Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283910 | XP_003628195.1 | 90.196 | 510 | 12 | 4 | 1 | 472 | 41 | 550 | 0.0 | 877 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283910 | sp|Q5E915|RBBP_ARATH | 60.808 | 495 | 151 | 8 | 1 | 457 | 41 | 530 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283910 | G7L7T0 | 90.196 | 510 | 12 | 4 | 1 | 472 | 41 | 550 | 0.0 | 904 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007480 | Msa1283910 | 0.819958 | 8.837488e-53 | -8.615850e-47 |
| Msa0043670 | Msa1283910 | -0.800154 | 1.646078e-48 | -8.615850e-47 |
| Msa0074320 | Msa1283910 | 0.801194 | 1.010162e-48 | -8.615850e-47 |
| Msa0751570 | Msa1283910 | 0.829851 | 4.084402e-55 | -8.615850e-47 |
| Msa0766740 | Msa1283910 | 0.812821 | 3.495922e-51 | -8.615850e-47 |
| Msa0124990 | Msa1283910 | 0.810265 | 1.255890e-50 | -8.615850e-47 |
| Msa0169690 | Msa1283910 | 0.812151 | 4.897992e-51 | -8.615850e-47 |
| Msa0182320 | Msa1283910 | 0.805724 | 1.162393e-49 | -8.615850e-47 |
| Msa1242180 | Msa1283910 | 0.946370 | 5.255462e-105 | -8.615850e-47 |
| Msa1252190 | Msa1283910 | 0.830350 | 3.085422e-55 | -8.615850e-47 |
| Msa1283910 | Msa1292830 | 0.830706 | 2.525077e-55 | -8.615850e-47 |
| Msa1283910 | Msa1322940 | 0.820642 | 6.158750e-53 | -8.615850e-47 |
| Msa1283910 | Msa1389950 | 0.813948 | 1.976456e-51 | -8.615850e-47 |
| Msa1283910 | Msa1417420 | 0.800072 | 1.710900e-48 | -8.615850e-47 |
| Msa1283910 | Msa1440260 | -0.802238 | 6.167625e-49 | -8.615850e-47 |
| Msa1283910 | Msa1445500 | 0.989472 | 2.871322e-178 | -8.615850e-47 |
| Msa1283910 | Msa1446810 | 0.800234 | 1.585553e-48 | -8.615850e-47 |
| Msa1283910 | Msa1459380 | 0.809846 | 1.545930e-50 | -8.615850e-47 |
| Msa0428150 | Msa1283910 | 0.811083 | 8.360440e-51 | -8.615850e-47 |
| Msa0434920 | Msa1283910 | 0.802531 | 5.367837e-49 | -8.615850e-47 |
| Msa0444070 | Msa1283910 | 0.808576 | 2.893373e-50 | -8.615850e-47 |
| Msa0462500 | Msa1283910 | 0.805048 | 1.611032e-49 | -8.615850e-47 |
| Msa0475790 | Msa1283910 | 0.815018 | 1.145870e-51 | -8.615850e-47 |
| Msa1004550 | Msa1283910 | 0.813347 | 2.680165e-51 | -8.615850e-47 |
| Msa1004600 | Msa1283910 | 0.806242 | 9.045549e-50 | -8.615850e-47 |
| Msa1074810 | Msa1283910 | 0.813520 | 2.454947e-51 | -8.615850e-47 |
| Msa1091520 | Msa1283910 | 0.807407 | 5.131460e-50 | -8.615850e-47 |
| Msa0255090 | Msa1283910 | 0.809770 | 1.605982e-50 | -8.615850e-47 |
| Msa0259380 | Msa1283910 | 0.807110 | 5.930880e-50 | -8.615850e-47 |
| Msa0292400 | Msa1283910 | 0.811285 | 7.557856e-51 | -8.615850e-47 |
| Msa0294160 | Msa1283910 | 0.811138 | 8.131782e-51 | -8.615850e-47 |
| Msa0319850 | Msa1283910 | 0.803633 | 3.175887e-49 | -8.615850e-47 |
| Msa0349710 | Msa1283910 | 0.834231 | 3.377959e-56 | -8.615850e-47 |
| Msa1126510 | Msa1283910 | 0.800334 | 1.513316e-48 | -8.615850e-47 |
| Msa0532070 | Msa1283910 | 0.808658 | 2.780057e-50 | -8.615850e-47 |
| Msa0577390 | Msa1283910 | 0.813144 | 2.970054e-51 | -8.615850e-47 |
| Msa0909230 | Msa1283910 | 0.949591 | 9.326943e-108 | -8.615850e-47 |
| Msa0945110 | Msa1283910 | 0.805413 | 1.351308e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283910 | MtrunA17_Chr8g0355681 | 90.196 | 510 | 12 | 4 | 1 | 472 | 41 | 550 | 0.0 | 904 |
| Msa1283910 | MtrunA17_Chr8g0354361 | 84.510 | 510 | 40 | 5 | 1 | 472 | 41 | 549 | 0.0 | 819 |
| Msa1283910 | MtrunA17_Chr8g0355701 | 81.250 | 512 | 46 | 7 | 1 | 472 | 15 | 516 | 0.0 | 775 |
| Msa1283910 | MtrunA17_Chr5g0429441 | 71.250 | 80 | 20 | 1 | 1 | 77 | 6 | 85 | 7.55e-31 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283910 | AT3G21060.1 | 60.808 | 495 | 151 | 8 | 1 | 457 | 41 | 530 | 0.0 | 546 |
