Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043230 | sp|F4I1S7|ELP2_ARATH | 63.051 | 839 | 268 | 13 | 7 | 813 | 7 | 835 | 0.0 | 1059 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000560 | Msa0043230 | 0.807104 | 5.948994e-50 | -8.615850e-47 |
| Msa0008110 | Msa0043230 | 0.815211 | 1.038260e-51 | -8.615850e-47 |
| Msa0043230 | Msa0090400 | 0.811542 | 6.644605e-51 | -8.615850e-47 |
| Msa0043230 | Msa0137130 | 0.855370 | 6.601936e-62 | -8.615850e-47 |
| Msa0043230 | Msa0137880 | 0.827874 | 1.229417e-54 | -8.615850e-47 |
| Msa0043230 | Msa0149370 | 0.805619 | 1.223245e-49 | -8.615850e-47 |
| Msa0043230 | Msa0182320 | 0.928450 | 2.837695e-92 | -8.615850e-47 |
| Msa0043230 | Msa0255090 | 0.819339 | 1.223217e-52 | -8.615850e-47 |
| Msa0043230 | Msa0259380 | 0.816957 | 4.230199e-52 | -8.615850e-47 |
| Msa0043230 | Msa0267110 | 0.816425 | 5.566206e-52 | -8.615850e-47 |
| Msa0043230 | Msa0292330 | 0.815447 | 9.203268e-52 | -8.615850e-47 |
| Msa0043230 | Msa0349710 | 0.871818 | 5.115941e-67 | -8.615850e-47 |
| Msa0043230 | Msa0428150 | 0.834186 | 3.466495e-56 | -8.615850e-47 |
| Msa0043230 | Msa0442830 | 0.800886 | 1.167657e-48 | -8.615850e-47 |
| Msa0043230 | Msa0444070 | 0.847462 | 1.138888e-59 | -8.615850e-47 |
| Msa0043230 | Msa0462500 | 0.853474 | 2.334134e-61 | -8.615850e-47 |
| Msa0043230 | Msa0474520 | 0.805981 | 1.026818e-49 | -8.615850e-47 |
| Msa0043230 | Msa0483910 | 0.802110 | 6.552700e-49 | -8.615850e-47 |
| Msa0043230 | Msa0689520 | 0.813658 | 2.289338e-51 | -8.615850e-47 |
| Msa0043230 | Msa0711970 | 0.811619 | 6.393947e-51 | -8.615850e-47 |
| Msa0043230 | Msa0749740 | 0.829514 | 4.934337e-55 | -8.615850e-47 |
| Msa0043230 | Msa0749770 | 0.818775 | 1.643358e-52 | -8.615850e-47 |
| Msa0043230 | Msa0750090 | 0.824224 | 9.063481e-54 | -8.615850e-47 |
| Msa0043230 | Msa0751570 | 0.804151 | 2.479405e-49 | -8.615850e-47 |
| Msa0043230 | Msa0794810 | 0.808040 | 3.765282e-50 | -8.615850e-47 |
| Msa0043230 | Msa0832910 | 0.800420 | 1.453148e-48 | -8.615850e-47 |
| Msa0043230 | Msa0880680 | 0.819189 | 1.323751e-52 | -8.615850e-47 |
| Msa0043230 | Msa0945110 | 0.807263 | 5.505963e-50 | -8.615850e-47 |
| Msa0043230 | Msa1003800 | 0.809575 | 1.768121e-50 | -8.615850e-47 |
| Msa0043230 | Msa1018690 | 0.824873 | 6.373513e-54 | -8.615850e-47 |
| Msa0043230 | Msa1074370 | 0.807940 | 3.953867e-50 | -8.615850e-47 |
| Msa0043230 | Msa1196450 | 0.817651 | 2.952908e-52 | -8.615850e-47 |
| Msa0043230 | Msa1204340 | 0.803973 | 2.699376e-49 | -8.615850e-47 |
| Msa0043230 | Msa1268670 | 0.817782 | 2.758621e-52 | -8.615850e-47 |
| Msa0043230 | Msa1321340 | 0.805753 | 1.146583e-49 | -8.615850e-47 |
| Msa0043230 | Msa1413690 | 0.806491 | 8.017834e-50 | -8.615850e-47 |
| Msa0043230 | Msa1419460 | 0.921673 | 2.643638e-88 | -8.615850e-47 |
| Msa0043230 | Msa1423670 | 0.916095 | 2.688469e-85 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043230 | MtrunA17_Chr1g0209161 | 95.335 | 836 | 19 | 1 | 1 | 816 | 1 | 836 | 0.0 | 1633 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043230 | AT1G49540.1 | 63.051 | 839 | 268 | 13 | 7 | 813 | 7 | 835 | 0.0 | 1059 |
| Msa0043230 | AT1G49540.2 | 63.020 | 841 | 267 | 14 | 7 | 813 | 7 | 837 | 0.0 | 1056 |
Find 235 sgRNAs with CRISPR-Local
Find 464 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGACAAACATCCAGATTT+TGG | 0.080849 | 1_1:+74335167 | Msa0043230:CDS |
| CAGATGGTACTGTTTGTATA+TGG | 0.208305 | 1_1:+74333031 | Msa0043230:CDS |
| ACCTCTCCATTGATGCTTAC+AGG | 0.211910 | 1_1:-74333516 | None:intergenic |
| TACATGTATTGATGGAATTA+TGG | 0.212375 | 1_1:+74332972 | Msa0043230:CDS |
| AACTAACCTTGGGCATAAAT+AGG | 0.234409 | 1_1:-74335225 | None:intergenic |
| AAGACAAATGCATACGAATT+TGG | 0.242871 | 1_1:+74333568 | Msa0043230:CDS |
| GAACTGCATTATTTGCTATC+TGG | 0.268434 | 1_1:+74332756 | Msa0043230:CDS |
| AGAAGAAGAAGAAAGAGAAT+TGG | 0.272509 | 1_1:-74332126 | None:intergenic |
| ATGGTGGATCGTTCCATCTT+TGG | 0.278484 | 1_1:+74333982 | Msa0043230:CDS |
| CTGATGGTGCTATTATTCTA+TGG | 0.290612 | 1_1:+74332784 | Msa0043230:CDS |
| GTACATTCATGTGAGCTAAA+AGG | 0.291991 | 1_1:+74333456 | Msa0043230:CDS |
| GCTAAAATTGAATCTCCATT+TGG | 0.295581 | 1_1:-74333951 | None:intergenic |
| ACAGACTCCACAACTCTATT+TGG | 0.297076 | 1_1:-74337971 | None:intergenic |
| TCCAATCAAAAGAGATTCTA+AGG | 0.303182 | 1_1:-74333712 | None:intergenic |
| CCATAGAGTTTATGTGATTC+AGG | 0.311737 | 1_1:-74336566 | None:intergenic |
| TACAGATTGGATCCGGAGTT+TGG | 0.311793 | 1_1:+74333482 | Msa0043230:CDS |
| TCCATCCTCTTGTCTGTTAT+AGG | 0.312730 | 1_1:-74337994 | None:intergenic |
| AACGTTTCTTGGGGTGCTTC+TGG | 0.315004 | 1_1:+74332285 | Msa0043230:CDS |
| TTCTTTATGCTGTGATCATA+AGG | 0.318251 | 1_1:+74336607 | Msa0043230:CDS |
| ACATATTTGCACCCAAAATC+TGG | 0.321358 | 1_1:-74335179 | None:intergenic |
| GGATTATCTGGTCATGTTCT+TGG | 0.328711 | 1_1:+74337754 | Msa0043230:CDS |
| TTCCGTTGGTTCTAAATCTA+TGG | 0.332083 | 1_1:+74333208 | Msa0043230:CDS |
| CACTGTGCTCTGGGATTCTA+TGG | 0.332419 | 1_1:+74333915 | Msa0043230:CDS |
| GCGACAAGACAGTGAAAATC+TGG | 0.332615 | 1_1:+74337811 | Msa0043230:CDS |
| AATGCTTTGTGGTTGATAAC+AGG | 0.332640 | 1_1:-74333799 | None:intergenic |
| AATAGTGAACAACGTTTCTT+GGG | 0.344542 | 1_1:+74332275 | Msa0043230:CDS |
| TGGCGACAAAGATACCTTTC+CGG | 0.344773 | 1_1:-74333330 | None:intergenic |
| GAATAGTGAACAACGTTTCT+TGG | 0.352990 | 1_1:+74332274 | Msa0043230:CDS |
| GTAGAGGCATGACATATAAA+AGG | 0.354208 | 1_1:-74338065 | None:intergenic |
| TGTATACACAGCAAAAGAAT+TGG | 0.356030 | 1_1:+74332734 | Msa0043230:intron |
| ACATGAGGATTGGGTATATT+CGG | 0.356150 | 1_1:+74333734 | Msa0043230:CDS |
| GAAGAAGAAGAAAGAGAATT+GGG | 0.356740 | 1_1:-74332125 | None:intergenic |
| GGCTTTGGCAGGTTGGTTCA+TGG | 0.357324 | 1_1:+74336981 | Msa0043230:CDS |
| ATTCCATCATTTCTTCGATT+GGG | 0.357838 | 1_1:-74337924 | None:intergenic |
| GCTGTCACACTACTCGTAAA+TGG | 0.364831 | 1_1:-74337882 | None:intergenic |
| AGTAACCTTGGGGTTGAAAA+TGG | 0.365919 | 1_1:-74332340 | None:intergenic |
| TGGCAGCCTGAAAAGACTTC+TGG | 0.377252 | 1_1:+74333855 | Msa0043230:CDS |
| CCTGAATCACATAAACTCTA+TGG | 0.383126 | 1_1:+74336566 | Msa0043230:CDS |
| GTGAACCTGTTGCAAATTCA+TGG | 0.386968 | 1_1:-74337788 | None:intergenic |
| GCTTGTTGCTTCTTCATGTA+AGG | 0.391628 | 1_1:+74336634 | Msa0043230:CDS |
| CTACTGCTGTGGCAGAAGTA+TGG | 0.394606 | 1_1:+74336960 | Msa0043230:CDS |
| TATGACAGTTGTTCATAGTA+AGG | 0.395282 | 1_1:+74335023 | Msa0043230:CDS |
| CTAAAATTGAATCTCCATTT+GGG | 0.396876 | 1_1:-74333950 | None:intergenic |
| AAGAAGGAGTTGAAGTGAAA+AGG | 0.398466 | 1_1:+74332226 | Msa0043230:CDS |
| CGAACTAAGCCACTGTGCTC+TGG | 0.400762 | 1_1:+74333905 | Msa0043230:CDS |
| TTCTGCCACAGCAGTAGATT+GGG | 0.401219 | 1_1:-74336954 | None:intergenic |
| ACAGAGGGCAGCGAGATTAT+CGG | 0.406256 | 1_1:-74332177 | None:intergenic |
| TACATTCATGTGAGCTAAAA+GGG | 0.406622 | 1_1:+74333457 | Msa0043230:CDS |
| AATTCCATCATTTCTTCGAT+TGG | 0.407892 | 1_1:-74337925 | None:intergenic |
| ACCTCCAATTGAAGATCAAC+TGG | 0.411643 | 1_1:+74336526 | Msa0043230:CDS |
| TCTGATACAAATGGGGTTGA+TGG | 0.415325 | 1_1:+74336452 | Msa0043230:CDS |
| CTTCTGCCACAGCAGTAGAT+TGG | 0.418879 | 1_1:-74336955 | None:intergenic |
| ATTGCGCGGCCTCAGGTTCA+TGG | 0.422152 | 1_1:+74334985 | Msa0043230:CDS |
| TGGGATTCTATGGTGGTCAT+TGG | 0.423535 | 1_1:+74333925 | Msa0043230:CDS |
| TTATAGTCTTCTTGCGAGGC+AGG | 0.424206 | 1_1:+74337719 | Msa0043230:CDS |
| AGAAGGAGTTGAAGTGAAAA+GGG | 0.425565 | 1_1:+74332227 | Msa0043230:CDS |
| TCTTTATGCTGTGATCATAA+GGG | 0.426565 | 1_1:+74336608 | Msa0043230:CDS |
| TTATCGATGGCGGAATTGCC+TGG | 0.427069 | 1_1:+74333236 | Msa0043230:CDS |
| GTTAGCATACCTATACCTAT+AGG | 0.427291 | 1_1:-74338258 | None:intergenic |
| GAAGAGCCAGCCACAAGGAC+AGG | 0.427978 | 1_1:-74333675 | None:intergenic |
| TCATTACCTGTAAGCATCAA+TGG | 0.428341 | 1_1:+74333510 | Msa0043230:CDS |
| TGGGAACTGTCCCTTGTTGA+TGG | 0.428999 | 1_1:+74332804 | Msa0043230:CDS |
| TACCACAATCCCACAAGAAA+GGG | 0.429846 | 1_1:+74332947 | Msa0043230:CDS |
| GTATGAGATTGCGCGGCCTC+AGG | 0.431270 | 1_1:+74334978 | Msa0043230:CDS |
| AGCTAAAAGGGCATACAGAT+TGG | 0.432748 | 1_1:+74333469 | Msa0043230:CDS |
