Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0750160 | sp|Q9SXV6|CAS1_GLYGL | 79.608 | 765 | 85 | 2 | 1 | 765 | 1 | 694 | 0.0 | 1276 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0750160 | G7K980 | 89.673 | 765 | 8 | 2 | 1 | 765 | 1 | 694 | 0.0 | 1402 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0047640 | Msa0750160 | 0.802128 | 6.498210e-49 | -8.615850e-47 |
Msa0089980 | Msa0750160 | 0.803326 | 3.677781e-49 | -8.615850e-47 |
Msa0626270 | Msa0750160 | 0.823786 | 1.148492e-53 | -8.615850e-47 |
Msa0664540 | Msa0750160 | 0.822561 | 2.217420e-53 | -8.615850e-47 |
Msa0689760 | Msa0750160 | 0.816020 | 6.858328e-52 | -8.615850e-47 |
Msa0691340 | Msa0750160 | 0.812263 | 4.629875e-51 | -8.615850e-47 |
Msa0716500 | Msa0750160 | 0.812411 | 4.296527e-51 | -8.615850e-47 |
Msa0716860 | Msa0750160 | 0.806861 | 6.696771e-50 | -8.615850e-47 |
Msa0750160 | Msa0760770 | 0.809673 | 1.684555e-50 | -8.615850e-47 |
Msa0750160 | Msa0789560 | 0.818359 | 2.042143e-52 | -8.615850e-47 |
Msa0750160 | Msa0794740 | 0.980878 | 3.023209e-151 | -8.615850e-47 |
Msa0750160 | Msa0899970 | 0.801487 | 8.797483e-49 | -8.615850e-47 |
Msa0750160 | Msa0937430 | 0.802528 | 5.374279e-49 | -8.615850e-47 |
Msa0750160 | Msa0969330 | 0.817482 | 3.223154e-52 | -8.615850e-47 |
Msa0750160 | Msa1095790 | 0.826129 | 3.212656e-54 | -8.615850e-47 |
Msa0750160 | Msa1254620 | 0.818131 | 2.300755e-52 | -8.615850e-47 |
Msa0750160 | Msa1315570 | 0.805495 | 1.298953e-49 | -8.615850e-47 |
Msa0750160 | Msa1320820 | 0.803185 | 3.933582e-49 | -8.615850e-47 |
Msa0750160 | Msa1366550 | 0.810279 | 1.247299e-50 | -8.615850e-47 |
Msa0750160 | Msa1393820 | 0.807546 | 4.794432e-50 | -8.615850e-47 |
Msa0750160 | Msa1401460 | 0.801157 | 1.027945e-48 | -8.615850e-47 |
Msa0750160 | Msa1420250 | 0.814210 | 1.730180e-51 | -8.615850e-47 |
Msa0750160 | Msa1426910 | 0.834184 | 3.471538e-56 | -8.615850e-47 |
Msa0750160 | Msa1435260 | 0.808155 | 3.557989e-50 | -8.615850e-47 |
Msa0750160 | Msa1454960 | 0.808794 | 2.599593e-50 | -8.615850e-47 |
Msa0750160 | Msa1463030 | 0.804714 | 1.892281e-49 | -8.615850e-47 |
Msa0750160 | Msa1464370 | 0.811122 | 8.199246e-51 | -8.615850e-47 |
Msa0220730 | Msa0750160 | 0.804057 | 2.592492e-49 | -8.615850e-47 |
Msa0395980 | Msa0750160 | 0.814254 | 1.691825e-51 | -8.615850e-47 |
Msa0473980 | Msa0750160 | 0.802920 | 4.461478e-49 | -8.615850e-47 |
Msa0240650 | Msa0750160 | 0.830902 | 2.261202e-55 | -8.615850e-47 |
Msa0244970 | Msa0750160 | 0.805013 | 1.638142e-49 | -8.615850e-47 |
Msa0304100 | Msa0750160 | 0.811661 | 6.262263e-51 | -8.615850e-47 |
Msa0362890 | Msa0750160 | 0.806896 | 6.582787e-50 | -8.615850e-47 |
Msa0483740 | Msa0750160 | 0.823955 | 1.048345e-53 | -8.615850e-47 |
Msa0516120 | Msa0750160 | 0.804726 | 1.880629e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0750160 | MtrunA17_Chr5g0396321 | 89.673 | 765 | 8 | 2 | 1 | 765 | 1 | 694 | 0.0 | 1402 |
Msa0750160 | MtrunA17_Chr6g0488821 | 57.861 | 776 | 244 | 7 | 1 | 764 | 1 | 705 | 0.0 | 922 |
Msa0750160 | MtrunA17_Chr6g0488881 | 55.540 | 713 | 268 | 4 | 1 | 712 | 1 | 665 | 0.0 | 835 |
Msa0750160 | MtrunA17_Chr4g0000131 | 51.890 | 767 | 294 | 6 | 1 | 764 | 1 | 695 | 0.0 | 830 |
Msa0750160 | MtrunA17_Chr7g0228111 | 52.135 | 773 | 294 | 7 | 1 | 769 | 1 | 701 | 0.0 | 827 |
Msa0750160 | MtrunA17_Chr4g0020031 | 52.344 | 768 | 290 | 7 | 1 | 764 | 1 | 696 | 0.0 | 822 |
Msa0750160 | MtrunA17_Chr8g0342291 | 51.223 | 613 | 217 | 6 | 155 | 765 | 7 | 539 | 0.0 | 646 |
Msa0750160 | MtrunA17_Chr7g0238841 | 56.214 | 523 | 147 | 4 | 254 | 765 | 1 | 452 | 0.0 | 598 |
Msa0750160 | MtrunA17_Chr8g0342311 | 50.000 | 526 | 190 | 4 | 245 | 769 | 7 | 460 | 0.0 | 540 |
Msa0750160 | MtrunA17_Chr4g0000191 | 52.148 | 512 | 172 | 4 | 254 | 764 | 1 | 440 | 0.0 | 540 |
Msa0750160 | MtrunA17_Chr3g0090601 | 56.000 | 450 | 186 | 6 | 44 | 491 | 18 | 457 | 2.22e-180 | 533 |
Msa0750160 | MtrunA17_Chr3g0090601 | 47.692 | 195 | 77 | 1 | 570 | 764 | 457 | 626 | 4.76e-46 | 175 |
Msa0750160 | MtrunA17_Chr8g0342271 | 58.863 | 299 | 120 | 3 | 155 | 451 | 15 | 312 | 9.08e-130 | 390 |
Msa0750160 | MtrunA17_Chr7g0238831 | 56.028 | 282 | 107 | 4 | 1 | 271 | 1 | 276 | 2.57e-102 | 317 |
Msa0750160 | MtrunA17_Chr6g0486401 | 64.141 | 198 | 70 | 1 | 254 | 450 | 1 | 198 | 2.82e-91 | 285 |
Msa0750160 | MtrunA17_Chr6g0486411 | 47.910 | 311 | 70 | 4 | 456 | 765 | 5 | 224 | 5.02e-81 | 261 |
Msa0750160 | MtrunA17_Chr6g0486391 | 63.636 | 187 | 56 | 2 | 88 | 263 | 1 | 186 | 7.08e-80 | 254 |
Msa0750160 | MtrunA17_Chr6g0463701 | 53.917 | 217 | 99 | 1 | 307 | 523 | 12 | 227 | 8.95e-80 | 256 |
Msa0750160 | MtrunA17_Chr8g0342321 | 54.595 | 185 | 83 | 1 | 69 | 252 | 6 | 190 | 9.14e-70 | 227 |
Msa0750160 | MtrunA17_Chr4g0000181 | 52.880 | 191 | 89 | 1 | 69 | 258 | 5 | 195 | 6.04e-69 | 226 |
Msa0750160 | MtrunA17_Chr6g0463651 | 43.321 | 277 | 86 | 2 | 489 | 765 | 1 | 206 | 3.66e-68 | 225 |
Msa0750160 | MtrunA17_Chr6g0463661 | 53.216 | 171 | 79 | 1 | 320 | 490 | 1 | 170 | 1.47e-57 | 194 |
Msa0750160 | MtrunA17_Chr8g0342251 | 46.597 | 191 | 77 | 1 | 573 | 763 | 6 | 171 | 1.02e-54 | 187 |
Msa0750160 | MtrunA17_Chr6g0463721 | 51.266 | 158 | 76 | 1 | 1 | 158 | 1 | 157 | 2.37e-50 | 175 |
Msa0750160 | MtrunA17_Chr8g0342301 | 49.686 | 159 | 79 | 1 | 1 | 158 | 1 | 159 | 4.71e-49 | 170 |
Msa0750160 | MtrunA17_Chr8g0342241 | 40.179 | 224 | 83 | 2 | 489 | 712 | 2 | 174 | 7.78e-47 | 164 |
Msa0750160 | MtrunA17_Chr8g0342281 | 50.000 | 132 | 65 | 1 | 1 | 131 | 1 | 132 | 1.05e-37 | 137 |
Msa0750160 | MtrunA17_Chr6g0463691 | 54.464 | 112 | 26 | 1 | 653 | 764 | 8 | 94 | 4.48e-33 | 124 |
Msa0750160 | MtrunA17_Chr6g0463671 | 55.932 | 59 | 26 | 0 | 254 | 312 | 1 | 59 | 6.37e-19 | 81.3 |
Msa0750160 | MtrunA17_Chr8g0342261 | 57.812 | 64 | 27 | 0 | 447 | 510 | 29 | 92 | 1.64e-18 | 82.0 |
Msa0750160 | MtrunA17_Chr8g0342331 | 45.783 | 83 | 40 | 2 | 1 | 78 | 1 | 83 | 7.76e-18 | 79.0 |
Msa0750160 | MtrunA17_Chr6g0486381 | 47.826 | 69 | 33 | 1 | 1 | 66 | 1 | 69 | 8.83e-17 | 75.9 |
Msa0750160 | MtrunA17_Chr3g0090611 | 52.239 | 67 | 31 | 1 | 1 | 66 | 1 | 67 | 5.46e-16 | 73.9 |
Msa0750160 | MtrunA17_Chr6g0463711 | 51.852 | 54 | 26 | 0 | 254 | 307 | 1 | 54 | 9.35e-14 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0750160 | AT2G07050.1 | 72.680 | 765 | 138 | 2 | 1 | 765 | 1 | 694 | 0.0 | 1185 |
Msa0750160 | AT2G07050.2 | 73.848 | 673 | 105 | 2 | 93 | 765 | 2 | 603 | 0.0 | 1050 |
Msa0750160 | AT3G45130.2 | 58.931 | 767 | 238 | 5 | 1 | 764 | 1 | 693 | 0.0 | 881 |
Msa0750160 | AT3G45130.3 | 58.931 | 767 | 238 | 5 | 1 | 764 | 1 | 693 | 0.0 | 881 |
Msa0750160 | AT3G45130.4 | 58.931 | 767 | 238 | 5 | 1 | 764 | 1 | 693 | 0.0 | 881 |
Msa0750160 | AT3G45130.1 | 58.931 | 767 | 238 | 5 | 1 | 764 | 1 | 693 | 0.0 | 881 |
Msa0750160 | AT3G45130.5 | 58.931 | 767 | 238 | 5 | 1 | 764 | 1 | 693 | 0.0 | 881 |
Msa0750160 | AT1G78960.2 | 51.432 | 768 | 297 | 6 | 1 | 764 | 1 | 696 | 0.0 | 815 |
Msa0750160 | AT1G78960.1 | 51.432 | 768 | 297 | 6 | 1 | 764 | 1 | 696 | 0.0 | 815 |
Msa0750160 | AT1G78960.3 | 51.432 | 768 | 297 | 6 | 1 | 764 | 1 | 696 | 0.0 | 815 |
Msa0750160 | AT1G78960.4 | 51.432 | 768 | 297 | 6 | 1 | 764 | 1 | 696 | 0.0 | 815 |
Msa0750160 | AT1G78955.1 | 51.823 | 768 | 294 | 6 | 1 | 764 | 1 | 696 | 0.0 | 810 |
Msa0750160 | AT1G78950.2 | 51.823 | 768 | 294 | 6 | 1 | 764 | 10 | 705 | 0.0 | 804 |
Msa0750160 | AT1G78950.1 | 51.823 | 768 | 294 | 6 | 1 | 764 | 1 | 696 | 0.0 | 803 |
Msa0750160 | AT1G66960.3 | 48.375 | 769 | 321 | 6 | 1 | 765 | 1 | 697 | 0.0 | 766 |
Msa0750160 | AT1G66960.1 | 48.375 | 769 | 321 | 6 | 1 | 765 | 1 | 697 | 0.0 | 766 |
Msa0750160 | AT1G66960.4 | 48.375 | 769 | 321 | 6 | 1 | 765 | 1 | 697 | 0.0 | 766 |
Msa0750160 | AT1G66960.2 | 48.375 | 769 | 321 | 6 | 1 | 765 | 10 | 706 | 0.0 | 765 |
Msa0750160 | AT1G78970.1 | 48.892 | 767 | 315 | 6 | 1 | 764 | 1 | 693 | 0.0 | 751 |
Msa0750160 | AT1G78970.2 | 48.892 | 767 | 315 | 6 | 1 | 764 | 1 | 693 | 0.0 | 751 |
Msa0750160 | AT1G78970.3 | 48.892 | 767 | 315 | 6 | 1 | 764 | 1 | 693 | 0.0 | 751 |
Msa0750160 | AT1G78955.4 | 52.279 | 702 | 261 | 5 | 65 | 764 | 2 | 631 | 0.0 | 745 |
Msa0750160 | AT1G78955.2 | 52.279 | 702 | 261 | 5 | 65 | 764 | 2 | 631 | 0.0 | 744 |
Msa0750160 | AT1G78955.3 | 54.615 | 650 | 246 | 4 | 65 | 712 | 2 | 604 | 0.0 | 737 |
Msa0750160 | AT5G36150.1 | 44.589 | 767 | 349 | 6 | 1 | 763 | 1 | 695 | 0.0 | 708 |
Msa0750160 | AT5G36150.2 | 44.589 | 767 | 349 | 6 | 1 | 763 | 1 | 695 | 0.0 | 708 |
Msa0750160 | AT1G78500.2 | 44.631 | 773 | 346 | 9 | 1 | 763 | 1 | 701 | 0.0 | 694 |
Msa0750160 | AT1G78500.1 | 44.631 | 773 | 346 | 9 | 1 | 763 | 1 | 701 | 0.0 | 694 |
Msa0750160 | AT4G15370.2 | 43.984 | 773 | 346 | 9 | 1 | 765 | 1 | 694 | 0.0 | 680 |
Msa0750160 | AT4G15340.1 | 44.301 | 772 | 349 | 8 | 1 | 763 | 1 | 700 | 0.0 | 677 |
Msa0750160 | AT4G15370.1 | 43.428 | 776 | 349 | 9 | 1 | 765 | 1 | 697 | 0.0 | 675 |
Msa0750160 | AT5G48010.2 | 42.746 | 772 | 361 | 7 | 1 | 763 | 1 | 700 | 0.0 | 673 |
Msa0750160 | AT1G78960.5 | 52.188 | 617 | 221 | 5 | 150 | 764 | 1 | 545 | 0.0 | 664 |
Msa0750160 | AT5G48010.1 | 42.358 | 772 | 356 | 8 | 1 | 763 | 1 | 692 | 0.0 | 661 |
Msa0750160 | AT5G42600.1 | 42.578 | 768 | 364 | 7 | 1 | 763 | 1 | 696 | 0.0 | 635 |
Msa0750160 | AT1G78955.5 | 52.277 | 593 | 209 | 5 | 174 | 764 | 1 | 521 | 0.0 | 616 |
Msa0750160 | AT3G29255.1 | 39.635 | 767 | 327 | 10 | 2 | 763 | 6 | 641 | 0.0 | 557 |
Msa0750160 | AT4G15340.2 | 44.300 | 614 | 286 | 7 | 1 | 605 | 1 | 567 | 0.0 | 541 |
Msa0750160 | AT1G78480.1 | 37.143 | 140 | 82 | 3 | 58 | 194 | 36 | 172 | 2.09e-19 | 87.8 |
Find 210 sgRNAs with CRISPR-Local
Find 704 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCACTTGGTTTGGGGTAAA+AGG | 0.154236 | 5_2:+3568984 | Msa0750160:CDS |
TGTTCAGGTGTATTCAAATT+TGG | 0.159318 | 5_2:+3570388 | Msa0750160:intron |
TCACTTATGGCACTTGGTTT+GGG | 0.188803 | 5_2:+3568976 | Msa0750160:CDS |
ACTAACCTAATTGAAGAATT+TGG | 0.231134 | 5_2:+3566567 | Msa0750160:CDS |
CACTCGTGCAAGATATTCTT+TGG | 0.236923 | 5_2:+3565902 | Msa0750160:CDS |
TTCACTTATGGCACTTGGTT+TGG | 0.237239 | 5_2:+3568975 | Msa0750160:CDS |
TCAAGAATTACCTTATTTAC+AGG | 0.242278 | 5_2:-3566057 | None:intergenic |
TGGGGAGTTTGCTTCACTTA+TGG | 0.245949 | 5_2:+3568963 | Msa0750160:CDS |
TTCAGGCTTTGTCAACATTT+AGG | 0.256339 | 5_2:+3568658 | Msa0750160:CDS |
TTGGACCAAATTCTTCAATT+AGG | 0.261321 | 5_2:-3566572 | None:intergenic |
CAAGGATCCATGATTATCTA+TGG | 0.267663 | 5_2:+3566270 | Msa0750160:CDS |
AAATGTCATTATCTCATTAC+AGG | 0.283951 | 5_2:+3566981 | Msa0750160:CDS |
CAAGGCCAATTCATGAAAAT+AGG | 0.293099 | 5_2:-3565949 | None:intergenic |
GATAATATTGTTGGTGTGAT+TGG | 0.294184 | 5_2:-3565197 | None:intergenic |
TATTTCTTCCCGACGATGCC+TGG | 0.295572 | 5_2:-3568691 | None:intergenic |
GCCAATCCTGCTGAAACTTT+TGG | 0.309739 | 5_2:+3568482 | Msa0750160:CDS |
TTCCTTCATCGGATTCTCTT+TGG | 0.323424 | 5_2:-3563951 | None:intergenic |
GCAGCTCCCATCTGGTGGTT+GGG | 0.324085 | 5_2:+3569079 | Msa0750160:CDS |
TGCTAACCAGGTATGGTTCT+TGG | 0.326714 | 5_2:+3568943 | Msa0750160:intron |
TTGCATAGGTCCTGTAAATA+AGG | 0.328833 | 5_2:+3566047 | Msa0750160:CDS |
AAACGATGGAGAAGGGGATA+TGG | 0.329008 | 5_2:+3564707 | Msa0750160:CDS |
TTCTTACCTGATGATTATAA+AGG | 0.337163 | 5_2:-3564522 | None:intergenic |