Find 124 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATGGAAGCTGTGTTATT+TGG | 0.213605 | 8_3:+25737374 | Msa1283910:CDS |
| TTCATATTCTTGCAGGTAAA+AGG | 0.213606 | 8_3:+25738521 | Msa1283910:intron |
| GCTACCACTTCTTCCGAAAA+TGG | 0.216044 | 8_3:-25738734 | None:intergenic |
| TGTGTGGCATAGTTTATATC+TGG | 0.225456 | 8_3:+25738313 | Msa1283910:intron |
| CAACCCAACATCTGAGAATA+TGG | 0.266985 | 8_3:+25739389 | Msa1283910:three_prime_UTR |
| CTCTCCATCACCACTGAAAC+AGG | 0.282312 | 8_3:-25738139 | None:intergenic |
| AAATCAATCATATTTATATA+TGG | 0.293497 | 8_3:-25739324 | None:intergenic |
| TCCTCAATCTCTTTGAAATC+AGG | 0.297441 | 8_3:-25738372 | None:intergenic |
| AATGCTCTAACTTCATCTTT+TGG | 0.301792 | 8_3:-25737991 | None:intergenic |
| CCAGTTCTCTATGTACTCTT+TGG | 0.307118 | 8_3:-25738337 | None:intergenic |
| AGAGAAGGTGTTGGAGTTGC+AGG | 0.309684 | 8_3:+25739070 | Msa1283910:CDS |
| ATATCAGAGTCGCTGAAATT+AGG | 0.326868 | 8_3:-25738596 | None:intergenic |
| TGCCAAGCAGAGAGATGATT+TGG | 0.342619 | 8_3:-25737608 | None:intergenic |
| TGATGGTTTGCTAGAGTTTG+AGG | 0.344638 | 8_3:-25739111 | None:intergenic |
| TAGATAGTTCTTCGAAGATT+GGG | 0.351030 | 8_3:+25738690 | Msa1283910:CDS |
| GATGCCACGCTAAATCAATA+AGG | 0.351990 | 8_3:-25738260 | None:intergenic |
| ATCAACAAAAGATTTAGTTT+TGG | 0.356149 | 8_3:-25739138 | None:intergenic |
| AAAAGCCTATCTTCCTGTTC+AGG | 0.357336 | 8_3:-25738668 | None:intergenic |
| ATATATAAATATGATTGATT+TGG | 0.359387 | 8_3:+25739326 | Msa1283910:three_prime_UTR |
| GGTGATGGAGAGTGGGTTGT+TGG | 0.362512 | 8_3:+25738150 | Msa1283910:CDS |
| CTCCCATCACCAGTATTTGT+TGG | 0.370774 | 8_3:+25737449 | Msa1283910:CDS |
| CGTGGCATGGTTTCTATCTC+TGG | 0.372952 | 8_3:+25737868 | Msa1283910:CDS |
| TTAGATAGTTCTTCGAAGAT+TGG | 0.374218 | 8_3:+25738689 | Msa1283910:CDS |
| TGATGGAAGCTGTGTTATTT+GGG | 0.380302 | 8_3:+25737375 | Msa1283910:CDS |
| GAGAACCTCGGTGATCTAAA+TGG | 0.383675 | 8_3:+25738027 | Msa1283910:CDS |
| TTTGCTAGCTCGTCTTCATC+CGG | 0.385250 | 8_3:+25737579 | Msa1283910:CDS |
| GAACCCTTGTTGCGTGAGAC+AGG | 0.398687 | 8_3:-25737727 | None:intergenic |
| ACACTTTGACCAACAAATAC+TGG | 0.409133 | 8_3:-25737458 | None:intergenic |
| CATTCCCGATGTTCCTGAAC+AGG | 0.418512 | 8_3:+25738655 | Msa1283910:CDS |
| GTTCCATATTCTCAGATGTT+GGG | 0.418763 | 8_3:-25739392 | None:intergenic |
| GGGCTTCCTTAGGCCCTTCA+AGG | 0.426153 | 8_3:-25738239 | None:intergenic |
| TTGCTAGCTCGTCTTCATCC+GGG | 0.427639 | 8_3:+25737580 | Msa1283910:CDS |
| CAAAGAGATTGAGGAAAATG+AGG | 0.433376 | 8_3:+25738380 | Msa1283910:CDS |
| CTTGTAATTGACAGTAAAGA+TGG | 0.434768 | 8_3:+25737838 | Msa1283910:intron |
| TTGTTGCGTGAGACAGGGTT+TGG | 0.440027 | 8_3:-25737721 | None:intergenic |
| TGAGGAAAATGAGGAGTATG+TGG | 0.443627 | 8_3:+25738389 | Msa1283910:CDS |
| TCCTGATTTCAAAGAGATTG+AGG | 0.446776 | 8_3:+25738371 | Msa1283910:CDS |
| GTGTGGCATAGTTTATATCT+GGG | 0.447441 | 8_3:+25738314 | Msa1283910:intron |
| GTGTTCAAGTCAACAATCAT+TGG | 0.449074 | 8_3:-25737649 | None:intergenic |
| GGGATGTCTTGAGTGGTAAA+AGG | 0.450323 | 8_3:+25737527 | Msa1283910:CDS |
| CTCCAAATCATCTCTCTGCT+TGG | 0.452595 | 8_3:+25737606 | Msa1283910:CDS |
| CTGTTCAGGAACATCGGGAA+TGG | 0.462989 | 8_3:-25738654 | None:intergenic |
| GATGGAGAGTGGGTTGTTGG+TGG | 0.468537 | 8_3:+25738153 | Msa1283910:CDS |
| CATGCCTCAAGTCCACTTGA+AGG | 0.471872 | 8_3:+25738776 | Msa1283910:CDS |
| TCACATACATTATCAGTGTC+AGG | 0.473182 | 8_3:-25738438 | None:intergenic |
| ATGTTCCTGAACAGGAAGAT+AGG | 0.475940 | 8_3:+25738663 | Msa1283910:CDS |