| TACAAATGGGGTTGATGGTC+TGG | 0.434125 | 1_1:+74336457 | Msa0043230:CDS |
| GAAGTATGGCTTTGGCAGGT+TGG | 0.434435 | 1_1:+74336974 | Msa0043230:CDS |
| AAGGACAGGACCTTCTATAT+AGG | 0.435333 | 1_1:-74333661 | None:intergenic |
| AACTGGCATGGCACACACTT+TGG | 0.435584 | 1_1:+74336543 | Msa0043230:CDS |
| TTTGATTGGACATGAGGATT+GGG | 0.435859 | 1_1:+74333725 | Msa0043230:CDS |
| CATGAGACCTCTGATACAAA+TGG | 0.436275 | 1_1:+74336443 | Msa0043230:CDS |
| CTGTATATGCCATTCCCGTT+TGG | 0.438205 | 1_1:-74333615 | None:intergenic |
| GAAGGTCCTGTCCTTGTGGC+TGG | 0.439711 | 1_1:+74333669 | Msa0043230:CDS |
| GAAGTGAAAAGGGTATTCAT+TGG | 0.440981 | 1_1:+74332237 | Msa0043230:CDS |
| AGGGACACAAGCGGATTATC+TGG | 0.442277 | 1_1:+74337742 | Msa0043230:CDS |
| ATGAGACCTCTGATACAAAT+GGG | 0.444909 | 1_1:+74336444 | Msa0043230:CDS |
| CACGGCCATGAATTTGCAAC+AGG | 0.445611 | 1_1:+74337783 | Msa0043230:CDS |
| AGATGGTACTGTTTGTATAT+GGG | 0.448027 | 1_1:+74333032 | Msa0043230:CDS |
| GGGCGACGGCGATGATGGTT+GGG | 0.449048 | 1_1:-74332156 | None:intergenic |
| AAAGGGGTTACATGTATTGA+TGG | 0.450575 | 1_1:+74332964 | Msa0043230:CDS |
| CAAACGGGAATGGCATATAC+AGG | 0.452267 | 1_1:+74333616 | Msa0043230:CDS |
| CAGAGGGCAGCGAGATTATC+GGG | 0.452299 | 1_1:-74332176 | None:intergenic |
| ACATGTAACCCCTTTCTTGT+GGG | 0.452970 | 1_1:-74332956 | None:intergenic |
| CGTCCTTGCAATGGGAGGAT+TGG | 0.455070 | 1_1:+74333274 | Msa0043230:CDS |
| AACACAGTTGGAACTGCGTC+GGG | 0.458249 | 1_1:-74336497 | None:intergenic |
| ATTGGGTATATTCGGTTGAA+TGG | 0.458591 | 1_1:+74333742 | Msa0043230:CDS |
| GGTGGTCATTGGAGCCCAAA+TGG | 0.468423 | 1_1:+74333936 | Msa0043230:CDS |
| CCTAAAATTTCCCACAGTAC+CGG | 0.472671 | 1_1:-74332066 | None:intergenic |
| GGTGCAAATATGTCAGCTCT+TGG | 0.475040 | 1_1:+74335189 | Msa0043230:CDS |
| GTGTTTACAATCACAACAAC+AGG | 0.476242 | 1_1:+74337109 | Msa0043230:CDS |
| ATTGGGTCAGTCAGTGTTAG+TGG | 0.477302 | 1_1:-74332108 | None:intergenic |
| CTCCCCAATCGAAGAAATGA+TGG | 0.478352 | 1_1:+74337921 | Msa0043230:CDS |
| TACGTAGCTCCGTGCCAAAC+GGG | 0.479132 | 1_1:+74333601 | Msa0043230:CDS |
| AGGCAATTCCGCCATCGATA+AGG | 0.479680 | 1_1:-74333234 | None:intergenic |
| TGACAACTGGCTTACACAAA+AGG | 0.480622 | 1_1:+74334019 | Msa0043230:CDS |
| CATGCCAGTTGATCTTCAAT+TGG | 0.481967 | 1_1:-74336530 | None:intergenic |
| GATATAGCATGGGCTAGATC+TGG | 0.482923 | 1_1:+74334071 | Msa0043230:CDS |
| CGGGCGACGGCGATGATGGT+TGG | 0.484590 | 1_1:-74332157 | None:intergenic |
| TGGACAAGACTATGATGATC+TGG | 0.487149 | 1_1:+74333835 | Msa0043230:CDS |
| GTACCACAATCCCACAAGAA+AGG | 0.487530 | 1_1:+74332946 | Msa0043230:CDS |
| CTTCCGTGGATGCAACCAAA+GGG | 0.488239 | 1_1:-74333770 | None:intergenic |
| AGAGAAACCTCGACTTTCCA+TGG | 0.491446 | 1_1:-74334937 | None:intergenic |
| AATTATGGTTTCTCAAACTG+AGG | 0.493661 | 1_1:+74332987 | Msa0043230:CDS |
| GGATGGAAGCATTGTAGTAC+CGG | 0.495177 | 1_1:+74338010 | Msa0043230:CDS |
| ACAAGATTCACCTTTACTGC+GGG | 0.496063 | 1_1:+74333300 | Msa0043230:CDS |
| CTGTGTCACTGTTAAGCTAT+GGG | 0.496668 | 1_1:-74337026 | None:intergenic |
| CAACTAGAATTTATGCTCCA+TGG | 0.497145 | 1_1:+74334920 | Msa0043230:CDS |
| TGATGAAGATTTCTTCTCTA+CGG | 0.497228 | 1_1:-74337835 | None:intergenic |
| TTACGTAGCTCCGTGCCAAA+CGG | 0.497618 | 1_1:+74333600 | Msa0043230:CDS |
| ACCCCTTTCTTGTGGGATTG+TGG | 0.499253 | 1_1:-74332949 | None:intergenic |
| CTAGCTGTTGGAATGGAAAA+CGG | 0.499403 | 1_1:+74337948 | Msa0043230:CDS |
| GTAGTGTGACAGCATTGTCT+TGG | 0.501252 | 1_1:+74337892 | Msa0043230:CDS |
| AGCTTATCATCCTATATAGA+AGG | 0.501427 | 1_1:+74333651 | Msa0043230:CDS |
| TGATTGTAAACACAGAGAAC+TGG | 0.501451 | 1_1:-74337099 | None:intergenic |
| CTGTCATACAATTTATATCA+TGG | 0.501729 | 1_1:-74335008 | None:intergenic |
| TCTGTGTCACTGTTAAGCTA+TGG | 0.504079 | 1_1:-74337027 | None:intergenic |
| CTCTTCAAGATGGAGAGTCT+TGG | 0.504927 | 1_1:+74334956 | Msa0043230:CDS |
| TACATGTAACCCCTTTCTTG+TGG | 0.505650 | 1_1:-74332957 | None:intergenic |
| GGTCAAATCGTCCTTGCAAT+GGG | 0.506094 | 1_1:+74333266 | Msa0043230:CDS |
| GCCAGTTGATCTTCAATTGG+AGG | 0.508620 | 1_1:-74336527 | None:intergenic |
| AAGACTATAACTAATTTCAC+TGG | 0.509024 | 1_1:-74337706 | None:intergenic |
| GTCGAGGTTTCTCTTCAAGA+TGG | 0.509924 | 1_1:+74334946 | Msa0043230:CDS |
| AAAATGTTGGTGATGACAAC+TGG | 0.510399 | 1_1:+74334006 | Msa0043230:CDS |
| CTGTGGCAGAAGTATGGCTT+TGG | 0.512071 | 1_1:+74336966 | Msa0043230:CDS |
| TGACTGTAAATTATCATGCC+TGG | 0.515474 | 1_1:+74333178 | Msa0043230:CDS |
| AATGATGGAATTCTAGCTGT+TGG | 0.518192 | 1_1:+74337936 | Msa0043230:CDS |
| GGCAGAAGTATGGCTTTGGC+AGG | 0.518853 | 1_1:+74336970 | Msa0043230:CDS |
| TAGTGTGACAGCATTGTCTT+GGG | 0.519272 | 1_1:+74337893 | Msa0043230:CDS |
| TTTGCATCTACTTCTTCAGA+TGG | 0.519491 | 1_1:+74333015 | Msa0043230:CDS |
| GAACTAAGCCACTGTGCTCT+GGG | 0.520247 | 1_1:+74333906 | Msa0043230:CDS |
| AGCTCCGTGCCAAACGGGAA+TGG | 0.521165 | 1_1:+74333606 | Msa0043230:CDS |
| CCTTTGGTTGCATCCACGGA+AGG | 0.522914 | 1_1:+74333771 | Msa0043230:CDS |
| ATGACAGTTGTTCATAGTAA+GGG | 0.523352 | 1_1:+74335024 | Msa0043230:CDS |
| ATAATAATGCATATCGAAGA+AGG | 0.523952 | 1_1:+74332210 | Msa0043230:exon |
| ATAACAGGCTTCCCCTTCCG+TGG | 0.525346 | 1_1:-74333784 | None:intergenic |
| TTCCATCATTTCTTCGATTG+GGG | 0.526646 | 1_1:-74337923 | None:intergenic |
| AGTCTACAACTTGCTTCTTG+TGG | 0.530154 | 1_1:+74338131 | Msa0043230:CDS |
| TTGCTATCTGGAGATGCTGA+TGG | 0.531360 | 1_1:+74332768 | Msa0043230:CDS |
| TGGTCAAATCGTCCTTGCAA+TGG | 0.532210 | 1_1:+74333265 | Msa0043230:CDS |
| AAGGGCATACAGATTGGATC+CGG | 0.534028 | 1_1:+74333475 | Msa0043230:CDS |
| TGCCTCTACAGTAAACCGTC+TGG | 0.535874 | 1_1:+74338079 | Msa0043230:CDS |
| TTTGGTTGCATCCACGGAAG+GGG | 0.535971 | 1_1:+74333773 | Msa0043230:CDS |
| AAAAGGGTATTCATTGGAGC+AGG | 0.536530 | 1_1:+74332243 | Msa0043230:CDS |
| TCACATAAACTCTATGGCCA+TGG | 0.537110 | 1_1:+74336572 | Msa0043230:CDS |
| ATAATCTCGCTGCCCTCTGT+CGG | 0.545530 | 1_1:+74332180 | Msa0043230:five_prime_UTR |
| GTGACAGCATTGTCTTGGGT+TGG | 0.548956 | 1_1:+74337897 | Msa0043230:CDS |
| TTATCGGGCGACGGCGATGA+TGG | 0.549316 | 1_1:-74332161 | None:intergenic |
| GGAGGTTCAGTAAACACAGT+TGG | 0.549347 | 1_1:-74336509 | None:intergenic |
| GATGCAGATAAAATGCTTTG+TGG | 0.550954 | 1_1:-74333810 | None:intergenic |
| CTACAGTAAACCGTCTGGCA+TGG | 0.553191 | 1_1:+74338084 | Msa0043230:CDS |
| CTTTGGTTGCATCCACGGAA+GGG | 0.553868 | 1_1:+74333772 | Msa0043230:CDS |
| AGAAGAGCAGCGGCGAAACC+CGG | 0.555080 | 1_1:-74338029 | None:intergenic |
| CATCAGCTCCGCCAACAAAA+CGG | 0.556187 | 1_1:-74335053 | None:intergenic |
| CCTTCCGTGGATGCAACCAA+AGG | 0.557493 | 1_1:-74333771 | None:intergenic |
| CATCGGTGACTGATATAGCA+TGG | 0.557572 | 1_1:+74334060 | Msa0043230:CDS |
| ATGCATACGAATTTGGAAGA+TGG | 0.561651 | 1_1:+74333575 | Msa0043230:CDS |
| AAGAAAATAGCTCATTTCCA+TGG | 0.561954 | 1_1:-74336589 | None:intergenic |
| TATCCAATCCTCCCATTGCA+AGG | 0.562834 | 1_1:-74333277 | None:intergenic |
| TGATGGTGCTATTATTCTAT+GGG | 0.564507 | 1_1:+74332785 | Msa0043230:CDS |
| GGGAACTGTCCCTTGTTGAT+GGG | 0.565491 | 1_1:+74332805 | Msa0043230:CDS |
| GTTGGTTCATGGAAAGCAGT+TGG | 0.566583 | 1_1:+74336992 | Msa0043230:CDS |
| TATGCCATTCCCGTTTGGCA+CGG | 0.567694 | 1_1:-74333610 | None:intergenic |
| TGCCAGACGGTTTACTGTAG+AGG | 0.573011 | 1_1:-74338081 | None:intergenic |
| TATAGAAGGTCCTGTCCTTG+TGG | 0.573054 | 1_1:+74333665 | Msa0043230:CDS |
| CTTACACAAAAGGTTCCCTC+TGG | 0.573072 | 1_1:+74334029 | Msa0043230:CDS |
| TGGAATTCTAGCTGTTGGAA+TGG | 0.578033 | 1_1:+74337941 | Msa0043230:CDS |
| TACCATAGATTTAGAACCAA+CGG | 0.580301 | 1_1:-74333210 | None:intergenic |
| ATCAACCCCATTTGTATCAG+AGG | 0.580402 | 1_1:-74336450 | None:intergenic |
| CGACAAGACAGTGAAAATCT+GGG | 0.588108 | 1_1:+74337812 | Msa0043230:CDS |
| AAACACAGTTGGAACTGCGT+CGG | 0.588864 | 1_1:-74336498 | None:intergenic |
| GATCATCATAGTCTTGTCCA+TGG | 0.589029 | 1_1:-74333832 | None:intergenic |
| TAGTCTTCTTGCGAGGCAGG+AGG | 0.589362 | 1_1:+74337722 | Msa0043230:CDS |
| TGCGTCGGGAACAGTTTCAA+AGG | 0.592159 | 1_1:-74336483 | None:intergenic |
| ACTGTCCCTTGTTGATGGGA+AGG | 0.592872 | 1_1:+74332809 | Msa0043230:CDS |
| TATTATCACAGCTCCGACAG+AGG | 0.597124 | 1_1:-74332193 | None:intergenic |
