Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524210 | XP_003604031.1 | 91.667 | 312 | 12 | 2 | 1 | 312 | 1 | 298 | 0.0 | 558 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524210 | G7J8H3 | 91.667 | 312 | 12 | 2 | 1 | 312 | 1 | 298 | 0.0 | 558 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0524210 | 0.820675 | 6.051458e-53 | -8.615850e-47 |
| Msa0017120 | Msa0524210 | 0.831027 | 2.105895e-55 | -8.615850e-47 |
| Msa0043680 | Msa0524210 | 0.820860 | 5.487179e-53 | -8.615850e-47 |
| Msa0065390 | Msa0524210 | 0.823051 | 1.705714e-53 | -8.615850e-47 |
| Msa0077410 | Msa0524210 | 0.845239 | 4.597606e-59 | -8.615850e-47 |
| Msa0092660 | Msa0524210 | 0.821296 | 4.354781e-53 | -8.615850e-47 |
| Msa0092730 | Msa0524210 | 0.822434 | 2.374082e-53 | -8.615850e-47 |
| Msa0094420 | Msa0524210 | 0.813854 | 2.073448e-51 | -8.615850e-47 |
| Msa0103780 | Msa0524210 | 0.826845 | 2.168968e-54 | -8.615850e-47 |
| Msa0110710 | Msa0524210 | 0.827090 | 1.895727e-54 | -8.615850e-47 |
| Msa0135980 | Msa0524210 | 0.817963 | 2.510042e-52 | -8.615850e-47 |
| Msa0137600 | Msa0524210 | 0.815656 | 8.267152e-52 | -8.615850e-47 |
| Msa0139900 | Msa0524210 | 0.828636 | 8.052539e-55 | -8.615850e-47 |
| Msa0141670 | Msa0524210 | 0.818735 | 1.678364e-52 | -8.615850e-47 |
| Msa0146470 | Msa0524210 | 0.808204 | 3.473628e-50 | -8.615850e-47 |
| Msa0150210 | Msa0524210 | 0.816016 | 6.872939e-52 | -8.615850e-47 |
| Msa0157020 | Msa0524210 | 0.842849 | 2.010982e-58 | -8.615850e-47 |
| Msa0170040 | Msa0524210 | 0.806114 | 9.627117e-50 | -8.615850e-47 |
| Msa0206120 | Msa0524210 | 0.804741 | 1.867306e-49 | -8.615850e-47 |
| Msa0207180 | Msa0524210 | 0.839364 | 1.656616e-57 | -8.615850e-47 |
| Msa0223280 | Msa0524210 | 0.805072 | 1.592651e-49 | -8.615850e-47 |
| Msa0224690 | Msa0524210 | 0.806856 | 6.714294e-50 | -8.615850e-47 |
| Msa0230400 | Msa0524210 | 0.848862 | 4.676273e-60 | -8.615850e-47 |
| Msa0370600 | Msa0524210 | 0.826248 | 3.010321e-54 | -8.615850e-47 |
| Msa0375080 | Msa0524210 | -0.809174 | 2.155412e-50 | -8.615850e-47 |
| Msa0378340 | Msa0524210 | 0.806952 | 6.407617e-50 | -8.615850e-47 |
| Msa0380060 | Msa0524210 | 0.840433 | 8.722134e-58 | -8.615850e-47 |
| Msa0382290 | Msa0524210 | 0.866594 | 2.544623e-65 | -8.615850e-47 |
| Msa0382560 | Msa0524210 | 0.805688 | 1.182825e-49 | -8.615850e-47 |
| Msa0392410 | Msa0524210 | 0.813802 | 2.128199e-51 | -8.615850e-47 |
| Msa0392450 | Msa0524210 | 0.822904 | 1.845108e-53 | -8.615850e-47 |
| Msa0392480 | Msa0524210 | 0.805598 | 1.235732e-49 | -8.615850e-47 |
| Msa0398590 | Msa0524210 | 0.827130 | 1.853944e-54 | -8.615850e-47 |
| Msa0408640 | Msa0524210 | 0.848660 | 5.318401e-60 | -8.615850e-47 |
| Msa0417630 | Msa0524210 | 0.831163 | 1.950860e-55 | -8.615850e-47 |
| Msa0418200 | Msa0524210 | 0.819737 | 9.923255e-53 | -8.615850e-47 |
| Msa0418480 | Msa0524210 | 0.836576 | 8.631637e-57 | -8.615850e-47 |
| Msa0421790 | Msa0524210 | 0.841364 | 4.970087e-58 | -8.615850e-47 |
| Msa0427520 | Msa0524210 | -0.804642 | 1.958600e-49 | -8.615850e-47 |
| Msa0427690 | Msa0524210 | 0.804298 | 2.309720e-49 | -8.615850e-47 |
| Msa0428760 | Msa0524210 | -0.802704 | 4.944507e-49 | -8.615850e-47 |
| Msa0429270 | Msa0524210 | 0.863198 | 2.953232e-64 | -8.615850e-47 |
| Msa0431800 | Msa0524210 | 0.855234 | 7.231774e-62 | -8.615850e-47 |
| Msa0439780 | Msa0524210 | 0.801016 | 1.098251e-48 | -8.615850e-47 |
| Msa0457870 | Msa0524210 | 0.848610 | 5.491715e-60 | -8.615850e-47 |
| Msa0464540 | Msa0524210 | 0.815246 | 1.019753e-51 | -8.615850e-47 |
| Msa0465860 | Msa0524210 | 0.821132 | 4.750129e-53 | -8.615850e-47 |
| Msa0467800 | Msa0524210 | 0.801157 | 1.027835e-48 | -8.615850e-47 |
| Msa0467890 | Msa0524210 | 0.826296 | 2.932917e-54 | -8.615850e-47 |
| Msa0467970 | Msa0524210 | 0.818858 | 1.574128e-52 | -8.615850e-47 |
| Msa0249270 | Msa0524210 | 0.821727 | 3.462624e-53 | -8.615850e-47 |
| Msa0257130 | Msa0524210 | 0.808722 | 2.692841e-50 | -8.615850e-47 |
| Msa0259980 | Msa0524210 | 0.803265 | 3.785619e-49 | -8.615850e-47 |
| Msa0274780 | Msa0524210 | 0.849736 | 2.669482e-60 | -8.615850e-47 |
| Msa0315480 | Msa0524210 | 0.846480 | 2.115492e-59 | -8.615850e-47 |
| Msa0331780 | Msa0524210 | 0.809964 | 1.458114e-50 | -8.615850e-47 |
| Msa0344580 | Msa0524210 | 0.808495 | 3.012002e-50 | -8.615850e-47 |
| Msa0351510 | Msa0524210 | 0.808145 | 3.575564e-50 | -8.615850e-47 |
| Msa0358230 | Msa0524210 | 0.815434 | 9.263607e-52 | -8.615850e-47 |
| Msa0361250 | Msa0524210 | 0.829647 | 4.578553e-55 | -8.615850e-47 |
| Msa0361260 | Msa0524210 | 0.844270 | 8.387811e-59 | -8.615850e-47 |
| Msa0485280 | Msa0524210 | 0.806421 | 8.293889e-50 | -8.615850e-47 |
| Msa0487560 | Msa0524210 | 0.830237 | 3.288656e-55 | -8.615850e-47 |
| Msa0487620 | Msa0524210 | 0.836632 | 8.349733e-57 | -8.615850e-47 |
| Msa0510230 | Msa0524210 | 0.843195 | 1.626588e-58 | -8.615850e-47 |
| Msa0514280 | Msa0524210 | 0.813877 | 2.048821e-51 | -8.615850e-47 |
| Msa0518520 | Msa0524210 | 0.807373 | 5.216683e-50 | -8.615850e-47 |
| Msa0519200 | Msa0524210 | 0.851844 | 6.809032e-61 | -8.615850e-47 |
| Msa0520730 | Msa0524210 | 0.834209 | 3.420180e-56 | -8.615850e-47 |
| Msa0524210 | Msa0526130 | 0.803276 | 3.766357e-49 | -8.615850e-47 |
| Msa0524210 | Msa0528940 | 0.811306 | 7.479265e-51 | -8.615850e-47 |
| Msa0524210 | Msa0532840 | 0.804132 | 2.501399e-49 | -8.615850e-47 |
| Msa0524210 | Msa0533010 | 0.801467 | 8.882721e-49 | -8.615850e-47 |