GTGTACCTCAGCAGCAATTC+AGG | 0.340622 | 5_2:+3568641 | Msa0750160:CDS |
AGGAGGCAGGGGATTATTTC+CGG | 0.351958 | 5_2:-3564914 | None:intergenic |
AATAATTACTTTCAGTCCTT+CGG | 0.352555 | 5_2:-3566818 | None:intergenic |
TTGACGAACGGATTCGATAT+CGG | 0.352813 | 5_2:-3563864 | None:intergenic |
GGCTCTCATTGAGGCTGAAC+AGG | 0.356102 | 5_2:+3570454 | Msa0750160:CDS |
TACAAGCTTCAGATGGTTCA+TGG | 0.356145 | 5_2:+3568754 | Msa0750160:CDS |
GTCCTGGTGATCTTAGTAAA+TGG | 0.357085 | 5_2:+3566722 | Msa0750160:CDS |
AACCTTTGCACATAAATTGC+GGG | 0.357292 | 5_2:-3565273 | None:intergenic |
GAACAAGAACCTGGATGAAA+TGG | 0.363407 | 5_2:-3564964 | None:intergenic |
GCTAACCAGGTATGGTTCTT+GGG | 0.364562 | 5_2:+3568944 | Msa0750160:intron |
AACTTGAAAGCCTCTGAATA+TGG | 0.367733 | 5_2:-3566239 | None:intergenic |
TCCATGATCTTTAGTTGAAA+AGG | 0.374641 | 5_2:-3566773 | None:intergenic |
TACTCGGAAGTCTTTCTGTT+TGG | 0.375290 | 5_2:+3567536 | Msa0750160:CDS |
TTTCTCAAAGATAATATTGT+TGG | 0.376453 | 5_2:-3565206 | None:intergenic |
GGTCCTATGTTTCTTATGCC+TGG | 0.385468 | 5_2:+3564106 | Msa0750160:CDS |
TCACGTCGGCAGACAACTTT+GGG | 0.389059 | 5_2:+3563805 | Msa0750160:CDS |
AAACACTGGGTGGGCTATGC+TGG | 0.390877 | 5_2:+3570433 | Msa0750160:CDS |
ACATCTTTCACTCTCACTTT+CGG | 0.391173 | 5_2:-3563980 | None:intergenic |
TCTTGTGGCGATCCGGAGTT+AGG | 0.392406 | 5_2:-3563836 | None:intergenic |
ATATCCCCTTCTCCATCGTT+TGG | 0.404510 | 5_2:-3564705 | None:intergenic |
GAAGGTCCAAGCACCATGTT+TGG | 0.406473 | 5_2:+3564639 | Msa0750160:CDS |
CTGTCTAAGCAGCTCCCATC+TGG | 0.406747 | 5_2:+3569071 | Msa0750160:CDS |
CAGAATAAGGATGGTGGGTG+GGG | 0.410991 | 5_2:+3564606 | Msa0750160:intron |
TCGGAAGTCTTTCTGTTTGG+TGG | 0.411875 | 5_2:+3567539 | Msa0750160:CDS |
ATTCAAATTTGGAAAGCAAC+AGG | 0.422710 | 5_2:+3570399 | Msa0750160:CDS |
GAAGATCATCGCTGTGTTTG+TGG | 0.425232 | 5_2:-3563910 | None:intergenic |
TCGTTACCTTTATAATCATC+AGG | 0.425456 | 5_2:+3564516 | Msa0750160:CDS |
GTATGAGCCTTTCTTAGAGT+TGG | 0.426533 | 5_2:-3566591 | None:intergenic |
TATGTTACTCTAAGATTGCT+TGG | 0.426624 | 5_2:+3564675 | Msa0750160:CDS |
TATGTTTCTTATGCCTGGCT+TGG | 0.426756 | 5_2:+3564111 | Msa0750160:CDS |
GATGATTAAAATGACGATGA+TGG | 0.428687 | 5_2:-3567511 | None:intergenic |
TTCGGTATCACTTCCTTCAT+CGG | 0.438591 | 5_2:-3563962 | None:intergenic |
GCACTTGGTTTGGGGTAAAA+GGG | 0.440113 | 5_2:+3568985 | Msa0750160:CDS |
GTAAAAGGGCTGATTGCTGC+TGG | 0.442118 | 5_2:+3568999 | Msa0750160:CDS |
ATGATTAAAATGACGATGAT+GGG | 0.443557 | 5_2:-3567510 | None:intergenic |
TGCTAAATATGCTTTGCTGC+TGG | 0.443767 | 5_2:+3566207 | Msa0750160:CDS |
GGTTCACAGGGAATGCTTGT+TGG | 0.447314 | 5_2:+3572847 | Msa0750160:CDS |
TCGGCTGTGCAGTCAGATAT+TGG | 0.447702 | 5_2:-3566799 | None:intergenic |
ATCCCCTGCCTCCTGAGTTA+TGG | 0.448287 | 5_2:+3564923 | Msa0750160:CDS |
AGCAGCTCCCATCTGGTGGT+TGG | 0.448991 | 5_2:+3569078 | Msa0750160:CDS |
TGCTTCGAGAAGAGATGTCT+TGG | 0.450381 | 5_2:-3563555 | None:intergenic |
GTGCTACTCATATAACATCC+TGG | 0.451599 | 5_2:+3564763 | Msa0750160:CDS |
TTGTACGGAAAGAGGTTTGT+TGG | 0.453298 | 5_2:+3565173 | Msa0750160:CDS |
CAATCACTGCAGAATGAAGA+TGG | 0.453523 | 5_2:+3567785 | Msa0750160:intron |
ATCACGTCGGCAGACAACTT+TGG | 0.455540 | 5_2:+3563804 | Msa0750160:CDS |
CCATGATGTAGACTGGAATC+AGG | 0.455918 | 5_2:+3565250 | Msa0750160:CDS |
TGTCGTTGTTGGTAGGTACT+TGG | 0.456413 | 5_2:+3564877 | Msa0750160:intron |
CTTGGAGTGTTTGAATGGTC+CGG | 0.458818 | 5_2:+3564895 | Msa0750160:CDS |
AACTATATCCCAGGCATCGT+CGG | 0.461132 | 5_2:+3568682 | Msa0750160:CDS |
GGGTGGGGTTTGCATATTGA+AGG | 0.463918 | 5_2:+3564621 | Msa0750160:CDS |
AGAGGTTGTCACAGGTTCAC+AGG | 0.468864 | 5_2:+3572834 | Msa0750160:CDS |
CATAGATAATCATGGATCCT+TGG | 0.470111 | 5_2:-3566269 | None:intergenic |
GGATGAAATGGAAGAATGTA+TGG | 0.473706 | 5_2:-3564952 | None:intergenic |
ATATGGAGAAGGCACGTGAC+TGG | 0.476887 | 5_2:+3564724 | Msa0750160:CDS |
TTCTTTGCTATATAGTTATG+TGG | 0.477165 | 5_2:+3568617 | Msa0750160:intron |
GCCAAAAGTTTCAGCAGGAT+TGG | 0.477251 | 5_2:-3568483 | None:intergenic |
CACTTATGGCACTTGGTTTG+GGG | 0.478518 | 5_2:+3568977 | Msa0750160:CDS |
GCTAAATATGCTTTGCTGCT+GGG | 0.479109 | 5_2:+3566208 | Msa0750160:CDS |
CCCACCCAGTGTTTACTACA+TGG | 0.481032 | 5_2:-3570424 | None:intergenic |
AAGATCATCGCTGTGTTTGT+GGG | 0.482356 | 5_2:-3563909 | None:intergenic |
TTTGCTTCACTTATGGCACT+TGG | 0.482779 | 5_2:+3568970 | Msa0750160:CDS |
AGAGTATGCAAAATTAAGAA+TGG | 0.483557 | 5_2:+3569362 | Msa0750160:CDS |
CCATGATCTTTAGTTGAAAA+GGG | 0.483692 | 5_2:-3566772 | None:intergenic |
CGATGATGGGGAGAAGATGA+TGG | 0.484663 | 5_2:-3567497 | None:intergenic |
CAGCTCCCATCTGGTGGTTG+GGG | 0.485523 | 5_2:+3569080 | Msa0750160:CDS |
GATTTGATTTGATTTGAAAG+AGG | 0.486352 | 5_2:-3563501 | None:intergenic |
ACTCGTGCAAGATATTCTTT+GGG | 0.489176 | 5_2:+3565903 | Msa0750160:CDS |
GTAATTACTCTGTCTATCAC+TGG | 0.492845 | 5_2:+3564448 | Msa0750160:CDS |
AAAATTGCACCTGAGATTGT+TGG | 0.494234 | 5_2:+3566922 | Msa0750160:CDS |
ACTATATCCCAGGCATCGTC+GGG | 0.496045 | 5_2:+3568683 | Msa0750160:CDS |
TTGCCAATGTGCTACTTGTA+CGG | 0.496391 | 5_2:+3565158 | Msa0750160:CDS |
TGCTACTCATATAACATCCT+GGG | 0.497785 | 5_2:+3564764 | Msa0750160:CDS |
GGCGAGATCTTGTGGCGATC+CGG | 0.498854 | 5_2:-3563843 | None:intergenic |
TGTGCTACTTGTACGGAAAG+AGG | 0.500165 | 5_2:+3565165 | Msa0750160:CDS |
TATAATCTCTTTGCATCCAA+TGG | 0.500385 | 5_2:-3566949 | None:intergenic |
TACATTCTTCCATTTCATCC+AGG | 0.500398 | 5_2:+3564955 | Msa0750160:CDS |
GGAGCCATAACTCAGGAGGC+AGG | 0.500631 | 5_2:-3564927 | None:intergenic |
CAGCAATCCATAGATAATCA+TGG | 0.500824 | 5_2:-3566277 | None:intergenic |
CTTTCAAGTTGCATCTTCCA+AGG | 0.503157 | 5_2:+3566252 | Msa0750160:CDS |
AATGGTTCACCAACAATCTC+AGG | 0.503298 | 5_2:-3566931 | None:intergenic |
ACAGAATAAGGATGGTGGGT+GGG | 0.505290 | 5_2:+3564605 | Msa0750160:intron |
TGGTACCGTCACATTTCAAA+AGG | 0.507661 | 5_2:+3566742 | Msa0750160:CDS |
AGGTACTTGGAGTGTTTGAA+TGG | 0.508132 | 5_2:+3564890 | Msa0750160:intron |
GTCACATTTCAAAAGGTGCT+TGG | 0.511679 | 5_2:+3566749 | Msa0750160:CDS |
CACTCGATCTTATAGCTGGT+TGG | 0.515521 | 5_2:+3567829 | Msa0750160:CDS |
CTTAACAGACGAGCATAGAA+AGG | 0.518691 | 5_2:+3564486 | Msa0750160:CDS |
TACCATACCATGATGTAGAC+TGG | 0.519792 | 5_2:+3565243 | Msa0750160:CDS |
TACATTCATTAAGAATTCAC+AGG | 0.520406 | 5_2:+3566611 | Msa0750160:CDS |
AGCTCACTCGATCTTATAGC+TGG | 0.520911 | 5_2:+3567825 | Msa0750160:CDS |
ATTTCTTCCCGACGATGCCT+GGG | 0.521004 | 5_2:-3568690 | None:intergenic |
ACAGAACCAAACATGGTGCT+TGG | 0.522416 | 5_2:-3564645 | None:intergenic |
ATTTGGTCCAACTCTAAGAA+AGG | 0.522891 | 5_2:+3566584 | Msa0750160:CDS |
ATGTCGCCAAAAGTTTCAGC+AGG | 0.523669 | 5_2:-3568488 | None:intergenic |
AGGGACCAAACGATGGAGAA+GGG | 0.525654 | 5_2:+3564700 | Msa0750160:CDS |
TGAGATTGTTGGTGAACCAT+TGG | 0.526436 | 5_2:+3566933 | Msa0750160:CDS |
TCGATATCGGCGAGATCTTG+TGG | 0.529568 | 5_2:-3563851 | None:intergenic |
GAGGGACCAAACGATGGAGA+AGG | 0.529699 | 5_2:+3564699 | Msa0750160:CDS |
GCTACAATGGAAGTCAGCTA+TGG | 0.532783 | 5_2:+3566511 | Msa0750160:CDS |
CATTGGCCTGGTGATTATGC+TGG | 0.535461 | 5_2:+3564085 | Msa0750160:CDS |
TCAACTCTTCAGAGTCATGA+TGG | 0.536089 | 5_2:+3564061 | Msa0750160:CDS |
CTCTCTCCCCAACCACCAGA+TGG | 0.536827 | 5_2:-3569086 | None:intergenic |
AAGGTTTCAGAAGATTGTCC+TGG | 0.537463 | 5_2:+3566706 | Msa0750160:intron |
GGCCCGCAATTTATGTGCAA+AGG | 0.538650 | 5_2:+3565271 | Msa0750160:CDS |
TTGTTTAATGTACGAAGCCA+TGG | 0.540863 | 5_2:-3563782 | None:intergenic |
AAAGGCTGTCGAGACTGTAA+TGG | 0.544441 | 5_2:+3565987 | Msa0750160:CDS |
AATACTCGTTATATTTGCAT+AGG | 0.544620 | 5_2:+3566033 | Msa0750160:CDS |
TATGCATTATAGGAAGGATG+TGG | 0.544658 | 5_2:+3565114 | Msa0750160:intron |
CTACTAAAACTTACCAAGCC+AGG | 0.544748 | 5_2:-3564124 | None:intergenic |
GGCTATGCTGGCTCTCATTG+AGG | 0.544878 | 5_2:+3570445 | Msa0750160:CDS |
ACATTGGCAAATAGACCATC+CGG | 0.547166 | 5_2:-3565145 | None:intergenic |
AGCCATAACTCAGGAGGCAG+GGG | 0.548779 | 5_2:-3564925 | None:intergenic |
AATCACTGCAGAATGAAGAT+GGG | 0.549445 | 5_2:+3567786 | Msa0750160:intron |
ATATCTTGCACGAGTGGGTG+AGG | 0.549536 | 5_2:-3565895 | None:intergenic |
TAAAAGGGCTGATTGCTGCT+GGG | 0.551591 | 5_2:+3569000 | Msa0750160:CDS |
GTGTGACAACAACATTAAGA+AGG | 0.552439 | 5_2:+3564023 | Msa0750160:CDS |
TTGCAGAAGGAGGCAGTCCA+TGG | 0.553517 | 5_2:+3563765 | Msa0750160:CDS |
ACTCTAAGATTGCTTGGTGA+GGG | 0.559954 | 5_2:+3564681 | Msa0750160:CDS |
TGCCAAAGAGAATCCGATGA+AGG | 0.562401 | 5_2:+3563949 | Msa0750160:CDS |
TAGCAATGGTTTCAAGCATG+TGG | 0.569111 | 5_2:+3569332 | Msa0750160:intron |
TAATTACTCTGTCTATCACT+GGG | 0.569870 | 5_2:+3564449 | Msa0750160:CDS |
GAGCCATAACTCAGGAGGCA+GGG | 0.570773 | 5_2:-3564926 | None:intergenic |
TTCCAGTCTACATCATGGTA+TGG | 0.571064 | 5_2:-3565245 | None:intergenic |
TATGTATTACAGAATAAGGA+TGG | 0.571921 | 5_2:+3564597 | Msa0750160:intron |
GAAGGATGTGGTGTCACTGC+CGG | 0.574105 | 5_2:+3565126 | Msa0750160:CDS |
TAACCTTTGCACATAAATTG+CGG | 0.575081 | 5_2:-3565274 | None:intergenic |
TATCTATGGATTGCTGAAGA+TGG | 0.576188 | 5_2:+3566284 | Msa0750160:CDS |
TCGATCTTATAGCTGGTTGG+AGG | 0.576532 | 5_2:+3567832 | Msa0750160:CDS |
AAGCCAGGCATAAGAAACAT+AGG | 0.576662 | 5_2:-3564109 | None:intergenic |
CTACAATGGAAGTCAGCTAT+GGG | 0.577848 | 5_2:+3566512 | Msa0750160:CDS |
GAAATGGAAGAATGTATGGA+AGG | 0.579493 | 5_2:-3564948 | None:intergenic |
TATTACAGAATAAGGATGGT+GGG | 0.583496 | 5_2:+3564601 | Msa0750160:intron |
TTCAGAGTCATGATGGACAT+TGG | 0.583711 | 5_2:+3564068 | Msa0750160:CDS |
TACTCTAAGATTGCTTGGTG+AGG | 0.584020 | 5_2:+3564680 | Msa0750160:CDS |
TTTCAACTAAAGATCATGGA+TGG | 0.584652 | 5_2:+3566776 | Msa0750160:CDS |
CATTTAGGAAACTATATCCC+AGG | 0.586640 | 5_2:+3568673 | Msa0750160:CDS |
AGGTCCCATGTAGTAAACAC+TGG | 0.589141 | 5_2:+3570419 | Msa0750160:CDS |
CAAAGAATATCTTGCACGAG+TGG | 0.591667 | 5_2:-3565901 | None:intergenic |
GAGGTTGTCACAGGTTCACA+GGG | 0.594117 | 5_2:+3572835 | Msa0750160:CDS |
TTACTGAACATAGGCTAGAG+AGG | 0.594939 | 5_2:+3572816 | Msa0750160:intron |
CCTGATTCCAGTCTACATCA+TGG | 0.595918 | 5_2:-3565250 | None:intergenic |
TCTAAGCAGCTCCCATCTGG+TGG | 0.600699 | 5_2:+3569074 | Msa0750160:CDS |
TGGAGAAGGGGATATGGAGA+AGG | 0.601781 | 5_2:+3564713 | Msa0750160:CDS |
GTATTACAGAATAAGGATGG+TGG | 0.602509 | 5_2:+3564600 | Msa0750160:intron |
TGGGAGTTCGATCCTAACTC+CGG | 0.605594 | 5_2:+3563824 | Msa0750160:CDS |
CTAACCAGGTATGGTTCTTG+GGG | 0.606522 | 5_2:+3568945 | Msa0750160:intron |
GATGATGGGGAGAAGATGAT+GGG | 0.606523 | 5_2:-3567496 | None:intergenic |
AGTCATGATGGACATTGGCC+TGG | 0.607121 | 5_2:+3564073 | Msa0750160:CDS |
TAGGCTAGAGAGGTTGTCAC+AGG | 0.609136 | 5_2:+3572826 | Msa0750160:intron |
TCTCTCCCCAACCACCAGAT+GGG | 0.609976 | 5_2:-3569085 | None:intergenic |
TACAGAATAAGGATGGTGGG+TGG | 0.611556 | 5_2:+3564604 | Msa0750160:intron |
ATCACTGCAGAATGAAGATG+GGG | 0.616662 | 5_2:+3567787 | Msa0750160:intron |
ACTCAAAACAGAACCAAACA+TGG | 0.622100 | 5_2:-3564652 | None:intergenic |
CGAAGGCGGTGATAAAGAGA+AGG | 0.623105 | 5_2:-3567570 | None:intergenic |
GAGTGAGCTCATATGTTGCA+AGG | 0.623263 | 5_2:-3567811 | None:intergenic |
AAAGAATATCTTGCACGAGT+GGG | 0.627826 | 5_2:-3565900 | None:intergenic |
CCCATGTAGTAAACACTGGG+TGG | 0.632415 | 5_2:+3570423 | Msa0750160:CDS |
TGAAGATGGCATGAAAATGC+AGG | 0.633629 | 5_2:+3566298 | Msa0750160:CDS |
ATATCTGACTGCACAGCCGA+AGG | 0.633759 | 5_2:+3566802 | Msa0750160:CDS |