| GAGAGCACAAGATTTACATA+TGG | 0.478073 | 8_3:+25738190 | Msa1283910:CDS |
| TCGGAAGAAGTGGTAGCAAA+TGG | 0.478453 | 8_3:+25738740 | Msa1283910:CDS |
| GAATCAGCTGGCTGCAATGA+TGG | 0.479058 | 8_3:+25737358 | None:intergenic |
| TGTTCCATATTCTCAGATGT+TGG | 0.481603 | 8_3:-25739393 | None:intergenic |
| CATCTTGTGAAAATCCTTGA+AGG | 0.482006 | 8_3:+25738225 | Msa1283910:CDS |
| CCAAAGAGTACATAGAGAAC+TGG | 0.483830 | 8_3:+25738337 | Msa1283910:CDS |
| TCTTCCTGTTCAGGAACATC+GGG | 0.496645 | 8_3:-25738659 | None:intergenic |
| TGTTCAGGAACATCGGGAAT+GGG | 0.501740 | 8_3:-25738653 | None:intergenic |
| TGACCAACAAATACTGGTGA+TGG | 0.505055 | 8_3:-25737452 | None:intergenic |
| TGAAGAACATTGTATTCAGC+AGG | 0.511366 | 8_3:+25737902 | Msa1283910:CDS |
| ATGCCACGCTAAATCAATAA+GGG | 0.511908 | 8_3:-25738259 | None:intergenic |
| AACATTGTATTCAGCAGGAA+TGG | 0.517859 | 8_3:+25737907 | Msa1283910:CDS |
| GAGACAGGGTTTGGTCCACT+TGG | 0.523067 | 8_3:-25737712 | None:intergenic |
| TCACGCAACAAGGGTTCTGA+TGG | 0.523362 | 8_3:+25737733 | Msa1283910:CDS |
| AAATCAATAAGGGCTTCCTT+AGG | 0.523475 | 8_3:-25738249 | None:intergenic |
| GCACCCTGTTTCAGTGGTGA+TGG | 0.531362 | 8_3:+25738135 | Msa1283910:CDS |
| AACTCCAACACCTTCTCTGA+TGG | 0.531649 | 8_3:-25739065 | None:intergenic |
| GATGAAGACGAGCTAGCAAA+GGG | 0.534466 | 8_3:-25737576 | None:intergenic |
| GTTTCAGTGGTGATGGAGAG+TGG | 0.534496 | 8_3:+25738142 | Msa1283910:CDS |
| CAAGCAGAGAGATGATTTGG+AGG | 0.545050 | 8_3:-25737605 | None:intergenic |
| ATCTTCCTGTTCAGGAACAT+CGG | 0.551073 | 8_3:-25738660 | None:intergenic |
| ATGCAATCACGAAAGTGCAC+TGG | 0.552939 | 8_3:+25738109 | Msa1283910:CDS |
| AGAGCACAAGATTTACATAT+GGG | 0.555323 | 8_3:+25738191 | Msa1283910:CDS |
| GAAAATCCTTGAAGGGCCTA+AGG | 0.556664 | 8_3:+25738233 | Msa1283910:CDS |
| AACCCTTGTTGCGTGAGACA+GGG | 0.563354 | 8_3:-25737726 | None:intergenic |
| TGCTAGCTCGTCTTCATCCG+GGG | 0.567258 | 8_3:+25737581 | Msa1283910:CDS |
| CTTCAAGTGGACTTGAGGCA+TGG | 0.571372 | 8_3:-25738775 | None:intergenic |
| AGATAGTTCTTCGAAGATTG+GGG | 0.573049 | 8_3:+25738691 | Msa1283910:CDS |
| AAACCCTGTCTCACGCAACA+AGG | 0.574516 | 8_3:+25737723 | Msa1283910:CDS |
| ATTGGGGACAGCAATAACTC+TGG | 0.576784 | 8_3:+25738707 | Msa1283910:CDS |
| TTTCAGTGGTGATGGAGAGT+GGG | 0.579791 | 8_3:+25738143 | Msa1283910:CDS |
| TGGAAGGCACCCTGTTTCAG+TGG | 0.579970 | 8_3:+25738129 | Msa1283910:CDS |
| ATTTACATATGGGATAGAGC+TGG | 0.580981 | 8_3:+25738201 | Msa1283910:CDS |
| TCTGCTGTCATTCATCAGAC+AGG | 0.583056 | 8_3:-25739196 | None:intergenic |
| ATTACCTTCAAGTGGACTTG+AGG | 0.584311 | 8_3:-25738780 | None:intergenic |
| ATTATTTACAGATGATGCTG+TGG | 0.585458 | 8_3:+25739016 | Msa1283910:intron |
| AAATGGTGTTGAGAAGTTGA+AGG | 0.591187 | 8_3:+25738044 | Msa1283910:CDS |
| ATCTGATGTCAATGAAGATG+AGG | 0.592161 | 8_3:+25738544 | Msa1283910:CDS |
| GTTGGTGGTTCTGCTAGCAA+AGG | 0.593351 | 8_3:+25738168 | Msa1283910:CDS |
| GGCGTGACATTACCTTCAAG+TGG | 0.593844 | 8_3:-25738788 | None:intergenic |
| TGGGAACAAGAATTAAAAGA+AGG | 0.594470 | 8_3:+25739036 | Msa1283910:CDS |
| TTACTAAAACATGCAGCAGT+AGG | 0.595182 | 8_3:-25737772 | None:intergenic |
| GTTTGATTTAATATACAGCA+AGG | 0.600378 | 8_3:+25739428 | Msa1283910:three_prime_UTR |
| GACCAACAAATACTGGTGAT+GGG | 0.601286 | 8_3:-25737451 | None:intergenic |
| TAGATAACGTAGCTCTTCCT+CGG | 0.601900 | 8_3:-25738621 | None:intergenic |
| GGATGAAGACGAGCTAGCAA+AGG | 0.602138 | 8_3:-25737577 | None:intergenic |
| ATCTTGTGAAAATCCTTGAA+GGG | 0.602213 | 8_3:+25738226 | Msa1283910:CDS |
| GGCATGGTTTCTATCTCTGG+TGG | 0.603497 | 8_3:+25737871 | Msa1283910:CDS |
| ACATGCAGCAGTAGGTGTGA+AGG | 0.605285 | 8_3:-25737764 | None:intergenic |