| Msa0524210 | Msa0537270 | 0.871908 | 4.772210e-67 | -8.615850e-47 |
| Msa0524210 | Msa0538570 | 0.849484 | 3.138936e-60 | -8.615850e-47 |
| Msa0524210 | Msa0543850 | 0.826736 | 2.303671e-54 | -8.615850e-47 |
| Msa0524210 | Msa0547050 | 0.867727 | 1.105508e-65 | -8.615850e-47 |
| Msa0524210 | Msa0567290 | 0.812806 | 3.522898e-51 | -8.615850e-47 |
| Msa0524210 | Msa0593710 | 0.863539 | 2.315765e-64 | -8.615850e-47 |
| Msa0524210 | Msa0594180 | 0.804939 | 1.698267e-49 | -8.615850e-47 |
| Msa0524210 | Msa0594390 | 0.842818 | 2.049664e-58 | -8.615850e-47 |
| Msa0524210 | Msa0599690 | 0.821651 | 3.605500e-53 | -8.615850e-47 |
| Msa0524210 | Msa0600390 | 0.833596 | 4.868748e-56 | -8.615850e-47 |
| Msa0524210 | Msa0601110 | 0.856646 | 2.795272e-62 | -8.615850e-47 |
| Msa0524210 | Msa0601120 | 0.855621 | 5.578684e-62 | -8.615850e-47 |
| Msa0524210 | Msa0601780 | 0.853557 | 2.208342e-61 | -8.615850e-47 |
| Msa0524210 | Msa0607480 | 0.808298 | 3.318302e-50 | -8.615850e-47 |
| Msa0524210 | Msa0614230 | 0.805929 | 1.052876e-49 | -8.615850e-47 |
| Msa0524210 | Msa0619330 | 0.813271 | 2.784979e-51 | -8.615850e-47 |
| Msa0524210 | Msa0621770 | 0.818831 | 1.596522e-52 | -8.615850e-47 |
| Msa0524210 | Msa0633750 | 0.840362 | 9.101009e-58 | -8.615850e-47 |
| Msa0524210 | Msa0634270 | 0.838143 | 3.425628e-57 | -8.615850e-47 |
| Msa0524210 | Msa0638710 | 0.810009 | 1.426352e-50 | -8.615850e-47 |
| Msa0524210 | Msa0640390 | 0.844364 | 7.913042e-59 | -8.615850e-47 |
| Msa0524210 | Msa0640880 | 0.848565 | 5.651044e-60 | -8.615850e-47 |
| Msa0524210 | Msa0641620 | 0.843490 | 1.356679e-58 | -8.615850e-47 |
| Msa0524210 | Msa0642910 | 0.849094 | 4.030583e-60 | -8.615850e-47 |
| Msa0524210 | Msa0656950 | 0.822367 | 2.460592e-53 | -8.615850e-47 |
| Msa0524210 | Msa0665910 | -0.821397 | 4.126160e-53 | -8.615850e-47 |
| Msa0524210 | Msa0667970 | 0.801019 | 1.096770e-48 | -8.615850e-47 |
| Msa0524210 | Msa0678890 | 0.863264 | 2.817312e-64 | -8.615850e-47 |
| Msa0524210 | Msa0681890 | 0.830816 | 2.373580e-55 | -8.615850e-47 |
| Msa0524210 | Msa0691160 | 0.803305 | 3.713707e-49 | -8.615850e-47 |
| Msa0524210 | Msa0700610 | 0.813869 | 2.057675e-51 | -8.615850e-47 |
| Msa0524210 | Msa0700850 | 0.801704 | 7.942224e-49 | -8.615850e-47 |
| Msa0524210 | Msa0700910 | 0.822587 | 2.187359e-53 | -8.615850e-47 |
| Msa0524210 | Msa0703720 | 0.802704 | 4.944803e-49 | -8.615850e-47 |
| Msa0524210 | Msa0703760 | 0.821422 | 4.073071e-53 | -8.615850e-47 |
| Msa0524210 | Msa0709480 | 0.801470 | 8.870464e-49 | -8.615850e-47 |
| Msa0524210 | Msa0716790 | 0.809118 | 2.216020e-50 | -8.615850e-47 |
| Msa0524210 | Msa0720270 | 0.838686 | 2.481689e-57 | -8.615850e-47 |
| Msa0524210 | Msa0722940 | 0.859148 | 5.054854e-63 | -8.615850e-47 |
| Msa0524210 | Msa0723150 | 0.867848 | 1.011074e-65 | -8.615850e-47 |
| Msa0524210 | Msa0730180 | 0.800058 | 1.722297e-48 | -8.615850e-47 |
| Msa0524210 | Msa0738870 | 0.812335 | 4.464876e-51 | -8.615850e-47 |
| Msa0524210 | Msa0738970 | 0.831315 | 1.789479e-55 | -8.615850e-47 |
| Msa0524210 | Msa0799210 | 0.814105 | 1.825032e-51 | -8.615850e-47 |
| Msa0524210 | Msa0802500 | 0.806469 | 8.103604e-50 | -8.615850e-47 |
| Msa0524210 | Msa0803130 | 0.871624 | 5.929783e-67 | -8.615850e-47 |
| Msa0524210 | Msa0804110 | 0.821738 | 3.441695e-53 | -8.615850e-47 |
| Msa0524210 | Msa0819470 | 0.833202 | 6.107675e-56 | -8.615850e-47 |
| Msa0524210 | Msa0841490 | 0.872876 | 2.270887e-67 | -8.615850e-47 |
| Msa0524210 | Msa0843290 | 0.854245 | 1.399416e-61 | -8.615850e-47 |
| Msa0524210 | Msa0859390 | 0.831732 | 1.412613e-55 | -8.615850e-47 |
| Msa0524210 | Msa0877420 | 0.822373 | 2.452804e-53 | -8.615850e-47 |
| Msa0524210 | Msa0886880 | 0.879140 | 1.588688e-69 | -8.615850e-47 |
| Msa0524210 | Msa0930330 | 0.814384 | 1.583437e-51 | -8.615850e-47 |
| Msa0524210 | Msa0931480 | 0.853065 | 3.056895e-61 | -8.615850e-47 |
| Msa0524210 | Msa0951460 | 0.850975 | 1.199124e-60 | -8.615850e-47 |
| Msa0524210 | Msa0951960 | 0.834273 | 3.296551e-56 | -8.615850e-47 |
| Msa0524210 | Msa0955300 | 0.801538 | 8.590598e-49 | -8.615850e-47 |
| Msa0524210 | Msa0958020 | 0.810687 | 1.018584e-50 | -8.615850e-47 |
| Msa0524210 | Msa0974750 | 0.810174 | 1.314192e-50 | -8.615850e-47 |
| Msa0524210 | Msa0988030 | 0.858787 | 6.480602e-63 | -8.615850e-47 |
| Msa0524210 | Msa0990520 | 0.801798 | 7.595606e-49 | -8.615850e-47 |
| Msa0524210 | Msa0992570 | 0.814549 | 1.456231e-51 | -8.615850e-47 |
| Msa0524210 | Msa0992590 | 0.806935 | 6.459552e-50 | -8.615850e-47 |
| Msa0524210 | Msa1002040 | 0.809078 | 2.260589e-50 | -8.615850e-47 |
| Msa0524210 | Msa1004500 | 0.827069 | 1.917344e-54 | -8.615850e-47 |
| Msa0524210 | Msa1004520 | 0.816231 | 6.152781e-52 | -8.615850e-47 |
| Msa0524210 | Msa1009670 | 0.811874 | 5.628333e-51 | -8.615850e-47 |
| Msa0524210 | Msa1009790 | 0.803214 | 3.878237e-49 | -8.615850e-47 |
| Msa0524210 | Msa1014270 | 0.815661 | 8.244974e-52 | -8.615850e-47 |
| Msa0524210 | Msa1022310 | 0.816183 | 6.307248e-52 | -8.615850e-47 |
| Msa0524210 | Msa1022650 | 0.807777 | 4.282916e-50 | -8.615850e-47 |
| Msa0524210 | Msa1027790 | 0.837101 | 6.339723e-57 | -8.615850e-47 |
| Msa0524210 | Msa1028460 | 0.802719 | 4.908499e-49 | -8.615850e-47 |
| Msa0524210 | Msa1046870 | 0.823604 | 1.266429e-53 | -8.615850e-47 |
| Msa0524210 | Msa1061180 | 0.816227 | 6.165671e-52 | -8.615850e-47 |
| Msa0524210 | Msa1097850 | 0.802744 | 4.851051e-49 | -8.615850e-47 |
| Msa0524210 | Msa1106560 | 0.826609 | 2.469914e-54 | -8.615850e-47 |