| AGCTTTGTGACCAGGAAGAG+TGG | 0.598753 | 1_1:-74332446 | None:intergenic |
| ACGATTTGACCACTACATCC+AGG | 0.600975 | 1_1:-74333254 | None:intergenic |
| TCCTATAACAGACAAGAGGA+TGG | 0.602584 | 1_1:+74337993 | Msa0043230:CDS |
| TGACAGTTGTTCATAGTAAG+GGG | 0.603153 | 1_1:+74335025 | Msa0043230:CDS |
| TATATCAGCTAGCCATGACC+AGG | 0.603806 | 1_1:+74334103 | Msa0043230:CDS |
| TCTGGCATGGAGGAAAATTG+AGG | 0.604356 | 1_1:+74338097 | Msa0043230:CDS |
| TTGGGTCAGTCAGTGTTAGT+GGG | 0.604464 | 1_1:-74332107 | None:intergenic |
| AGTCTTCTTGCGAGGCAGGA+GGG | 0.605997 | 1_1:+74337723 | Msa0043230:CDS |
| ATCGGTGACTGATATAGCAT+GGG | 0.610638 | 1_1:+74334061 | Msa0043230:CDS |
| ACCTGTAAGCATCAATGGAG+AGG | 0.613920 | 1_1:+74333515 | Msa0043230:CDS |
| CGAGGCAGGAGGGACACAAG+CGG | 0.615848 | 1_1:+74337733 | Msa0043230:CDS |
| TAGCTTAACAGTGACACAGA+TGG | 0.618590 | 1_1:+74337030 | Msa0043230:CDS |
| TGGATGAATGTGGTTACTGT+TGG | 0.619332 | 1_1:+74333882 | Msa0043230:CDS |
| ATTATCACAGCTCCGACAGA+GGG | 0.620979 | 1_1:-74332192 | None:intergenic |
| GCGGAATTGCCTGGATGTAG+TGG | 0.621195 | 1_1:+74333245 | Msa0043230:CDS |
| AAGAAGAAGAGCCAGCCACA+AGG | 0.621956 | 1_1:-74333680 | None:intergenic |
| AAGATTCACCTTTACTGCGG+GGG | 0.621967 | 1_1:+74333302 | Msa0043230:CDS |
| TTATGCTCCATGGAAAGTCG+AGG | 0.623529 | 1_1:+74334930 | Msa0043230:CDS |
| GCAGCGAGATTATCGGGCGA+CGG | 0.623846 | 1_1:-74332170 | None:intergenic |
| TCCGTGGATGCAACCAAAGG+GGG | 0.625596 | 1_1:-74333768 | None:intergenic |
| GTACTTCCACTGACGAGTAG+TGG | 0.627306 | 1_1:+74333060 | Msa0043230:CDS |
| GCAGGCCCAATCTACTGCTG+TGG | 0.627705 | 1_1:+74336949 | Msa0043230:intron |
| CAATTGAAGATCAACTGGCA+TGG | 0.629052 | 1_1:+74336531 | Msa0043230:CDS |
| TTAAGCTATGGGATTGCAAG+CGG | 0.629501 | 1_1:-74337015 | None:intergenic |
| CAAATCGTCCTTGCAATGGG+AGG | 0.631304 | 1_1:+74333269 | Msa0043230:CDS |
| AACAAGATTCACCTTTACTG+CGG | 0.631780 | 1_1:+74333299 | Msa0043230:CDS |
| ATCTATGGTAGCCTTATCGA+TGG | 0.631961 | 1_1:+74333223 | Msa0043230:CDS |
| TTTCAAGAGGAACAGAAACA+GGG | 0.633274 | 1_1:-74338289 | None:intergenic |
| TGTGCTCTGGGATTCTATGG+TGG | 0.635038 | 1_1:+74333918 | Msa0043230:CDS |
| ATAACAAGACTTCTGCAAAG+TGG | 0.637064 | 1_1:-74335133 | None:intergenic |
| GATGGAAGCATTGTAGTACC+GGG | 0.637075 | 1_1:+74338011 | Msa0043230:CDS |
| GGCTTACCACTACTCGTCAG+TGG | 0.637295 | 1_1:-74333066 | None:intergenic |
| AAAACGGCCAAATAGAGTTG+TGG | 0.638326 | 1_1:+74337964 | Msa0043230:CDS |
| AGTCTTGGTATGAGATTGCG+CGG | 0.641165 | 1_1:+74334971 | Msa0043230:CDS |
| GATGTACCTTCCCATCAACA+AGG | 0.642227 | 1_1:-74332815 | None:intergenic |
| ACCGATGCAAAATGACCAGA+GGG | 0.642490 | 1_1:-74334044 | None:intergenic |
| GTTGCAAATTCATGGCCGTG+TGG | 0.643567 | 1_1:-74337780 | None:intergenic |
| CTGAAAAGACTTCTGGTGTG+TGG | 0.643767 | 1_1:+74333862 | Msa0043230:CDS |
| TCATGTTCTTGGAACCCACA+CGG | 0.651148 | 1_1:+74337765 | Msa0043230:CDS |
| CTTGGGGTTGAAAATGGCGA+CGG | 0.653338 | 1_1:-74332334 | None:intergenic |
| ACCACAATCCCACAAGAAAG+GGG | 0.653351 | 1_1:+74332948 | Msa0043230:CDS |
| ATATCATGGCCATGAACCTG+AGG | 0.654048 | 1_1:-74334994 | None:intergenic |
| TTGCAAATTCATGGCCGTGT+GGG | 0.657111 | 1_1:-74337779 | None:intergenic |
| CAGTAAACCGTCTGGCATGG+AGG | 0.660516 | 1_1:+74338087 | Msa0043230:CDS |
| TTCCGTGGATGCAACCAAAG+GGG | 0.666647 | 1_1:-74333769 | None:intergenic |
| TCTGTCCTATAACAGACAAG+AGG | 0.667351 | 1_1:+74337989 | Msa0043230:CDS |
| CACCGATGCAAAATGACCAG+AGG | 0.669482 | 1_1:-74334045 | None:intergenic |
| TACGCGAACAAGAAGAGCAG+CGG | 0.669620 | 1_1:-74338039 | None:intergenic |
| TTAGTTATAGTCTTCTTGCG+AGG | 0.676218 | 1_1:+74337715 | Msa0043230:CDS |
| GTAATGAGAAGTCCAAACTC+CGG | 0.676979 | 1_1:-74333494 | None:intergenic |
| CAAGATTCACCTTTACTGCG+GGG | 0.678899 | 1_1:+74333301 | Msa0043230:CDS |
| AAACGGGAATGGCATATACA+GGG | 0.680280 | 1_1:+74333617 | Msa0043230:CDS |
| TTCTGGTGTGTGGATGAATG+TGG | 0.682155 | 1_1:+74333872 | Msa0043230:CDS |
| ATAGTGAACAACGTTTCTTG+GGG | 0.684400 | 1_1:+74332276 | Msa0043230:CDS |
| TATGGTAGCCTTATCGATGG+CGG | 0.688793 | 1_1:+74333226 | Msa0043230:CDS |
| ATGTACCTTCCCATCAACAA+GGG | 0.699218 | 1_1:-74332814 | None:intergenic |
| GTCACACTACTCGTAAATGG+AGG | 0.699933 | 1_1:-74337879 | None:intergenic |
| TGAGACCTCTGATACAAATG+GGG | 0.710699 | 1_1:+74336445 | Msa0043230:CDS |
| CGGGAATGGCATATACAGGG+AGG | 0.738065 | 1_1:+74333620 | Msa0043230:CDS |
| CATAGAATCCCAGAGCACAG+TGG | 0.755507 | 1_1:-74333914 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGATCATTTTTTTTTTT+TGG | + | chr1_1:74337195-74337214 | Msa0043230:intron | 10.0% |
| !! | GAAACAAAAATTAAAGATAA+AGG | - | chr1_1:74332379-74332398 | None:intergenic | 15.0% |
| !! | AATCATCAATAACATTATTA+GGG | - | chr1_1:74332697-74332716 | None:intergenic | 15.0% |
| !! | TAATCATCAATAACATTATT+AGG | - | chr1_1:74332698-74332717 | None:intergenic | 15.0% |
| !! | ATGTTAGTAATCTATAATTA+TGG | - | chr1_1:74333353-74333372 | None:intergenic | 15.0% |
| !! | TATCTGTTAATTTATCTATT+AGG | + | chr1_1:74334173-74334192 | Msa0043230:intron | 15.0% |
| !! | TTTAATTAGTTGTATAAACT+TGG | + | chr1_1:74334802-74334821 | Msa0043230:intron | 15.0% |
| !! | AAATACTTGAATAAAACTAT+TGG | + | chr1_1:74335413-74335432 | Msa0043230:intron | 15.0% |
| !! | TAAATAGGATACAATAATAT+AGG | + | chr1_1:74335561-74335580 | Msa0043230:intron | 15.0% |
| !! | AAATAGGATACAATAATATA+GGG | + | chr1_1:74335562-74335581 | Msa0043230:intron | 15.0% |
| !! | AATTAATGTATATCAAATGT+TGG | - | chr1_1:74336813-74336832 | None:intergenic | 15.0% |
| !! | TACAGATATATCAAAAAATA+AGG | - | chr1_1:74338218-74338237 | None:intergenic | 15.0% |
| !!! | TAATAATTCATATTTTCAAG+AGG | - | chr1_1:74338305-74338324 | None:intergenic | 15.0% |
| !!! | TTCCTTATAGTTTTCTTTTT+GGG | + | chr1_1:74333383-74333402 | Msa0043230:intron | 20.0% |
| !!! | ATGATGTATTTTTAAATACC+TGG | - | chr1_1:74334124-74334143 | None:intergenic | 20.0% |
| !!! | AGACATTTTCGAATTATAAA+AGG | - | chr1_1:74334220-74334239 | None:intergenic | 20.0% |
| !! | TAGATGATCTATTAACTTAT+TGG | + | chr1_1:74334649-74334668 | Msa0043230:intron | 20.0% |
| !!! | TTTAAAATGCCACATTTTAT+TGG | + | chr1_1:74334705-74334724 | Msa0043230:intron | 20.0% |
| !! | TTATACAACTAATTAAACCA+TGG | - | chr1_1:74334799-74334818 | None:intergenic | 20.0% |
| !!! | AACGTTTTCAAAAATGATAA+TGG | - | chr1_1:74335105-74335124 | None:intergenic | 20.0% |
| !!! | TTTTTTATGTGACAAATAAC+AGG | + | chr1_1:74335271-74335290 | Msa0043230:intron | 20.0% |
| !! | AATAGGATACAATAATATAG+GGG | + | chr1_1:74335563-74335582 | Msa0043230:intron | 20.0% |
| !!! | TCTTTTCAATTCAATTTCTT+TGG | + | chr1_1:74336140-74336159 | Msa0043230:intron | 20.0% |
| !! | TAACATCAGAAAATAAAACA+CGG | - | chr1_1:74336327-74336346 | None:intergenic | 20.0% |
| !! | AAACAATTATATATCTGTTC+TGG | + | chr1_1:74336361-74336380 | Msa0043230:intron | 20.0% |
| !! | ATAAATAATTTATGCATTGC+AGG | + | chr1_1:74336931-74336950 | Msa0043230:intron | 20.0% |
| !! | AAATACTAATCACTTAATTG+TGG | + | chr1_1:74337673-74337692 | Msa0043230:intron | 20.0% |
| !!! | GAATATTTTTTTACTCCTAT+AGG | + | chr1_1:74338243-74338262 | Msa0043230:three_prime_UTR | 20.0% |
| !!! | TGAAGTATTTTTTGCTAAAT+AGG | + | chr1_1:74338339-74338358 | Msa0043230:three_prime_UTR | 20.0% |
| ! | ATAATAATGCATATCGAAGA+AGG | + | chr1_1:74332210-74332229 | Msa0043230:exon | 25.0% |
| !!! | TGAATAGAAATTTGCTACTT+GGG | - | chr1_1:74332495-74332514 | None:intergenic | 25.0% |
| !!! | TTGAATAGAAATTTGCTACT+TGG | - | chr1_1:74332496-74332515 | None:intergenic | 25.0% |
| ! | AGTAGCAAATTTCTATTCAA+AGG | + | chr1_1:74332496-74332515 | Msa0043230:intron | 25.0% |
| !! | ATCATAGAGAGTATAGAATT+TGG | + | chr1_1:74332563-74332582 | Msa0043230:intron | 25.0% |
| !! | ACTTGATAGCTTTCATTTAA+TGG | + | chr1_1:74332872-74332891 | Msa0043230:intron | 25.0% |
| !!! | TCTATTTTTTGCGTTTATAG+TGG | + | chr1_1:74332908-74332927 | Msa0043230:intron | 25.0% |
| !! | TACATGTATTGATGGAATTA+TGG | + | chr1_1:74332972-74332991 | Msa0043230:CDS | 25.0% |
| ! | ATAACAGTAAACATTGTCAT+TGG | - | chr1_1:74333100-74333119 | None:intergenic | 25.0% |
| !! | GTTCCTTATAGTTTTCTTTT+TGG | + | chr1_1:74333382-74333401 | Msa0043230:intron | 25.0% |
| !! | AGAGGTAAACAATATTTTTC+TGG | + | chr1_1:74333533-74333552 | Msa0043230:CDS | 25.0% |