CGTGACTGGATTCTTGAGCA+TGG | 0.634097 | 5_2:+3564738 | Msa0750160:CDS |
CAAAGCCTGAATTGCTGCTG+AGG | 0.637022 | 5_2:-3568646 | None:intergenic |
TGATTAAAATGACGATGATG+GGG | 0.637051 | 5_2:-3567509 | None:intergenic |
CCATGTAGTAAACACTGGGT+GGG | 0.637163 | 5_2:+3570424 | Msa0750160:CDS |
TTTCCGTACAAGTAGCACAT+TGG | 0.637997 | 5_2:-3565161 | None:intergenic |
TGTGACAACAACATTAAGAA+GGG | 0.639121 | 5_2:+3564024 | Msa0750160:CDS |
GCTACTCATATAACATCCTG+GGG | 0.640093 | 5_2:+3564765 | Msa0750160:CDS |
CTTGGTGAGGGACCAAACGA+TGG | 0.640301 | 5_2:+3564693 | Msa0750160:CDS |
GGGACCAAACGATGGAGAAG+GGG | 0.640614 | 5_2:+3564701 | Msa0750160:CDS |
TTATCTTTCATGTCAAAACA+AGG | 0.642811 | 5_2:+3569109 | Msa0750160:CDS |
TCTTTGGGCAACTCTACACA+AGG | 0.644183 | 5_2:+3565918 | Msa0750160:CDS |
CGGTGATAAAGAGAAGGCTG+AGG | 0.644788 | 5_2:-3567564 | None:intergenic |
TACCATTTACTAAGATCACC+AGG | 0.645528 | 5_2:-3566724 | None:intergenic |
TGGAAACTGAAAGTTGCAGA+AGG | 0.645676 | 5_2:+3563752 | Msa0750160:CDS |
AGCAATGGTTTCAAGCATGT+GGG | 0.646619 | 5_2:+3569333 | Msa0750160:intron |
CCACCCAGTGTTTACTACAT+GGG | 0.649679 | 5_2:-3570423 | None:intergenic |
GGTAGAAGATCCATATTCAG+AGG | 0.657319 | 5_2:+3566229 | Msa0750160:CDS |
GGAAGGAGCCATAACTCAGG+AGG | 0.659506 | 5_2:-3564931 | None:intergenic |
GGTCCCATGTAGTAAACACT+GGG | 0.659996 | 5_2:+3570420 | Msa0750160:CDS |
GATGTGGTGTCACTGCCGGA+TGG | 0.661963 | 5_2:+3565130 | Msa0750160:CDS |
ATAGGACCAGCATAATCACC+AGG | 0.665129 | 5_2:-3564091 | None:intergenic |
TATGGAAGGAGCCATAACTC+AGG | 0.668533 | 5_2:-3564934 | None:intergenic |
AAACTGAAAGTTGCAGAAGG+AGG | 0.670393 | 5_2:+3563755 | Msa0750160:CDS |
GGCAATGAGGAAGACGAAGG+CGG | 0.698699 | 5_2:-3567584 | None:intergenic |
AATGGCAATGAGGAAGACGA+AGG | 0.711714 | 5_2:-3567587 | None:intergenic |
CTACTCATATAACATCCTGG+GGG | 0.753036 | 5_2:+3564766 | Msa0750160:CDS |
GACTGGATTCTTGAGCATGG+TGG | 0.757197 | 5_2:+3564741 | Msa0750160:CDS |
AATTACTCTGTCTATCACTG+GGG | 0.766390 | 5_2:+3564450 | Msa0750160:CDS |
TCACTGCAGAATGAAGATGG+GGG | 0.767587 | 5_2:+3567788 | Msa0750160:intron |
CGTACATTAAACAATCACGT+CGG | 0.788206 | 5_2:+3563791 | Msa0750160:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAAATGAAAAAAAAAAAAAA+TGG | - | chr5_2:3563476-3563495 | None:intergenic | 10.0% |
!!! | TTATACTTCAAATATTTTAT+AGG | - | chr5_2:3567659-3567678 | None:intergenic | 10.0% |
!! | ATCAATTATCATTAAAAAAA+TGG | + | chr5_2:3568158-3568177 | Msa0750160:intron | 10.0% |
!! | TTTCATAAAATAATCATAAT+TGG | + | chr5_2:3569755-3569774 | Msa0750160:intron | 10.0% |
!! | AAATTTAAATTTCTTAAACT+AGG | - | chr5_2:3570139-3570158 | None:intergenic | 10.0% |
!! | CTAGAAATTATAAATAAATA+CGG | - | chr5_2:3571165-3571184 | None:intergenic | 10.0% |
!! | ATATTATTTATTAACAGACA+TGG | + | chr5_2:3564831-3564850 | Msa0750160:intron | 15.0% |
!!! | AATTACATTTTATGCATTAT+AGG | + | chr5_2:3565104-3565123 | Msa0750160:intron | 15.0% |
!! | TTTATTATTAAAAGTTGCAT+CGG | + | chr5_2:3566646-3566665 | Msa0750160:intron | 15.0% |
!!! | ATTTTCAAATTGGTATTTAT+GGG | - | chr5_2:3567131-3567150 | None:intergenic | 15.0% |
!!! | AAACTATAATTTTACAGTTA+AGG | - | chr5_2:3567327-3567346 | None:intergenic | 15.0% |
!! | AGAAAATCTTATTAAAAAAG+TGG | - | chr5_2:3568801-3568820 | None:intergenic | 15.0% |
!!! | TATGATTATTTTATGAAAAG+AGG | - | chr5_2:3569753-3569772 | None:intergenic | 15.0% |
!!! | AGATAACATTTTTTACATTT+TGG | + | chr5_2:3570031-3570050 | Msa0750160:intron | 15.0% |
!! | CTAAAACAAATGAAAAATAT+TGG | - | chr5_2:3570711-3570730 | None:intergenic | 15.0% |
!!! | CAATATTTTTCATTTGTTTT+AGG | + | chr5_2:3570709-3570728 | Msa0750160:intron | 15.0% |
!! | AAAAAAAAAACATGTCTGTT+TGG | - | chr5_2:3564351-3564370 | None:intergenic | 20.0% |
!! | GTTATATGTATTACAGAATA+AGG | + | chr5_2:3564593-3564612 | Msa0750160:intron | 20.0% |
!! | ATATCATAAAAAATAAGGCT+AGG | - | chr5_2:3564815-3564834 | None:intergenic | 20.0% |
!! | TTCTTCCATAACTAAATAAA+AGG | + | chr5_2:3564984-3565003 | Msa0750160:intron | 20.0% |
!!! | AGATTCCTTTTATTTAGTTA+TGG | - | chr5_2:3564992-3565011 | None:intergenic | 20.0% |
!!! | ACTAAATAAAAGGAATCTTT+TGG | + | chr5_2:3564994-3565013 | Msa0750160:intron | 20.0% |
!!! | TTTATTTTCTGATGTAAGTA+AGG | - | chr5_2:3565086-3565105 | None:intergenic | 20.0% |
!! | TTTCTCAAAGATAATATTGT+TGG | - | chr5_2:3565209-3565228 | None:intergenic | 20.0% |
!!! | TTTTAAATAGGTACCATATT+AGG | - | chr5_2:3565630-3565649 | None:intergenic | 20.0% |
!!! | TGGTACCTATTTAAAATAAT+TGG | + | chr5_2:3565634-3565653 | Msa0750160:intron | 20.0% |
!!! | GGTACCTATTTAAAATAATT+GGG | + | chr5_2:3565635-3565654 | Msa0750160:intron | 20.0% |
!!! | GTACCTATTTAAAATAATTG+GGG | + | chr5_2:3565636-3565655 | Msa0750160:intron | 20.0% |
!! | TAATACAATGAACAATTGAA+GGG | - | chr5_2:3566108-3566127 | None:intergenic | 20.0% |
!! | TTAGTTATTATTATTCCCAA+TGG | + | chr5_2:3566173-3566192 | Msa0750160:intron | 20.0% |
!!! | GATTTCTATTTTCATTTTTC+AGG | + | chr5_2:3566882-3566901 | Msa0750160:intron | 20.0% |
!!! | GATTTTCAAATTGGTATTTA+TGG | - | chr5_2:3567132-3567151 | None:intergenic | 20.0% |
!!! | GATTTTATGGATTTTCAAAT+TGG | - | chr5_2:3567141-3567160 | None:intergenic | 20.0% |
!! | AAAATCCATAAAATCATTTG+TGG | + | chr5_2:3567146-3567165 | Msa0750160:intron | 20.0% |
!!! | TATAACCACAAATGATTTTA+TGG | - | chr5_2:3567154-3567173 | None:intergenic | 20.0% |
!! | TAATAGAAAAAGACCAATAA+TGG | + | chr5_2:3567448-3567467 | Msa0750160:intron | 20.0% |
!!! | TCATTTTAATCATCTTTACT+CGG | + | chr5_2:3567520-3567539 | Msa0750160:CDS | 20.0% |
!! | AAACTAAAACAAATGAAAAC+AGG | - | chr5_2:3567879-3567898 | None:intergenic | 20.0% |
!! | TTAATACAAAATACTGATCT+TGG | + | chr5_2:3568435-3568454 | Msa0750160:intron | 20.0% |
!! | AAAATTAAGATTGGAAATGA+TGG | - | chr5_2:3568582-3568601 | None:intergenic | 20.0% |
!! | TAACTATATAGCAAAGAATA+AGG | - | chr5_2:3568615-3568634 | None:intergenic | 20.0% |
!!! | AGCTTGTATTTTTTCAATAA+AGG | - | chr5_2:3568742-3568761 | None:intergenic | 20.0% |
!!! | AGCAATAATTTCCTAATTTT+GGG | - | chr5_2:3569696-3569715 | None:intergenic | 20.0% |
!!! | AAGCAATAATTTCCTAATTT+TGG | - | chr5_2:3569697-3569716 | None:intergenic | 20.0% |
!!! | AAAAGCTGATATTTATTTTG+AGG | - | chr5_2:3569726-3569745 | None:intergenic | 20.0% |
!!! | TCAAAATAAATATCAGCTTT+TGG | + | chr5_2:3569725-3569744 | Msa0750160:intron | 20.0% |
!!! | CAAAATAAATATCAGCTTTT+GGG | + | chr5_2:3569726-3569745 | Msa0750160:intron | 20.0% |
!! | ACATTGATATCTTTCATTTA+GGG | + | chr5_2:3570093-3570112 | Msa0750160:intron | 20.0% |
!! | TTAAGATTATGTATCCAATT+AGG | + | chr5_2:3570160-3570179 | Msa0750160:intron | 20.0% |
!! | AATAAACGAAATCAGTATAA+TGG | - | chr5_2:3570518-3570537 | None:intergenic | 20.0% |
!! | AGTCTGTTTATTTAAATCAA+AGG | + | chr5_2:3570588-3570607 | Msa0750160:intron | 20.0% |
!! | GCAATTTAATTAAATAGCTT+AGG | + | chr5_2:3570619-3570638 | Msa0750160:intron | 20.0% |
!!! | TTTAATAAACATAACTTGTG+GGG | - | chr5_2:3571031-3571050 | None:intergenic | 20.0% |
!!! | CTTTAATAAACATAACTTGT+GGG | - | chr5_2:3571032-3571051 | None:intergenic | 20.0% |
!! | ACTTTAATAAACATAACTTG+TGG | - | chr5_2:3571033-3571052 | None:intergenic | 20.0% |
!! | CAAGTTATGTTTATTAAAGT+TGG | + | chr5_2:3571033-3571052 | Msa0750160:intron | 20.0% |
!!! | TTTCACAATATATTTGTTGA+AGG | + | chr5_2:3571056-3571075 | Msa0750160:intron | 20.0% |
!!! | TTTGTTGAAGGAAAATTTTA+AGG | + | chr5_2:3571068-3571087 | Msa0750160:intron | 20.0% |
!! | TTACGACTAACAAATATATT+TGG | + | chr5_2:3571115-3571134 | Msa0750160:intron | 20.0% |
!!! | AATTTTCTTTTAACTCTCAT+AGG | + | chr5_2:3571201-3571220 | Msa0750160:intron | 20.0% |
!! | TAAATAGAACTCTTAGAAAT+TGG | + | chr5_2:3571260-3571279 | Msa0750160:intron | 20.0% |
!! | AAATAGAACTCTTAGAAATT+GGG | + | chr5_2:3571261-3571280 | Msa0750160:intron | 20.0% |
!! | TATGATACCATCTTATAATT+TGG | + | chr5_2:3571477-3571496 | Msa0750160:intron | 20.0% |
!! | ATGATACCATCTTATAATTT+GGG | + | chr5_2:3571478-3571497 | Msa0750160:intron | 20.0% |
!! | TAAATAGATTTATGTGATGT+TGG | - | chr5_2:3572549-3572568 | None:intergenic | 20.0% |
!! | GAATAATATAATGTATGAGA+GGG | + | chr5_2:3572681-3572700 | Msa0750160:intron | 20.0% |
!! | AATAATATAATGTATGAGAG+GGG | + | chr5_2:3572682-3572701 | Msa0750160:intron | 20.0% |
!!! | GATTTGATTTGATTTGAAAG+AGG | - | chr5_2:3563504-3563523 | None:intergenic | 25.0% |
! | ATTTAGATGTTTATCCAAAC+TGG | + | chr5_2:3564223-3564242 | Msa0750160:intron | 25.0% |
!! | TAAGCTGTAAGTTAGTTTAT+TGG | + | chr5_2:3564320-3564339 | Msa0750160:intron | 25.0% |
!! | ATTGAGATTTTCAATTGAAC+AGG | + | chr5_2:3564426-3564445 | Msa0750160:intron | 25.0% |
! | TTCTTACCTGATGATTATAA+AGG | - | chr5_2:3564525-3564544 | None:intergenic | 25.0% |
!! | CTATCTCAAGTTTTTCTAAT+TGG | + | chr5_2:3564571-3564590 | Msa0750160:intron | 25.0% |
! | TATGTATTACAGAATAAGGA+TGG | + | chr5_2:3564597-3564616 | Msa0750160:intron | 25.0% |
!!! | TTTATTTCTAATGTCGTTGT+TGG | + | chr5_2:3564866-3564885 | Msa0750160:intron | 25.0% |
!! | ACATTTTATGCATTATAGGA+AGG | + | chr5_2:3565108-3565127 | Msa0750160:intron | 25.0% |
!! | TTCATTACAACGTTTTTCAT+AGG | - | chr5_2:3565319-3565338 | None:intergenic | 25.0% |
! | GTAATGAATATTGTTTCATC+TGG | + | chr5_2:3565331-3565350 | Msa0750160:intron | 25.0% |
! | AACAAAGTAATACACTAGAA+CGG | - | chr5_2:3565391-3565410 | None:intergenic | 25.0% |
! | CCTATAATAAGTTATAGTGA+TGG | - | chr5_2:3565514-3565533 | None:intergenic | 25.0% |
! | CCATCACTATAACTTATTAT+AGG | + | chr5_2:3565511-3565530 | Msa0750160:intron | 25.0% |
!!! | ATGCCCCAATTATTTTAAAT+AGG | - | chr5_2:3565642-3565661 | None:intergenic | 25.0% |
!! | TTTTCTCTCAATTTTTTGCA+AGG | - | chr5_2:3565970-3565989 | None:intergenic | 25.0% |
! | TTGCAAAAAATTGAGAGAAA+AGG | + | chr5_2:3565969-3565988 | Msa0750160:CDS | 25.0% |
! | AATACTCGTTATATTTGCAT+AGG | + | chr5_2:3566033-3566052 | Msa0750160:CDS | 25.0% |
!! | TCAAGAATTACCTTATTTAC+AGG | - | chr5_2:3566060-3566079 | None:intergenic | 25.0% |
! | TAAATAAGGTAATTCTTGAG+AGG | + | chr5_2:3566061-3566080 | Msa0750160:intron | 25.0% |
! | GTAATACAATGAACAATTGA+AGG | - | chr5_2:3566109-3566128 | None:intergenic | 25.0% |
! | TATTCCCAATGGTTATTATT+AGG | + | chr5_2:3566184-3566203 | Msa0750160:intron | 25.0% |
! | ACTAACCTAATTGAAGAATT+TGG | + | chr5_2:3566567-3566586 | Msa0750160:CDS | 25.0% |
! | TACATTCATTAAGAATTCAC+AGG | + | chr5_2:3566611-3566630 | Msa0750160:CDS | 25.0% |
! | AATCTCTTCTCTTTCTTAAA+AGG | + | chr5_2:3566687-3566706 | Msa0750160:intron | 25.0% |
! | AATAATTACTTTCAGTCCTT+CGG | - | chr5_2:3566821-3566840 | None:intergenic | 25.0% |
! | AAATGTCATTATCTCATTAC+AGG | + | chr5_2:3566981-3567000 | Msa0750160:CDS | 25.0% |
!! | ATAATCTGATTTGAATCATG+AGG | - | chr5_2:3567017-3567036 | None:intergenic | 25.0% |
!!! | ATTAAAAAGTATTGCAAGCA+AGG | - | chr5_2:3567432-3567451 | None:intergenic | 25.0% |
! | ATGATTAAAATGACGATGAT+GGG | - | chr5_2:3567513-3567532 | None:intergenic | 25.0% |
!!! | TTTTTATACTGACTTTGAAC+TGG | - | chr5_2:3567618-3567637 | None:intergenic | 25.0% |
!! | AATTGATAATCATCTCAAGT+TGG | - | chr5_2:3567719-3567738 | None:intergenic | 25.0% |
! | CAAACTTTAAGTGAAATCAA+AGG | - | chr5_2:3568116-3568135 | None:intergenic | 25.0% |
!! | CTTTGATTTCACTTAAAGTT+TGG | + | chr5_2:3568114-3568133 | Msa0750160:intron | 25.0% |
! | AAAATGGAAATGATCTAACT+AGG | + | chr5_2:3568174-3568193 | Msa0750160:intron | 25.0% |