| Msa0524210 | Msa1106580 | 0.815796 | 7.693023e-52 | -8.615850e-47 |
| Msa0524210 | Msa1106810 | 0.804458 | 2.139883e-49 | -8.615850e-47 |
| Msa0524210 | Msa1112610 | 0.840946 | 6.400991e-58 | -8.615850e-47 |
| Msa0524210 | Msa1130690 | 0.811737 | 6.028984e-51 | -8.615850e-47 |
| Msa0524210 | Msa1131020 | 0.808515 | 2.982662e-50 | -8.615850e-47 |
| Msa0524210 | Msa1134400 | 0.808100 | 3.656020e-50 | -8.615850e-47 |
| Msa0524210 | Msa1166180 | 0.802882 | 4.542944e-49 | -8.615850e-47 |
| Msa0524210 | Msa1171340 | 0.802205 | 6.264263e-49 | -8.615850e-47 |
| Msa0524210 | Msa1183390 | 0.809447 | 1.883609e-50 | -8.615850e-47 |
| Msa0524210 | Msa1197110 | 0.805688 | 1.182879e-49 | -8.615850e-47 |
| Msa0524210 | Msa1200920 | 0.840585 | 7.958949e-58 | -8.615850e-47 |
| Msa0524210 | Msa1208510 | 0.828510 | 8.636355e-55 | -8.615850e-47 |
| Msa0524210 | Msa1214730 | 0.818501 | 1.896286e-52 | -8.615850e-47 |
| Msa0524210 | Msa1214870 | 0.830471 | 2.882122e-55 | -8.615850e-47 |
| Msa0524210 | Msa1215210 | 0.811601 | 6.454070e-51 | -8.615850e-47 |
| Msa0524210 | Msa1219250 | 0.823769 | 1.159100e-53 | -8.615850e-47 |
| Msa0524210 | Msa1232860 | 0.837158 | 6.132095e-57 | -8.615850e-47 |
| Msa0524210 | Msa1237930 | 0.820695 | 5.986448e-53 | -8.615850e-47 |
| Msa0524210 | Msa1241680 | 0.807582 | 4.710887e-50 | -8.615850e-47 |
| Msa0524210 | Msa1258810 | 0.871672 | 5.718573e-67 | -8.615850e-47 |
| Msa0524210 | Msa1271510 | 0.811740 | 6.018908e-51 | -8.615850e-47 |
| Msa0524210 | Msa1274740 | 0.813422 | 2.580933e-51 | -8.615850e-47 |
| Msa0524210 | Msa1275290 | 0.821432 | 4.051140e-53 | -8.615850e-47 |
| Msa0524210 | Msa1293530 | 0.805628 | 1.218046e-49 | -8.615850e-47 |
| Msa0524210 | Msa1302150 | 0.815195 | 1.046832e-51 | -8.615850e-47 |
| Msa0524210 | Msa1307370 | 0.801567 | 8.470224e-49 | -8.615850e-47 |
| Msa0524210 | Msa1308950 | 0.806710 | 7.208091e-50 | -8.615850e-47 |
| Msa0524210 | Msa1312730 | 0.815676 | 8.184064e-52 | -8.615850e-47 |
| Msa0524210 | Msa1313460 | 0.829662 | 4.539935e-55 | -8.615850e-47 |
| Msa0524210 | Msa1315980 | 0.801314 | 9.543969e-49 | -8.615850e-47 |
| Msa0524210 | Msa1330240 | 0.848259 | 6.868048e-60 | -8.615850e-47 |
| Msa0524210 | Msa1350670 | 0.834981 | 2.188890e-56 | -8.615850e-47 |
| Msa0524210 | Msa1354040 | 0.809624 | 1.725770e-50 | -8.615850e-47 |
| Msa0524210 | Msa1355400 | 0.825913 | 3.615943e-54 | -8.615850e-47 |
| Msa0524210 | Msa1365020 | 0.911129 | 8.620525e-83 | -8.615850e-47 |
| Msa0524210 | Msa1367410 | 0.976624 | 3.500080e-142 | -8.615850e-47 |
| Msa0524210 | Msa1367810 | 0.807078 | 6.025635e-50 | -8.615850e-47 |
| Msa0524210 | Msa1369860 | 0.820383 | 7.062696e-53 | -8.615850e-47 |
| Msa0524210 | Msa1376530 | 0.806506 | 7.960065e-50 | -8.615850e-47 |
| Msa0524210 | Msa1382720 | 0.812444 | 4.226868e-51 | -8.615850e-47 |
| Msa0524210 | Msa1405770 | 0.820294 | 7.402868e-53 | -8.615850e-47 |
| Msa0524210 | Msa1407710 | 0.801243 | 9.873256e-49 | -8.615850e-47 |
| Msa0524210 | Msa1417650 | 0.987426 | 3.239568e-170 | -8.615850e-47 |
| Msa0524210 | Msa1421810 | 0.838541 | 2.705367e-57 | -8.615850e-47 |
| Msa0524210 | Msa1425060 | 0.828691 | 7.809015e-55 | -8.615850e-47 |
| Msa0524210 | Msa1434020 | 0.860997 | 1.397431e-63 | -8.615850e-47 |
| Msa0524210 | Msa1435040 | 0.822045 | 2.922340e-53 | -8.615850e-47 |
| Msa0524210 | Msa1435050 | 0.861243 | 1.176688e-63 | -8.615850e-47 |
| Msa0524210 | Msa1435670 | 0.804029 | 2.628276e-49 | -8.615850e-47 |
| Msa0524210 | Msa1437150 | 0.832863 | 7.415686e-56 | -8.615850e-47 |
| Msa0524210 | Msa1439670 | 0.861253 | 1.168387e-63 | -8.615850e-47 |
| Msa0524210 | Msa1439680 | 0.867378 | 1.430201e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524210 | MtrunA17_Chr3g0145511 | 91.667 | 312 | 12 | 2 | 1 | 312 | 1 | 298 | 0.0 | 558 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524210 | AT2G16630.1 | 46.348 | 356 | 136 | 6 | 7 | 312 | 9 | 359 | 1.47e-100 | 300 |
Find 99 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGATCTCCTCTCCCTTTC+AGG | 0.175349 | 3_4:-77723559 | None:intergenic |
| GGTGCCAATGTTGGTGGTGG+TGG | 0.190043 | 3_4:-77722594 | None:intergenic |
| ATGGTGGAAGTTGTGGCATT+GGG | 0.241279 | 3_4:-77722653 | None:intergenic |
| ATTGTGTATGATTATGAAAA+TGG | 0.243716 | 3_4:-77723988 | None:intergenic |
| ATCTTTCTAGCATGTATGTT+TGG | 0.263370 | 3_4:-77723894 | None:intergenic |
| GATGGACATGCTGAAGCTTC+TGG | 0.264920 | 3_4:-77722693 | None:intergenic |
| AATGTTGGTGGTGGTGGGGA+TGG | 0.300659 | 3_4:-77722588 | None:intergenic |
| ACAAAAGTAGCTGTAGCTTT+TGG | 0.304044 | 3_4:+77723488 | Msa0524210:CDS |
| CATTTCATGAGGGCTAATTC+TGG | 0.314423 | 3_4:+77723725 | Msa0524210:CDS |
| AAGGGAGAGGAGATCCTTAC+AGG | 0.324413 | 3_4:+77723564 | Msa0524210:CDS |
| TTCTCATTGCATTTGCCAAC+TGG | 0.329560 | 3_4:+77720846 | Msa0524210:five_prime_UTR |
| ACACATGAATTATGCTTTGA+TGG | 0.330439 | 3_4:+77723670 | Msa0524210:CDS |
| CAAGAGAAGAAACAACAAAT+TGG | 0.341479 | 3_4:+77722334 | Msa0524210:CDS |
| GTGCCAATGTTGGTGGTGGT+GGG | 0.345243 | 3_4:-77722593 | None:intergenic |
| CTCCAATAGCATTCATATTC+CGG | 0.351920 | 3_4:-77723449 | None:intergenic |
| AAAATCCAAGACTCATGTTT+AGG | 0.352973 | 3_4:+77722481 | Msa0524210:CDS |
| TCTAACATTCATGGAGTTGC+CGG | 0.354500 | 3_4:+77720875 | Msa0524210:exon |
| TCTTTCTAGCATGTATGTTT+GGG | 0.358984 | 3_4:-77723893 | None:intergenic |
| ATTCTTTCAGTGGCCATTGA+TGG | 0.372198 | 3_4:+77720924 | Msa0524210:CDS |
| ATGTTGGTGGTGGTGGGGAT+GGG | 0.374966 | 3_4:-77722587 | None:intergenic |