| GAAACCATCAGAGAAGGTGT+TGG | 0.608768 | 8_3:+25739061 | Msa1283910:CDS |
| AGATGGTGAGGTGCGTGGCA+TGG | 0.609126 | 8_3:+25737855 | Msa1283910:CDS |
| TGACAAGTCGTTATCCCTGT+GGG | 0.614779 | 8_3:+25737507 | Msa1283910:CDS |
| TACCACTCAAGACATCCCAC+AGG | 0.615382 | 8_3:-25737522 | None:intergenic |
| AACCCTGTCTCACGCAACAA+GGG | 0.615851 | 8_3:+25737724 | Msa1283910:CDS |
| AGAGATGATTTGGAGGACCC+CGG | 0.619630 | 8_3:-25737598 | None:intergenic |
| TGACATTGTGACAGTCGAGA+AGG | 0.620507 | 8_3:+25738571 | Msa1283910:CDS |
| AAGGCGGAAACCATCAGAGA+AGG | 0.621405 | 8_3:+25739055 | Msa1283910:CDS |
| TTAATATACAGCAAGGCCAA+TGG | 0.622591 | 8_3:+25739435 | Msa1283910:three_prime_UTR |
| AGTATTTGTTGGTCAAAGTG+TGG | 0.624701 | 8_3:+25737460 | Msa1283910:CDS |
| CTGACAAGTCGTTATCCCTG+TGG | 0.627369 | 8_3:+25737506 | Msa1283910:CDS |
| ATCATTGGAGCACATGAGAG+AGG | 0.635797 | 8_3:-25737634 | None:intergenic |
| ACATCGGGAATGGGAGACAC+TGG | 0.636235 | 8_3:-25738644 | None:intergenic |
| TTATTTACAGATGATGCTGT+GGG | 0.638305 | 8_3:+25739017 | Msa1283910:intron |
| TCTCCATCACCACTGAAACA+GGG | 0.640101 | 8_3:-25738138 | None:intergenic |
| GAACAAGAATTAAAAGAAGG+CGG | 0.644668 | 8_3:+25739039 | Msa1283910:CDS |
| TCCCTGTGGGATGTCTTGAG+TGG | 0.645082 | 8_3:+25737520 | Msa1283910:CDS |
| TCTGTCTCTGACAAACCAAG+TGG | 0.648181 | 8_3:+25737697 | Msa1283910:CDS |
| AAGCCCTTATTGATTTAGCG+TGG | 0.655079 | 8_3:+25738256 | Msa1283910:CDS |
| TGCAGCAGTAGGTGTGAAGG+AGG | 0.657772 | 8_3:-25737761 | None:intergenic |
| ACCACTCAAGACATCCCACA+GGG | 0.671936 | 8_3:-25737521 | None:intergenic |
| CAGCGACTCTGATATGTCCG+AGG | 0.676024 | 8_3:+25738604 | Msa1283910:CDS |
| GCTGAATTGAACGAGAACCT+CGG | 0.676455 | 8_3:+25738015 | Msa1283910:CDS |
| GTTGAGAAGTTGAAGGCTGT+AGG | 0.680893 | 8_3:+25738051 | Msa1283910:CDS |
| AGTAAAGATGGTGAGGTGCG+TGG | 0.690847 | 8_3:+25737850 | Msa1283910:intron |
| AATCACGAAAGTGCACTGGA+AGG | 0.694138 | 8_3:+25738113 | Msa1283910:CDS |
| AATTGACAGTAAAGATGGTG+AGG | 0.704790 | 8_3:+25737843 | Msa1283910:intron |
| CAACACCATTTAGATCACCG+AGG | 0.738329 | 8_3:-25738032 | None:intergenic |
| ATGAAGACGAGCTAGCAAAG+GGG | 0.760208 | 8_3:-25737575 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCAATCATATTTATATA+TGG | - | chr8_3:25739327-25739346 | None:intergenic | 10.0% |
| !! | ATATATAAATATGATTGATT+TGG | + | chr8_3:25739326-25739345 | Msa1283910:three_prime_UTR | 10.0% |
| !! | AAATCAATCATATTTATATA+TGG | - | chr8_3:25739327-25739346 | None:intergenic | 10.0% |
| !! | ATATATAAATATGATTGATT+TGG | + | chr8_3:25739326-25739345 | Msa1283910:three_prime_UTR | 10.0% |
| !!! | TTCTTTTCTTTTCCATTTTA+TGG | + | chr8_3:25738487-25738506 | Msa1283910:intron | 20.0% |
| !! | AACAGTTCAATTGAAAAATA+GGG | - | chr8_3:25738857-25738876 | None:intergenic | 20.0% |
| !!! | ATCAACAAAAGATTTAGTTT+TGG | - | chr8_3:25739141-25739160 | None:intergenic | 20.0% |
| !!! | TTCTTTTCTTTTCCATTTTA+TGG | + | chr8_3:25738487-25738506 | Msa1283910:intron | 20.0% |
| !! | AACAGTTCAATTGAAAAATA+GGG | - | chr8_3:25738857-25738876 | None:intergenic | 20.0% |
| !!! | ATCAACAAAAGATTTAGTTT+TGG | - | chr8_3:25739141-25739160 | None:intergenic | 20.0% |
| ! | TAATGTATGTGAACGTTATA+TGG | + | chr8_3:25738449-25738468 | Msa1283910:intron | 25.0% |
| !! | TGTTACAAGCATATTTTGTA+TGG | - | chr8_3:25738812-25738831 | None:intergenic | 25.0% |
| ! | CAACAGTTCAATTGAAAAAT+AGG | - | chr8_3:25738858-25738877 | None:intergenic | 25.0% |
| ! | TCATCTGTAAATAATGTTGA+AGG | - | chr8_3:25739011-25739030 | None:intergenic | 25.0% |
| !! | GTTTGATTTAATATACAGCA+AGG | + | chr8_3:25739428-25739447 | Msa1283910:three_prime_UTR | 25.0% |