! | TCAATGAATAAAAGTAGTTG+AGG | - | chr5_2:3568226-3568245 | None:intergenic | 25.0% |
!!! | CTTTTATTCATTGATTTGTC+AGG | + | chr5_2:3568232-3568251 | Msa0750160:intron | 25.0% |
!! | TTCTTTGCTATATAGTTATG+TGG | + | chr5_2:3568617-3568636 | Msa0750160:intron | 25.0% |
! | AGTGAGATTGACATTAAAAA+CGG | - | chr5_2:3569144-3569163 | None:intergenic | 25.0% |
! | AAAAACATGCTTGTTTGAAT+AGG | - | chr5_2:3569208-3569227 | None:intergenic | 25.0% |
! | AAAAACATGCTTGTTTGAAT+AGG | - | chr5_2:3569208-3569227 | None:intergenic | 25.0% |
! | AGAGTATGCAAAATTAAGAA+TGG | + | chr5_2:3569362-3569381 | Msa0750160:CDS | 25.0% |
!!! | TCAAATAATGGACTCTTTAT+AGG | - | chr5_2:3569440-3569459 | None:intergenic | 25.0% |
! | TTGCATCAAATGAAAAGATT+TGG | + | chr5_2:3569586-3569605 | Msa0750160:intron | 25.0% |
!!! | CTGATATTTATTTTGAGGAA+CGG | - | chr5_2:3569721-3569740 | None:intergenic | 25.0% |
! | ATCAATATCATCCATTTAGT+AGG | - | chr5_2:3569891-3569910 | None:intergenic | 25.0% |
! | GACATTGATATCTTTCATTT+AGG | + | chr5_2:3570092-3570111 | Msa0750160:intron | 25.0% |
! | AATTCTAGACAAATCCTAAT+TGG | - | chr5_2:3570177-3570196 | None:intergenic | 25.0% |
! | GTAAATTGTAATGTCTCATA+AGG | + | chr5_2:3570830-3570849 | Msa0750160:intron | 25.0% |
!!! | GTTGTTGTATTTATTTCTGA+TGG | - | chr5_2:3571744-3571763 | None:intergenic | 25.0% |
!!! | TCATGTTTTTGATAAAACAC+TGG | - | chr5_2:3571817-3571836 | None:intergenic | 25.0% |
!!! | ATGTTTTTGATAGAACACTA+TGG | - | chr5_2:3571851-3571870 | None:intergenic | 25.0% |
! | AAAAAAAAAGAACGAGTAAG+TGG | + | chr5_2:3572003-3572022 | Msa0750160:intron | 25.0% |
! | AAAAAAAAGAACGAGTAAGT+GGG | + | chr5_2:3572004-3572023 | Msa0750160:intron | 25.0% |
! | AATATAAAATCCTCCTCATT+TGG | + | chr5_2:3572078-3572097 | Msa0750160:intron | 25.0% |
! | ATATAAAATCCTCCTCATTT+GGG | + | chr5_2:3572079-3572098 | Msa0750160:intron | 25.0% |
! | GGGAACTAAAAAAATTGTAT+CGG | + | chr5_2:3572101-3572120 | Msa0750160:intron | 25.0% |
! | AACTAAAAAAATTGTATCGG+AGG | + | chr5_2:3572104-3572123 | Msa0750160:intron | 25.0% |
!!! | CTCTTTTTTTAAGAACAAAG+AGG | + | chr5_2:3572437-3572456 | Msa0750160:intron | 25.0% |
! | TAGATTGAGCATAAATTAAG+AGG | + | chr5_2:3572520-3572539 | Msa0750160:intron | 25.0% |
! | ATATCTGTTACGAAAATTGA+TGG | + | chr5_2:3572602-3572621 | Msa0750160:intron | 25.0% |
! | GGGTTAATTAAACTTATACA+TGG | + | chr5_2:3572638-3572657 | Msa0750160:intron | 25.0% |
! | GGAATAATATAATGTATGAG+AGG | + | chr5_2:3572680-3572699 | Msa0750160:intron | 25.0% |
! | AATTCACACCTTTAGTAATT+GGG | - | chr5_2:3572750-3572769 | None:intergenic | 25.0% |
! | TAATTCACACCTTTAGTAAT+TGG | - | chr5_2:3572751-3572770 | None:intergenic | 25.0% |
!! | ATTACTAAAGGTGTGAATTA+AGG | + | chr5_2:3572751-3572770 | Msa0750160:intron | 25.0% |
!! | TTACTAAAGGTGTGAATTAA+GGG | + | chr5_2:3572752-3572771 | Msa0750160:intron | 25.0% |
! | CAAAACCTATAGAAGAATAA+GGG | - | chr5_2:3572789-3572808 | None:intergenic | 25.0% |
!!! | AAGCAATTTTGAAACAACCA+AGG | + | chr5_2:3563573-3563592 | Msa0750160:five_prime_UTR | 30.0% |
AGAGAGAGAAAAGAAAAATG+TGG | + | chr5_2:3563732-3563751 | Msa0750160:exon | 30.0% | |
!! | ATTGCGAAAATTTTGACGAA+CGG | - | chr5_2:3563879-3563898 | None:intergenic | 30.0% |
TGTGACAACAACATTAAGAA+GGG | + | chr5_2:3564024-3564043 | Msa0750160:CDS | 30.0% | |
ATAAACATTTAGGTCCAGTT+TGG | - | chr5_2:3564240-3564259 | None:intergenic | 30.0% | |
TTGCGAGCTTATAAACATTT+AGG | - | chr5_2:3564250-3564269 | None:intergenic | 30.0% | |
! | ATGACTAAAAAAGGCTTGTT+TGG | - | chr5_2:3564291-3564310 | None:intergenic | 30.0% |
TAACCTCACATGACTAAAAA+AGG | - | chr5_2:3564300-3564319 | None:intergenic | 30.0% | |
AGTCCTTATTGTTATCAATG+AGG | - | chr5_2:3564395-3564414 | None:intergenic | 30.0% | |
TAATTACTCTGTCTATCACT+GGG | + | chr5_2:3564449-3564468 | Msa0750160:CDS | 30.0% | |
TCGTTACCTTTATAATCATC+AGG | + | chr5_2:3564516-3564535 | Msa0750160:CDS | 30.0% | |
! | AGAATCCCATAGATTAGTTA+GGG | - | chr5_2:3564553-3564572 | None:intergenic | 30.0% |
! | TAGAATCCCATAGATTAGTT+AGG | - | chr5_2:3564554-3564573 | None:intergenic | 30.0% |
TATTACAGAATAAGGATGGT+GGG | + | chr5_2:3564601-3564620 | Msa0750160:intron | 30.0% | |
!! | TATGTTACTCTAAGATTGCT+TGG | + | chr5_2:3564675-3564694 | Msa0750160:CDS | 30.0% |
TTGAAAAACTAGCACTTAAC+TGG | + | chr5_2:3565030-3565049 | Msa0750160:intron | 30.0% | |
! | ATTTTCTGATGTAAGTAAGG+AGG | - | chr5_2:3565083-3565102 | None:intergenic | 30.0% |
GATAATATTGTTGGTGTGAT+TGG | - | chr5_2:3565200-3565219 | None:intergenic | 30.0% | |
TAACCTTTGCACATAAATTG+CGG | - | chr5_2:3565277-3565296 | None:intergenic | 30.0% | |
TAGAAATCCTAGTAATGAGT+TGG | - | chr5_2:3565428-3565447 | None:intergenic | 30.0% | |
GTGGAACAATATACCTAATA+TGG | + | chr5_2:3565614-3565633 | Msa0750160:intron | 30.0% | |
! | ACTTAATAGCTCAAGCTTTT+GGG | - | chr5_2:3565728-3565747 | None:intergenic | 30.0% |
! | TACTTAATAGCTCAAGCTTT+TGG | - | chr5_2:3565729-3565748 | None:intergenic | 30.0% |
ATTTCACACCTCTAACAAAT+AGG | + | chr5_2:3565763-3565782 | Msa0750160:intron | 30.0% | |
AGTTAAGTGAGAGTTACAAA+AGG | + | chr5_2:3565836-3565855 | Msa0750160:intron | 30.0% | |
! | TTGAGCCTATTTTCATGAAT+TGG | + | chr5_2:3565944-3565963 | Msa0750160:CDS | 30.0% |
AGCACCTAATAATAACCATT+GGG | - | chr5_2:3566191-3566210 | None:intergenic | 30.0% | |
TAGCACCTAATAATAACCAT+TGG | - | chr5_2:3566192-3566211 | None:intergenic | 30.0% | |
! | GTTGTCTTGTTATGATTATG+TGG | + | chr5_2:3566393-3566412 | Msa0750160:intron | 30.0% |
TTGGACCAAATTCTTCAATT+AGG | - | chr5_2:3566575-3566594 | None:intergenic | 30.0% | |
TTAAGAAAGAGAAGAGATTC+TGG | - | chr5_2:3566686-3566705 | None:intergenic | 30.0% | |
CCATGATCTTTAGTTGAAAA+GGG | - | chr5_2:3566775-3566794 | None:intergenic | 30.0% | |
TCCATGATCTTTAGTTGAAA+AGG | - | chr5_2:3566776-3566795 | None:intergenic | 30.0% | |
TTTCAACTAAAGATCATGGA+TGG | + | chr5_2:3566776-3566795 | Msa0750160:CDS | 30.0% | |
GGACTGAAAGTAATTATTGA+TGG | + | chr5_2:3566823-3566842 | Msa0750160:intron | 30.0% | |
! | GTGCAATTTTAGATAGCAAT+AGG | - | chr5_2:3566912-3566931 | None:intergenic | 30.0% |
TATAATCTCTTTGCATCCAA+TGG | - | chr5_2:3566952-3566971 | None:intergenic | 30.0% | |
TAGTCGCAGCAAATAAATTA+TGG | + | chr5_2:3567045-3567064 | Msa0750160:intron | 30.0% | |
TGATTTCTGTTAAGTAGGAA+CGG | - | chr5_2:3567093-3567112 | None:intergenic | 30.0% | |
TTCCTACTTAACAGAAATCA+CGG | + | chr5_2:3567093-3567112 | Msa0750160:intron | 30.0% | |
! | TCATGACATATCTAGCTTAA+AGG | - | chr5_2:3567183-3567202 | None:intergenic | 30.0% |
! | GAAAAGCTAAATCGTTTTCT+TGG | - | chr5_2:3567410-3567429 | None:intergenic | 30.0% |
!!! | GACCCAACTCTATTTTTTAA+GGG | + | chr5_2:3567470-3567489 | Msa0750160:intron | 30.0% |
GACCCTTAAAAAATAGAGTT+GGG | - | chr5_2:3567475-3567494 | None:intergenic | 30.0% | |
AGACCCTTAAAAAATAGAGT+TGG | - | chr5_2:3567476-3567495 | None:intergenic | 30.0% | |
TGATTAAAATGACGATGATG+GGG | - | chr5_2:3567512-3567531 | None:intergenic | 30.0% | |
GATGATTAAAATGACGATGA+TGG | - | chr5_2:3567514-3567533 | None:intergenic | 30.0% | |
GACTTTGAACTGGAAAAAAA+TGG | - | chr5_2:3567608-3567627 | None:intergenic | 30.0% | |
!!! | TTGTCAAGCAAAGTTTTGAA+TGG | + | chr5_2:3568255-3568274 | Msa0750160:intron | 30.0% |
TAACTCTTACGTTTCAGATT+AGG | + | chr5_2:3568358-3568377 | Msa0750160:intron | 30.0% | |
AACTCTTACGTTTCAGATTA+GGG | + | chr5_2:3568359-3568378 | Msa0750160:intron | 30.0% | |
! | TTAAGATTGGAAATGATGGA+GGG | - | chr5_2:3568578-3568597 | None:intergenic | 30.0% |
ATTAAGATTGGAAATGATGG+AGG | - | chr5_2:3568579-3568598 | None:intergenic | 30.0% | |
GAAAAAATACAAGCTTCAGA+TGG | + | chr5_2:3568747-3568766 | Msa0750160:CDS | 30.0% | |
TAAAAAAGTGGTTTCCCATA+AGG | - | chr5_2:3568789-3568808 | None:intergenic | 30.0% | |
GTTTGAATAGGTTAACAAAC+AGG | - | chr5_2:3569196-3569215 | None:intergenic | 30.0% | |
AGCAAGGCAAATTCAAATAA+TGG | - | chr5_2:3569452-3569471 | None:intergenic | 30.0% | |
TTATTTGAATTTGCCTTGCT+TGG | + | chr5_2:3569452-3569471 | Msa0750160:intron | 30.0% | |
ACTTATAGATGACTACCAAA+AGG | - | chr5_2:3569482-3569501 | None:intergenic | 30.0% | |
!! | TTTTGGTAGTCATCTATAAG+TGG | + | chr5_2:3569481-3569500 | Msa0750160:intron | 30.0% |
! | TTTGGTAGTCATCTATAAGT+GGG | + | chr5_2:3569482-3569501 | Msa0750160:intron | 30.0% |
TTCTTAATCCCAATACCATT+GGG | + | chr5_2:3569544-3569563 | Msa0750160:intron | 30.0% | |
! | CTTTTCATTTGATGCAAACT+AGG | - | chr5_2:3569583-3569602 | None:intergenic | 30.0% |
AATGAAAAGATTTGGCATGA+AGG | + | chr5_2:3569594-3569613 | Msa0750160:intron | 30.0% | |
ATGTTTAGTCTCCCAAAATT+AGG | + | chr5_2:3569682-3569701 | Msa0750160:intron | 30.0% | |
!! | AAAGCTTTTAGGTGAGTTTA+CGG | - | chr5_2:3569841-3569860 | None:intergenic | 30.0% |
GATGATATTGATGAGTATGT+TGG | + | chr5_2:3569899-3569918 | Msa0750160:intron | 30.0% | |
!! | AGTTGATAGTTGTGTGATTT+AGG | + | chr5_2:3570070-3570089 | Msa0750160:intron | 30.0% |
TGTTCAGGTGTATTCAAATT+TGG | + | chr5_2:3570388-3570407 | Msa0750160:intron | 30.0% | |
ATTCAAATTTGGAAAGCAAC+AGG | + | chr5_2:3570399-3570418 | Msa0750160:CDS | 30.0% | |
!!! | AGCAAACTTTGCAACTTTTT+TGG | + | chr5_2:3570482-3570501 | Msa0750160:intron | 30.0% |
AATTGAAAATCCTTCATGAG+AGG | + | chr5_2:3570752-3570771 | Msa0750160:intron | 30.0% | |
AAACTATCATCCTCTATGAT+TGG | + | chr5_2:3570855-3570874 | Msa0750160:intron | 30.0% | |
ATAAGTAAAACCAGATGGAA+GGG | - | chr5_2:3571001-3571020 | None:intergenic | 30.0% | |
TATAAGTAAAACCAGATGGA+AGG | - | chr5_2:3571002-3571021 | None:intergenic | 30.0% | |
AGGTTATAAGTAAAACCAGA+TGG | - | chr5_2:3571006-3571025 | None:intergenic | 30.0% | |
AAAATAGAGCAAAACAGAGT+AGG | + | chr5_2:3571237-3571256 | Msa0750160:intron | 30.0% | |
AACATGTATCTATAAGTGGT+TGG | - | chr5_2:3571335-3571354 | None:intergenic | 30.0% | |
TGTGTTAAAAAGTCTCACAT+TGG | - | chr5_2:3571373-3571392 | None:intergenic | 30.0% | |
TACCATCTTATAATTTGGGT+TGG | + | chr5_2:3571482-3571501 | Msa0750160:intron | 30.0% | |
TTCTCAACAAAAACCATTGA+AGG | + | chr5_2:3571589-3571608 | Msa0750160:intron | 30.0% | |
TCTCAACAAAAACCATTGAA+GGG | + | chr5_2:3571590-3571609 | Msa0750160:intron | 30.0% | |
! | AGGTTTTTGATAGAACACTA+TGG | - | chr5_2:3571887-3571906 | None:intergenic | 30.0% |
AAAGCCTAAGAGAAACTATT+AGG | - | chr5_2:3571944-3571963 | None:intergenic | 30.0% | |
TATAAAATCCTCCTCATTTG+GGG | + | chr5_2:3572080-3572099 | Msa0750160:intron | 30.0% | |
TAAAAAAATTGTATCGGAGG+AGG | + | chr5_2:3572107-3572126 | Msa0750160:intron | 30.0% | |
AAAAAAATTGTATCGGAGGA+GGG | + | chr5_2:3572108-3572127 | Msa0750160:intron | 30.0% | |
TTTGAGGGGACAAAAATATA+GGG | - | chr5_2:3572285-3572304 | None:intergenic | 30.0% | |
AAAACTATAAGGCAGTGTTT+GGG | - | chr5_2:3572335-3572354 | None:intergenic | 30.0% | |
AAAAACTATAAGGCAGTGTT+TGG | - | chr5_2:3572336-3572355 | None:intergenic | 30.0% | |
GTAGACCTAGAAAAACTATA+AGG | - | chr5_2:3572346-3572365 | None:intergenic | 30.0% | |
!! | CCTTCATTTATTTCTGATGT+AGG | - | chr5_2:3572370-3572389 | None:intergenic | 30.0% |
CCTACATCAGAAATAAATGA+AGG | + | chr5_2:3572367-3572386 | Msa0750160:intron | 30.0% | |
! | TGGCTTTTATTGATGTAGAA+AGG | + | chr5_2:3572658-3572677 | Msa0750160:intron | 30.0% |
! | GGCTTTTATTGATGTAGAAA+GGG | + | chr5_2:3572659-3572678 | Msa0750160:intron | 30.0% |
CCAAAACCTATAGAAGAATA+AGG | - | chr5_2:3572790-3572809 | None:intergenic | 30.0% | |