| GAAGAAACAACAAATTGGTT+TGG | 0.375618 | 3_4:+77722339 | Msa0524210:CDS |
| TTGGCAAATGCAATGAGAAA+TGG | 0.378536 | 3_4:-77720842 | None:intergenic |
| TGGACTTCTTCTAACATTCA+TGG | 0.382090 | 3_4:+77720866 | Msa0524210:exon |
| CAAGTGGATGGTAAGAGAAT+TGG | 0.385574 | 3_4:-77723637 | None:intergenic |
| AATGGTGGAAGTTGTGGCAT+TGG | 0.390842 | 3_4:-77722654 | None:intergenic |
| AGTTAGATCTCACCATTAAC+AGG | 0.396284 | 3_4:-77721026 | None:intergenic |
| TGCCGGAATATGAATGCTAT+TGG | 0.408426 | 3_4:+77723447 | Msa0524210:CDS |
| ATCTGCCTTTGTTCCATCAA+TGG | 0.412809 | 3_4:-77720937 | None:intergenic |
| CATGTCTCGGGAAATAATAA+TGG | 0.419703 | 3_4:+77722414 | Msa0524210:CDS |
| TTCCCAAACATACTAGGAAA+AGG | 0.428916 | 3_4:-77723811 | None:intergenic |
| ATGGTTGCAGCAAGGAAATA+TGG | 0.433099 | 3_4:+77723512 | Msa0524210:CDS |
| AGCTATACAATGAGGTTTGA+TGG | 0.433754 | 3_4:+77722363 | Msa0524210:CDS |
| TGGTGGTGGTGGGGATGGGT+TGG | 0.440191 | 3_4:-77722583 | None:intergenic |
| ATGTGGAGGAGGAGAAGAAA+TGG | 0.446281 | 3_4:-77722619 | None:intergenic |
| TTGTGTATGATTATGAAAAT+GGG | 0.452251 | 3_4:-77723987 | None:intergenic |
| TGGCAAATGCAATGAGAAAT+GGG | 0.458534 | 3_4:-77720841 | None:intergenic |
| AATCATTTCCCAAACATACT+AGG | 0.462481 | 3_4:-77723817 | None:intergenic |
| TGCCAATGTTGGTGGTGGTG+GGG | 0.465868 | 3_4:-77722592 | None:intergenic |
| TGGTTGTTCTGCACATGTCT+CGG | 0.469204 | 3_4:+77722401 | Msa0524210:CDS |
| TTTGATGGAGCACCAGACTT+AGG | 0.482264 | 3_4:+77722378 | Msa0524210:CDS |
| ATGAGGGCTAATTCTGGTGC+TGG | 0.483178 | 3_4:+77723731 | Msa0524210:CDS |
| TGCTTTGATGGGCTCAACTA+GGG | 0.485464 | 3_4:+77723682 | Msa0524210:CDS |
| CAGTATTGCATAGGTTGAGC+AGG | 0.486574 | 3_4:-77722549 | None:intergenic |
| AACATCCTAAACATGAGTCT+TGG | 0.489630 | 3_4:-77722486 | None:intergenic |
| GGTTGTTCTGCACATGTCTC+GGG | 0.491091 | 3_4:+77722402 | Msa0524210:CDS |
| TGGTGGAAGTTGTGGCATTG+GGG | 0.492351 | 3_4:-77722652 | None:intergenic |
| CACATGAATTATGCTTTGAT+GGG | 0.492608 | 3_4:+77723671 | Msa0524210:CDS |
| GGTGGTGCCAATGTTGGTGG+TGG | 0.493754 | 3_4:-77722597 | None:intergenic |
| TGTGGAGGAGGAGAAGAAAT+GGG | 0.494289 | 3_4:-77722618 | None:intergenic |
| ATGCTTTGATGGGCTCAACT+AGG | 0.495913 | 3_4:+77723681 | Msa0524210:CDS |
| GTTGCAAACAAAAGCTTCTC+CGG | 0.497432 | 3_4:-77720894 | None:intergenic |
| ATCCCCACCACCACCAACAT+TGG | 0.499035 | 3_4:+77722590 | Msa0524210:CDS |
| GCACCTTCACCACAACTCAT+TGG | 0.503873 | 3_4:-77722447 | None:intergenic |
| TCCCAAACATACTAGGAAAA+GGG | 0.512255 | 3_4:-77723810 | None:intergenic |
| TGTCATGTAGTGACAACAAT+GGG | 0.513625 | 3_4:+77722298 | Msa0524210:CDS |
| CATGTTTAGGATGTTTGACA+TGG | 0.532543 | 3_4:+77722494 | Msa0524210:CDS |
| TCTCTCAAAAGAGTCCTGTA+AGG | 0.534067 | 3_4:-77723578 | None:intergenic |
| GCAGAACAACCACCTAAGTC+TGG | 0.541167 | 3_4:-77722390 | None:intergenic |
| CAATTCTCTTACCATCCACT+TGG | 0.543024 | 3_4:+77723638 | Msa0524210:CDS |
| CGGAATATGAATGCTATTGG+AGG | 0.544236 | 3_4:+77723450 | Msa0524210:CDS |
| CAGTGATAAACTTACTGTGA+TGG | 0.555843 | 3_4:-77722711 | None:intergenic |
| TTACTGCTTATCATTTCATG+AGG | 0.557628 | 3_4:+77723714 | Msa0524210:CDS |
| TAGGTTGAGCAGGCTGAGCA+AGG | 0.559848 | 3_4:-77722539 | None:intergenic |
| ATGAGTTGTGGTGAAGGTGC+TGG | 0.561315 | 3_4:+77722450 | Msa0524210:CDS |
| TGATAGGAAGTGGACAATGC+CGG | 0.564202 | 3_4:+77723430 | Msa0524210:intron |
| ATGGGTGGTGCCAATGTTGG+TGG | 0.567999 | 3_4:-77722600 | None:intergenic |
| GATGTTGAGCAGTATTGCAT+AGG | 0.569435 | 3_4:-77722558 | None:intergenic |
| AAAATCATTGGTGGTAATGG+TGG | 0.570401 | 3_4:-77722669 | None:intergenic |
| GGTGGAAGTTGTGGCATTGG+GGG | 0.571199 | 3_4:-77722651 | None:intergenic |
| TTTGTGATCAATGCAAAGAC+GGG | 0.581900 | 3_4:+77720982 | Msa0524210:CDS |
| GGTAGGTTGAAATGTGGAGG+AGG | 0.582342 | 3_4:-77722630 | None:intergenic |
| GGTGGTAATGGTGGAAGTTG+TGG | 0.582776 | 3_4:-77722660 | None:intergenic |
| ACATTGTGGTATGGCCTGAA+AGG | 0.589527 | 3_4:+77723545 | Msa0524210:CDS |
| TGGTATGGCCTGAAAGGGAG+AGG | 0.589868 | 3_4:+77723551 | Msa0524210:CDS |
| TACTGCTTATCATTTCATGA+GGG | 0.598834 | 3_4:+77723715 | Msa0524210:CDS |
| ATTTGTGATCAATGCAAAGA+CGG | 0.604556 | 3_4:+77720981 | Msa0524210:CDS |
| TGAGCAGGCTGAGCAAGGAG+TGG | 0.605851 | 3_4:-77722534 | None:intergenic |
| GAAATGGGTGGTGCCAATGT+TGG | 0.606306 | 3_4:-77722603 | None:intergenic |
| AATGTTAGAAGAAGTCCAGT+TGG | 0.611637 | 3_4:-77720861 | None:intergenic |
| GATGGAGCACCAGACTTAGG+TGG | 0.611734 | 3_4:+77722381 | Msa0524210:CDS |
| CATTGTGGTATGGCCTGAAA+GGG | 0.612379 | 3_4:+77723546 | Msa0524210:CDS |
| GGACCAATGAGTTGTGGTGA+AGG | 0.613433 | 3_4:+77722444 | Msa0524210:CDS |
| AGTGGCCATTGATGGAACAA+AGG | 0.622178 | 3_4:+77720932 | Msa0524210:CDS |
| GGTTTGGAAGCTATACAATG+AGG | 0.622859 | 3_4:+77722355 | Msa0524210:CDS |
| GAATATGAATGCTATTGGAG+GGG | 0.629266 | 3_4:+77723452 | Msa0524210:CDS |
| GGAAATAATAATGGACAAGG+AGG | 0.636968 | 3_4:+77722423 | Msa0524210:CDS |
| CTGTCATGTAGTGACAACAA+TGG | 0.641151 | 3_4:+77722297 | Msa0524210:CDS |
| TCGGGAAATAATAATGGACA+AGG | 0.644592 | 3_4:+77722420 | Msa0524210:CDS |
| AAGGCAGATACTATGCTCAC+CGG | 0.644788 | 3_4:+77720951 | Msa0524210:CDS |
| TTGATCACAAATGACAGTGC+CGG | 0.647531 | 3_4:-77720970 | None:intergenic |
| ACAGACATGACATTGTGGTA+TGG | 0.658654 | 3_4:+77723536 | Msa0524210:CDS |
| GGAATATGAATGCTATTGGA+GGG | 0.672296 | 3_4:+77723451 | Msa0524210:CDS |
| CAAGGAGGACCAATGAGTTG+TGG | 0.682632 | 3_4:+77722438 | Msa0524210:CDS |
| ATGTGTGTGACTACACCAAG+TGG | 0.706120 | 3_4:-77723653 | None:intergenic |