| ! | CTAAAATTGAATCTCCATTT+GGG | - | chr1_1:74333953-74333972 | None:intergenic | 25.0% |
| !!! | TATTTTTAAATACCTGGTCA+TGG | - | chr1_1:74334118-74334137 | None:intergenic | 25.0% |
| !! | AATCTATAGTAAAGCTTTTG+TGG | - | chr1_1:74334152-74334171 | None:intergenic | 25.0% |
| ! | TGCGTAGATAAACAAAAAAA+GGG | - | chr1_1:74334598-74334617 | None:intergenic | 25.0% |
| ! | ATGCGTAGATAAACAAAAAA+AGG | - | chr1_1:74334599-74334618 | None:intergenic | 25.0% |
| !! | GTGGCATTTTAAACATTTTT+AGG | - | chr1_1:74334698-74334717 | None:intergenic | 25.0% |
| ! | TTGTCATTACCAATAAAATG+TGG | - | chr1_1:74334717-74334736 | None:intergenic | 25.0% |
| ! | CTGTCATACAATTTATATCA+TGG | - | chr1_1:74335011-74335030 | None:intergenic | 25.0% |
| ! | TCAACAAATTAACTAACCTT+GGG | - | chr1_1:74335238-74335257 | None:intergenic | 25.0% |
| ! | TTCAACAAATTAACTAACCT+TGG | - | chr1_1:74335239-74335258 | None:intergenic | 25.0% |
| ! | ACTTGAATAAAACTATTGGT+TGG | + | chr1_1:74335417-74335436 | Msa0043230:intron | 25.0% |
| ! | TAGTAAATAGTTACAGCTTA+TGG | + | chr1_1:74335454-74335473 | Msa0043230:intron | 25.0% |
| ! | TAAAGGTGAATTAGTAGTTA+AGG | + | chr1_1:74335505-74335524 | Msa0043230:intron | 25.0% |
| ! | TAGGAATATTGTGTGTAAAT+AGG | + | chr1_1:74335546-74335565 | Msa0043230:intron | 25.0% |
| !! | TATTTCACATAGCGTATTTT+TGG | + | chr1_1:74336034-74336053 | Msa0043230:intron | 25.0% |
| !! | ACTTTTTATTAACAGCTGTT+AGG | - | chr1_1:74336168-74336187 | None:intergenic | 25.0% |
| ! | TAATAAAAAGTTACGAGAGT+TGG | + | chr1_1:74336177-74336196 | Msa0043230:intron | 25.0% |
| ! | AATAAAAAGTTACGAGAGTT+GGG | + | chr1_1:74336178-74336197 | Msa0043230:intron | 25.0% |
| ! | AACATCAGAAAATAAAACAC+GGG | - | chr1_1:74336326-74336345 | None:intergenic | 25.0% |
| ! | ATCCTCAAATTTACAAACTT+TGG | - | chr1_1:74336400-74336419 | None:intergenic | 25.0% |
| ! | ATCTTTCTGTCAAATTATAC+AGG | - | chr1_1:74336685-74336704 | None:intergenic | 25.0% |
| !! | TCTTACAATTTTCTTGACTA+TGG | + | chr1_1:74336730-74336749 | Msa0043230:intron | 25.0% |
| !!! | GAAAAAAGAGCATTAGAAAT+TGG | - | chr1_1:74336791-74336810 | None:intergenic | 25.0% |
| ! | TACATTAATTTCAACCAACT+TGG | + | chr1_1:74336823-74336842 | Msa0043230:intron | 25.0% |
| !! | GCTGATATTTCTACATTATT+TGG | + | chr1_1:74336898-74336917 | Msa0043230:intron | 25.0% |
| ! | TCATAATAGTAATGCAGAAA+AGG | - | chr1_1:74337181-74337200 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGGTGACTTTCTT+TGG | + | chr1_1:74337208-74337227 | Msa0043230:intron | 25.0% |
| !! | ATTAAGTTGTTCATTCAAAC+AGG | + | chr1_1:74337575-74337594 | Msa0043230:intron | 25.0% |
| !! | TTAAGTTGTTCATTCAAACA+GGG | + | chr1_1:74337576-74337595 | Msa0043230:intron | 25.0% |
| ! | AAGACTATAACTAATTTCAC+TGG | - | chr1_1:74337709-74337728 | None:intergenic | 25.0% |
| !!! | TTTTTTACTCCTATAGGTAT+AGG | + | chr1_1:74338249-74338268 | Msa0043230:three_prime_UTR | 25.0% |
| ! | TTAGCAAAAAATACTTCATG+TGG | - | chr1_1:74338337-74338356 | None:intergenic | 25.0% |
| GAAGAAGAAGAAAGAGAATT+GGG | - | chr1_1:74332128-74332147 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAAAGAGAAT+TGG | - | chr1_1:74332129-74332148 | None:intergenic | 30.0% | |
| AATAGTGAACAACGTTTCTT+GGG | + | chr1_1:74332275-74332294 | Msa0043230:CDS | 30.0% | |
| AAGATAAAGGATGAGTGAAA+AGG | - | chr1_1:74332366-74332385 | None:intergenic | 30.0% | |
| GTACACTATATAAGTGCTTA+TGG | + | chr1_1:74332518-74332537 | Msa0043230:intron | 30.0% | |
| AGATTGTTTGAGAGAGTTTA+TGG | - | chr1_1:74332624-74332643 | None:intergenic | 30.0% | |
| TGTGTATACAAAGTAAGAGA+GGG | - | chr1_1:74332724-74332743 | None:intergenic | 30.0% | |
| TGTATACACAGCAAAAGAAT+TGG | + | chr1_1:74332734-74332753 | Msa0043230:intron | 30.0% | |
| !! | TGATGGTGCTATTATTCTAT+GGG | + | chr1_1:74332785-74332804 | Msa0043230:CDS | 30.0% |
| !!! | ATTTTTTGCGTTTATAGTGG+AGG | + | chr1_1:74332911-74332930 | Msa0043230:intron | 30.0% |
| AATTATGGTTTCTCAAACTG+AGG | + | chr1_1:74332987-74333006 | Msa0043230:CDS | 30.0% | |
| AGATGGTACTGTTTGTATAT+GGG | + | chr1_1:74333032-74333051 | Msa0043230:CDS | 30.0% | |
| ACATTGTCATTGGAAAAGTA+GGG | - | chr1_1:74333090-74333109 | None:intergenic | 30.0% | |
| AACATTGTCATTGGAAAAGT+AGG | - | chr1_1:74333091-74333110 | None:intergenic | 30.0% | |
| GATATTTAGTCCATCATTCT+AGG | + | chr1_1:74333155-74333174 | Msa0043230:intron | 30.0% | |
| ! | TACCATAGATTTAGAACCAA+CGG | - | chr1_1:74333213-74333232 | None:intergenic | 30.0% |
| CTCCCAAAAAGAAAACTATA+AGG | - | chr1_1:74333388-74333407 | None:intergenic | 30.0% | |
| ! | ATAGGCAGAAGAAAAAGTAT+AGG | - | chr1_1:74333425-74333444 | None:intergenic | 30.0% |
| TACATTCATGTGAGCTAAAA+GGG | + | chr1_1:74333457-74333476 | Msa0043230:CDS | 30.0% | |
| AAGACAAATGCATACGAATT+TGG | + | chr1_1:74333568-74333587 | Msa0043230:CDS | 30.0% | |
| AGCTTATCATCCTATATAGA+AGG | + | chr1_1:74333651-74333670 | Msa0043230:CDS | 30.0% | |
| ! | TCCTTAGAATCTCTTTTGAT+TGG | + | chr1_1:74333711-74333730 | Msa0043230:CDS | 30.0% |
| TCCAATCAAAAGAGATTCTA+AGG | - | chr1_1:74333715-74333734 | None:intergenic | 30.0% | |
| GCTAAAATTGAATCTCCATT+TGG | - | chr1_1:74333954-74333973 | None:intergenic | 30.0% | |
| !! | TCAATTTTAGCACATGGATA+TGG | + | chr1_1:74333963-74333982 | Msa0043230:CDS | 30.0% |
| ! | TTCCATCTTTGGAAAAATGT+TGG | + | chr1_1:74333993-74334012 | Msa0043230:CDS | 30.0% |
| GATACAAAACTGAATCCAAT+TGG | + | chr1_1:74334304-74334323 | Msa0043230:intron | 30.0% | |
| TCTCGAGTATGTATCTATTT+CGG | + | chr1_1:74334333-74334352 | Msa0043230:intron | 30.0% | |
| GATACAAAACTGAATCCAAT+TGG | + | chr1_1:74334304-74334323 | Msa0043230:intron | 30.0% | |
| ! | TCTCGAGTATGTATCTATTT+TGG | + | chr1_1:74334333-74334352 | Msa0043230:intron | 30.0% |
| AGATTCATCATTATGAATCC+GGG | - | chr1_1:74334482-74334501 | None:intergenic | 30.0% | |
| GAGATTCATCATTATGAATC+CGG | - | chr1_1:74334483-74334502 | None:intergenic | 30.0% | |
| AGTGATTCATTAGAGTGAAT+CGG | - | chr1_1:74334522-74334541 | None:intergenic | 30.0% | |
| TACAGAGTTGACAAAAAAAG+TGG | - | chr1_1:74334567-74334586 | None:intergenic | 30.0% | |
| GCGTAGATAAACAAAAAAAG+GGG | - | chr1_1:74334597-74334616 | None:intergenic | 30.0% | |
| GACAAATTCAAGATAACAAG+TGG | - | chr1_1:74334861-74334880 | None:intergenic | 30.0% | |
| TATGACAGTTGTTCATAGTA+AGG | + | chr1_1:74335023-74335042 | Msa0043230:CDS | 30.0% | |
| ATGACAGTTGTTCATAGTAA+GGG | + | chr1_1:74335024-74335043 | Msa0043230:CDS | 30.0% | |
| ! | TTGACAAACATCCAGATTTT+GGG | + | chr1_1:74335168-74335187 | Msa0043230:CDS | 30.0% |
| GAGATCACATTGTTTAATGT+TGG | + | chr1_1:74335302-74335321 | Msa0043230:intron | 30.0% | |
| TAGTAGTTAAGGTTAGTAGT+TGG | + | chr1_1:74335516-74335535 | Msa0043230:intron | 30.0% | |
| CACACTGATATGTAAATACT+TGG | + | chr1_1:74335589-74335608 | Msa0043230:intron | 30.0% | |
| !! | CTCTTTATTTCTGCTATTGA+CGG | - | chr1_1:74335815-74335834 | None:intergenic | 30.0% |
| ! | ACATGATCTATTTTCACCAT+AGG | + | chr1_1:74335873-74335892 | Msa0043230:intron | 30.0% |
| ATTGGAAGCTTTACGTATTA+TGG | - | chr1_1:74335940-74335959 | None:intergenic | 30.0% | |
| !! | GAGCATCGGTAATAATATAT+TGG | - | chr1_1:74335958-74335977 | None:intergenic | 30.0% |
| GAAATAAGTCAAAAAGGGAA+TGG | - | chr1_1:74335986-74336005 | None:intergenic | 30.0% | |
| GGGTTGAAATAAGTCAAAAA+GGG | - | chr1_1:74335991-74336010 | None:intergenic | 30.0% | |
| AGGGTTGAAATAAGTCAAAA+AGG | - | chr1_1:74335992-74336011 | None:intergenic | 30.0% | |
| ATGTTATCAATAGCAGATTG+CGG | - | chr1_1:74336074-74336093 | None:intergenic | 30.0% | |
| AACAAAACCATAGTCATAGA+AGG | + | chr1_1:74336285-74336304 | Msa0043230:intron | 30.0% | |
| ACAAAACCATAGTCATAGAA+GGG | + | chr1_1:74336286-74336305 | Msa0043230:intron | 30.0% | |
| ATATATCTGTTCTGGTGTAT+TGG | + | chr1_1:74336369-74336388 | Msa0043230:intron | 30.0% | |
| CTCCAAAGTTTGTAAATTTG+AGG | + | chr1_1:74336395-74336414 | Msa0043230:intron | 30.0% | |
| AAGAAAATAGCTCATTTCCA+TGG | - | chr1_1:74336592-74336611 | None:intergenic | 30.0% | |
| TTCTTTATGCTGTGATCATA+AGG | + | chr1_1:74336607-74336626 | Msa0043230:CDS | 30.0% | |
| TCTTTATGCTGTGATCATAA+GGG | + | chr1_1:74336608-74336627 | Msa0043230:CDS | 30.0% | |