| ! | TAATGTATGTGAACGTTATA+TGG | + | chr8_3:25738449-25738468 | Msa1283910:intron | 25.0% |
| !! | TGTTACAAGCATATTTTGTA+TGG | - | chr8_3:25738812-25738831 | None:intergenic | 25.0% |
| ! | CAACAGTTCAATTGAAAAAT+AGG | - | chr8_3:25738858-25738877 | None:intergenic | 25.0% |
| ! | TCATCTGTAAATAATGTTGA+AGG | - | chr8_3:25739011-25739030 | None:intergenic | 25.0% |
| !! | GTTTGATTTAATATACAGCA+AGG | + | chr8_3:25739428-25739447 | Msa1283910:three_prime_UTR | 25.0% |
| !!! | TTATTTGGGATTTTGAAGTC+AGG | + | chr8_3:25737389-25737408 | Msa1283910:CDS | 30.0% |
| !!! | TATTTGGGATTTTGAAGTCA+GGG | + | chr8_3:25737390-25737409 | Msa1283910:CDS | 30.0% |
| ! | TTTTAGTAAGTATGGAAACC+TGG | + | chr8_3:25737786-25737805 | Msa1283910:intron | 30.0% |
| CTTGTAATTGACAGTAAAGA+TGG | + | chr8_3:25737838-25737857 | Msa1283910:intron | 30.0% | |
| ! | AATGCTCTAACTTCATCTTT+TGG | - | chr8_3:25737994-25738013 | None:intergenic | 30.0% |
| AGAGCACAAGATTTACATAT+GGG | + | chr8_3:25738191-25738210 | Msa1283910:CDS | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | + | chr8_3:25738226-25738245 | Msa1283910:CDS | 30.0% | |
| AAAGAAACAGACACAACAAT+TGG | - | chr8_3:25738294-25738313 | None:intergenic | 30.0% | |
| ACTTGGTTAAGACCATAAAA+TGG | - | chr8_3:25738502-25738521 | None:intergenic | 30.0% | |
| TTCATATTCTTGCAGGTAAA+AGG | + | chr8_3:25738521-25738540 | Msa1283910:intron | 30.0% | |
| TTAGATAGTTCTTCGAAGAT+TGG | + | chr8_3:25738689-25738708 | Msa1283910:CDS | 30.0% | |
| TAGATAGTTCTTCGAAGATT+GGG | + | chr8_3:25738690-25738709 | Msa1283910:CDS | 30.0% | |
| GAAGAAACCTAAACTCATAA+AGG | - | chr8_3:25738896-25738915 | None:intergenic | 30.0% | |
| ! | TCAAATTCTGAGAACAACAT+GGG | - | chr8_3:25738919-25738938 | None:intergenic | 30.0% |
| ! | TTCAAATTCTGAGAACAACA+TGG | - | chr8_3:25738920-25738939 | None:intergenic | 30.0% |
| ATTATTTACAGATGATGCTG+TGG | + | chr8_3:25739016-25739035 | Msa1283910:intron | 30.0% | |
| TTATTTACAGATGATGCTGT+GGG | + | chr8_3:25739017-25739036 | Msa1283910:intron | 30.0% | |
| TGGGAACAAGAATTAAAAGA+AGG | + | chr8_3:25739036-25739055 | Msa1283910:CDS | 30.0% | |
| GAACAAGAATTAAAAGAAGG+CGG | + | chr8_3:25739039-25739058 | Msa1283910:CDS | 30.0% | |
| !!! | GATTTAGTTTTGGTTCTTGA+TGG | - | chr8_3:25739131-25739150 | None:intergenic | 30.0% |
| ! | TTGCTTAGCAAATTTTCATC+AGG | + | chr8_3:25739291-25739310 | Msa1283910:three_prime_UTR | 30.0% |
| ! | TTAGCAAATTTTCATCAGGT+GGG | + | chr8_3:25739295-25739314 | Msa1283910:three_prime_UTR | 30.0% |
| !!! | TTATTTGGGATTTTGAAGTC+AGG | + | chr8_3:25737389-25737408 | Msa1283910:CDS | 30.0% |
| !!! | TATTTGGGATTTTGAAGTCA+GGG | + | chr8_3:25737390-25737409 | Msa1283910:CDS | 30.0% |
| ! | TTTTAGTAAGTATGGAAACC+TGG | + | chr8_3:25737786-25737805 | Msa1283910:intron | 30.0% |
| CTTGTAATTGACAGTAAAGA+TGG | + | chr8_3:25737838-25737857 | Msa1283910:intron | 30.0% | |
| ! | AATGCTCTAACTTCATCTTT+TGG | - | chr8_3:25737994-25738013 | None:intergenic | 30.0% |
| AGAGCACAAGATTTACATAT+GGG | + | chr8_3:25738191-25738210 | Msa1283910:CDS | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | + | chr8_3:25738226-25738245 | Msa1283910:CDS | 30.0% | |
| AAAGAAACAGACACAACAAT+TGG | - | chr8_3:25738294-25738313 | None:intergenic | 30.0% | |
| ACTTGGTTAAGACCATAAAA+TGG | - | chr8_3:25738502-25738521 | None:intergenic | 30.0% | |
| TTCATATTCTTGCAGGTAAA+AGG | + | chr8_3:25738521-25738540 | Msa1283910:intron | 30.0% | |
| TTAGATAGTTCTTCGAAGAT+TGG | + | chr8_3:25738689-25738708 | Msa1283910:CDS | 30.0% | |
| TAGATAGTTCTTCGAAGATT+GGG | + | chr8_3:25738690-25738709 | Msa1283910:CDS | 30.0% | |