| GGAGGAGGAGAAGAAATGGG+TGG | 0.708291 | 3_4:-77722615 | None:intergenic |
| GTGTGACTACACCAAGTGGA+TGG | 0.711817 | 3_4:-77723649 | None:intergenic |
| TGACATGGAGATGTATGCTG+TGG | 0.712430 | 3_4:+77722509 | Msa0524210:CDS |
| TGAAATGATAAGCAGTAACG+AGG | 0.716584 | 3_4:-77723709 | None:intergenic |
| ATGGTACAGACATGACATTG+TGG | 0.735250 | 3_4:+77723531 | Msa0524210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAATAAATACAATTAATT+TGG | + | chr3_4:77722194-77722213 | Msa0524210:intron | 10.0% |
| !! | TCTTTAAACTTATTATTATT+TGG | - | chr3_4:77723095-77723114 | None:intergenic | 10.0% |
| !!! | TATTTTCAACTAATTTTTTT+TGG | - | chr3_4:77723152-77723171 | None:intergenic | 10.0% |
| !! | TTGTAAATTATTATTATAAC+CGG | + | chr3_4:77723336-77723355 | Msa0524210:intron | 10.0% |
| !!! | CTTTTAGTTTTTTTTCTTTT+TGG | - | chr3_4:77721337-77721356 | None:intergenic | 15.0% |
| !! | TTTCAAATAAAAACTCATAA+TGG | - | chr3_4:77721583-77721602 | None:intergenic | 15.0% |
| !!! | TATGAGTTTTTATTTGAAAT+AGG | + | chr3_4:77721584-77721603 | Msa0524210:intron | 15.0% |
| !!! | AAGGTTTTTTTTTTCTTTTA+CGG | - | chr3_4:77721992-77722011 | None:intergenic | 15.0% |
| !! | TGAAATCTTATTATCATTAA+TGG | - | chr3_4:77722753-77722772 | None:intergenic | 15.0% |
| !! | TGTAAAATTACTAAAAGAAA+TGG | + | chr3_4:77722880-77722899 | Msa0524210:intron | 15.0% |
| !!! | TACTCAAAAAATGTATTTTT+AGG | - | chr3_4:77723070-77723089 | None:intergenic | 15.0% |
| !! | AATAATAAGTTTAAAGACTT+TGG | + | chr3_4:77723098-77723117 | Msa0524210:intron | 15.0% |
| !!! | AACATTTTTAATTCTTTCAG+TGG | + | chr3_4:77720914-77720933 | Msa0524210:CDS | 20.0% |
| !!! | AAATGGTTATTATGTGTTTT+TGG | - | chr3_4:77721138-77721157 | None:intergenic | 20.0% |
| !!! | ACAATTTAGTTTTTTCAATG+CGG | + | chr3_4:77721479-77721498 | Msa0524210:intron | 20.0% |
| !!! | AATGTTAACCTGTATTTTTA+AGG | + | chr3_4:77721609-77721628 | Msa0524210:intron | 20.0% |
| !! | TTAAATGCACAAAATTTAAG+AGG | + | chr3_4:77721705-77721724 | Msa0524210:intron | 20.0% |
| !!! | TAAGAGGATGTTTTTATTTT+TGG | + | chr3_4:77721721-77721740 | Msa0524210:intron | 20.0% |
| !!! | AAGAGGATGTTTTTATTTTT+GGG | + | chr3_4:77721722-77721741 | Msa0524210:intron | 20.0% |
| !! | AAATAAGCAAAATAAGCATT+GGG | + | chr3_4:77721790-77721809 | Msa0524210:intron | 20.0% |
| !!! | ATATGTTTTTAATTGTGACA+TGG | + | chr3_4:77721822-77721841 | Msa0524210:intron | 20.0% |
| !!! | AAATTGTACTATTTGTTAAG+TGG | - | chr3_4:77721859-77721878 | None:intergenic | 20.0% |
| !! | TCAGTTCTATATTAGTAATT+AGG | + | chr3_4:77721891-77721910 | Msa0524210:intron | 20.0% |
| !!! | GTTTTGAAAATAGTAGAATA+TGG | + | chr3_4:77722981-77723000 | Msa0524210:intron | 20.0% |
| !!! | GGTAAAAATTTGAGTTTAAA+AGG | + | chr3_4:77723119-77723138 | Msa0524210:intron | 20.0% |
| !! | ATGAAAGATGAATAAATATC+CGG | - | chr3_4:77723358-77723377 | None:intergenic | 20.0% |
| !!! | TGTAAAGTATTTGATTTGAT+AGG | + | chr3_4:77723414-77723433 | Msa0524210:intron | 20.0% |
| ! | AAATGTATGGTACTAATAGA+TGG | - | chr3_4:77721103-77721122 | None:intergenic | 25.0% |
| ! | GAACGTTTAACTAAAATGTA+TGG | - | chr3_4:77721116-77721135 | None:intergenic | 25.0% |
| ! | TGAGTTTATGAACTATCTTA+CGG | - | chr3_4:77721420-77721439 | None:intergenic | 25.0% |
| !! | TAATGGTTCCATTTAGTTTA+TGG | + | chr3_4:77721514-77721533 | Msa0524210:intron | 25.0% |
| ! | TTTCCTTTCCATAAACTAAA+TGG | - | chr3_4:77721525-77721544 | None:intergenic | 25.0% |
| ! | GAAATAAGCAAAATAAGCAT+TGG | + | chr3_4:77721789-77721808 | Msa0524210:intron | 25.0% |
| !!! | ACTAATATAGAACTGACTTT+TGG | - | chr3_4:77721887-77721906 | None:intergenic | 25.0% |
| ! | GTCAATAAAATCTATGACAT+AGG | - | chr3_4:77722249-77722268 | None:intergenic | 25.0% |
| ! | TTATTGACCAAATTTAATGC+AGG | + | chr3_4:77722261-77722280 | Msa0524210:intron | 25.0% |
| !! | ATACTATTTTCACTAAGAGT+CGG | + | chr3_4:77722787-77722806 | Msa0524210:intron | 25.0% |
| !! | AAATTTGAGTTTAAAAGGCT+AGG | + | chr3_4:77723124-77723143 | Msa0524210:intron | 25.0% |
| ATTTGTGATCAATGCAAAGA+CGG | + | chr3_4:77720981-77721000 | Msa0524210:CDS | 30.0% | |
| ! | CTTTTCGATTATCCTGTTAA+TGG | + | chr3_4:77721014-77721033 | Msa0524210:CDS | 30.0% |
| ATGCAGGAGAAAAACTAAAA+TGG | - | chr3_4:77721155-77721174 | None:intergenic | 30.0% | |
| ACTATGATAGAGGTTCAATT+TGG | - | chr3_4:77721230-77721249 | None:intergenic | 30.0% | |
| ATTGAACCTCTATCATAGTT+TGG | + | chr3_4:77721231-77721250 | Msa0524210:intron | 30.0% | |
| CAAATGGCAAGAACTATTAA+CGG | - | chr3_4:77721277-77721296 | None:intergenic | 30.0% | |
| GAGTTTATGAACTATCTTAC+GGG | - | chr3_4:77721419-77721438 | None:intergenic | 30.0% | |
| !!! | TGCGGTTCATTTTGATTTAA+TGG | + | chr3_4:77721497-77721516 | Msa0524210:intron | 30.0% |
| ! | GTTCCATTTAGTTTATGGAA+AGG | + | chr3_4:77721519-77721538 | Msa0524210:intron | 30.0% |
| AACTTGTGCCTTAAAAATAC+AGG | - | chr3_4:77721620-77721639 | None:intergenic | 30.0% | |
| TCAAAAAGAAGTTCAACAGT+TGG | + | chr3_4:77721942-77721961 | Msa0524210:intron | 30.0% | |
| ATACACAACAACAACAACAA+AGG | - | chr3_4:77722011-77722030 | None:intergenic | 30.0% | |
| TTTCAGCTAAGACAAAACAA+AGG | - | chr3_4:77722131-77722150 | None:intergenic | 30.0% | |
| ! | AATTTTTCATTGCCTCTAGT+TGG | + | chr3_4:77722149-77722168 | Msa0524210:intron | 30.0% |
| ! | ATTTTTCATTGCCTCTAGTT+GGG | + | chr3_4:77722150-77722169 | Msa0524210:intron | 30.0% |
| ! | TTTTGCACCTGCATTAAATT+TGG | - | chr3_4:77722271-77722290 | None:intergenic | 30.0% |
| CAAGAGAAGAAACAACAAAT+TGG | + | chr3_4:77722334-77722353 | Msa0524210:CDS | 30.0% | |