| TATGGAACTGAATTGAACAT+TGG | + | chr1_1:74337264-74337283 | Msa0043230:intron | 30.0% | |
| AATCATTTATACTCTCAGTC+AGG | - | chr1_1:74337315-74337334 | None:intergenic | 30.0% | |
| ! | ATCACTTAATTGTGGTTTGT+AGG | + | chr1_1:74337681-74337700 | Msa0043230:intron | 30.0% |
| TGATGAAGATTTCTTCTCTA+CGG | - | chr1_1:74337838-74337857 | None:intergenic | 30.0% | |
| ATTCCATCATTTCTTCGATT+GGG | - | chr1_1:74337927-74337946 | None:intergenic | 30.0% | |
| AATTCCATCATTTCTTCGAT+TGG | - | chr1_1:74337928-74337947 | None:intergenic | 30.0% | |
| !!! | TGGGAAATTTTAGGGCTTTT+TGG | + | chr1_1:74332075-74332094 | Msa0043230:five_prime_UTR | 35.0% |
| !!! | GGGAAATTTTAGGGCTTTTT+GGG | + | chr1_1:74332076-74332095 | Msa0043230:five_prime_UTR | 35.0% |
| AAGAAGGAGTTGAAGTGAAA+AGG | + | chr1_1:74332226-74332245 | Msa0043230:CDS | 35.0% | |
| AGAAGGAGTTGAAGTGAAAA+GGG | + | chr1_1:74332227-74332246 | Msa0043230:CDS | 35.0% | |
| !! | GAAGTGAAAAGGGTATTCAT+TGG | + | chr1_1:74332237-74332256 | Msa0043230:CDS | 35.0% |
| GAATAGTGAACAACGTTTCT+TGG | + | chr1_1:74332274-74332293 | Msa0043230:CDS | 35.0% | |
| ATAGTGAACAACGTTTCTTG+GGG | + | chr1_1:74332276-74332295 | Msa0043230:CDS | 35.0% | |
| !!! | GCTTCTGGTTTTGTTTCTTT+TGG | + | chr1_1:74332300-74332319 | Msa0043230:CDS | 35.0% |
| CTGTGTATACAAAGTAAGAG+AGG | - | chr1_1:74332725-74332744 | None:intergenic | 35.0% | |
| !! | GAACTGCATTATTTGCTATC+TGG | + | chr1_1:74332756-74332775 | Msa0043230:CDS | 35.0% |
| !! | CTGATGGTGCTATTATTCTA+TGG | + | chr1_1:74332784-74332803 | Msa0043230:CDS | 35.0% |
| AAAGGGGTTACATGTATTGA+TGG | + | chr1_1:74332964-74332983 | Msa0043230:CDS | 35.0% | |
| TTTGCATCTACTTCTTCAGA+TGG | + | chr1_1:74333015-74333034 | Msa0043230:CDS | 35.0% | |
| CAGATGGTACTGTTTGTATA+TGG | + | chr1_1:74333031-74333050 | Msa0043230:CDS | 35.0% | |
| TTTACAGTCACCTAGAATGA+TGG | - | chr1_1:74333168-74333187 | None:intergenic | 35.0% | |
| TGACTGTAAATTATCATGCC+TGG | + | chr1_1:74333178-74333197 | Msa0043230:CDS | 35.0% | |
| !! | TTCCGTTGGTTCTAAATCTA+TGG | + | chr1_1:74333208-74333227 | Msa0043230:CDS | 35.0% |
| AACAAGATTCACCTTTACTG+CGG | + | chr1_1:74333299-74333318 | Msa0043230:CDS | 35.0% | |
| AATGTACAAACTGGGTTCAT+AGG | - | chr1_1:74333443-74333462 | None:intergenic | 35.0% | |
| CTCACATGAATGTACAAACT+GGG | - | chr1_1:74333451-74333470 | None:intergenic | 35.0% | |
| GTACATTCATGTGAGCTAAA+AGG | + | chr1_1:74333456-74333475 | Msa0043230:CDS | 35.0% | |
| TCATTACCTGTAAGCATCAA+TGG | + | chr1_1:74333510-74333529 | Msa0043230:CDS | 35.0% | |
| ATGCATACGAATTTGGAAGA+TGG | + | chr1_1:74333575-74333594 | Msa0043230:CDS | 35.0% | |
| !! | ATCTCTTTTGATTGGACATG+AGG | + | chr1_1:74333719-74333738 | Msa0043230:CDS | 35.0% |
| !! | TTTTGATTGGACATGAGGAT+TGG | + | chr1_1:74333724-74333743 | Msa0043230:CDS | 35.0% |
| TTTGATTGGACATGAGGATT+GGG | + | chr1_1:74333725-74333744 | Msa0043230:CDS | 35.0% | |
| ACATGAGGATTGGGTATATT+CGG | + | chr1_1:74333734-74333753 | Msa0043230:CDS | 35.0% | |
| ATTGGGTATATTCGGTTGAA+TGG | + | chr1_1:74333742-74333761 | Msa0043230:CDS | 35.0% | |
| !! | AATGCTTTGTGGTTGATAAC+AGG | - | chr1_1:74333802-74333821 | None:intergenic | 35.0% |
| GATGCAGATAAAATGCTTTG+TGG | - | chr1_1:74333813-74333832 | None:intergenic | 35.0% | |
| ! | AAGCATTTTATCTGCATCCA+TGG | + | chr1_1:74333815-74333834 | Msa0043230:CDS | 35.0% |
| !! | GGAGATTCAATTTTAGCACA+TGG | + | chr1_1:74333957-74333976 | Msa0043230:CDS | 35.0% |
| !! | ATTTTAGCACATGGATATGG+TGG | + | chr1_1:74333966-74333985 | Msa0043230:CDS | 35.0% |
| ! | CACCAACATTTTTCCAAAGA+TGG | - | chr1_1:74333998-74334017 | None:intergenic | 35.0% |
| !! | AAAATGTTGGTGATGACAAC+TGG | + | chr1_1:74334006-74334025 | Msa0043230:CDS | 35.0% |
| CAGTGAGTTAGACAACATAT+AGG | - | chr1_1:74334244-74334263 | None:intergenic | 35.0% | |
| TACTCGAGATTTGTACCAAT+TGG | - | chr1_1:74334322-74334341 | None:intergenic | 35.0% | |
| AGATTCATCATGATGAATCC+GGG | - | chr1_1:74334380-74334399 | None:intergenic | 35.0% | |
| GAGATTCATCATGATGAATC+CGG | - | chr1_1:74334381-74334400 | None:intergenic | 35.0% | |
| TACTCGAGATTAGTACCAAT+TGG | - | chr1_1:74334424-74334443 | None:intergenic | 35.0% | |
| GATTCATCATTATGAATCCG+GGG | - | chr1_1:74334481-74334500 | None:intergenic | 35.0% | |
| TGATTCATTAGAGTGAATCG+GGG | - | chr1_1:74334520-74334539 | None:intergenic | 35.0% | |
| GTGATTCATTAGAGTGAATC+GGG | - | chr1_1:74334521-74334540 | None:intergenic | 35.0% | |
| AGATAAACAAAAAAAGGGGC+TGG | - | chr1_1:74334593-74334612 | None:intergenic | 35.0% | |
| GAATCTCGATTTAACAACCA+TGG | + | chr1_1:74334779-74334798 | Msa0043230:intron | 35.0% | |
| !! | AGTTGTCTGCAATTTTGACA+CGG | - | chr1_1:74334905-74334924 | None:intergenic | 35.0% |
| CAACTAGAATTTATGCTCCA+TGG | + | chr1_1:74334920-74334939 | Msa0043230:CDS | 35.0% | |
| TGACAGTTGTTCATAGTAAG+GGG | + | chr1_1:74335025-74335044 | Msa0043230:CDS | 35.0% | |
| ATAACAAGACTTCTGCAAAG+TGG | - | chr1_1:74335136-74335155 | None:intergenic | 35.0% | |
| ! | CTTGACAAACATCCAGATTT+TGG | + | chr1_1:74335167-74335186 | Msa0043230:CDS | 35.0% |
| ACATATTTGCACCCAAAATC+TGG | - | chr1_1:74335182-74335201 | None:intergenic | 35.0% | |
| CAAAAACCTATTTATGCCCA+AGG | + | chr1_1:74335219-74335238 | Msa0043230:CDS | 35.0% | |
| AACTAACCTTGGGCATAAAT+AGG | - | chr1_1:74335228-74335247 | None:intergenic | 35.0% | |
| TCTTTCTCATTGTTATCTGC+TGG | + | chr1_1:74335328-74335347 | Msa0043230:intron | 35.0% | |
| AACTTTGACTGCAAAGGATT+TGG | + | chr1_1:74335355-74335374 | Msa0043230:intron | 35.0% | |
| CATGTTGCTATGCAGAATAA+AGG | + | chr1_1:74335488-74335507 | Msa0043230:intron | 35.0% | |
| AGTTAAGGTTAGTAGTTGGT+TGG | + | chr1_1:74335520-74335539 | Msa0043230:intron | 35.0% | |
| ! | GTTAGTAGTTGGTTGGTTAT+AGG | + | chr1_1:74335527-74335546 | Msa0043230:intron | 35.0% |
| ! | ATACTTGGTGAATAGACCAT+TGG | + | chr1_1:74335604-74335623 | Msa0043230:intron | 35.0% |
| TTGTCAATTAGTGGCAATAG+TGG | + | chr1_1:74335659-74335678 | Msa0043230:intron | 35.0% | |
| ! | CTCTTCACTTTAGTTTCCTA+TGG | - | chr1_1:74335892-74335911 | None:intergenic | 35.0% |
| AGGAAACTAAAGTGAAGAGT+TGG | + | chr1_1:74335893-74335912 | Msa0043230:intron | 35.0% | |
| ! | CTATTGATAACATTGCTCGT+AGG | + | chr1_1:74336081-74336100 | Msa0043230:intron | 35.0% |
| TGCATCTCATATTGAGGATA+TGG | + | chr1_1:74336227-74336246 | Msa0043230:intron | 35.0% | |
| GCATCTCATATTGAGGATAT+GGG | + | chr1_1:74336228-74336247 | Msa0043230:intron | 35.0% | |
| ATGAGACCTCTGATACAAAT+GGG | + | chr1_1:74336444-74336463 | Msa0043230:CDS | 35.0% | |
| CCATAGAGTTTATGTGATTC+AGG | - | chr1_1:74336569-74336588 | None:intergenic | 35.0% | |
| CCTGAATCACATAAACTCTA+TGG | + | chr1_1:74336566-74336585 | Msa0043230:CDS | 35.0% | |
| TAGAGCAGTAAAGTGTACAA+CGG | - | chr1_1:74336876-74336895 | None:intergenic | 35.0% | |
| TGATTGTAAACACAGAGAAC+TGG | - | chr1_1:74337102-74337121 | None:intergenic | 35.0% | |
| GTGTTTACAATCACAACAAC+AGG | + | chr1_1:74337109-74337128 | Msa0043230:CDS | 35.0% | |
| ! | TGGTTGACATTTGTTGAGTT+TGG | + | chr1_1:74337228-74337247 | Msa0043230:intron | 35.0% |
| ! | TAAGCGCTTGTGATTTTGTT+CGG | + | chr1_1:74337370-74337389 | Msa0043230:intron | 35.0% |
| ACTTATGACATGTCCATAAG+CGG | + | chr1_1:74337410-74337429 | Msa0043230:intron | 35.0% | |
| AATAACCTGAAAACCGCTTA+TGG | - | chr1_1:74337426-74337445 | None:intergenic | 35.0% | |
| AACGCGTAAAATAAATGCCT+GGG | - | chr1_1:74337603-74337622 | None:intergenic | 35.0% | |
| AAACGCGTAAAATAAATGCC+TGG | - | chr1_1:74337604-74337623 | None:intergenic | 35.0% | |
| TTAGTTATAGTCTTCTTGCG+AGG | + | chr1_1:74337715-74337734 | Msa0043230:CDS | 35.0% | |
| TTCCATCATTTCTTCGATTG+GGG | - | chr1_1:74337926-74337945 | None:intergenic | 35.0% | |
| ! | AATGATGGAATTCTAGCTGT+TGG | + | chr1_1:74337936-74337955 | Msa0043230:CDS | 35.0% |
| ! | GTAGAGGCATGACATATAAA+AGG | - | chr1_1:74338068-74338087 | None:intergenic | 35.0% |
| GTTAGCATACCTATACCTAT+AGG | - | chr1_1:74338261-74338280 | None:intergenic | 35.0% | |
| TTTCAAGAGGAACAGAAACA+GGG | - | chr1_1:74338292-74338311 | None:intergenic | 35.0% | |
| !! | TTTTCAAGAGGAACAGAAAC+AGG | - | chr1_1:74338293-74338312 | None:intergenic | 35.0% |
| CCTAAAATTTCCCACAGTAC+CGG | - | chr1_1:74332069-74332088 | None:intergenic | 40.0% | |