! | CCTTATTCTTCTATAGGTTT+TGG | + | chr5_2:3572787-3572806 | Msa0750160:intron | 30.0% |
! | TGGATTTGTTTACTGAACAT+AGG | + | chr5_2:3572807-3572826 | Msa0750160:intron | 30.0% |
! | TGAGATTAGTTCACTAACCT+TGG | - | chr5_2:3563593-3563612 | None:intergenic | 35.0% |
GAGAATTTAGCATAAGTGAG+TGG | - | chr5_2:3563654-3563673 | None:intergenic | 35.0% | |
TTGTTTAATGTACGAAGCCA+TGG | - | chr5_2:3563785-3563804 | None:intergenic | 35.0% | |
CGTACATTAAACAATCACGT+CGG | + | chr5_2:3563791-3563810 | Msa0750160:CDS | 35.0% | |
ACATCTTTCACTCTCACTTT+CGG | - | chr5_2:3563983-3564002 | None:intergenic | 35.0% | |
GTGTGACAACAACATTAAGA+AGG | + | chr5_2:3564023-3564042 | Msa0750160:CDS | 35.0% | |
! | CTAAAAAAGGCTTGTTTGGT+TGG | - | chr5_2:3564287-3564306 | None:intergenic | 35.0% |
!!! | AAGCCTTTTTTAGTCATGTG+AGG | + | chr5_2:3564294-3564313 | Msa0750160:intron | 35.0% |
TTATTGTTATCAATGAGGCG+TGG | - | chr5_2:3564390-3564409 | None:intergenic | 35.0% | |
! | ACGCCTCATTGATAACAATA+AGG | + | chr5_2:3564389-3564408 | Msa0750160:intron | 35.0% |
GTAATTACTCTGTCTATCAC+TGG | + | chr5_2:3564448-3564467 | Msa0750160:CDS | 35.0% | |
AATTACTCTGTCTATCACTG+GGG | + | chr5_2:3564450-3564469 | Msa0750160:CDS | 35.0% | |
ATTTCCCCCTAACTAATCTA+TGG | + | chr5_2:3564544-3564563 | Msa0750160:intron | 35.0% | |
TTTCCCCCTAACTAATCTAT+GGG | + | chr5_2:3564545-3564564 | Msa0750160:intron | 35.0% | |
! | AATCCCATAGATTAGTTAGG+GGG | - | chr5_2:3564551-3564570 | None:intergenic | 35.0% |
! | GAATCCCATAGATTAGTTAG+GGG | - | chr5_2:3564552-3564571 | None:intergenic | 35.0% |
GTATTACAGAATAAGGATGG+TGG | + | chr5_2:3564600-3564619 | Msa0750160:intron | 35.0% | |
ACTCAAAACAGAACCAAACA+TGG | - | chr5_2:3564655-3564674 | None:intergenic | 35.0% | |
TGCTACTCATATAACATCCT+GGG | + | chr5_2:3564764-3564783 | Msa0750160:CDS | 35.0% | |
TATTAACAGACATGGCATTG+TGG | + | chr5_2:3564839-3564858 | Msa0750160:intron | 35.0% | |
TTTCTAATGTCGTTGTTGGT+AGG | + | chr5_2:3564870-3564889 | Msa0750160:intron | 35.0% | |
GAAATGGAAGAATGTATGGA+AGG | - | chr5_2:3564951-3564970 | None:intergenic | 35.0% | |
GGATGAAATGGAAGAATGTA+TGG | - | chr5_2:3564955-3564974 | None:intergenic | 35.0% | |
TACATTCTTCCATTTCATCC+AGG | + | chr5_2:3564955-3564974 | Msa0750160:CDS | 35.0% | |
TGTAAGTAAGGAGGAATGAT+AGG | - | chr5_2:3565074-3565093 | None:intergenic | 35.0% | |
TATGCATTATAGGAAGGATG+TGG | + | chr5_2:3565114-3565133 | Msa0750160:intron | 35.0% | |
AACCTTTGCACATAAATTGC+GGG | - | chr5_2:3565276-3565295 | None:intergenic | 35.0% | |
TCCAAAACCAACTCATTACT+AGG | + | chr5_2:3565418-3565437 | Msa0750160:intron | 35.0% | |
!!! | TCCTAGTAATGAGTTGGTTT+TGG | - | chr5_2:3565422-3565441 | None:intergenic | 35.0% |
TTCATGATTAAAGTGGCGAT+CGG | + | chr5_2:3565661-3565680 | Msa0750160:intron | 35.0% | |
! | TGACAAGTCCTATTTGTTAG+AGG | - | chr5_2:3565774-3565793 | None:intergenic | 35.0% |
!!! | GATTACCTTTGTTTTTGTGC+AGG | + | chr5_2:3565858-3565877 | Msa0750160:intron | 35.0% |
AAAGAATATCTTGCACGAGT+GGG | - | chr5_2:3565903-3565922 | None:intergenic | 35.0% | |
ACTCGTGCAAGATATTCTTT+GGG | + | chr5_2:3565903-3565922 | Msa0750160:CDS | 35.0% | |
CAAGGCCAATTCATGAAAAT+AGG | - | chr5_2:3565952-3565971 | None:intergenic | 35.0% | |
TTGCATAGGTCCTGTAAATA+AGG | + | chr5_2:3566047-3566066 | Msa0750160:CDS | 35.0% | |
ATAAGGTAATTCTTGAGAGG+TGG | + | chr5_2:3566064-3566083 | Msa0750160:intron | 35.0% | |
! | ATTACTTCCACTCTTTGAGA+AGG | + | chr5_2:3566124-3566143 | Msa0750160:intron | 35.0% |
AACTTGAAAGCCTCTGAATA+TGG | - | chr5_2:3566242-3566261 | None:intergenic | 35.0% | |
CATAGATAATCATGGATCCT+TGG | - | chr5_2:3566272-3566291 | None:intergenic | 35.0% | |
CAAGGATCCATGATTATCTA+TGG | + | chr5_2:3566270-3566289 | Msa0750160:CDS | 35.0% | |
CAGCAATCCATAGATAATCA+TGG | - | chr5_2:3566280-3566299 | None:intergenic | 35.0% | |
! | TATCTATGGATTGCTGAAGA+TGG | + | chr5_2:3566284-3566303 | Msa0750160:CDS | 35.0% |
! | CATTCCCAATTTTTGTTGCA+GGG | + | chr5_2:3566489-3566508 | Msa0750160:intron | 35.0% |
! | ATTTGGTCCAACTCTAAGAA+AGG | + | chr5_2:3566584-3566603 | Msa0750160:CDS | 35.0% |
TACCATTTACTAAGATCACC+AGG | - | chr5_2:3566727-3566746 | None:intergenic | 35.0% | |
!!! | AAGCACCTTTTGAAATGTGA+CGG | - | chr5_2:3566750-3566769 | None:intergenic | 35.0% |
! | CCCTTTTCAACTAAAGATCA+TGG | + | chr5_2:3566772-3566791 | Msa0750160:CDS | 35.0% |
AAAATTGCACCTGAGATTGT+TGG | + | chr5_2:3566922-3566941 | Msa0750160:CDS | 35.0% | |
AACCGTGATTTCTGTTAAGT+AGG | - | chr5_2:3567098-3567117 | None:intergenic | 35.0% | |
TTTGGTTAAACAGGGTAGTT+TGG | - | chr5_2:3567215-3567234 | None:intergenic | 35.0% | |
CCTCTGAATTTGGTTAAACA+GGG | - | chr5_2:3567223-3567242 | None:intergenic | 35.0% | |
TCCTCTGAATTTGGTTAAAC+AGG | - | chr5_2:3567224-3567243 | None:intergenic | 35.0% | |
!!! | GATGCTTTTTCCTCTGAATT+TGG | - | chr5_2:3567233-3567252 | None:intergenic | 35.0% |
AAAGAAGAGTGAGGATCAAT+GGG | - | chr5_2:3567281-3567300 | None:intergenic | 35.0% | |
AAAAGAAGAGTGAGGATCAA+TGG | - | chr5_2:3567282-3567301 | None:intergenic | 35.0% | |
GTCATTGAAAAAGAAGAGTG+AGG | - | chr5_2:3567290-3567309 | None:intergenic | 35.0% | |
! | TTTTACAGTTAAGGAGCGAT+GGG | - | chr5_2:3567318-3567337 | None:intergenic | 35.0% |
! | ATTTTACAGTTAAGGAGCGA+TGG | - | chr5_2:3567319-3567338 | None:intergenic | 35.0% |
AATAGAGTTGGGTCCATTAT+TGG | - | chr5_2:3567464-3567483 | None:intergenic | 35.0% | |
!!! | GGACCCAACTCTATTTTTTA+AGG | + | chr5_2:3567469-3567488 | Msa0750160:intron | 35.0% |
ACTGGAAAAAAATGGCAATG+AGG | - | chr5_2:3567600-3567619 | None:intergenic | 35.0% | |
AATCACTGCAGAATGAAGAT+GGG | + | chr5_2:3567786-3567805 | Msa0750160:intron | 35.0% | |
TTGAAATGTGAAGCATGTGA+TGG | + | chr5_2:3567906-3567925 | Msa0750160:intron | 35.0% | |
! | TTTCAGATTAGGGTTCTAGT+TGG | + | chr5_2:3568369-3568388 | Msa0750160:intron | 35.0% |
CAAAAACACCTCAAATTCTC+AGG | - | chr5_2:3568396-3568415 | None:intergenic | 35.0% | |
CGTAAGCTATCAAATACTTG+TGG | + | chr5_2:3568525-3568544 | Msa0750160:intron | 35.0% | |
! | TAAGATTGGAAATGATGGAG+GGG | - | chr5_2:3568577-3568596 | None:intergenic | 35.0% |
! | TTCAGGCTTTGTCAACATTT+AGG | + | chr5_2:3568658-3568677 | Msa0750160:CDS | 35.0% |
CATTTAGGAAACTATATCCC+AGG | + | chr5_2:3568673-3568692 | Msa0750160:CDS | 35.0% | |
TAGAGAAAACTTGTGATGCA+GGG | - | chr5_2:3568852-3568871 | None:intergenic | 35.0% | |
TGTCAGCTTCAATTTCAGAA+TGG | + | chr5_2:3568882-3568901 | Msa0750160:intron | 35.0% | |
GCAAAAAGTCACAAGCTTTA+CGG | - | chr5_2:3569052-3569071 | None:intergenic | 35.0% | |
TTGGAACATGTATGCTCTTA+TGG | + | chr5_2:3569302-3569321 | Msa0750160:intron | 35.0% | |
! | TTGGTAGTCATCTATAAGTG+GGG | + | chr5_2:3569483-3569502 | Msa0750160:intron | 35.0% |
TCAAAACTCTTCTTGAGCAA+TGG | + | chr5_2:3569516-3569535 | Msa0750160:intron | 35.0% | |
! | TGGTATTGGGATTAAGAACT+AGG | - | chr5_2:3569542-3569561 | None:intergenic | 35.0% |
GTTCTTAATCCCAATACCAT+TGG | + | chr5_2:3569543-3569562 | Msa0750160:intron | 35.0% | |
ACTATGAAACTCAACTGCAT+AGG | - | chr5_2:3569652-3569671 | None:intergenic | 35.0% | |
ATGCAGTTGAGTTTCATAGT+TGG | + | chr5_2:3569652-3569671 | Msa0750160:intron | 35.0% | |
TGCAGTTGAGTTTCATAGTT+GGG | + | chr5_2:3569653-3569672 | Msa0750160:intron | 35.0% | |
! | CAACTATGCTGAAAGCTTTT+AGG | - | chr5_2:3569852-3569871 | None:intergenic | 35.0% |
ATTTAGTAGGAGAGATATGG+TGG | - | chr5_2:3569878-3569897 | None:intergenic | 35.0% | |
ACCATATCTCTCCTACTAAA+TGG | + | chr5_2:3569877-3569896 | Msa0750160:intron | 35.0% | |
TCCATTTAGTAGGAGAGATA+TGG | - | chr5_2:3569881-3569900 | None:intergenic | 35.0% | |
TATACTAGGTAGCAACGAAA+TGG | - | chr5_2:3569938-3569957 | None:intergenic | 35.0% | |
TTCGTTGCTACCTAGTATAA+TGG | + | chr5_2:3569939-3569958 | Msa0750160:intron | 35.0% | |
ATCAATGTAGCATTTGCACA+GGG | - | chr5_2:3569973-3569992 | None:intergenic | 35.0% | |
TGCAAATGCTACATTGATCA+TGG | + | chr5_2:3569975-3569994 | Msa0750160:intron | 35.0% | |
AAATGCTACATTGATCATGG+AGG | + | chr5_2:3569978-3569997 | Msa0750160:intron | 35.0% | |
! | ATACTTTTGCCAACTAGATC+TGG | + | chr5_2:3570001-3570020 | Msa0750160:intron | 35.0% |
TGCTTGCAGAAGTTTCATTT+AGG | + | chr5_2:3570246-3570265 | Msa0750160:intron | 35.0% | |
AGAAGTTTCATTTAGGCTGT+TGG | + | chr5_2:3570253-3570272 | Msa0750160:intron | 35.0% | |
ACGAAATCAGTATAATGGCA+TGG | - | chr5_2:3570513-3570532 | None:intergenic | 35.0% | |
GAATTTATTTAGCCAGAGAC+AGG | - | chr5_2:3570649-3570668 | None:intergenic | 35.0% | |
TTGAATGCTGATATCAGATC+TGG | - | chr5_2:3570914-3570933 | None:intergenic | 35.0% | |
TAAGTAAAACCAGATGGAAG+GGG | - | chr5_2:3571000-3571019 | None:intergenic | 35.0% | |
GAACTCTTAGAAATTGGGTT+AGG | + | chr5_2:3571266-3571285 | Msa0750160:intron | 35.0% | |
CCTGAACATGTATCTATAAG+TGG | - | chr5_2:3571339-3571358 | None:intergenic | 35.0% | |
CCACTTATAGATACATGTTC+AGG | + | chr5_2:3571336-3571355 | Msa0750160:intron | 35.0% | |
GACCAACCCAAATTATAAGA+TGG | - | chr5_2:3571487-3571506 | None:intergenic | 35.0% | |
AACACGTGTTAATAAGTGGT+GGG | - | chr5_2:3571551-3571570 | None:intergenic | 35.0% | |
GATGAACACGTGTTAATAAG+TGG | - | chr5_2:3571555-3571574 | None:intergenic | 35.0% | |
CTCAACAAAAACCATTGAAG+GGG | + | chr5_2:3571591-3571610 | Msa0750160:intron | 35.0% | |
ATAACGTACCTATTGATGAG+TGG | + | chr5_2:3571650-3571669 | Msa0750160:intron | 35.0% | |
! | AAATGAGTTGGAGAAAGACA+AGG | - | chr5_2:3571907-3571926 | None:intergenic | 35.0% |
GGATCTAGAGATAAATGAGT+TGG | - | chr5_2:3571919-3571938 | None:intergenic | 35.0% | |
CCTAAGAGAAACTATTAGGA+AGG | - | chr5_2:3571940-3571959 | None:intergenic | 35.0% | |
CCTTCCTAATAGTTTCTCTT+AGG | + | chr5_2:3571937-3571956 | Msa0750160:intron | 35.0% | |
GGAAAAATAGAGGACATTGT+TGG | + | chr5_2:3572025-3572044 | Msa0750160:intron | 35.0% | |
AAAATAGAGGACATTGTTGG+AGG | + | chr5_2:3572028-3572047 | Msa0750160:intron | 35.0% | |
AAATAGAGGACATTGTTGGA+GGG | + | chr5_2:3572029-3572048 | Msa0750160:intron | 35.0% | |
ATAAAATCCTCCTCATTTGG+GGG | + | chr5_2:3572081-3572100 | Msa0750160:intron | 35.0% | |
!!! | TTTTTTAGTTCCCCCAAATG+AGG | - | chr5_2:3572094-3572113 | None:intergenic | 35.0% |
TTGAGGGGACAAAAATATAG+GGG | - | chr5_2:3572284-3572303 | None:intergenic | 35.0% | |
! | CTTTGAGGGGACAAAAATAT+AGG | - | chr5_2:3572286-3572305 | None:intergenic | 35.0% |
! | CACTGCCTTATAGTTTTTCT+AGG | + | chr5_2:3572338-3572357 | Msa0750160:intron | 35.0% |
ACTGTGCAATCTATAGATGA+TGG | + | chr5_2:3572469-3572488 | Msa0750160:intron | 35.0% | |
TCAATCTACCAAAGTTCCAT+AGG | - | chr5_2:3572508-3572527 | None:intergenic | 35.0% | |
AGCTTCATTGTTGATCTACT+GGG | - | chr5_2:3572580-3572599 | None:intergenic | 35.0% | |
TAGCTTCATTGTTGATCTAC+TGG | - | chr5_2:3572581-3572600 | None:intergenic | 35.0% | |
!! | AATTGATGGTGAGATGTAGA+TGG | + | chr5_2:3572616-3572635 | Msa0750160:intron | 35.0% |
!! | ATTGATGGTGAGATGTAGAT+GGG | + | chr5_2:3572617-3572636 | Msa0750160:intron | 35.0% |
GAAGACTTCCCAATTACTAA+AGG | + | chr5_2:3572739-3572758 | Msa0750160:intron | 35.0% | |
TTGAGCCCTTATTCTTCTAT+AGG | + | chr5_2:3572781-3572800 | Msa0750160:intron | 35.0% | |
TAGCATAAGTGAGTGGAGTA+AGG | - | chr5_2:3563647-3563666 | None:intergenic | 40.0% | |
TGGAAACTGAAAGTTGCAGA+AGG | + | chr5_2:3563752-3563771 | Msa0750160:CDS | 40.0% | |
AAACTGAAAGTTGCAGAAGG+AGG | + | chr5_2:3563755-3563774 | Msa0750160:CDS | 40.0% | |
! | TTGACGAACGGATTCGATAT+CGG | - | chr5_2:3563867-3563886 | None:intergenic | 40.0% |