| GAAGAAACAACAAATTGGTT+TGG | + | chr3_4:77722339-77722358 | Msa0524210:CDS | 30.0% | |
| AAAATCCAAGACTCATGTTT+AGG | + | chr3_4:77722481-77722500 | Msa0524210:CDS | 30.0% | |
| TAGTAGAATATGGTGATCTA+TGG | + | chr3_4:77722991-77723010 | Msa0524210:intron | 30.0% | |
| AGTAGAATATGGTGATCTAT+GGG | + | chr3_4:77722992-77723011 | Msa0524210:intron | 30.0% | |
| AAAAAAGTCTAACACTGTTC+AGG | + | chr3_4:77723203-77723222 | Msa0524210:intron | 30.0% | |
| !! | GTATTTGATTTGATAGGAAG+TGG | + | chr3_4:77723420-77723439 | Msa0524210:intron | 30.0% |
| ACACATGAATTATGCTTTGA+TGG | + | chr3_4:77723670-77723689 | Msa0524210:CDS | 30.0% | |
| CACATGAATTATGCTTTGAT+GGG | + | chr3_4:77723671-77723690 | Msa0524210:CDS | 30.0% | |
| TTACTGCTTATCATTTCATG+AGG | + | chr3_4:77723714-77723733 | Msa0524210:CDS | 30.0% | |
| TACTGCTTATCATTTCATGA+GGG | + | chr3_4:77723715-77723734 | Msa0524210:CDS | 30.0% | |
| AATCATTTCCCAAACATACT+AGG | - | chr3_4:77723820-77723839 | None:intergenic | 30.0% | |
| ! | TCTTTCTAGCATGTATGTTT+GGG | - | chr3_4:77723896-77723915 | None:intergenic | 30.0% |
| ! | ATCTTTCTAGCATGTATGTT+TGG | - | chr3_4:77723897-77723916 | None:intergenic | 30.0% |
| TGGCAAATGCAATGAGAAAT+GGG | - | chr3_4:77720844-77720863 | None:intergenic | 35.0% | |
| TTGGCAAATGCAATGAGAAA+TGG | - | chr3_4:77720845-77720864 | None:intergenic | 35.0% | |
| AATGTTAGAAGAAGTCCAGT+TGG | - | chr3_4:77720864-77720883 | None:intergenic | 35.0% | |
| TGGACTTCTTCTAACATTCA+TGG | + | chr3_4:77720866-77720885 | Msa0524210:exon | 35.0% | |
| TTTGTGATCAATGCAAAGAC+GGG | + | chr3_4:77720982-77721001 | Msa0524210:CDS | 35.0% | |
| AGTTAGATCTCACCATTAAC+AGG | - | chr3_4:77721029-77721048 | None:intergenic | 35.0% | |
| ! | TTTCTCCTGCATTGATAGAT+AGG | + | chr3_4:77721163-77721182 | Msa0524210:intron | 35.0% |
| GATAGGACTGTAACTGTTTA+TGG | + | chr3_4:77721180-77721199 | Msa0524210:intron | 35.0% | |
| GACTGTAACTGTTTATGGTT+TGG | + | chr3_4:77721185-77721204 | Msa0524210:intron | 35.0% | |
| GATAGAGGTTCAATTTGGTT+CGG | - | chr3_4:77721225-77721244 | None:intergenic | 35.0% | |
| ACCTCTATCATAGTTTGGTA+TGG | + | chr3_4:77721236-77721255 | Msa0524210:intron | 35.0% | |
| ACCATACCAAACTATGATAG+AGG | - | chr3_4:77721240-77721259 | None:intergenic | 35.0% | |
| TGGAAAGGAAACATGAAAAG+TGG | + | chr3_4:77721534-77721553 | Msa0524210:intron | 35.0% | |
| GGAAAGGAAACATGAAAAGT+GGG | + | chr3_4:77721535-77721554 | Msa0524210:intron | 35.0% | |
| TTGCTTAACATGTGCCTTTA+GGG | + | chr3_4:77721745-77721764 | Msa0524210:intron | 35.0% | |
| TATGCTAACTTATGCCCTAA+AGG | - | chr3_4:77721762-77721781 | None:intergenic | 35.0% | |
| !! | TAAGCAAAATAAGCATTGGG+TGG | + | chr3_4:77721793-77721812 | Msa0524210:intron | 35.0% |
| !!! | TAGACTAATACTTTTTCGCC+TGG | + | chr3_4:77722038-77722057 | Msa0524210:intron | 35.0% |
| TCACATGTTGTGACTTTGTA+AGG | + | chr3_4:77722061-77722080 | Msa0524210:intron | 35.0% | |
| TGTCATGTAGTGACAACAAT+GGG | + | chr3_4:77722298-77722317 | Msa0524210:CDS | 35.0% | |
| AGCTATACAATGAGGTTTGA+TGG | + | chr3_4:77722363-77722382 | Msa0524210:CDS | 35.0% | |
| CATGTCTCGGGAAATAATAA+TGG | + | chr3_4:77722414-77722433 | Msa0524210:CDS | 35.0% | |
| !! | TCGGGAAATAATAATGGACA+AGG | + | chr3_4:77722420-77722439 | Msa0524210:CDS | 35.0% |
| !! | GGAAATAATAATGGACAAGG+AGG | + | chr3_4:77722423-77722442 | Msa0524210:CDS | 35.0% |
| AACATCCTAAACATGAGTCT+TGG | - | chr3_4:77722489-77722508 | None:intergenic | 35.0% | |
| ! | CATGTTTAGGATGTTTGACA+TGG | + | chr3_4:77722494-77722513 | Msa0524210:CDS | 35.0% |
| !! | AAAATCATTGGTGGTAATGG+TGG | - | chr3_4:77722672-77722691 | None:intergenic | 35.0% |
| ! | GGAAAAATCATTGGTGGTAA+TGG | - | chr3_4:77722675-77722694 | None:intergenic | 35.0% |
| ! | GAAGCTTCTGGAAAAATCAT+TGG | - | chr3_4:77722684-77722703 | None:intergenic | 35.0% |
| CAGTGATAAACTTACTGTGA+TGG | - | chr3_4:77722714-77722733 | None:intergenic | 35.0% | |
| CTCCAATAGCATTCATATTC+CGG | - | chr3_4:77723452-77723471 | None:intergenic | 35.0% | |
| GGAATATGAATGCTATTGGA+GGG | + | chr3_4:77723451-77723470 | Msa0524210:CDS | 35.0% | |
| GAATATGAATGCTATTGGAG+GGG | + | chr3_4:77723452-77723471 | Msa0524210:CDS | 35.0% | |
| ! | ACAAAAGTAGCTGTAGCTTT+TGG | + | chr3_4:77723488-77723507 | Msa0524210:CDS | 35.0% |
| TGAAATGATAAGCAGTAACG+AGG | - | chr3_4:77723712-77723731 | None:intergenic | 35.0% | |
| ! | TACCCTTTTCCTAGTATGTT+TGG | + | chr3_4:77723808-77723827 | Msa0524210:three_prime_UTR | 35.0% |
| ! | ACCCTTTTCCTAGTATGTTT+GGG | + | chr3_4:77723809-77723828 | Msa0524210:three_prime_UTR | 35.0% |
| TCCCAAACATACTAGGAAAA+GGG | - | chr3_4:77723813-77723832 | None:intergenic | 35.0% | |
| TTCCCAAACATACTAGGAAA+AGG | - | chr3_4:77723814-77723833 | None:intergenic | 35.0% | |
| TTCTCATTGCATTTGCCAAC+TGG | + | chr3_4:77720846-77720865 | Msa0524210:five_prime_UTR | 40.0% | |
| TCTAACATTCATGGAGTTGC+CGG | + | chr3_4:77720875-77720894 | Msa0524210:exon | 40.0% | |
| GTTGCAAACAAAAGCTTCTC+CGG | - | chr3_4:77720897-77720916 | None:intergenic | 40.0% | |
| ATTCTTTCAGTGGCCATTGA+TGG | + | chr3_4:77720924-77720943 | Msa0524210:CDS | 40.0% | |
| ATCTGCCTTTGTTCCATCAA+TGG | - | chr3_4:77720940-77720959 | None:intergenic | 40.0% | |
| TTGATCACAAATGACAGTGC+CGG | - | chr3_4:77720973-77720992 | None:intergenic | 40.0% | |
| ACAGTCCTATCTATCAATGC+AGG | - | chr3_4:77721171-77721190 | None:intergenic | 40.0% | |
| ! | AACTGTTTATGGTTTGGCTC+AGG | + | chr3_4:77721191-77721210 | Msa0524210:intron | 40.0% |
| ! | ACTGTTTATGGTTTGGCTCA+GGG | + | chr3_4:77721192-77721211 | Msa0524210:intron | 40.0% |