| ! | CGGTACTGTGGGAAATTTTA+GGG | + | chr1_1:74332067-74332086 | Msa0043230:five_prime_UTR | 40.0% |
| !! | AAAAGGGTATTCATTGGAGC+AGG | + | chr1_1:74332243-74332262 | Msa0043230:CDS | 40.0% |
| AGTAACCTTGGGGTTGAAAA+TGG | - | chr1_1:74332343-74332362 | None:intergenic | 40.0% | |
| AGTGAAAAGGAGTAACCTTG+GGG | - | chr1_1:74332353-74332372 | None:intergenic | 40.0% | |
| GAGTGAAAAGGAGTAACCTT+GGG | - | chr1_1:74332354-74332373 | None:intergenic | 40.0% | |
| TGAGTGAAAAGGAGTAACCT+TGG | - | chr1_1:74332355-74332374 | None:intergenic | 40.0% | |
| TCAAAATTTGAGCACTCTGC+AGG | - | chr1_1:74332426-74332445 | None:intergenic | 40.0% | |
| !! | CAAATTTTGACCACTCTTCC+TGG | + | chr1_1:74332436-74332455 | Msa0043230:CDS | 40.0% |
| ATGTACCTTCCCATCAACAA+GGG | - | chr1_1:74332817-74332836 | None:intergenic | 40.0% | |
| TACCACAATCCCACAAGAAA+GGG | + | chr1_1:74332947-74332966 | Msa0043230:CDS | 40.0% | |
| ACATGTAACCCCTTTCTTGT+GGG | - | chr1_1:74332959-74332978 | None:intergenic | 40.0% | |
| TACATGTAACCCCTTTCTTG+TGG | - | chr1_1:74332960-74332979 | None:intergenic | 40.0% | |
| !! | ATCTATGGTAGCCTTATCGA+TGG | + | chr1_1:74333223-74333242 | Msa0043230:CDS | 40.0% |
| ACAAGATTCACCTTTACTGC+GGG | + | chr1_1:74333300-74333319 | Msa0043230:CDS | 40.0% | |
| GCTCACATGAATGTACAAAC+TGG | - | chr1_1:74333452-74333471 | None:intergenic | 40.0% | |
| ! | AGCTAAAAGGGCATACAGAT+TGG | + | chr1_1:74333469-74333488 | Msa0043230:CDS | 40.0% |
| GTAATGAGAAGTCCAAACTC+CGG | - | chr1_1:74333497-74333516 | None:intergenic | 40.0% | |
| AAACGGGAATGGCATATACA+GGG | + | chr1_1:74333617-74333636 | Msa0043230:CDS | 40.0% | |
| AAGGACAGGACCTTCTATAT+AGG | - | chr1_1:74333664-74333683 | None:intergenic | 40.0% | |
| !! | GATCATCATAGTCTTGTCCA+TGG | - | chr1_1:74333835-74333854 | None:intergenic | 40.0% |
| TGGACAAGACTATGATGATC+TGG | + | chr1_1:74333835-74333854 | Msa0043230:CDS | 40.0% | |
| TGGATGAATGTGGTTACTGT+TGG | + | chr1_1:74333882-74333901 | Msa0043230:CDS | 40.0% | |
| ! | TGACAACTGGCTTACACAAA+AGG | + | chr1_1:74334019-74334038 | Msa0043230:CDS | 40.0% |
| ATCGGTGACTGATATAGCAT+GGG | + | chr1_1:74334061-74334080 | Msa0043230:CDS | 40.0% | |
| TGAATCTCATCTTGAATCCC+CGG | + | chr1_1:74334359-74334378 | Msa0043230:intron | 40.0% | |
| GATTCATCATGATGAATCCG+GGG | - | chr1_1:74334379-74334398 | None:intergenic | 40.0% | |
| TGAATCTCATCTTGAATCCC+CGG | + | chr1_1:74334359-74334378 | Msa0043230:intron | 40.0% | |
| GGTGTTAACTTTGACTGCAA+AGG | + | chr1_1:74335349-74335368 | Msa0043230:intron | 40.0% | |
| TCGTAGGTAGTTGACTGATA+GGG | + | chr1_1:74335386-74335405 | Msa0043230:intron | 40.0% | |
| TACAGCTTATGGTAAGCTGT+TGG | + | chr1_1:74335465-74335484 | Msa0043230:intron | 40.0% | |
| !! | ACCATTGGCTCTTTGTAGAA+GGG | + | chr1_1:74335619-74335638 | Msa0043230:intron | 40.0% |
| TAGAAGGGAAACCTTAGAGA+CGG | + | chr1_1:74335634-74335653 | Msa0043230:intron | 40.0% | |
| AATTGACAACTCCGTCTCTA+AGG | - | chr1_1:74335648-74335667 | None:intergenic | 40.0% | |
| TTATCCTAGCTTCGCCATTA+TGG | + | chr1_1:74335744-74335763 | Msa0043230:intron | 40.0% | |
| TAGTGCACACATGGATTCTT+TGG | - | chr1_1:74335852-74335871 | None:intergenic | 40.0% | |
| GATCATGTTTAGTGCACACA+TGG | - | chr1_1:74335861-74335880 | None:intergenic | 40.0% | |
| GAAATAGCAGCTAGAGTTGT+GGG | - | chr1_1:74336020-74336039 | None:intergenic | 40.0% | |
| TGAAATAGCAGCTAGAGTTG+TGG | - | chr1_1:74336021-74336040 | None:intergenic | 40.0% | |
| GGACATATTGTCTACGTACT+TGG | + | chr1_1:74336199-74336218 | Msa0043230:intron | 40.0% | |
| GATGTCTGCATCTCATATTG+AGG | + | chr1_1:74336221-74336240 | Msa0043230:intron | 40.0% | |
| ATATGGGTCCATCCAAATGA+TGG | + | chr1_1:74336244-74336263 | Msa0043230:intron | 40.0% | |
| TATCACTACCAGCCATCATT+TGG | - | chr1_1:74336259-74336278 | None:intergenic | 40.0% | |
| CATGAGACCTCTGATACAAA+TGG | + | chr1_1:74336443-74336462 | Msa0043230:CDS | 40.0% | |
| TGAGACCTCTGATACAAATG+GGG | + | chr1_1:74336445-74336464 | Msa0043230:CDS | 40.0% | |
| ATCAACCCCATTTGTATCAG+AGG | - | chr1_1:74336453-74336472 | None:intergenic | 40.0% | |
| TCTGATACAAATGGGGTTGA+TGG | + | chr1_1:74336452-74336471 | Msa0043230:CDS | 40.0% | |
| ACCTCCAATTGAAGATCAAC+TGG | + | chr1_1:74336526-74336545 | Msa0043230:CDS | 40.0% | |
| CATGCCAGTTGATCTTCAAT+TGG | - | chr1_1:74336533-74336552 | None:intergenic | 40.0% | |
| CAATTGAAGATCAACTGGCA+TGG | + | chr1_1:74336531-74336550 | Msa0043230:CDS | 40.0% | |
| TCACATAAACTCTATGGCCA+TGG | + | chr1_1:74336572-74336591 | Msa0043230:CDS | 40.0% | |
| ! | GCTTGTTGCTTCTTCATGTA+AGG | + | chr1_1:74336634-74336653 | Msa0043230:CDS | 40.0% |
| TCATGTAAGGTATGCACTGT+TGG | + | chr1_1:74336647-74336666 | Msa0043230:intron | 40.0% | |
| ! | ATGCACTGTTGGTCTAACTA+TGG | + | chr1_1:74336658-74336677 | Msa0043230:intron | 40.0% |
| CAAAACGATCTAAGCCAAGT+TGG | - | chr1_1:74336840-74336859 | None:intergenic | 40.0% | |
| ! | CAACTTGGCTTAGATCGTTT+TGG | + | chr1_1:74336838-74336857 | Msa0043230:intron | 40.0% |
| TAAAGTGTACAACGGTGAGA+CGG | - | chr1_1:74336868-74336887 | None:intergenic | 40.0% | |
| TTAAGCTATGGGATTGCAAG+CGG | - | chr1_1:74337018-74337037 | None:intergenic | 40.0% | |
| ! | CTGTGTCACTGTTAAGCTAT+GGG | - | chr1_1:74337029-74337048 | None:intergenic | 40.0% |
| ! | TCTGTGTCACTGTTAAGCTA+TGG | - | chr1_1:74337030-74337049 | None:intergenic | 40.0% |
| TAGCTTAACAGTGACACAGA+TGG | + | chr1_1:74337030-74337049 | Msa0043230:CDS | 40.0% | |
| ACAGATATGCTTGCATTCTG+AGG | - | chr1_1:74337153-74337172 | None:intergenic | 40.0% | |
| ! | TTTGGAGCACATCGATGTTA+TGG | + | chr1_1:74337246-74337265 | Msa0043230:intron | 40.0% |
| ! | AAGCGCTTGTGATTTTGTTC+GGG | + | chr1_1:74337371-74337390 | Msa0043230:intron | 40.0% |
| ! | ATTTTGTTCGGGAGAGCTTA+TGG | + | chr1_1:74337382-74337401 | Msa0043230:intron | 40.0% |
| ACGCGTAAAATAAATGCCTG+GGG | - | chr1_1:74337602-74337621 | None:intergenic | 40.0% | |
| GGATTATCTGGTCATGTTCT+TGG | + | chr1_1:74337754-74337773 | Msa0043230:CDS | 40.0% | |
| GTGAACCTGTTGCAAATTCA+TGG | - | chr1_1:74337791-74337810 | None:intergenic | 40.0% | |
| CGACAAGACAGTGAAAATCT+GGG | + | chr1_1:74337812-74337831 | Msa0043230:CDS | 40.0% | |
| TAGTGTGACAGCATTGTCTT+GGG | + | chr1_1:74337893-74337912 | Msa0043230:CDS | 40.0% | |
| ! | TGGAATTCTAGCTGTTGGAA+TGG | + | chr1_1:74337941-74337960 | Msa0043230:CDS | 40.0% |
| CTAGCTGTTGGAATGGAAAA+CGG | + | chr1_1:74337948-74337967 | Msa0043230:CDS | 40.0% | |
| AAAACGGCCAAATAGAGTTG+TGG | + | chr1_1:74337964-74337983 | Msa0043230:CDS | 40.0% | |
| ACAGACTCCACAACTCTATT+TGG | - | chr1_1:74337974-74337993 | None:intergenic | 40.0% | |
| TCTGTCCTATAACAGACAAG+AGG | + | chr1_1:74337989-74338008 | Msa0043230:CDS | 40.0% | |
| TCCTATAACAGACAAGAGGA+TGG | + | chr1_1:74337993-74338012 | Msa0043230:CDS | 40.0% | |
| TCCATCCTCTTGTCTGTTAT+AGG | - | chr1_1:74337997-74338016 | None:intergenic | 40.0% | |
| ! | AGTCTACAACTTGCTTCTTG+TGG | + | chr1_1:74338131-74338150 | Msa0043230:CDS | 40.0% |
| ! | CCGGTACTGTGGGAAATTTT+AGG | + | chr1_1:74332066-74332085 | Msa0043230:five_prime_UTR | 45.0% |
| TTGGGTCAGTCAGTGTTAGT+GGG | - | chr1_1:74332110-74332129 | None:intergenic | 45.0% | |
| ATTGGGTCAGTCAGTGTTAG+TGG | - | chr1_1:74332111-74332130 | None:intergenic | 45.0% | |
| ATTATCACAGCTCCGACAGA+GGG | - | chr1_1:74332195-74332214 | None:intergenic | 45.0% | |
| TATTATCACAGCTCCGACAG+AGG | - | chr1_1:74332196-74332215 | None:intergenic | 45.0% | |
| ! | TTGACAACAGCTTTGTGACC+AGG | - | chr1_1:74332457-74332476 | None:intergenic | 45.0% |
| CTGTTGTCAATTGCACTCAC+TGG | + | chr1_1:74332467-74332486 | Msa0043230:intron | 45.0% | |
| TTGCTATCTGGAGATGCTGA+TGG | + | chr1_1:74332768-74332787 | Msa0043230:CDS | 45.0% | |
| GATGTACCTTCCCATCAACA+AGG | - | chr1_1:74332818-74332837 | None:intergenic | 45.0% | |
| GTACCACAATCCCACAAGAA+AGG | + | chr1_1:74332946-74332965 | Msa0043230:CDS | 45.0% | |
| ACCACAATCCCACAAGAAAG+GGG | + | chr1_1:74332948-74332967 | Msa0043230:CDS | 45.0% | |
| AACCAACGGAAAAAGAGTCC+AGG | - | chr1_1:74333199-74333218 | None:intergenic | 45.0% | |
| !! | TATGGTAGCCTTATCGATGG+CGG | + | chr1_1:74333226-74333245 | Msa0043230:CDS | 45.0% |
| ACGATTTGACCACTACATCC+AGG | - | chr1_1:74333257-74333276 | None:intergenic | 45.0% | |