AAGATCATCGCTGTGTTTGT+GGG | - | chr5_2:3563912-3563931 | None:intergenic | 40.0% | |
TTCCTTCATCGGATTCTCTT+TGG | - | chr5_2:3563954-3563973 | None:intergenic | 40.0% | |
TTCGGTATCACTTCCTTCAT+CGG | - | chr5_2:3563965-3563984 | None:intergenic | 40.0% | |
TCAACTCTTCAGAGTCATGA+TGG | + | chr5_2:3564061-3564080 | Msa0750160:CDS | 40.0% | |
!! | TTCAGAGTCATGATGGACAT+TGG | + | chr5_2:3564068-3564087 | Msa0750160:CDS | 40.0% |
AAGCCAGGCATAAGAAACAT+AGG | - | chr5_2:3564112-3564131 | None:intergenic | 40.0% | |
TATGTTTCTTATGCCTGGCT+TGG | + | chr5_2:3564111-3564130 | Msa0750160:CDS | 40.0% | |
CTACTAAAACTTACCAAGCC+AGG | - | chr5_2:3564127-3564146 | None:intergenic | 40.0% | |
CTTAACAGACGAGCATAGAA+AGG | + | chr5_2:3564486-3564505 | Msa0750160:CDS | 40.0% | |
!! | TACTCTAAGATTGCTTGGTG+AGG | + | chr5_2:3564680-3564699 | Msa0750160:CDS | 40.0% |
!! | ACTCTAAGATTGCTTGGTGA+GGG | + | chr5_2:3564681-3564700 | Msa0750160:CDS | 40.0% |
! | GTGCTACTCATATAACATCC+TGG | + | chr5_2:3564763-3564782 | Msa0750160:CDS | 40.0% |
GCTACTCATATAACATCCTG+GGG | + | chr5_2:3564765-3564784 | Msa0750160:CDS | 40.0% | |
CTACTCATATAACATCCTGG+GGG | + | chr5_2:3564766-3564785 | Msa0750160:CDS | 40.0% | |
! | AGGTACTTGGAGTGTTTGAA+TGG | + | chr5_2:3564890-3564909 | Msa0750160:intron | 40.0% |
GAACAAGAACCTGGATGAAA+TGG | - | chr5_2:3564967-3564986 | None:intergenic | 40.0% | |
GTTATGGAAGAACAAGAACC+TGG | - | chr5_2:3564976-3564995 | None:intergenic | 40.0% | |
ACATTGGCAAATAGACCATC+CGG | - | chr5_2:3565148-3565167 | None:intergenic | 40.0% | |
!! | TTGCCAATGTGCTACTTGTA+CGG | + | chr5_2:3565158-3565177 | Msa0750160:CDS | 40.0% |
TTTCCGTACAAGTAGCACAT+TGG | - | chr5_2:3565164-3565183 | None:intergenic | 40.0% | |
TTGTACGGAAAGAGGTTTGT+TGG | + | chr5_2:3565173-3565192 | Msa0750160:CDS | 40.0% | |
TACCATACCATGATGTAGAC+TGG | + | chr5_2:3565243-3565262 | Msa0750160:CDS | 40.0% | |
TTCCAGTCTACATCATGGTA+TGG | - | chr5_2:3565248-3565267 | None:intergenic | 40.0% | |
GGTTAGTGAAACTGCATAAC+TGG | + | chr5_2:3565292-3565311 | Msa0750160:intron | 40.0% | |
ATTGTTTCATCTGGACCAAC+TGG | + | chr5_2:3565340-3565359 | Msa0750160:intron | 40.0% | |
!! | TAGTGATGGACGAATCTAGA+GGG | - | chr5_2:3565500-3565519 | None:intergenic | 40.0% |
!! | ATAGTGATGGACGAATCTAG+AGG | - | chr5_2:3565501-3565520 | None:intergenic | 40.0% |
GTTCCACTTTCAAGCTCAAA+GGG | - | chr5_2:3565601-3565620 | None:intergenic | 40.0% | |
TGTTCCACTTTCAAGCTCAA+AGG | - | chr5_2:3565602-3565621 | None:intergenic | 40.0% | |
! | TGGGGCATTCATGATTAAAG+TGG | + | chr5_2:3565654-3565673 | Msa0750160:intron | 40.0% |
GTCTTCCTGCACAAAAACAA+AGG | - | chr5_2:3565866-3565885 | None:intergenic | 40.0% | |
CAAAGAATATCTTGCACGAG+TGG | - | chr5_2:3565904-3565923 | None:intergenic | 40.0% | |
CACTCGTGCAAGATATTCTT+TGG | + | chr5_2:3565902-3565921 | Msa0750160:CDS | 40.0% | |
TCATACTCCTTCTCAAAGAG+TGG | - | chr5_2:3566134-3566153 | None:intergenic | 40.0% | |
TGCTAAATATGCTTTGCTGC+TGG | + | chr5_2:3566207-3566226 | Msa0750160:CDS | 40.0% | |
GCTAAATATGCTTTGCTGCT+GGG | + | chr5_2:3566208-3566227 | Msa0750160:CDS | 40.0% | |
GGTAGAAGATCCATATTCAG+AGG | + | chr5_2:3566229-3566248 | Msa0750160:CDS | 40.0% | |
!! | CTTTCAAGTTGCATCTTCCA+AGG | + | chr5_2:3566252-3566271 | Msa0750160:CDS | 40.0% |
TGAAGATGGCATGAAAATGC+AGG | + | chr5_2:3566298-3566317 | Msa0750160:CDS | 40.0% | |
GTCAACTTATTTCCCTTTGC+TGG | + | chr5_2:3566332-3566351 | Msa0750160:intron | 40.0% | |
CACTAGATAACTCCAGCAAA+GGG | - | chr5_2:3566347-3566366 | None:intergenic | 40.0% | |
TCACTAGATAACTCCAGCAA+AGG | - | chr5_2:3566348-3566367 | None:intergenic | 40.0% | |
GTTTGATTGTGCTGTAACAC+TGG | - | chr5_2:3566421-3566440 | None:intergenic | 40.0% | |
! | GCATTCCCAATTTTTGTTGC+AGG | + | chr5_2:3566488-3566507 | Msa0750160:intron | 40.0% |
GTAGCCCTGCAACAAAAATT+GGG | - | chr5_2:3566496-3566515 | None:intergenic | 40.0% | |
TGTAGCCCTGCAACAAAAAT+TGG | - | chr5_2:3566497-3566516 | None:intergenic | 40.0% | |
! | TTTTTGTTGCAGGGCTACAA+TGG | + | chr5_2:3566498-3566517 | Msa0750160:intron | 40.0% |
CTACAATGGAAGTCAGCTAT+GGG | + | chr5_2:3566512-3566531 | Msa0750160:CDS | 40.0% | |
GTATGAGCCTTTCTTAGAGT+TGG | - | chr5_2:3566594-3566613 | None:intergenic | 40.0% | |
AGAAGAGATTCTGGTCAACT+AGG | - | chr5_2:3566677-3566696 | None:intergenic | 40.0% | |
AAGGTTTCAGAAGATTGTCC+TGG | + | chr5_2:3566706-3566725 | Msa0750160:intron | 40.0% | |
GTCCTGGTGATCTTAGTAAA+TGG | + | chr5_2:3566722-3566741 | Msa0750160:CDS | 40.0% | |
TGGTACCGTCACATTTCAAA+AGG | + | chr5_2:3566742-3566761 | Msa0750160:CDS | 40.0% | |
!! | GTCACATTTCAAAAGGTGCT+TGG | + | chr5_2:3566749-3566768 | Msa0750160:CDS | 40.0% |
AATGGTTCACCAACAATCTC+AGG | - | chr5_2:3566934-3566953 | None:intergenic | 40.0% | |
! | TGAGATTGTTGGTGAACCAT+TGG | + | chr5_2:3566933-3566952 | Msa0750160:CDS | 40.0% |
CCCTGTTTAACCAAATTCAG+AGG | + | chr5_2:3567220-3567239 | Msa0750160:intron | 40.0% | |
!! | TTCAGAGGAAAAAGCATCTG+AGG | + | chr5_2:3567235-3567254 | Msa0750160:intron | 40.0% |
TAGCACGTGTATTGCAAACA+AGG | - | chr5_2:3567366-3567385 | None:intergenic | 40.0% | |
TACTCGGAAGTCTTTCTGTT+TGG | + | chr5_2:3567536-3567555 | Msa0750160:CDS | 40.0% | |
CATCTTCATTCTGCAGTGAT+TGG | - | chr5_2:3567787-3567806 | None:intergenic | 40.0% | |
CAATCACTGCAGAATGAAGA+TGG | + | chr5_2:3567785-3567804 | Msa0750160:intron | 40.0% | |
ATCACTGCAGAATGAAGATG+GGG | + | chr5_2:3567787-3567806 | Msa0750160:intron | 40.0% | |
TGTGAAGCATGTGATGGTAA+AGG | + | chr5_2:3567912-3567931 | Msa0750160:intron | 40.0% | |
GTGAAGCATGTGATGGTAAA+GGG | + | chr5_2:3567913-3567932 | Msa0750160:intron | 40.0% | |
TAGTTGGTCCTGAGAATTTG+AGG | + | chr5_2:3568385-3568404 | Msa0750160:intron | 40.0% | |
! | ATGATGGAGGGGATGAAATA+GGG | - | chr5_2:3568566-3568585 | None:intergenic | 40.0% |
! | AATGATGGAGGGGATGAAAT+AGG | - | chr5_2:3568567-3568586 | None:intergenic | 40.0% |
TACAAGCTTCAGATGGTTCA+TGG | + | chr5_2:3568754-3568773 | Msa0750160:CDS | 40.0% | |
AAAAGTGGTTTCCCATAAGG+AGG | - | chr5_2:3568786-3568805 | None:intergenic | 40.0% | |
GTAGAGAAAACTTGTGATGC+AGG | - | chr5_2:3568853-3568872 | None:intergenic | 40.0% | |
TTAGCAGTTTGAGTGGTTAG+TGG | - | chr5_2:3568929-3568948 | None:intergenic | 40.0% | |
TTTGCTTCACTTATGGCACT+TGG | + | chr5_2:3568970-3568989 | Msa0750160:CDS | 40.0% | |
TTCACTTATGGCACTTGGTT+TGG | + | chr5_2:3568975-3568994 | Msa0750160:CDS | 40.0% | |
TCACTTATGGCACTTGGTTT+GGG | + | chr5_2:3568976-3568995 | Msa0750160:CDS | 40.0% | |
CTTATGGTCTCTTGTAGCAA+TGG | + | chr5_2:3569318-3569337 | Msa0750160:intron | 40.0% | |
TAGCAATGGTTTCAAGCATG+TGG | + | chr5_2:3569332-3569351 | Msa0750160:intron | 40.0% | |
AGCAATGGTTTCAAGCATGT+GGG | + | chr5_2:3569333-3569352 | Msa0750160:intron | 40.0% | |
TGGACTCTTTATAGGAGACA+TGG | - | chr5_2:3569432-3569451 | None:intergenic | 40.0% | |
AATGGAGACCCAATGGTATT+GGG | - | chr5_2:3569555-3569574 | None:intergenic | 40.0% | |
GATGCAAACTAGGAAGACAA+TGG | - | chr5_2:3569573-3569592 | None:intergenic | 40.0% | |
! | GGAGCAAAAGTGTACAAAGA+AGG | - | chr5_2:3569782-3569801 | None:intergenic | 40.0% |
GATCAATGTAGCATTTGCAC+AGG | - | chr5_2:3569974-3569993 | None:intergenic | 40.0% | |
CTAAACAAGCCAGATCTAGT+TGG | - | chr5_2:3570013-3570032 | None:intergenic | 40.0% | |
CTTTAGCATTGTCTCTGTTC+AGG | + | chr5_2:3570373-3570392 | Msa0750160:intron | 40.0% | |
! | ACCGTGTGAGAATAACTTGT+TGG | + | chr5_2:3570779-3570798 | Msa0750160:intron | 40.0% |
GCCAACAAGTTATTCTCACA+CGG | - | chr5_2:3570783-3570802 | None:intergenic | 40.0% | |
GTATCAACAGCCAATCATAG+AGG | - | chr5_2:3570868-3570887 | None:intergenic | 40.0% | |
AAGTAAAACCAGATGGAAGG+GGG | - | chr5_2:3570999-3571018 | None:intergenic | 40.0% | |
! | TAAACATAACTTGTGGGGTG+AGG | - | chr5_2:3571026-3571045 | None:intergenic | 40.0% |
CTCTCATAGGCTTGAATCAA+AGG | + | chr5_2:3571214-3571233 | Msa0750160:intron | 40.0% | |
! | ACATTTGGAACATGACCAAG+TGG | + | chr5_2:3571418-3571437 | Msa0750160:intron | 40.0% |
GAACACGTGTTAATAAGTGG+TGG | - | chr5_2:3571552-3571571 | None:intergenic | 40.0% | |
ACAAAAACCATTGAAGGGGA+TGG | + | chr5_2:3571595-3571614 | Msa0750160:intron | 40.0% | |
GTACCTATTGATGAGTGGAA+GGG | + | chr5_2:3571655-3571674 | Msa0750160:intron | 40.0% | |
ATTCCCTTCCACTCATCAAT+AGG | - | chr5_2:3571661-3571680 | None:intergenic | 40.0% | |
TATTGATGAGTGGAAGGGAA+TGG | + | chr5_2:3571660-3571679 | Msa0750160:intron | 40.0% | |
ATTGATGAGTGGAAGGGAAT+GGG | + | chr5_2:3571661-3571680 | Msa0750160:intron | 40.0% | |
!! | CAAGCCTTATTCCACTAAGT+GGG | + | chr5_2:3571767-3571786 | Msa0750160:intron | 40.0% |
!! | AAGCCTTATTCCACTAAGTG+GGG | + | chr5_2:3571768-3571787 | Msa0750160:intron | 40.0% |
!! | TTAGGCTTTGTTTGCGAGTT+TGG | + | chr5_2:3571955-3571974 | Msa0750160:intron | 40.0% |
CGAGTAAGTGGGAAAAATAG+AGG | + | chr5_2:3572015-3572034 | Msa0750160:intron | 40.0% | |
AATAGAGGACATTGTTGGAG+GGG | + | chr5_2:3572030-3572049 | Msa0750160:intron | 40.0% | |
TGAGGGGACAAAAATATAGG+GGG | - | chr5_2:3572283-3572302 | None:intergenic | 40.0% | |
ATGAGTCACCTATGGAACTT+TGG | + | chr5_2:3572497-3572516 | Msa0750160:intron | 40.0% | |
GCTTCATTGTTGATCTACTG+GGG | - | chr5_2:3572579-3572598 | None:intergenic | 40.0% | |
!! | TTGATGGTGAGATGTAGATG+GGG | + | chr5_2:3572618-3572637 | Msa0750160:intron | 40.0% |
ACAGCTAGTGTTACAACACT+AGG | + | chr5_2:3572706-3572725 | Msa0750160:intron | 40.0% | |
CTAGTGTTACAACACTAGGT+GGG | + | chr5_2:3572710-3572729 | Msa0750160:intron | 40.0% | |
TTACTGAACATAGGCTAGAG+AGG | + | chr5_2:3572816-3572835 | Msa0750160:intron | 40.0% | |
TGCTTCGAGAAGAGATGTCT+TGG | - | chr5_2:3563558-3563577 | None:intergenic | 45.0% | |
GAAGATCATCGCTGTGTTTG+TGG | - | chr5_2:3563913-3563932 | None:intergenic | 45.0% | |
TGCCAAAGAGAATCCGATGA+AGG | + | chr5_2:3563949-3563968 | Msa0750160:CDS | 45.0% | |
ATAGGACCAGCATAATCACC+AGG | - | chr5_2:3564094-3564113 | None:intergenic | 45.0% | |
GGTCCTATGTTTCTTATGCC+TGG | + | chr5_2:3564106-3564125 | Msa0750160:CDS | 45.0% | |
!! | TACAGAATAAGGATGGTGGG+TGG | + | chr5_2:3564604-3564623 | Msa0750160:intron | 45.0% |
!! | ACAGAATAAGGATGGTGGGT+GGG | + | chr5_2:3564605-3564624 | Msa0750160:intron | 45.0% |
ACAGAACCAAACATGGTGCT+TGG | - | chr5_2:3564648-3564667 | None:intergenic | 45.0% | |
ATATCCCCTTCTCCATCGTT+TGG | - | chr5_2:3564708-3564727 | None:intergenic | 45.0% | |
AAACGATGGAGAAGGGGATA+TGG | + | chr5_2:3564707-3564726 | Msa0750160:CDS | 45.0% | |
! | TGTCGTTGTTGGTAGGTACT+TGG | + | chr5_2:3564877-3564896 | Msa0750160:intron | 45.0% |
! | CTTGGAGTGTTTGAATGGTC+CGG | + | chr5_2:3564895-3564914 | Msa0750160:CDS | 45.0% |
TATGGAAGGAGCCATAACTC+AGG | - | chr5_2:3564937-3564956 | None:intergenic | 45.0% | |
!! | TGTGCTACTTGTACGGAAAG+AGG | + | chr5_2:3565165-3565184 | Msa0750160:CDS | 45.0% |
CCTGATTCCAGTCTACATCA+TGG | - | chr5_2:3565253-3565272 | None:intergenic | 45.0% | |
CCATGATGTAGACTGGAATC+AGG | + | chr5_2:3565250-3565269 | Msa0750160:CDS | 45.0% | |
CAGGTTCAGCTTATTCCAGT+TGG | - | chr5_2:3565358-3565377 | None:intergenic | 45.0% | |
CTAGAACGGCAACAACATTC+AGG | - | chr5_2:3565377-3565396 | None:intergenic | 45.0% | |
CTCAAAGGGCTCTTGCATAA+GGG | - | chr5_2:3565587-3565606 | None:intergenic | 45.0% | |
TATGACATGGTACCAAAGCC+CGG | - | chr5_2:3565695-3565714 | None:intergenic | 45.0% | |
! | GGGAGAGTTAGTCTATGACA+TGG | - | chr5_2:3565708-3565727 | None:intergenic | 45.0% |