| ACAAAACTCTTGCGATTGAC+CGG | - | chr3_4:77721305-77721324 | None:intergenic | 40.0% | |
| GTTCATAAACTCAACCAACC+TGG | + | chr3_4:77721427-77721446 | Msa0524210:intron | 40.0% | |
| GGAAACATGAAAAGTGGGAA+AGG | + | chr3_4:77721540-77721559 | Msa0524210:intron | 40.0% | |
| GTTGCTTAACATGTGCCTTT+AGG | + | chr3_4:77721744-77721763 | Msa0524210:intron | 40.0% | |
| ACCCTAACTAAAACAGGAGA+GGG | - | chr3_4:77722106-77722125 | None:intergenic | 40.0% | |
| CTGTCATGTAGTGACAACAA+TGG | + | chr3_4:77722297-77722316 | Msa0524210:CDS | 40.0% | |
| GGTTTGGAAGCTATACAATG+AGG | + | chr3_4:77722355-77722374 | Msa0524210:CDS | 40.0% | |
| ! | ATGAGTCTTGGATTTTGAGC+AGG | - | chr3_4:77722477-77722496 | None:intergenic | 40.0% |
| GATGTTGAGCAGTATTGCAT+AGG | - | chr3_4:77722561-77722580 | None:intergenic | 40.0% | |
| ! | GCTTCTGGAAAAATCATTGG+TGG | - | chr3_4:77722681-77722700 | None:intergenic | 40.0% |
| TGGCGAACAAATGAAAACAG+AGG | + | chr3_4:77723026-77723045 | Msa0524210:intron | 40.0% | |
| TGCCGGAATATGAATGCTAT+TGG | + | chr3_4:77723447-77723466 | Msa0524210:CDS | 40.0% | |
| CGGAATATGAATGCTATTGG+AGG | + | chr3_4:77723450-77723469 | Msa0524210:CDS | 40.0% | |
| !! | AGTAGCTGTAGCTTTTGGAA+TGG | + | chr3_4:77723493-77723512 | Msa0524210:CDS | 40.0% |
| ATGGTTGCAGCAAGGAAATA+TGG | + | chr3_4:77723512-77723531 | Msa0524210:CDS | 40.0% | |
| ATGGTACAGACATGACATTG+TGG | + | chr3_4:77723531-77723550 | Msa0524210:CDS | 40.0% | |
| ACAGACATGACATTGTGGTA+TGG | + | chr3_4:77723536-77723555 | Msa0524210:CDS | 40.0% | |
| TCTCTCAAAAGAGTCCTGTA+AGG | - | chr3_4:77723581-77723600 | None:intergenic | 40.0% | |
| !! | TACAGGACTCTTTTGAGAGA+AGG | + | chr3_4:77723581-77723600 | Msa0524210:CDS | 40.0% |
| !! | ACAGGACTCTTTTGAGAGAA+GGG | + | chr3_4:77723582-77723601 | Msa0524210:CDS | 40.0% |
| CAAGTGGATGGTAAGAGAAT+TGG | - | chr3_4:77723640-77723659 | None:intergenic | 40.0% | |
| CAATTCTCTTACCATCCACT+TGG | + | chr3_4:77723638-77723657 | Msa0524210:CDS | 40.0% | |
| CATTTCATGAGGGCTAATTC+TGG | + | chr3_4:77723725-77723744 | Msa0524210:CDS | 40.0% | |
| AGTGGCCATTGATGGAACAA+AGG | + | chr3_4:77720932-77720951 | Msa0524210:CDS | 45.0% | |
| AAGGCAGATACTATGCTCAC+CGG | + | chr3_4:77720951-77720970 | Msa0524210:CDS | 45.0% | |
| ! | GTTCTTGCCATTTGCCAAAC+CGG | + | chr3_4:77721283-77721302 | Msa0524210:intron | 45.0% |
| TTTCACGAACTCAACCAGGT+TGG | - | chr3_4:77721444-77721463 | None:intergenic | 45.0% | |
| AGCATTTCACGAACTCAACC+AGG | - | chr3_4:77721448-77721467 | None:intergenic | 45.0% | |
| CAAAGTCACAACATGTGACC+AGG | - | chr3_4:77722059-77722078 | None:intergenic | 45.0% | |
| CCTAACTAAAACAGGAGAGG+GGG | - | chr3_4:77722104-77722123 | None:intergenic | 45.0% | |
| CCCTAACTAAAACAGGAGAG+GGG | - | chr3_4:77722105-77722124 | None:intergenic | 45.0% | |
| !!! | CCCCTCTCCTGTTTTAGTTA+GGG | + | chr3_4:77722102-77722121 | Msa0524210:intron | 45.0% |
| CACCCTAACTAAAACAGGAG+AGG | - | chr3_4:77722107-77722126 | None:intergenic | 45.0% | |
| !!! | CTCTCCTGTTTTAGTTAGGG+TGG | + | chr3_4:77722105-77722124 | Msa0524210:intron | 45.0% |
| AAGGCCACCCTAACTAAAAC+AGG | - | chr3_4:77722112-77722131 | None:intergenic | 45.0% | |
| ! | TTTGATGGAGCACCAGACTT+AGG | + | chr3_4:77722378-77722397 | Msa0524210:CDS | 45.0% |
| TGGTTGTTCTGCACATGTCT+CGG | + | chr3_4:77722401-77722420 | Msa0524210:CDS | 45.0% | |
| TGACATGGAGATGTATGCTG+TGG | + | chr3_4:77722509-77722528 | Msa0524210:CDS | 45.0% | |
| ! | CAGTATTGCATAGGTTGAGC+AGG | - | chr3_4:77722552-77722571 | None:intergenic | 45.0% |
| TGTGGAGGAGGAGAAGAAAT+GGG | - | chr3_4:77722621-77722640 | None:intergenic | 45.0% | |
| ATGTGGAGGAGGAGAAGAAA+TGG | - | chr3_4:77722622-77722641 | None:intergenic | 45.0% | |
| ! | ATTGGGGGTAGGTTGAAATG+TGG | - | chr3_4:77722639-77722658 | None:intergenic | 45.0% |
| ! | ATGGTGGAAGTTGTGGCATT+GGG | - | chr3_4:77722656-77722675 | None:intergenic | 45.0% |
| ! | AATGGTGGAAGTTGTGGCAT+TGG | - | chr3_4:77722657-77722676 | None:intergenic | 45.0% |
| CCTAGACCTCCTAATGTGTT+GGG | - | chr3_4:77722813-77722832 | None:intergenic | 45.0% | |
| CCAACACATTAGGAGGTCTA+GGG | + | chr3_4:77722811-77722830 | Msa0524210:intron | 45.0% | |
| GGTGATCTATGGGTACTACA+CGG | + | chr3_4:77723002-77723021 | Msa0524210:intron | 45.0% | |
| GTGATCTATGGGTACTACAC+GGG | + | chr3_4:77723003-77723022 | Msa0524210:intron | 45.0% | |
| AAAAGAAACACGCGCCAGAT+AGG | + | chr3_4:77723250-77723269 | Msa0524210:intron | 45.0% | |
| AAAGAAACACGCGCCAGATA+GGG | + | chr3_4:77723251-77723270 | Msa0524210:intron | 45.0% | |
| TTTCCTAAGCAGAAGGTCGT+AGG | - | chr3_4:77723283-77723302 | None:intergenic | 45.0% | |
| TGATAGGAAGTGGACAATGC+CGG | + | chr3_4:77723430-77723449 | Msa0524210:intron | 45.0% | |
| !!! | CTTTTGGAATGGTTGCAGCA+AGG | + | chr3_4:77723504-77723523 | Msa0524210:CDS | 45.0% |
| ACATTGTGGTATGGCCTGAA+AGG | + | chr3_4:77723545-77723564 | Msa0524210:CDS | 45.0% | |
| CATTGTGGTATGGCCTGAAA+GGG | + | chr3_4:77723546-77723565 | Msa0524210:CDS | 45.0% | |
| ATGTGTGTGACTACACCAAG+TGG | - | chr3_4:77723656-77723675 | None:intergenic | 45.0% | |
| !! | ATGCTTTGATGGGCTCAACT+AGG | + | chr3_4:77723681-77723700 | Msa0524210:CDS | 45.0% |
| !! | TGCTTTGATGGGCTCAACTA+GGG | + | chr3_4:77723682-77723701 | Msa0524210:CDS | 45.0% |
| ! | GTTTATGGTTTGGCTCAGGG+AGG | + | chr3_4:77721195-77721214 | Msa0524210:intron | 50.0% |
| !! | CGATTGACCGGTTTGGCAAA+TGG | - | chr3_4:77721293-77721312 | None:intergenic | 50.0% |
| ACTCTTGCGATTGACCGGTT+TGG | - | chr3_4:77721300-77721319 | None:intergenic | 50.0% | |