| TGGTCAAATCGTCCTTGCAA+TGG | + | chr1_1:74333265-74333284 | Msa0043230:CDS | 45.0% | |
| GGTCAAATCGTCCTTGCAAT+GGG | + | chr1_1:74333266-74333285 | Msa0043230:CDS | 45.0% | |
| TATCCAATCCTCCCATTGCA+AGG | - | chr1_1:74333280-74333299 | None:intergenic | 45.0% | |
| CAAGATTCACCTTTACTGCG+GGG | + | chr1_1:74333301-74333320 | Msa0043230:CDS | 45.0% | |
| AAGATTCACCTTTACTGCGG+GGG | + | chr1_1:74333302-74333321 | Msa0043230:CDS | 45.0% | |
| TGGCGACAAAGATACCTTTC+CGG | - | chr1_1:74333333-74333352 | None:intergenic | 45.0% | |
| ! | AAGGGCATACAGATTGGATC+CGG | + | chr1_1:74333475-74333494 | Msa0043230:CDS | 45.0% |
| TACAGATTGGATCCGGAGTT+TGG | + | chr1_1:74333482-74333501 | Msa0043230:CDS | 45.0% | |
| ACCTGTAAGCATCAATGGAG+AGG | + | chr1_1:74333515-74333534 | Msa0043230:CDS | 45.0% | |
| ACCTCTCCATTGATGCTTAC+AGG | - | chr1_1:74333519-74333538 | None:intergenic | 45.0% | |
| CTGTATATGCCATTCCCGTT+TGG | - | chr1_1:74333618-74333637 | None:intergenic | 45.0% | |
| CAAACGGGAATGGCATATAC+AGG | + | chr1_1:74333616-74333635 | Msa0043230:CDS | 45.0% | |
| TATAGAAGGTCCTGTCCTTG+TGG | + | chr1_1:74333665-74333684 | Msa0043230:CDS | 45.0% | |
| ! | CACACACCAGAAGTCTTTTC+AGG | - | chr1_1:74333864-74333883 | None:intergenic | 45.0% |
| CTGAAAAGACTTCTGGTGTG+TGG | + | chr1_1:74333862-74333881 | Msa0043230:CDS | 45.0% | |
| TTCTGGTGTGTGGATGAATG+TGG | + | chr1_1:74333872-74333891 | Msa0043230:CDS | 45.0% | |
| TGGGATTCTATGGTGGTCAT+TGG | + | chr1_1:74333925-74333944 | Msa0043230:CDS | 45.0% | |
| !! | ATGGTGGATCGTTCCATCTT+TGG | + | chr1_1:74333982-74334001 | Msa0043230:CDS | 45.0% |
| CTTACACAAAAGGTTCCCTC+TGG | + | chr1_1:74334029-74334048 | Msa0043230:CDS | 45.0% | |
| !! | TCCCTCTGGTCATTTTGCAT+CGG | + | chr1_1:74334043-74334062 | Msa0043230:CDS | 45.0% |
| ACCGATGCAAAATGACCAGA+GGG | - | chr1_1:74334047-74334066 | None:intergenic | 45.0% | |
| CATCGGTGACTGATATAGCA+TGG | + | chr1_1:74334060-74334079 | Msa0043230:CDS | 45.0% | |
| !! | GATATAGCATGGGCTAGATC+TGG | + | chr1_1:74334071-74334090 | Msa0043230:CDS | 45.0% |
| TATATCAGCTAGCCATGACC+AGG | + | chr1_1:74334103-74334122 | Msa0043230:CDS | 45.0% | |
| TTATGCTCCATGGAAAGTCG+AGG | + | chr1_1:74334930-74334949 | Msa0043230:CDS | 45.0% | |
| AGAGAAACCTCGACTTTCCA+TGG | - | chr1_1:74334940-74334959 | None:intergenic | 45.0% | |
| GTCGAGGTTTCTCTTCAAGA+TGG | + | chr1_1:74334946-74334965 | Msa0043230:CDS | 45.0% | |
| CTCTTCAAGATGGAGAGTCT+TGG | + | chr1_1:74334956-74334975 | Msa0043230:CDS | 45.0% | |
| AGTCTTGGTATGAGATTGCG+CGG | + | chr1_1:74334971-74334990 | Msa0043230:CDS | 45.0% | |
| ATATCATGGCCATGAACCTG+AGG | - | chr1_1:74334997-74335016 | None:intergenic | 45.0% | |
| ! | AAGGGGAATCACCGTTTTGT+TGG | + | chr1_1:74335042-74335061 | Msa0043230:CDS | 45.0% |
| GGTGCAAATATGTCAGCTCT+TGG | + | chr1_1:74335189-74335208 | Msa0043230:CDS | 45.0% | |
| GGATTTGGCTGTATACTCGT+AGG | + | chr1_1:74335370-74335389 | Msa0043230:intron | 45.0% | |
| CTCGTAGGTAGTTGACTGAT+AGG | + | chr1_1:74335385-74335404 | Msa0043230:intron | 45.0% | |
| !! | GACCATTGGCTCTTTGTAGA+AGG | + | chr1_1:74335618-74335637 | Msa0043230:intron | 45.0% |
| TCCCTTCTACAAAGAGCCAA+TGG | - | chr1_1:74335623-74335642 | None:intergenic | 45.0% | |
| GAGACGGAGTTGTCAATTAG+TGG | + | chr1_1:74335650-74335669 | Msa0043230:intron | 45.0% | |
| CAGTTTCTGAGCTGATGTAG+CGG | + | chr1_1:74335785-74335804 | Msa0043230:intron | 45.0% | |
| GCTAGAGTTGTGGGCAAATA+GGG | - | chr1_1:74336011-74336030 | None:intergenic | 45.0% | |
| AGCTAGAGTTGTGGGCAAAT+AGG | - | chr1_1:74336012-74336031 | None:intergenic | 45.0% | |
| CAATAGCAGATTGCGGAAAC+TGG | - | chr1_1:74336067-74336086 | None:intergenic | 45.0% | |
| ACTACCAGCCATCATTTGGA+TGG | - | chr1_1:74336255-74336274 | None:intergenic | 45.0% | |
| AACCATAGTCATAGAAGGGC+TGG | + | chr1_1:74336290-74336309 | Msa0043230:intron | 45.0% | |
| TACCAGCCCTTCTATGACTA+TGG | - | chr1_1:74336295-74336314 | None:intergenic | 45.0% | |
| !! | TACAAATGGGGTTGATGGTC+TGG | + | chr1_1:74336457-74336476 | Msa0043230:CDS | 45.0% |
| AAACACAGTTGGAACTGCGT+CGG | - | chr1_1:74336501-74336520 | None:intergenic | 45.0% | |
| GGAGGTTCAGTAAACACAGT+TGG | - | chr1_1:74336512-74336531 | None:intergenic | 45.0% | |
| GCCAGTTGATCTTCAATTGG+AGG | - | chr1_1:74336530-74336549 | None:intergenic | 45.0% | |
| AAAGTGTACAACGGTGAGAC+GGG | - | chr1_1:74336867-74336886 | None:intergenic | 45.0% | |
| TTCTGCCACAGCAGTAGATT+GGG | - | chr1_1:74336957-74336976 | None:intergenic | 45.0% | |
| ! | GTTGGTTCATGGAAAGCAGT+TGG | + | chr1_1:74336992-74337011 | Msa0043230:CDS | 45.0% |
| ! | CATGTCCATAAGCGGTTTTC+AGG | + | chr1_1:74337418-74337437 | Msa0043230:intron | 45.0% |
| TTATAGTCTTCTTGCGAGGC+AGG | + | chr1_1:74337719-74337738 | Msa0043230:CDS | 45.0% | |
| TCATGTTCTTGGAACCCACA+CGG | + | chr1_1:74337765-74337784 | Msa0043230:CDS | 45.0% | |
| TTGCAAATTCATGGCCGTGT+GGG | - | chr1_1:74337782-74337801 | None:intergenic | 45.0% | |
| GCGACAAGACAGTGAAAATC+TGG | + | chr1_1:74337811-74337830 | Msa0043230:CDS | 45.0% | |
| GTCACACTACTCGTAAATGG+AGG | - | chr1_1:74337882-74337901 | None:intergenic | 45.0% | |
| GCTGTCACACTACTCGTAAA+TGG | - | chr1_1:74337885-74337904 | None:intergenic | 45.0% | |
| GTAGTGTGACAGCATTGTCT+TGG | + | chr1_1:74337892-74337911 | Msa0043230:CDS | 45.0% | |
| CTCCCCAATCGAAGAAATGA+TGG | + | chr1_1:74337921-74337940 | Msa0043230:CDS | 45.0% | |
| !! | GGATGGAAGCATTGTAGTAC+CGG | + | chr1_1:74338010-74338029 | Msa0043230:CDS | 45.0% |
| !! | GATGGAAGCATTGTAGTACC+GGG | + | chr1_1:74338011-74338030 | Msa0043230:CDS | 45.0% |
| ! | CAATTTTCCTCCATGCCAGA+CGG | - | chr1_1:74338097-74338116 | None:intergenic | 45.0% |
| TCTGGCATGGAGGAAAATTG+AGG | + | chr1_1:74338097-74338116 | Msa0043230:CDS | 45.0% | |
| ACAGAGGGCAGCGAGATTAT+CGG | - | chr1_1:74332180-74332199 | None:intergenic | 50.0% | |
| ATAATCTCGCTGCCCTCTGT+CGG | + | chr1_1:74332180-74332199 | Msa0043230:five_prime_UTR | 50.0% | |
| ! | AACGTTTCTTGGGGTGCTTC+TGG | + | chr1_1:74332285-74332304 | Msa0043230:CDS | 50.0% |
| CTTGGGGTTGAAAATGGCGA+CGG | - | chr1_1:74332337-74332356 | None:intergenic | 50.0% | |
| ! | AGCTTTGTGACCAGGAAGAG+TGG | - | chr1_1:74332449-74332468 | None:intergenic | 50.0% |
| TGGGAACTGTCCCTTGTTGA+TGG | + | chr1_1:74332804-74332823 | Msa0043230:CDS | 50.0% | |
| GGGAACTGTCCCTTGTTGAT+GGG | + | chr1_1:74332805-74332824 | Msa0043230:CDS | 50.0% | |
| ! | ACTGTCCCTTGTTGATGGGA+AGG | + | chr1_1:74332809-74332828 | Msa0043230:CDS | 50.0% |
| ACCCCTTTCTTGTGGGATTG+TGG | - | chr1_1:74332952-74332971 | None:intergenic | 50.0% | |
| GTACTTCCACTGACGAGTAG+TGG | + | chr1_1:74333060-74333079 | Msa0043230:CDS | 50.0% | |
| ! | TGCCTGGACTCTTTTTCCGT+TGG | + | chr1_1:74333194-74333213 | Msa0043230:CDS | 50.0% |
| AGGCAATTCCGCCATCGATA+AGG | - | chr1_1:74333237-74333256 | None:intergenic | 50.0% | |
| !! | TTATCGATGGCGGAATTGCC+TGG | + | chr1_1:74333236-74333255 | Msa0043230:CDS | 50.0% |
| CAAATCGTCCTTGCAATGGG+AGG | + | chr1_1:74333269-74333288 | Msa0043230:CDS | 50.0% | |
| TTACGTAGCTCCGTGCCAAA+CGG | + | chr1_1:74333600-74333619 | Msa0043230:CDS | 50.0% | |
| TATGCCATTCCCGTTTGGCA+CGG | - | chr1_1:74333613-74333632 | None:intergenic | 50.0% | |
| AAGAAGAAGAGCCAGCCACA+AGG | - | chr1_1:74333683-74333702 | None:intergenic | 50.0% | |
| TTCCGTGGATGCAACCAAAG+GGG | - | chr1_1:74333772-74333791 | None:intergenic | 50.0% | |
| CTTCCGTGGATGCAACCAAA+GGG | - | chr1_1:74333773-74333792 | None:intergenic | 50.0% | |
| CTTTGGTTGCATCCACGGAA+GGG | + | chr1_1:74333772-74333791 | Msa0043230:CDS | 50.0% | |
| TTTGGTTGCATCCACGGAAG+GGG | + | chr1_1:74333773-74333792 | Msa0043230:CDS | 50.0% | |
| TGGCAGCCTGAAAAGACTTC+TGG | + | chr1_1:74333855-74333874 | Msa0043230:CDS | 50.0% | |
| GAACTAAGCCACTGTGCTCT+GGG | + | chr1_1:74333906-74333925 | Msa0043230:CDS | 50.0% | |
| CATAGAATCCCAGAGCACAG+TGG | - | chr1_1:74333917-74333936 | None:intergenic | 50.0% | |
| !! | CACTGTGCTCTGGGATTCTA+TGG | + | chr1_1:74333915-74333934 | Msa0043230:CDS | 50.0% |
| !! | TGTGCTCTGGGATTCTATGG+TGG | + | chr1_1:74333918-74333937 | Msa0043230:CDS | 50.0% |
| CACCGATGCAAAATGACCAG+AGG | - | chr1_1:74334048-74334067 | None:intergenic | 50.0% | |
| GAGTGAATCGGGGTTCATTG+CGG | - | chr1_1:74334510-74334529 | None:intergenic | 50.0% | |