TCTTTGGGCAACTCTACACA+AGG | + | chr5_2:3565918-3565937 | Msa0750160:CDS | 45.0% | |
AAAGGCTGTCGAGACTGTAA+TGG | + | chr5_2:3565987-3566006 | Msa0750160:CDS | 45.0% | |
GCTACAATGGAAGTCAGCTA+TGG | + | chr5_2:3566511-3566530 | Msa0750160:CDS | 45.0% | |
!! | GATGATGGGGAGAAGATGAT+GGG | - | chr5_2:3567499-3567518 | None:intergenic | 45.0% |
TCGGAAGTCTTTCTGTTTGG+TGG | + | chr5_2:3567539-3567558 | Msa0750160:CDS | 45.0% | |
AATGGCAATGAGGAAGACGA+AGG | - | chr5_2:3567590-3567609 | None:intergenic | 45.0% | |
TCACTGCAGAATGAAGATGG+GGG | + | chr5_2:3567788-3567807 | Msa0750160:intron | 45.0% | |
GAGTGAGCTCATATGTTGCA+AGG | - | chr5_2:3567814-3567833 | None:intergenic | 45.0% | |
AGCTCACTCGATCTTATAGC+TGG | + | chr5_2:3567825-3567844 | Msa0750160:CDS | 45.0% | |
CACTCGATCTTATAGCTGGT+TGG | + | chr5_2:3567829-3567848 | Msa0750160:CDS | 45.0% | |
TCGATCTTATAGCTGGTTGG+AGG | + | chr5_2:3567832-3567851 | Msa0750160:CDS | 45.0% | |
GGTAGCCTTCTCTCGTAATT+AGG | + | chr5_2:3567853-3567872 | Msa0750160:intron | 45.0% | |
ACAGGCCTAATTACGAGAGA+AGG | - | chr5_2:3567861-3567880 | None:intergenic | 45.0% | |
CCTACGACACGACATCTAAA+GGG | - | chr5_2:3568068-3568087 | None:intergenic | 45.0% | |
ACCTACGACACGACATCTAA+AGG | - | chr5_2:3568069-3568088 | None:intergenic | 45.0% | |
!! | GGATTGGCTATCTGACAACA+GGG | - | chr5_2:3568470-3568489 | None:intergenic | 45.0% |
!! | AGGATTGGCTATCTGACAAC+AGG | - | chr5_2:3568471-3568490 | None:intergenic | 45.0% |
! | GCCAATCCTGCTGAAACTTT+TGG | + | chr5_2:3568482-3568501 | Msa0750160:CDS | 45.0% |
GCCAAAAGTTTCAGCAGGAT+TGG | - | chr5_2:3568486-3568505 | None:intergenic | 45.0% | |
ATGTCGCCAAAAGTTTCAGC+AGG | - | chr5_2:3568491-3568510 | None:intergenic | 45.0% | |
! | AACTATATCCCAGGCATCGT+CGG | + | chr5_2:3568682-3568701 | Msa0750160:CDS | 45.0% |
!! | TCATGGTTTGCTCCTCCTTA+TGG | + | chr5_2:3568771-3568790 | Msa0750160:intron | 45.0% |
!! | CATGGTTTGCTCCTCCTTAT+GGG | + | chr5_2:3568772-3568791 | Msa0750160:intron | 45.0% |
AACCACTCAAACTGCTAACC+AGG | + | chr5_2:3568931-3568950 | Msa0750160:intron | 45.0% | |
TACCTGGTTAGCAGTTTGAG+TGG | - | chr5_2:3568936-3568955 | None:intergenic | 45.0% | |
CTCAAACTGCTAACCAGGTA+TGG | + | chr5_2:3568936-3568955 | Msa0750160:intron | 45.0% | |
TGCTAACCAGGTATGGTTCT+TGG | + | chr5_2:3568943-3568962 | Msa0750160:intron | 45.0% | |
GCTAACCAGGTATGGTTCTT+GGG | + | chr5_2:3568944-3568963 | Msa0750160:intron | 45.0% | |
CTAACCAGGTATGGTTCTTG+GGG | + | chr5_2:3568945-3568964 | Msa0750160:intron | 45.0% | |
! | TGGGGAGTTTGCTTCACTTA+TGG | + | chr5_2:3568963-3568982 | Msa0750160:CDS | 45.0% |
! | CACTTATGGCACTTGGTTTG+GGG | + | chr5_2:3568977-3568996 | Msa0750160:CDS | 45.0% |
!! | GCACTTGGTTTGGGGTAAAA+GGG | + | chr5_2:3568985-3569004 | Msa0750160:CDS | 45.0% |
TAAAAGGGCTGATTGCTGCT+GGG | + | chr5_2:3569000-3569019 | Msa0750160:CDS | 45.0% | |
CAATGGAGACCCAATGGTAT+TGG | - | chr5_2:3569556-3569575 | None:intergenic | 45.0% | |
! | TGCGACACTAGGTTGACAAA+GGG | - | chr5_2:3569803-3569822 | None:intergenic | 45.0% |
TAGTAGGAGAGATATGGTGG+TGG | - | chr5_2:3569875-3569894 | None:intergenic | 45.0% | |
GGCTGTACGTCCATTATACT+AGG | - | chr5_2:3569952-3569971 | None:intergenic | 45.0% | |
AGGTCCCATGTAGTAAACAC+TGG | + | chr5_2:3570419-3570438 | Msa0750160:CDS | 45.0% | |
GGTCCCATGTAGTAAACACT+GGG | + | chr5_2:3570420-3570439 | Msa0750160:CDS | 45.0% | |
CCACCCAGTGTTTACTACAT+GGG | - | chr5_2:3570426-3570445 | None:intergenic | 45.0% | |
CCATGTAGTAAACACTGGGT+GGG | + | chr5_2:3570424-3570443 | Msa0750160:CDS | 45.0% | |
CATTCAACACCACACTTCTG+TGG | + | chr5_2:3570927-3570946 | Msa0750160:intron | 45.0% | |
ATGGAAGGGGGAATAGGAAA+GGG | - | chr5_2:3570987-3571006 | None:intergenic | 45.0% | |
! | AGCTTTGTGAGGGTTGAGTT+AGG | - | chr5_2:3571292-3571311 | None:intergenic | 45.0% |
TAACTCAACCCTCACAAAGC+TGG | + | chr5_2:3571291-3571310 | Msa0750160:intron | 45.0% | |
! | CTTACAAGCCAGCTTTGTGA+GGG | - | chr5_2:3571302-3571321 | None:intergenic | 45.0% |
GTCTCACATTGGATGAGAGA+TGG | - | chr5_2:3571362-3571381 | None:intergenic | 45.0% | |
AGTTTCGTAGAGGTTGAGCT+AGG | - | chr5_2:3571509-3571528 | None:intergenic | 45.0% | |
TAGCTCAACCTCTACGAAAC+TGG | + | chr5_2:3571508-3571527 | Msa0750160:intron | 45.0% | |
CCATTAACCATCCCCTTCAA+TGG | - | chr5_2:3571605-3571624 | None:intergenic | 45.0% | |
CCATTGAAGGGGATGGTTAA+TGG | + | chr5_2:3571602-3571621 | Msa0750160:intron | 45.0% | |
GAAGGGGATGGTTAATGGTA+AGG | + | chr5_2:3571607-3571626 | Msa0750160:intron | 45.0% | |
CGTACCTATTGATGAGTGGA+AGG | + | chr5_2:3571654-3571673 | Msa0750160:intron | 45.0% | |
TTGATGAGTGGAAGGGAATG+GGG | + | chr5_2:3571662-3571681 | Msa0750160:intron | 45.0% | |
CCACTTAGTGGAATAAGGCT+TGG | - | chr5_2:3571769-3571788 | None:intergenic | 45.0% | |
!! | CCAAGCCTTATTCCACTAAG+TGG | + | chr5_2:3571766-3571785 | Msa0750160:intron | 45.0% |
CTTATTCCACTAAGTGGGGT+CGG | + | chr5_2:3571772-3571791 | Msa0750160:intron | 45.0% | |
!! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr5_2:3571959-3571978 | Msa0750160:intron | 45.0% |
! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr5_2:3571960-3571979 | Msa0750160:intron | 45.0% |
! | GACATTGTTGGAGGGGTTTT+GGG | + | chr5_2:3572037-3572056 | Msa0750160:intron | 45.0% |
! | ACATTGTTGGAGGGGTTTTG+GGG | + | chr5_2:3572038-3572057 | Msa0750160:intron | 45.0% |
! | TTTAGTTCCCCCAAATGAGG+AGG | - | chr5_2:3572091-3572110 | None:intergenic | 45.0% |
TAAGGCAGTGTTTGGGAGTT+TGG | - | chr5_2:3572328-3572347 | None:intergenic | 45.0% | |
TGGAACTCATGAGTCACCTA+TGG | + | chr5_2:3572489-3572508 | Msa0750160:intron | 45.0% | |
GCTAGTGTTACAACACTAGG+TGG | + | chr5_2:3572709-3572728 | Msa0750160:intron | 45.0% | |
!! | AAATAATATCATAAAAAATA+AGG | - | chr5_2:3564820-3564839 | None:intergenic | 5.0% |
!! | ATATATATATATATTTCATA+TGG | + | chr5_2:3568334-3568353 | Msa0750160:intron | 5.0% |
!! | AATAAAAATAAAATTAAGAT+TGG | - | chr5_2:3568591-3568610 | None:intergenic | 5.0% |
!!! | TTTTTTTTTAATTAATATCT+TGG | + | chr5_2:3569231-3569250 | Msa0750160:intron | 5.0% |
!! | ATAATTAATTAATCATTAAA+AGG | - | chr5_2:3570224-3570243 | None:intergenic | 5.0% |
ATCACGTCGGCAGACAACTT+TGG | + | chr5_2:3563804-3563823 | Msa0750160:CDS | 50.0% | |
TCACGTCGGCAGACAACTTT+GGG | + | chr5_2:3563805-3563824 | Msa0750160:CDS | 50.0% | |
TGGGAGTTCGATCCTAACTC+CGG | + | chr5_2:3563824-3563843 | Msa0750160:CDS | 50.0% | |
TCGATATCGGCGAGATCTTG+TGG | - | chr5_2:3563854-3563873 | None:intergenic | 50.0% | |
!! | AGTCATGATGGACATTGGCC+TGG | + | chr5_2:3564073-3564092 | Msa0750160:CDS | 50.0% |
! | CATTGGCCTGGTGATTATGC+TGG | + | chr5_2:3564085-3564104 | Msa0750160:CDS | 50.0% |
!! | CAGAATAAGGATGGTGGGTG+GGG | + | chr5_2:3564606-3564625 | Msa0750160:intron | 50.0% |
GGGTGGGGTTTGCATATTGA+AGG | + | chr5_2:3564621-3564640 | Msa0750160:CDS | 50.0% | |
GAAGGTCCAAGCACCATGTT+TGG | + | chr5_2:3564639-3564658 | Msa0750160:CDS | 50.0% | |
AGGGACCAAACGATGGAGAA+GGG | + | chr5_2:3564700-3564719 | Msa0750160:CDS | 50.0% | |
TGGAGAAGGGGATATGGAGA+AGG | + | chr5_2:3564713-3564732 | Msa0750160:CDS | 50.0% | |
! | ATATGGAGAAGGCACGTGAC+TGG | + | chr5_2:3564724-3564743 | Msa0750160:CDS | 50.0% |
CGTGACTGGATTCTTGAGCA+TGG | + | chr5_2:3564738-3564757 | Msa0750160:CDS | 50.0% | |
GACTGGATTCTTGAGCATGG+TGG | + | chr5_2:3564741-3564760 | Msa0750160:CDS | 50.0% | |
TAACATCCTGGGGGAAGATG+TGG | + | chr5_2:3564775-3564794 | Msa0750160:CDS | 50.0% | |
AGGAGGCAGGGGATTATTTC+CGG | - | chr5_2:3564917-3564936 | None:intergenic | 50.0% | |
GGCCCGCAATTTATGTGCAA+AGG | + | chr5_2:3565271-3565290 | Msa0750160:CDS | 50.0% | |
GTTCGCGCTAAGGATACGAA+TGG | - | chr5_2:3565471-3565490 | None:intergenic | 50.0% | |
GCTCAAAGGGCTCTTGCATA+AGG | - | chr5_2:3565588-3565607 | None:intergenic | 50.0% | |
GAGCCCTTTGAGCTTGAAAG+TGG | + | chr5_2:3565595-3565614 | Msa0750160:intron | 50.0% | |
ATATCTTGCACGAGTGGGTG+AGG | - | chr5_2:3565898-3565917 | None:intergenic | 50.0% | |
TGAGAGGTGGCAAGCTTCTA+TGG | + | chr5_2:3566077-3566096 | Msa0750160:intron | 50.0% | |
GAGAGGTGGCAAGCTTCTAT+GGG | + | chr5_2:3566078-3566097 | Msa0750160:intron | 50.0% | |
AGAGGTGGCAAGCTTCTATG+GGG | + | chr5_2:3566079-3566098 | Msa0750160:intron | 50.0% | |
TCGGCTGTGCAGTCAGATAT+TGG | - | chr5_2:3566802-3566821 | None:intergenic | 50.0% | |
ATATCTGACTGCACAGCCGA+AGG | + | chr5_2:3566802-3566821 | Msa0750160:CDS | 50.0% | |
!! | CGATGATGGGGAGAAGATGA+TGG | - | chr5_2:3567500-3567519 | None:intergenic | 50.0% |
CGGTGATAAAGAGAAGGCTG+AGG | - | chr5_2:3567567-3567586 | None:intergenic | 50.0% | |
CGAAGGCGGTGATAAAGAGA+AGG | - | chr5_2:3567573-3567592 | None:intergenic | 50.0% | |
CCCTTTAGATGTCGTGTCGT+AGG | + | chr5_2:3568065-3568084 | Msa0750160:intron | 50.0% | |
TGGCTATCTGACAACAGGGA+AGG | - | chr5_2:3568466-3568485 | None:intergenic | 50.0% | |
GTGTACCTCAGCAGCAATTC+AGG | + | chr5_2:3568641-3568660 | Msa0750160:CDS | 50.0% | |
CAAAGCCTGAATTGCTGCTG+AGG | - | chr5_2:3568649-3568668 | None:intergenic | 50.0% | |
! | ACTATATCCCAGGCATCGTC+GGG | + | chr5_2:3568683-3568702 | Msa0750160:CDS | 50.0% |
ATTTCTTCCCGACGATGCCT+GGG | - | chr5_2:3568693-3568712 | None:intergenic | 50.0% | |
TATTTCTTCCCGACGATGCC+TGG | - | chr5_2:3568694-3568713 | None:intergenic | 50.0% | |
AACTCCCCAAGAACCATACC+TGG | - | chr5_2:3568952-3568971 | None:intergenic | 50.0% | |
!! | GGCACTTGGTTTGGGGTAAA+AGG | + | chr5_2:3568984-3569003 | Msa0750160:CDS | 50.0% |
GTAAAAGGGCTGATTGCTGC+TGG | + | chr5_2:3568999-3569018 | Msa0750160:CDS | 50.0% | |
!! | ACCAAAAGGAGTGCCAAGCA+AGG | - | chr5_2:3569468-3569487 | None:intergenic | 50.0% |
GGAAGACAATGGAGACCCAA+TGG | - | chr5_2:3569562-3569581 | None:intergenic | 50.0% | |
! | GTGCGACACTAGGTTGACAA+AGG | - | chr5_2:3569804-3569823 | None:intergenic | 50.0% |
TGTCAACCTAGTGTCGCACA+CGG | + | chr5_2:3569805-3569824 | Msa0750160:intron | 50.0% | |
CCCATGTAGTAAACACTGGG+TGG | + | chr5_2:3570423-3570442 | Msa0750160:CDS | 50.0% | |
CCCACCCAGTGTTTACTACA+TGG | - | chr5_2:3570427-3570446 | None:intergenic | 50.0% | |
CAACACCACACTTCTGTGGA+TGG | + | chr5_2:3570931-3570950 | Msa0750160:intron | 50.0% | |
ACCACACTTCTGTGGATGGA+GGG | + | chr5_2:3570935-3570954 | Msa0750160:intron | 50.0% | |
! | GATGGAGGGCATGAGAGTAT+GGG | + | chr5_2:3570949-3570968 | Msa0750160:intron | 50.0% |
GATGGAAGGGGGAATAGGAA+AGG | - | chr5_2:3570988-3571007 | None:intergenic | 50.0% | |
TTCCTATTCCCCCTTCCATC+TGG | + | chr5_2:3570988-3571007 | Msa0750160:intron | 50.0% | |
AACCAGATGGAAGGGGGAAT+AGG | - | chr5_2:3570993-3571012 | None:intergenic | 50.0% | |
! | CCTTACAAGCCAGCTTTGTG+AGG | - | chr5_2:3571303-3571322 | None:intergenic | 50.0% |
!! | CCTCACAAAGCTGGCTTGTA+AGG | + | chr5_2:3571300-3571319 | Msa0750160:intron | 50.0% |
ACAGACACACATTCACGCTC+AGG | + | chr5_2:3571390-3571409 | Msa0750160:intron | 50.0% | |
CACGCTCAGGACTAGACATT+TGG | + | chr5_2:3571403-3571422 | Msa0750160:intron | 50.0% | |
ATGACCAAGTGGCCTGATAG+CGG | + | chr5_2:3571429-3571448 | Msa0750160:intron | 50.0% | |
CCTCTACGAAACTGGATGCA+CGG | + | chr5_2:3571516-3571535 | Msa0750160:intron | 50.0% | |
TGATGAGTGGAAGGGAATGG+GGG | + | chr5_2:3571663-3571682 | Msa0750160:intron | 50.0% | |
CGACCCCACTTAGTGGAATA+AGG | - | chr5_2:3571774-3571793 | None:intergenic | 50.0% | |
ATATAGCCGACCCCACTTAG+TGG | - | chr5_2:3571781-3571800 | None:intergenic | 50.0% | |
!! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr5_2:3571958-3571977 | Msa0750160:intron | 50.0% |
TTTGCGAGTTTGGAGGGGAA+GGG | + | chr5_2:3571965-3571984 | Msa0750160:intron | 50.0% | |
! | GGACATTGTTGGAGGGGTTT+TGG | + | chr5_2:3572036-3572055 | Msa0750160:intron | 50.0% |
!! | CATTGTTGGAGGGGTTTTGG+GGG | + | chr5_2:3572039-3572058 | Msa0750160:intron | 50.0% |
!!! | ATTGTTGGAGGGGTTTTGGG+GGG | + | chr5_2:3572040-3572059 | Msa0750160:intron | 50.0% |
ATTGTATCGGAGGAGGGCTT+TGG | + | chr5_2:3572114-3572133 | Msa0750160:intron | 50.0% | |
TTGTATCGGAGGAGGGCTTT+GGG | + | chr5_2:3572115-3572134 | Msa0750160:intron | 50.0% | |
! | TTTGGGAGTTTGGAGTGGAG+GGG | - | chr5_2:3572318-3572337 | None:intergenic | 50.0% |
! | GTTTGGGAGTTTGGAGTGGA+GGG | - | chr5_2:3572319-3572338 | None:intergenic | 50.0% |
! | TGTTTGGGAGTTTGGAGTGG+AGG | - | chr5_2:3572320-3572339 | None:intergenic | 50.0% |
CAGTGTTTGGGAGTTTGGAG+TGG | - | chr5_2:3572323-3572342 | None:intergenic | 50.0% | |
TAGGCTAGAGAGGTTGTCAC+AGG | + | chr5_2:3572826-3572845 | Msa0750160:intron | 50.0% | |
AGAGGTTGTCACAGGTTCAC+AGG | + | chr5_2:3572834-3572853 | Msa0750160:CDS | 50.0% | |
GAGGTTGTCACAGGTTCACA+GGG | + | chr5_2:3572835-3572854 | Msa0750160:CDS | 50.0% | |
GGTTCACAGGGAATGCTTGT+TGG | + | chr5_2:3572847-3572866 | Msa0750160:CDS | 50.0% | |
TTGCAGAAGGAGGCAGTCCA+TGG | + | chr5_2:3563765-3563784 | Msa0750160:CDS | 55.0% | |
TCTTGTGGCGATCCGGAGTT+AGG | - | chr5_2:3563839-3563858 | None:intergenic | 55.0% | |
CTTGGTGAGGGACCAAACGA+TGG | + | chr5_2:3564693-3564712 | Msa0750160:CDS | 55.0% | |
GAGGGACCAAACGATGGAGA+AGG | + | chr5_2:3564699-3564718 | Msa0750160:CDS | 55.0% | |
GGGACCAAACGATGGAGAAG+GGG | + | chr5_2:3564701-3564720 | Msa0750160:CDS | 55.0% | |
TGAAAGCCACATCTTCCCCC+AGG | - | chr5_2:3564784-3564803 | None:intergenic | 55.0% | |
ATCCCCTGCCTCCTGAGTTA+TGG | + | chr5_2:3564923-3564942 | Msa0750160:CDS | 55.0% | |
AGCCATAACTCAGGAGGCAG+GGG | - | chr5_2:3564928-3564947 | None:intergenic | 55.0% | |
GAGCCATAACTCAGGAGGCA+GGG | - | chr5_2:3564929-3564948 | None:intergenic | 55.0% | |
GGAAGGAGCCATAACTCAGG+AGG | - | chr5_2:3564934-3564953 | None:intergenic | 55.0% | |
!! | GAAGGATGTGGTGTCACTGC+CGG | + | chr5_2:3565126-3565145 | Msa0750160:CDS | 55.0% |
GTGGCGATCGGTTGTTCATC+CGG | + | chr5_2:3565673-3565692 | Msa0750160:intron | 55.0% | |
TGGCGATCGGTTGTTCATCC+GGG | + | chr5_2:3565674-3565693 | Msa0750160:intron | 55.0% | |
TCGGTTGTTCATCCGGGCTT+TGG | + | chr5_2:3565680-3565699 | Msa0750160:intron | 55.0% | |
GGCAATGAGGAAGACGAAGG+CGG | - | chr5_2:3567587-3567606 | None:intergenic | 55.0% | |
CTGTCTAAGCAGCTCCCATC+TGG | + | chr5_2:3569071-3569090 | Msa0750160:CDS | 55.0% | |
TCTAAGCAGCTCCCATCTGG+TGG | + | chr5_2:3569074-3569093 | Msa0750160:CDS | 55.0% | |
TCTCTCCCCAACCACCAGAT+GGG | - | chr5_2:3569088-3569107 | None:intergenic | 55.0% | |
! | GCCTTGCTTGGCACTCCTTT+TGG | + | chr5_2:3569464-3569483 | Msa0750160:intron | 55.0% |
!! | AAACACTGGGTGGGCTATGC+TGG | + | chr5_2:3570433-3570452 | Msa0750160:CDS | 55.0% |
!! | GGCTATGCTGGCTCTCATTG+AGG | + | chr5_2:3570445-3570464 | Msa0750160:CDS | 55.0% |
GGCTCTCATTGAGGCTGAAC+AGG | + | chr5_2:3570454-3570473 | Msa0750160:CDS | 55.0% | |
AGCTTAGGTGTGCCTGTCTC+TGG | + | chr5_2:3570634-3570653 | Msa0750160:intron | 55.0% | |
CACCACACTTCTGTGGATGG+AGG | + | chr5_2:3570934-3570953 | Msa0750160:intron | 55.0% | |
! | GGATGGAGGGCATGAGAGTA+TGG | + | chr5_2:3570948-3570967 | Msa0750160:intron | 55.0% |
! | GGCATGAGAGTATGGGCAGA+GGG | + | chr5_2:3570956-3570975 | Msa0750160:intron | 55.0% |
TGACCAAGTGGCCTGATAGC+GGG | + | chr5_2:3571430-3571449 | Msa0750160:intron | 55.0% | |
CCGTGCATCCAGTTTCGTAG+AGG | - | chr5_2:3571519-3571538 | None:intergenic | 55.0% | |
ACGAAACTGGATGCACGGTG+AGG | + | chr5_2:3571521-3571540 | Msa0750160:intron | 55.0% | |
CGAAACTGGATGCACGGTGA+GGG | + | chr5_2:3571522-3571541 | Msa0750160:intron | 55.0% | |
GTTTGCGAGTTTGGAGGGGA+AGG | + | chr5_2:3571964-3571983 | Msa0750160:intron | 55.0% | |
TGTATCGGAGGAGGGCTTTG+GGG | + | chr5_2:3572116-3572135 | Msa0750160:intron | 55.0% | |
! | AGGGGAAGGAAGGGCTTTGA+GGG | - | chr5_2:3572300-3572319 | None:intergenic | 55.0% |
TTGGAGTGGAGGGGAAGGAA+GGG | - | chr5_2:3572309-3572328 | None:intergenic | 55.0% | |
! | TTTGGAGTGGAGGGGAAGGA+AGG | - | chr5_2:3572310-3572329 | None:intergenic | 55.0% |
GGCGAGATCTTGTGGCGATC+CGG | - | chr5_2:3563846-3563865 | None:intergenic | 60.0% | |
GGAGCCATAACTCAGGAGGC+AGG | - | chr5_2:3564930-3564949 | None:intergenic | 60.0% | |
!! | GATGTGGTGTCACTGCCGGA+TGG | + | chr5_2:3565130-3565149 | Msa0750160:CDS | 60.0% |
AGGGAGCAGAGTTCGCGCTA+AGG | - | chr5_2:3565481-3565500 | None:intergenic | 60.0% | |
AGCAGCTCCCATCTGGTGGT+TGG | + | chr5_2:3569078-3569097 | Msa0750160:CDS | 60.0% | |
GCAGCTCCCATCTGGTGGTT+GGG | + | chr5_2:3569079-3569098 | Msa0750160:CDS | 60.0% | |
CAGCTCCCATCTGGTGGTTG+GGG | + | chr5_2:3569080-3569099 | Msa0750160:CDS | 60.0% | |
CTCTCTCCCCAACCACCAGA+TGG | - | chr5_2:3569089-3569108 | None:intergenic | 60.0% | |
GTGTTGCCGTGTGCGACACT+AGG | - | chr5_2:3569814-3569833 | None:intergenic | 60.0% | |
CACGGTCGCACCTCTCATGA+AGG | - | chr5_2:3570765-3570784 | None:intergenic | 60.0% | |
GCCCTCCATCCACAGAAGTG+TGG | - | chr5_2:3570939-3570958 | None:intergenic | 60.0% | |
! | GGGCATGAGAGTATGGGCAG+AGG | + | chr5_2:3570955-3570974 | Msa0750160:intron | 60.0% |
CAGTTCGACCACCCGCTATC+AGG | - | chr5_2:3571444-3571463 | None:intergenic | 60.0% | |
GCGGGTGGTCGAACTGATCT+TGG | + | chr5_2:3571448-3571467 | Msa0750160:intron | 60.0% | |
CGAGTTTGGAGGGGAAGGGA+GGG | + | chr5_2:3571969-3571988 | Msa0750160:intron | 60.0% | |
GAGTTTGGAGGGGAAGGGAG+GGG | + | chr5_2:3571970-3571989 | Msa0750160:intron | 60.0% | |
! | GTATCGGAGGAGGGCTTTGG+GGG | + | chr5_2:3572117-3572136 | Msa0750160:intron | 60.0% |
!! | TATCGGAGGAGGGCTTTGGG+GGG | + | chr5_2:3572118-3572137 | Msa0750160:intron | 60.0% |
!! | AGGAGGGCTTTGGGGGGTTT+GGG | + | chr5_2:3572124-3572143 | Msa0750160:intron | 60.0% |
!! | GGGGAAGGAAGGGCTTTGAG+GGG | - | chr5_2:3572299-3572318 | None:intergenic | 60.0% |
GAGGGGAAGGAAGGGCTTTG+AGG | - | chr5_2:3572301-3572320 | None:intergenic | 60.0% | |
! | GGAGTTTGGAGTGGAGGGGA+AGG | - | chr5_2:3572314-3572333 | None:intergenic | 60.0% |
CCACCCGCTATCAGGCCACT+TGG | - | chr5_2:3571436-3571455 | None:intergenic | 65.0% | |
!! | CCAAGTGGCCTGATAGCGGG+TGG | + | chr5_2:3571433-3571452 | Msa0750160:intron | 65.0% |
GCGAGTTTGGAGGGGAAGGG+AGG | + | chr5_2:3571968-3571987 | Msa0750160:intron | 65.0% | |
TTTGGAGGGGAAGGGAGGGG+AGG | + | chr5_2:3571973-3571992 | Msa0750160:intron | 65.0% | |
TTGGAGGGGAAGGGAGGGGA+GGG | + | chr5_2:3571974-3571993 | Msa0750160:intron | 65.0% | |
!! | GAGGAGGGCTTTGGGGGGTT+TGG | + | chr5_2:3572123-3572142 | Msa0750160:intron | 65.0% |
!! | AGGGCTTTGGGGGGTTTGGG+AGG | + | chr5_2:3572127-3572146 | Msa0750160:intron | 65.0% |
!! | GGGCTTTGGGGGGTTTGGGA+GGG | + | chr5_2:3572128-3572147 | Msa0750160:intron | 65.0% |
GGGGAAGGGAGGGGAGGGTT+TGG | + | chr5_2:3571979-3571998 | Msa0750160:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 3563416 | 3572900 | 3563416 | ID=Msa0750160;Name=Msa0750160 |
chr5_2 | mRNA | 3563416 | 3572900 | 3563416 | ID=Msa0750160-mRNA-1;Parent=Msa0750160;Name=Msa0750160-mRNA-1;_AED=0.27;_eAED=0.29;_QI=207|0.72|0.78|0.89|0.94|0.89|19|0|786 |
chr5_2 | exon | 3563416 | 3563594 | 3563416 | ID=Msa0750160-mRNA-1:exon:1270;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3563721 | 3564132 | 3563721 | ID=Msa0750160-mRNA-1:exon:1271;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3564448 | 3564537 | 3564448 | ID=Msa0750160-mRNA-1:exon:1272;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3564609 | 3564803 | 3564609 | ID=Msa0750160-mRNA-1:exon:1273;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3564892 | 3564976 | 3564892 | ID=Msa0750160-mRNA-1:exon:1274;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3565126 | 3565292 | 3565126 | ID=Msa0750160-mRNA-1:exon:1275;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3565880 | 3566068 | 3565880 | ID=Msa0750160-mRNA-1:exon:1276;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3566206 | 3566319 | 3566206 | ID=Msa0750160-mRNA-1:exon:1277;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3566510 | 3566632 | 3566510 | ID=Msa0750160-mRNA-1:exon:1278;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3566709 | 3566831 | 3566709 | ID=Msa0750160-mRNA-1:exon:1279;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3566904 | 3567002 | 3566904 | ID=Msa0750160-mRNA-1:exon:1280;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3567491 | 3567628 | 3567491 | ID=Msa0750160-mRNA-1:exon:1281;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3567797 | 3567853 | 3567797 | ID=Msa0750160-mRNA-1:exon:1282;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3568479 | 3568525 | 3568479 | ID=Msa0750160-mRNA-1:exon:1283;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3568632 | 3568775 | 3568632 | ID=Msa0750160-mRNA-1:exon:1284;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3568953 | 3569135 | 3568953 | ID=Msa0750160-mRNA-1:exon:1285;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3569335 | 3569404 | 3569335 | ID=Msa0750160-mRNA-1:exon:1286;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3570395 | 3570475 | 3570395 | ID=Msa0750160-mRNA-1:exon:1287;Parent=Msa0750160-mRNA-1 |
chr5_2 | exon | 3572829 | 3572900 | 3572829 | ID=Msa0750160-mRNA-1:exon:1288;Parent=Msa0750160-mRNA-1 |
chr5_2 | five_prime_UTR | 3563416 | 3563594 | 3563416 | ID=Msa0750160-mRNA-1:five_prime_utr;Parent=Msa0750160-mRNA-1 |
chr5_2 | five_prime_UTR | 3563721 | 3563748 | 3563721 | ID=Msa0750160-mRNA-1:five_prime_utr;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3563749 | 3564132 | 3563749 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3564448 | 3564537 | 3564448 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3564609 | 3564803 | 3564609 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3564892 | 3564976 | 3564892 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3565126 | 3565292 | 3565126 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3565880 | 3566068 | 3565880 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3566206 | 3566319 | 3566206 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3566510 | 3566632 | 3566510 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3566709 | 3566831 | 3566709 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3566904 | 3567002 | 3566904 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3567491 | 3567628 | 3567491 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3567797 | 3567853 | 3567797 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3568479 | 3568525 | 3568479 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3568632 | 3568775 | 3568632 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3568953 | 3569135 | 3568953 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3569335 | 3569404 | 3569335 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3570395 | 3570475 | 3570395 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
chr5_2 | CDS | 3572829 | 3572900 | 3572829 | ID=Msa0750160-mRNA-1:cds;Parent=Msa0750160-mRNA-1 |
Gene Sequence |
Protein sequence |