTGTGAAGGATGGCCTTT+CGG | + | tig0000674:72637-72656 | Msa1335770:CDS | 45.0% | |
| ! | CTAGAGCATTCCGTCCTTTA+AGG | - | tig0000674:71819-71838 | None:intergenic | 45.0% |
| TAAAGGACGGAATGCTCTAG+TGG | + | tig0000674:71819-71838 | Msa1335770:five_prime_UTR | 45.0% | |
| AAAGGACGGAATGCTCTAGT+GGG | + | tig0000674:71820-71839 | Msa1335770:five_prime_UTR | 45.0% | |
| GGGGTTTCAATATTGCTGCA+AGG | + | tig0000674:71840-71859 | Msa1335770:five_prime_UTR | 45.0% | |
| AAGGCCACTATCAATGAAGC+AGG | + | tig0000674:71859-71878 | Msa1335770:five_prime_UTR | 45.0% | |
| TTCGACTACAAGCCTTGAAG+AGG | + | tig0000674:72094-72113 | Msa1335770:CDS | 45.0% | |
| AAACTCTCTCTCAGTAGGCT+TGG | - | tig0000674:72361-72380 | None:intergenic | 45.0% | |
| TGTTGCAGGAGAATATACCC+AGG | - | tig0000674:72386-72405 | None:intergenic | 45.0% | |
| AATGGAACCAAAGGCAAAGG+AGG | + | tig0000674:72429-72448 | Msa1335770:CDS | 45.0% | |
| ATGGAACCAAAGGCAAAGGA+GGG | + | tig0000674:72430-72449 | Msa1335770:CDS | 45.0% | |
| GAGGGAGGTAATGAAGAACA+AGG | + | tig0000674:72448-72467 | Msa1335770:CDS | 45.0% | |
| TCTTCTAGTGCTAATGGGGA+AGG | + | tig0000674:72517-72536 | Msa1335770:CDS | 45.0% | |
| CATTGTGAAGGATGGCCTTT+CGG | + | tig0000674:72637-72656 | Msa1335770:CDS | 45.0% | |
| AAGGACGGAATGCTCTAGTG+GGG | + | tig0000674:71821-71840 | Msa1335770:five_prime_UTR | 50.0% | |
| ! | GGGTGTTTTCTACCATGAGG+AGG | + | tig0000674:71977-71996 | Msa1335770:CDS | 50.0% |
| ATGCTTTGCAGCTGCTCTGA+AGG | + | tig0000674:72028-72047 | Msa1335770:CDS | 50.0% | |
| TCTTCAGGTGATTGTCTCGG+CGG | + | tig0000674:72300-72319 | Msa1335770:intron | 50.0% | |
| TTACCTCCCTCCTTTGCCTT+TGG | - | tig0000674:72439-72458 | None:intergenic | 50.0% | |
| GCTTTACGACAGAGACCGAA+AGG | - | tig0000674:72655-72674 | None:intergenic | 50.0% | |
| TCAGATGGTGACTTAGGCAG+TGG | - | tig0000674:72691-72710 | None:intergenic | 50.0% | |
| AAGGACGGAATGCTCTAGTG+GGG | + | tig0000674:71821-71840 | Msa1335770:five_prime_UTR | 50.0% | |
| ! | GGGTGTTTTCTACCATGAGG+AGG | + | tig0000674:71977-71996 | Msa1335770:CDS | 50.0% |
| ATGCTTTGCAGCTGCTCTGA+AGG | + | tig0000674:72028-72047 | Msa1335770:CDS | 50.0% | |
| TCTTCAGGTGATTGTCTCGG+CGG | + | tig0000674:72300-72319 | Msa1335770:intron | 50.0% | |
| TTACCTCCCTCCTTTGCCTT+TGG | - | tig0000674:72439-72458 | None:intergenic | 50.0% | |
| GCTTTACGACAGAGACCGAA+AGG | - | tig0000674:72655-72674 | None:intergenic | 50.0% | |
| TCAGATGGTGACTTAGGCAG+TGG | - | tig0000674:72691-72710 | None:intergenic | 50.0% | |
| ! | GGTTTGGTTGCTCCTCCTCA+TGG | - | tig0000674:71992-72011 | None:intergenic | 55.0% |
| GAACCAAAGGCAAAGGAGGG+AGG | + | tig0000674:72433-72452 | Msa1335770:CDS | 55.0% | |
| GATGGTGACTTAGGCAGTGG+TGG | - | tig0000674:72688-72707 | None:intergenic | 55.0% | |
| ! | GGTTTGGTTGCTCCTCCTCA+TGG | - | tig0000674:71992-72011 | None:intergenic | 55.0% |
| GAACCAAAGGCAAAGGAGGG+AGG | + | tig0000674:72433-72452 | Msa1335770:CDS | 55.0% | |
| GATGGTGACTTAGGCAGTGG+TGG | - | tig0000674:72688-72707 | None:intergenic | 55.0% | |
| GGCGGTTAGAAGCCGAGCTA+TGG | + | tig0000674:72318-72337 | Msa1335770:CDS | 60.0% | |
| GGCGGTTAGAAGCCGAGCTA+TGG | + | tig0000674:72318-72337 | Msa1335770:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0000674 | gene | 71700 | 72935 | 71700 | ID=Msa1335770;Name=Msa1335770 |
| tig0000674 | mRNA | 71700 | 72935 | 71700 | ID=Msa1335770-mRNA-1;Parent=Msa1335770;Name=Msa1335770-mRNA-1;_AED=0.00;_eAED=0.00;_QI=275|1|1|1|1|1|2|179|208 |
| tig0000674 | exon | 71700 | 72151 | 71700 | ID=Msa1335770-mRNA-1:exon:337;Parent=Msa1335770-mRNA-1 |
| tig0000674 | exon | 72307 | 72935 | 72307 | ID=Msa1335770-mRNA-1:exon:338;Parent=Msa1335770-mRNA-1 |
| tig0000674 | five_prime_UTR | 71700 | 71974 | 71700 | ID=Msa1335770-mRNA-1:five_prime_utr;Parent=Msa1335770-mRNA-1 |
| tig0000674 | CDS | 71975 | 72151 | 71975 | ID=Msa1335770-mRNA-1:cds;Parent=Msa1335770-mRNA-1 |
| tig0000674 | CDS | 72307 | 72756 | 72307 | ID=Msa1335770-mRNA-1:cds;Parent=Msa1335770-mRNA-1 |
| tig0000674 | three_prime_UTR | 72757 | 72935 | 72757 | ID=Msa1335770-mRNA-1:three_prime_utr;Parent=Msa1335770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