| GAAGAAACCTAAACTCATAA+AGG | - | chr8_3:25738896-25738915 | None:intergenic | 30.0% | |
| ! | TCAAATTCTGAGAACAACAT+GGG | - | chr8_3:25738919-25738938 | None:intergenic | 30.0% |
| ! | TTCAAATTCTGAGAACAACA+TGG | - | chr8_3:25738920-25738939 | None:intergenic | 30.0% |
| ATTATTTACAGATGATGCTG+TGG | + | chr8_3:25739016-25739035 | Msa1283910:intron | 30.0% | |
| TTATTTACAGATGATGCTGT+GGG | + | chr8_3:25739017-25739036 | Msa1283910:intron | 30.0% | |
| TGGGAACAAGAATTAAAAGA+AGG | + | chr8_3:25739036-25739055 | Msa1283910:CDS | 30.0% | |
| GAACAAGAATTAAAAGAAGG+CGG | + | chr8_3:25739039-25739058 | Msa1283910:CDS | 30.0% | |
| !!! | GATTTAGTTTTGGTTCTTGA+TGG | - | chr8_3:25739131-25739150 | None:intergenic | 30.0% |
| ! | TTGCTTAGCAAATTTTCATC+AGG | + | chr8_3:25739291-25739310 | Msa1283910:three_prime_UTR | 30.0% |
| ! | TTAGCAAATTTTCATCAGGT+GGG | + | chr8_3:25739295-25739314 | Msa1283910:three_prime_UTR | 30.0% |
| ! | ATGATGGAAGCTGTGTTATT+TGG | + | chr8_3:25737374-25737393 | Msa1283910:CDS | 35.0% |
| !! | TGATGGAAGCTGTGTTATTT+GGG | + | chr8_3:25737375-25737394 | Msa1283910:CDS | 35.0% |
| !!! | ATTTGGGATTTTGAAGTCAG+GGG | + | chr8_3:25737391-25737410 | Msa1283910:CDS | 35.0% |
| ACACTTTGACCAACAAATAC+TGG | - | chr8_3:25737461-25737480 | None:intergenic | 35.0% | |
| ! | AGTATTTGTTGGTCAAAGTG+TGG | + | chr8_3:25737460-25737479 | Msa1283910:CDS | 35.0% |
| GTGTTCAAGTCAACAATCAT+TGG | - | chr8_3:25737652-25737671 | None:intergenic | 35.0% | |
| TTACTAAAACATGCAGCAGT+AGG | - | chr8_3:25737775-25737794 | None:intergenic | 35.0% | |
| !!! | GCTGCATGTTTTAGTAAGTA+TGG | + | chr8_3:25737778-25737797 | Msa1283910:intron | 35.0% |
| TATGGAAACCTGGTTTATGT+GGG | + | chr8_3:25737796-25737815 | Msa1283910:intron | 35.0% | |
| AATTGACAGTAAAGATGGTG+AGG | + | chr8_3:25737843-25737862 | Msa1283910:intron | 35.0% | |
| TGAAGAACATTGTATTCAGC+AGG | + | chr8_3:25737902-25737921 | Msa1283910:CDS | 35.0% | |
| AACATTGTATTCAGCAGGAA+TGG | + | chr8_3:25737907-25737926 | Msa1283910:CDS | 35.0% | |
| ! | AAATGGTGTTGAGAAGTTGA+AGG | + | chr8_3:25738044-25738063 | Msa1283910:CDS | 35.0% |
| TGATTGCATCTTGAAACTCA+CGG | - | chr8_3:25738098-25738117 | None:intergenic | 35.0% | |
| ! | GAGAGCACAAGATTTACATA+TGG | + | chr8_3:25738190-25738209 | Msa1283910:CDS | 35.0% |
| ATTTACATATGGGATAGAGC+TGG | + | chr8_3:25738201-25738220 | Msa1283910:CDS | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | + | chr8_3:25738225-25738244 | Msa1283910:CDS | 35.0% | |
| AAATCAATAAGGGCTTCCTT+AGG | - | chr8_3:25738252-25738271 | None:intergenic | 35.0% | |
| ATGCCACGCTAAATCAATAA+GGG | - | chr8_3:25738262-25738281 | None:intergenic | 35.0% | |
| TGTGTGGCATAGTTTATATC+TGG | + | chr8_3:25738313-25738332 | Msa1283910:intron | 35.0% | |
| GTGTGGCATAGTTTATATCT+GGG | + | chr8_3:25738314-25738333 | Msa1283910:intron | 35.0% | |
| TCCTGATTTCAAAGAGATTG+AGG | + | chr8_3:25738371-25738390 | Msa1283910:CDS | 35.0% | |
| !! | TCCTCAATCTCTTTGAAATC+AGG | - | chr8_3:25738375-25738394 | None:intergenic | 35.0% |
| CAAAGAGATTGAGGAAAATG+AGG | + | chr8_3:25738380-25738399 | Msa1283910:CDS | 35.0% | |
| TCACATACATTATCAGTGTC+AGG | - | chr8_3:25738441-25738460 | None:intergenic | 35.0% | |
| TGTGAACGTTATATGGTCAT+AGG | + | chr8_3:25738456-25738475 | Msa1283910:intron | 35.0% | |
| AACCAAGTTCATATTCTTGC+AGG | + | chr8_3:25738514-25738533 | Msa1283910:intron | 35.0% | |
| TACCTGCAAGAATATGAACT+TGG | - | chr8_3:25738519-25738538 | None:intergenic | 35.0% | |
| ATCTGATGTCAATGAAGATG+AGG | + | chr8_3:25738544-25738563 | Msa1283910:CDS | 35.0% | |