| !!! | CCCCCTCTCCTGTTTTAGTT+AGG | + | chr3_4:77722101-77722120 | Msa0524210:intron | 50.0% |
| TTGCCTCTAGTTGGGACAGT+TGG | + | chr3_4:77722158-77722177 | Msa0524210:intron | 50.0% | |
| TGCCTCTAGTTGGGACAGTT+GGG | + | chr3_4:77722159-77722178 | Msa0524210:intron | 50.0% | |
| GCAGAACAACCACCTAAGTC+TGG | - | chr3_4:77722393-77722412 | None:intergenic | 50.0% | |
| GGTTGTTCTGCACATGTCTC+GGG | + | chr3_4:77722402-77722421 | Msa0524210:CDS | 50.0% | |
| CAAGGAGGACCAATGAGTTG+TGG | + | chr3_4:77722438-77722457 | Msa0524210:CDS | 50.0% | |
| GGACCAATGAGTTGTGGTGA+AGG | + | chr3_4:77722444-77722463 | Msa0524210:CDS | 50.0% | |
| GCACCTTCACCACAACTCAT+TGG | - | chr3_4:77722450-77722469 | None:intergenic | 50.0% | |
| ! | ATGAGTTGTGGTGAAGGTGC+TGG | + | chr3_4:77722450-77722469 | Msa0524210:CDS | 50.0% |
| ! | GAAATGGGTGGTGCCAATGT+TGG | - | chr3_4:77722606-77722625 | None:intergenic | 50.0% |
| ! | GGTAGGTTGAAATGTGGAGG+AGG | - | chr3_4:77722633-77722652 | None:intergenic | 50.0% |
| TGGTGGAAGTTGTGGCATTG+GGG | - | chr3_4:77722655-77722674 | None:intergenic | 50.0% | |
| !! | GGTGGTAATGGTGGAAGTTG+TGG | - | chr3_4:77722663-77722682 | None:intergenic | 50.0% |
| GATGGACATGCTGAAGCTTC+TGG | - | chr3_4:77722696-77722715 | None:intergenic | 50.0% | |
| AAGAGTCGGCCCAACACATT+AGG | + | chr3_4:77722801-77722820 | Msa0524210:intron | 50.0% | |
| CCCAACACATTAGGAGGTCT+AGG | + | chr3_4:77722810-77722829 | Msa0524210:intron | 50.0% | |
| CCCTAGACCTCCTAATGTGT+TGG | - | chr3_4:77722814-77722833 | None:intergenic | 50.0% | |
| ATCTATGGGTACTACACGGG+TGG | + | chr3_4:77723006-77723025 | Msa0524210:intron | 50.0% | |
| GTCTAACACTGTTCAGGCAG+TGG | + | chr3_4:77723209-77723228 | Msa0524210:intron | 50.0% | |
| AAGAAACACGCGCCAGATAG+GGG | + | chr3_4:77723252-77723271 | Msa0524210:intron | 50.0% | |
| GAACCTACGACCTTCTGCTT+AGG | + | chr3_4:77723277-77723296 | Msa0524210:intron | 50.0% | |
| GCGTCTGTTTCCTAAGCAGA+AGG | - | chr3_4:77723290-77723309 | None:intergenic | 50.0% | |
| AACAAGCGCTTGTAGCTCAG+TGG | - | chr3_4:77723318-77723337 | None:intergenic | 50.0% | |
| AAGGATCTCCTCTCCCTTTC+AGG | - | chr3_4:77723562-77723581 | None:intergenic | 50.0% | |
| AAGGGAGAGGAGATCCTTAC+AGG | + | chr3_4:77723564-77723583 | Msa0524210:CDS | 50.0% | |
| GTGTGACTACACCAAGTGGA+TGG | - | chr3_4:77723652-77723671 | None:intergenic | 50.0% | |
| ATGAGGGCTAATTCTGGTGC+TGG | + | chr3_4:77723731-77723750 | Msa0524210:CDS | 50.0% | |
| TGCCCAACTGTCCCAACTAG+AGG | - | chr3_4:77722164-77722183 | None:intergenic | 55.0% | |
| ! | GATGGAGCACCAGACTTAGG+TGG | + | chr3_4:77722381-77722400 | Msa0524210:CDS | 55.0% |
| ! | TAGGTTGAGCAGGCTGAGCA+AGG | - | chr3_4:77722542-77722561 | None:intergenic | 55.0% |
| !! | ATGTTGGTGGTGGTGGGGAT+GGG | - | chr3_4:77722590-77722609 | None:intergenic | 55.0% |
| !! | AATGTTGGTGGTGGTGGGGA+TGG | - | chr3_4:77722591-77722610 | None:intergenic | 55.0% |
| ATCCCCACCACCACCAACAT+TGG | + | chr3_4:77722590-77722609 | Msa0524210:CDS | 55.0% | |
| !! | TGCCAATGTTGGTGGTGGTG+GGG | - | chr3_4:77722595-77722614 | None:intergenic | 55.0% |
| !! | GTGCCAATGTTGGTGGTGGT+GGG | - | chr3_4:77722596-77722615 | None:intergenic | 55.0% |
| ! | ATGGGTGGTGCCAATGTTGG+TGG | - | chr3_4:77722603-77722622 | None:intergenic | 55.0% |
| GGAGGAGGAGAAGAAATGGG+TGG | - | chr3_4:77722618-77722637 | None:intergenic | 55.0% | |
| ! | GGGGGTAGGTTGAAATGTGG+AGG | - | chr3_4:77722636-77722655 | None:intergenic | 55.0% |
| ! | GAAGTTGTGGCATTGGGGGT+AGG | - | chr3_4:77722650-77722669 | None:intergenic | 55.0% |
| ! | GGTGGAAGTTGTGGCATTGG+GGG | - | chr3_4:77722654-77722673 | None:intergenic | 55.0% |
| AGTCGGCCCAACACATTAGG+AGG | + | chr3_4:77722804-77722823 | Msa0524210:intron | 55.0% | |
| TCGTAGGTTCGACCCCTATC+TGG | - | chr3_4:77723267-77723286 | None:intergenic | 55.0% | |
| TGGTATGGCCTGAAAGGGAG+AGG | + | chr3_4:77723551-77723570 | Msa0524210:CDS | 55.0% | |
| AGTTGGGACAGTTGGGCAGC+TGG | + | chr3_4:77722166-77722185 | Msa0524210:intron | 60.0% | |
| TGAGCAGGCTGAGCAAGGAG+TGG | - | chr3_4:77722537-77722556 | None:intergenic | 60.0% | |
| !! | GGTGCCAATGTTGGTGGTGG+TGG | - | chr3_4:77722597-77722616 | None:intergenic | 60.0% |
| ! | GGTGGTGCCAATGTTGGTGG+TGG | - | chr3_4:77722600-77722619 | None:intergenic | 60.0% |
| !! | TGGTGGTGGTGGGGATGGGT+TGG | - | chr3_4:77722586-77722605 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 77720757 | 77723996 | 77720757 | ID=Msa0524210;Name=Msa0524210 |
| chr3_4 | mRNA | 77720757 | 77723996 | 77720757 | ID=Msa0524210-mRNA-1;Parent=Msa0524210;Name=Msa0524210-mRNA-1;_AED=0.32;_eAED=0.32;_QI=128|1|1|1|1|1|3|209|312 |
| chr3_4 | exon | 77720757 | 77721035 | 77720757 | ID=Msa0524210-mRNA-1:exon:22811;Parent=Msa0524210-mRNA-1 |
| chr3_4 | exon | 77722283 | 77722718 | 77722283 | ID=Msa0524210-mRNA-1:exon:22812;Parent=Msa0524210-mRNA-1 |
| chr3_4 | exon | 77723436 | 77723996 | 77723436 | ID=Msa0524210-mRNA-1:exon:22813;Parent=Msa0524210-mRNA-1 |
| chr3_4 | five_prime_UTR | 77720757 | 77720884 | 77720757 | ID=Msa0524210-mRNA-1:five_prime_utr;Parent=Msa0524210-mRNA-1 |
| chr3_4 | CDS | 77720885 | 77721035 | 77720885 | ID=Msa0524210-mRNA-1:cds;Parent=Msa0524210-mRNA-1 |
| chr3_4 | CDS | 77722283 | 77722718 | 77722283 | ID=Msa0524210-mRNA-1:cds;Parent=Msa0524210-mRNA-1 |
| chr3_4 | CDS | 77723436 | 77723787 | 77723436 | ID=Msa0524210-mRNA-1:cds;Parent=Msa0524210-mRNA-1 |
| chr3_4 | three_prime_UTR | 77723788 | 77723996 | 77723788 | ID=Msa0524210-mRNA-1:three_prime_utr;Parent=Msa0524210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