| !! | GGGAATCACCGTTTTGTTGG+CGG | + | chr1_1:74335045-74335064 | Msa0043230:CDS | 50.0% |
| CATCAGCTCCGCCAACAAAA+CGG | - | chr1_1:74335056-74335075 | None:intergenic | 50.0% | |
| ATCGCCATAATGGCGAAGCT+AGG | - | chr1_1:74335751-74335770 | None:intergenic | 50.0% | |
| TAGCTTCGCCATTATGGCGA+TGG | + | chr1_1:74335750-74335769 | Msa0043230:intron | 50.0% | |
| CGCTACATCAGCTCAGAAAC+TGG | - | chr1_1:74335787-74335806 | None:intergenic | 50.0% | |
| AGGGAATGGATGCAGAGCAT+CGG | - | chr1_1:74335972-74335991 | None:intergenic | 50.0% | |
| TGCGTCGGGAACAGTTTCAA+AGG | - | chr1_1:74336486-74336505 | None:intergenic | 50.0% | |
| AACACAGTTGGAACTGCGTC+GGG | - | chr1_1:74336500-74336519 | None:intergenic | 50.0% | |
| AACTGGCATGGCACACACTT+TGG | + | chr1_1:74336543-74336562 | Msa0043230:CDS | 50.0% | |
| CTTCTGCCACAGCAGTAGAT+TGG | - | chr1_1:74336958-74336977 | None:intergenic | 50.0% | |
| CTACTGCTGTGGCAGAAGTA+TGG | + | chr1_1:74336960-74336979 | Msa0043230:CDS | 50.0% | |
| ! | CTGTGGCAGAAGTATGGCTT+TGG | + | chr1_1:74336966-74336985 | Msa0043230:CDS | 50.0% |
| !! | GAAGTATGGCTTTGGCAGGT+TGG | + | chr1_1:74336974-74336993 | Msa0043230:CDS | 50.0% |
| !! | AGGGACACAAGCGGATTATC+TGG | + | chr1_1:74337742-74337761 | Msa0043230:CDS | 50.0% |
| GTTGCAAATTCATGGCCGTG+TGG | - | chr1_1:74337783-74337802 | None:intergenic | 50.0% | |
| CACGGCCATGAATTTGCAAC+AGG | + | chr1_1:74337783-74337802 | Msa0043230:CDS | 50.0% | |
| GTGACAGCATTGTCTTGGGT+TGG | + | chr1_1:74337897-74337916 | Msa0043230:CDS | 50.0% | |
| TACGCGAACAAGAAGAGCAG+CGG | - | chr1_1:74338042-74338061 | None:intergenic | 50.0% | |
| TGCCTCTACAGTAAACCGTC+TGG | + | chr1_1:74338079-74338098 | Msa0043230:CDS | 50.0% | |
| TGCCAGACGGTTTACTGTAG+AGG | - | chr1_1:74338084-74338103 | None:intergenic | 50.0% | |
| CTACAGTAAACCGTCTGGCA+TGG | + | chr1_1:74338084-74338103 | Msa0043230:CDS | 50.0% | |
| CAGAGGGCAGCGAGATTATC+GGG | - | chr1_1:74332179-74332198 | None:intergenic | 55.0% | |
| !! | CGTCGCCATTTTCAACCCCA+AGG | + | chr1_1:74332335-74332354 | Msa0043230:CDS | 55.0% |
| GGCTTACCACTACTCGTCAG+TGG | - | chr1_1:74333069-74333088 | None:intergenic | 55.0% | |
| GCGGAATTGCCTGGATGTAG+TGG | + | chr1_1:74333245-74333264 | Msa0043230:CDS | 55.0% | |
| CGTCCTTGCAATGGGAGGAT+TGG | + | chr1_1:74333274-74333293 | Msa0043230:CDS | 55.0% | |
| TTCACCTTTACTGCGGGGGA+AGG | + | chr1_1:74333306-74333325 | Msa0043230:CDS | 55.0% | |
| TACGTAGCTCCGTGCCAAAC+GGG | + | chr1_1:74333601-74333620 | Msa0043230:CDS | 55.0% | |
| CGGGAATGGCATATACAGGG+AGG | + | chr1_1:74333620-74333639 | Msa0043230:CDS | 55.0% | |
| GGTTGAATGGCAACCCCCTT+TGG | + | chr1_1:74333755-74333774 | Msa0043230:CDS | 55.0% | |
| ACCCCCTTTGGTTGCATCCA+CGG | + | chr1_1:74333767-74333786 | Msa0043230:CDS | 55.0% | |
| TCCGTGGATGCAACCAAAGG+GGG | - | chr1_1:74333771-74333790 | None:intergenic | 55.0% | |
| CCTTCCGTGGATGCAACCAA+AGG | - | chr1_1:74333774-74333793 | None:intergenic | 55.0% | |
| CCTTTGGTTGCATCCACGGA+AGG | + | chr1_1:74333771-74333790 | Msa0043230:CDS | 55.0% | |
| ATAACAGGCTTCCCCTTCCG+TGG | - | chr1_1:74333787-74333806 | None:intergenic | 55.0% | |
| CGAACTAAGCCACTGTGCTC+TGG | + | chr1_1:74333905-74333924 | Msa0043230:CDS | 55.0% | |
| GGTGGTCATTGGAGCCCAAA+TGG | + | chr1_1:74333936-74333955 | Msa0043230:CDS | 55.0% | |
| CTTCGCCATTATGGCGATGG+CGG | + | chr1_1:74335753-74335772 | Msa0043230:intron | 55.0% | |
| AACAGCCGCCATCGCCATAA+TGG | - | chr1_1:74335761-74335780 | None:intergenic | 55.0% | |
| GGGTCCATCCAAATGATGGC+TGG | + | chr1_1:74336248-74336267 | Msa0043230:intron | 55.0% | |
| !! | GGCAGAAGTATGGCTTTGGC+AGG | + | chr1_1:74336970-74336989 | Msa0043230:CDS | 55.0% |
| !! | GGCTTTGGCAGGTTGGTTCA+TGG | + | chr1_1:74336981-74337000 | Msa0043230:CDS | 55.0% |
| GTTCATTCAAACAGGGCCCC+AGG | + | chr1_1:74337583-74337602 | Msa0043230:intron | 55.0% | |
| TAGTCTTCTTGCGAGGCAGG+AGG | + | chr1_1:74337722-74337741 | Msa0043230:CDS | 55.0% | |
| AGTCTTCTTGCGAGGCAGGA+GGG | + | chr1_1:74337723-74337742 | Msa0043230:CDS | 55.0% | |
| CAGTAAACCGTCTGGCATGG+AGG | + | chr1_1:74338087-74338106 | Msa0043230:CDS | 55.0% | |
| TTATCGGGCGACGGCGATGA+TGG | - | chr1_1:74332164-74332183 | None:intergenic | 60.0% | |
| GCAGCGAGATTATCGGGCGA+CGG | - | chr1_1:74332173-74332192 | None:intergenic | 60.0% | |
| CTTTACTGCGGGGGAAGGAC+CGG | + | chr1_1:74333311-74333330 | Msa0043230:CDS | 60.0% | |
| AGCTCCGTGCCAAACGGGAA+TGG | + | chr1_1:74333606-74333625 | Msa0043230:CDS | 60.0% | |
| GAAGGTCCTGTCCTTGTGGC+TGG | + | chr1_1:74333669-74333688 | Msa0043230:CDS | 60.0% | |
| GAAGAGCCAGCCACAAGGAC+AGG | - | chr1_1:74333678-74333697 | None:intergenic | 60.0% | |
| GTATGAGATTGCGCGGCCTC+AGG | + | chr1_1:74334978-74334997 | Msa0043230:CDS | 60.0% | |
| ATTGCGCGGCCTCAGGTTCA+TGG | + | chr1_1:74334985-74335004 | Msa0043230:CDS | 60.0% | |
| GCAGGCCCAATCTACTGCTG+TGG | + | chr1_1:74336949-74336968 | Msa0043230:intron | 60.0% | |
| AGAAGAGCAGCGGCGAAACC+CGG | - | chr1_1:74338032-74338051 | None:intergenic | 60.0% | |
| ! | GGGCGACGGCGATGATGGTT+GGG | - | chr1_1:74332159-74332178 | None:intergenic | 65.0% |
| CGGTCCTTCCCCCGCAGTAA+AGG | - | chr1_1:74333313-74333332 | None:intergenic | 65.0% | |
| CGAGGCAGGAGGGACACAAG+CGG | + | chr1_1:74337733-74337752 | Msa0043230:CDS | 65.0% | |
| ! | CGGGCGACGGCGATGATGGT+TGG | - | chr1_1:74332160-74332179 | None:intergenic | 70.0% |
| CTGCGGGGGAAGGACCGGAA+AGG | + | chr1_1:74333316-74333335 | Msa0043230:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 74332058 | 74338366 | 74332058 | ID=Msa0043230;Name=Msa0043230 |
| chr1_1 | mRNA | 74332058 | 74338366 | 74332058 | ID=Msa0043230-mRNA-1;Parent=Msa0043230;Name=Msa0043230-mRNA-1;_AED=0.09;_eAED=0.09;_QI=158|0.88|0.9|1|1|1|10|173|816 |
| chr1_1 | exon | 74332058 | 74332356 | 74332058 | ID=Msa0043230-mRNA-1:exon:24998;Parent=Msa0043230-mRNA-1 |
| chr1_1 | exon | 74332430 | 74332457 | 74332430 | ID=Msa0043230-mRNA-1:exon:24999;Parent=Msa0043230-mRNA-1 |
| chr1_1 | exon | 74332745 | 74332830 | 74332745 | ID=Msa0043230-mRNA-1:exon:25000;Parent=Msa0043230-mRNA-1 |
| chr1_1 | exon | 74332928 | 74333081 | 74332928 | ID=Msa0043230-mRNA-1:exon:25001;Parent=Msa0043230-mRNA-1 |
| chr1_1 | exon | 74333177 | 74333337 | 74333177 | ID=Msa0043230-mRNA-1:exon:25002;Parent=Msa0043230-mRNA-1 |
| chr1_1 | exon | 74333453 | 74334124 | 74333453 | ID=Msa0043230-mRNA-1:exon:25003;Parent=Msa0043230-mRNA-1 |
| chr1_1 | exon | 74334919 | 74335240 | 74334919 | ID=Msa0043230-mRNA-1:exon:25004;Parent=Msa0043230-mRNA-1 |
| chr1_1 | exon | 74336438 | 74336655 | 74336438 | ID=Msa0043230-mRNA-1:exon:25005;Parent=Msa0043230-mRNA-1 |
| chr1_1 | exon | 74336953 | 74337130 | 74336953 | ID=Msa0043230-mRNA-1:exon:25006;Parent=Msa0043230-mRNA-1 |
| chr1_1 | exon | 74337703 | 74338366 | 74337703 | ID=Msa0043230-mRNA-1:exon:25007;Parent=Msa0043230-mRNA-1 |
| chr1_1 | five_prime_UTR | 74332058 | 74332215 | 74332058 | ID=Msa0043230-mRNA-1:five_prime_utr;Parent=Msa0043230-mRNA-1 |
| chr1_1 | CDS | 74332216 | 74332356 | 74332216 | ID=Msa0043230-mRNA-1:cds;Parent=Msa0043230-mRNA-1 |
| chr1_1 | CDS | 74332430 | 74332457 | 74332430 | ID=Msa0043230-mRNA-1:cds;Parent=Msa0043230-mRNA-1 |
| chr1_1 | CDS | 74332745 | 74332830 | 74332745 | ID=Msa0043230-mRNA-1:cds;Parent=Msa0043230-mRNA-1 |
| chr1_1 | CDS | 74332928 | 74333081 | 74332928 | ID=Msa0043230-mRNA-1:cds;Parent=Msa0043230-mRNA-1 |
| chr1_1 | CDS | 74333177 | 74333337 | 74333177 | ID=Msa0043230-mRNA-1:cds;Parent=Msa0043230-mRNA-1 |
| chr1_1 | CDS | 74333453 | 74334124 | 74333453 | ID=Msa0043230-mRNA-1:cds;Parent=Msa0043230-mRNA-1 |
| chr1_1 | CDS | 74334919 | 74335240 | 74334919 | ID=Msa0043230-mRNA-1:cds;Parent=Msa0043230-mRNA-1 |
| chr1_1 | CDS | 74336438 | 74336655 | 74336438 | ID=Msa0043230-mRNA-1:cds;Parent=Msa0043230-mRNA-1 |
| chr1_1 | CDS | 74336953 | 74337130 | 74336953 | ID=Msa0043230-mRNA-1:cds;Parent=Msa0043230-mRNA-1 |
| chr1_1 | CDS | 74337703 | 74338193 | 74337703 | ID=Msa0043230-mRNA-1:cds;Parent=Msa0043230-mRNA-1 |
| chr1_1 | three_prime_UTR | 74338194 | 74338366 | 74338194 | ID=Msa0043230-mRNA-1:three_prime_utr;Parent=Msa0043230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