| ATATCAGAGTCGCTGAAATT+AGG | - | chr8_3:25738599-25738618 | None:intergenic | 35.0% | |
| AGATAGTTCTTCGAAGATTG+GGG | + | chr8_3:25738691-25738710 | Msa1283910:CDS | 35.0% | |
| ! | TAACTCTGGATCACCATTTT+CGG | + | chr8_3:25738721-25738740 | Msa1283910:CDS | 35.0% |
| AACTGTTGAAACACTTTGTG+AGG | + | chr8_3:25738870-25738889 | Msa1283910:intron | 35.0% | |
| ! | CAAATTCTGAGAACAACATG+GGG | - | chr8_3:25738918-25738937 | None:intergenic | 35.0% |
| !! | TCTTTTGTTGATGAGAGCAA+TGG | + | chr8_3:25739149-25739168 | Msa1283910:CDS | 35.0% |
| ! | CTTAGCAAATTTTCATCAGG+TGG | + | chr8_3:25739294-25739313 | Msa1283910:three_prime_UTR | 35.0% |
| GTTCCATATTCTCAGATGTT+GGG | - | chr8_3:25739395-25739414 | None:intergenic | 35.0% | |
| TGTTCCATATTCTCAGATGT+TGG | - | chr8_3:25739396-25739415 | None:intergenic | 35.0% | |
| TTAATATACAGCAAGGCCAA+TGG | + | chr8_3:25739435-25739454 | Msa1283910:three_prime_UTR | 35.0% | |
| ! | ATGATGGAAGCTGTGTTATT+TGG | + | chr8_3:25737374-25737393 | Msa1283910:CDS | 35.0% |
| !! | TGATGGAAGCTGTGTTATTT+GGG | + | chr8_3:25737375-25737394 | Msa1283910:CDS | 35.0% |
| !!! | ATTTGGGATTTTGAAGTCAG+GGG | + | chr8_3:25737391-25737410 | Msa1283910:CDS | 35.0% |
| ACACTTTGACCAACAAATAC+TGG | - | chr8_3:25737461-25737480 | None:intergenic | 35.0% | |
| ! | AGTATTTGTTGGTCAAAGTG+TGG | + | chr8_3:25737460-25737479 | Msa1283910:CDS | 35.0% |
| GTGTTCAAGTCAACAATCAT+TGG | - | chr8_3:25737652-25737671 | None:intergenic | 35.0% | |
| TTACTAAAACATGCAGCAGT+AGG | - | chr8_3:25737775-25737794 | None:intergenic | 35.0% | |
| !!! | GCTGCATGTTTTAGTAAGTA+TGG | + | chr8_3:25737778-25737797 | Msa1283910:intron | 35.0% |
| TATGGAAACCTGGTTTATGT+GGG | + | chr8_3:25737796-25737815 | Msa1283910:intron | 35.0% | |
| AATTGACAGTAAAGATGGTG+AGG | + | chr8_3:25737843-25737862 | Msa1283910:intron | 35.0% | |
| TGAAGAACATTGTATTCAGC+AGG | + | chr8_3:25737902-25737921 | Msa1283910:CDS | 35.0% | |
| AACATTGTATTCAGCAGGAA+TGG | + | chr8_3:25737907-25737926 | Msa1283910:CDS | 35.0% | |
| ! | AAATGGTGTTGAGAAGTTGA+AGG | + | chr8_3:25738044-25738063 | Msa1283910:CDS | 35.0% |
| TGATTGCATCTTGAAACTCA+CGG | - | chr8_3:25738098-25738117 | None:intergenic | 35.0% | |
| ! | GAGAGCACAAGATTTACATA+TGG | + | chr8_3:25738190-25738209 | Msa1283910:CDS | 35.0% |
| ATTTACATATGGGATAGAGC+TGG | + | chr8_3:25738201-25738220 | Msa1283910:CDS | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | + | chr8_3:25738225-25738244 | Msa1283910:CDS | 35.0% | |
| AAATCAATAAGGGCTTCCTT+AGG | - | chr8_3:25738252-25738271 | None:intergenic | 35.0% | |
| ATGCCACGCTAAATCAATAA+GGG | - | chr8_3:25738262-25738281 | None:intergenic | 35.0% | |
| TGTGTGGCATAGTTTATATC+TGG | + | chr8_3:25738313-25738332 | Msa1283910:intron | 35.0% | |
| GTGTGGCATAGTTTATATCT+GGG | + | chr8_3:25738314-25738333 | Msa1283910:intron | 35.0% | |
| TCCTGATTTCAAAGAGATTG+AGG | + | chr8_3:25738371-25738390 | Msa1283910:CDS | 35.0% | |
| !! | TCCTCAATCTCTTTGAAATC+AGG | - | chr8_3:25738375-25738394 | None:intergenic | 35.0% |
| CAAAGAGATTGAGGAAAATG+AGG | + | chr8_3:25738380-25738399 | Msa1283910:CDS | 35.0% | |
| TCACATACATTATCAGTGTC+AGG | - | chr8_3:25738441-25738460 | None:intergenic | 35.0% | |
| TGTGAACGTTATATGGTCAT+AGG | + | chr8_3:25738456-25738475 | Msa1283910:intron | 35.0% | |
| AACCAAGTTCATATTCTTGC+AGG | + | chr8_3:25738514-25738533 | Msa1283910:intron | 35.0% | |
| TACCTGCAAGAATATGAACT+TGG | - | chr8_3:25738519-25738538 | None:intergenic | 35.0% | |
| ATCTGATGTCAATGAAGATG+AGG | + | chr8_3:25738544-25738563 | Msa1283910:CDS | 35.0% | |
| ATATCAGAGTCGCTGAAATT+AGG | - | chr8_3:25738599-25738618 | None:intergenic | 35.0% | |
| AGATAGTTCTTCGAAGATTG+GGG | + | chr8_3:25738691-25738710 | Msa1283910:CDS | 35.0% | |
| ! | TAACTCTGGATCACCATTTT+CGG | + | chr8_3:25738721-25738740 | Msa1283910:CDS | 35.0% |
| AACTGTTGAAACACTTTGTG+AGG | + | chr8_3:25738870-25738889 | Msa1283910:intron | 35.0% | |
| ! | CAAATTCTGAGAACAACATG+GGG | - | chr8_3:25738918-25738937 | None:intergenic | 35.0% |
| !! | TCTTTTGTTGATGAGAGCAA+TGG | + | chr8_3:25739149-25739168 | Msa1283910:CDS | 35.0% |
| ! | CTTAGCAAATTTTCATCAGG+TGG | + | chr8_3:25739294-25739313 | Msa1283910:three_prime_UTR | 35.0% |
| GTTCCATATTCTCAGATGTT+GGG | - | chr8_3:25739395-25739414 | None:intergenic | 35.0% | |
| TGTTCCATATTCTCAGATGT+TGG | - | chr8_3:25739396-25739415 | None:intergenic | 35.0% | |
| TTAATATACAGCAAGGCCAA+TGG | + | chr8_3:25739435-25739454 | Msa1283910:three_prime_UTR | 35.0% | |
| GACCAACAAATACTGGTGAT+GGG | - | chr8_3:25737454-25737473 | None:intergenic | 40.0% | |
| TGACCAACAAATACTGGTGA+TGG | - | chr8_3:25737455-25737474 | None:intergenic | 40.0% | |
| GTATGGAAACCTGGTTTATG+TGG | + | chr8_3:25737795-25737814 | Msa1283910:intron | 40.0% | |
| GTTTATGTGGGAAACTCGAA+AGG | + | chr8_3:25737808-25737827 | Msa1283910:intron | 40.0% | |
| ! | GCTCTAACTTCATCTTTTGG+TGG | - | chr8_3:25737991-25738010 | None:intergenic | 40.0% |
| !! | AAGCCCTTATTGATTTAGCG+TGG | + | chr8_3:25738256-25738275 | Msa1283910:CDS | 40.0% |
| GATGCCACGCTAAATCAATA+AGG | - | chr8_3:25738263-25738282 | None:intergenic | 40.0% | |
| ! | GTTGTGTCTGTTTCTTTGTG+TGG | + | chr8_3:25738297-25738316 | Msa1283910:intron | 40.0% |
| CCAGTTCTCTATGTACTCTT+TGG | - | chr8_3:25738340-25738359 | None:intergenic | 40.0% | |
| ! | CCAAAGAGTACATAGAGAAC+TGG | + | chr8_3:25738337-25738356 | Msa1283910:CDS | 40.0% |
| ! | TGAGGAAAATGAGGAGTATG+TGG | + | chr8_3:25738389-25738408 | Msa1283910:CDS | 40.0% |
| TAGATAACGTAGCTCTTCCT+CGG | - | chr8_3:25738624-25738643 | None:intergenic | 40.0% | |
| ATCTTCCTGTTCAGGAACAT+CGG | - | chr8_3:25738663-25738682 | None:intergenic | 40.0% | |
| ATGTTCCTGAACAGGAAGAT+AGG | + | chr8_3:25738663-25738682 | Msa1283910:CDS | 40.0% | |
| AAAAGCCTATCTTCCTGTTC+AGG | - | chr8_3:25738671-25738690 | None:intergenic | 40.0% | |
| ! | ATCACCATTTTCGGAAGAAG+TGG | + | chr8_3:25738730-25738749 | Msa1283910:CDS | 40.0% |
| ! | ATTACCTTCAAGTGGACTTG+AGG | - | chr8_3:25738783-25738802 | None:intergenic | 40.0% |
| TGTGAGGCCTTTATGAGTTT+AGG | + | chr8_3:25738886-25738905 | Msa1283910:intron | 40.0% | |
| !! | TGATGGTTTGCTAGAGTTTG+AGG | - | chr8_3:25739114-25739133 | None:intergenic | 40.0% |
| CAACCCAACATCTGAGAATA+TGG | + | chr8_3:25739389-25739408 | Msa1283910:three_prime_UTR | 40.0% | |
| CAATGGCAAAAGTTATCCAC+AGG | + | chr8_3:25739452-25739471 | Msa1283910:three_prime_UTR | 40.0% | |
| GACCAACAAATACTGGTGAT+GGG | - | chr8_3:25737454-25737473 | None:intergenic | 40.0% | |
| TGACCAACAAATACTGGTGA+TGG | - | chr8_3:25737455-25737474 | None:intergenic | 40.0% | |
| GTATGGAAACCTGGTTTATG+TGG | + | chr8_3:25737795-25737814 | Msa1283910:intron | 40.0% | |
| GTTTATGTGGGAAACTCGAA+AGG | + | chr8_3:25737808-25737827 | Msa1283910:intron | 40.0% | |
| ! | GCTCTAACTTCATCTTTTGG+TGG | - | chr8_3:25737991-25738010 | None:intergenic | 40.0% |
| !! | AAGCCCTTATTGATTTAGCG+TGG | + | chr8_3:25738256-25738275 | Msa1283910:CDS | 40.0% |
| GATGCCACGCTAAATCAATA+AGG | - | chr8_3:25738263-25738282 | None:intergenic | 40.0% | |
| ! | GTTGTGTCTGTTTCTTTGTG+TGG | + | chr8_3:25738297-25738316 | Msa1283910:intron | 40.0% |
| CCAGTTCTCTATGTACTCTT+TGG | - | chr8_3:25738340-25738359 | None:intergenic | 40.0% | |
| ! | CCAAAGAGTACATAGAGAAC+TGG | + | chr8_3:25738337-25738356 | Msa1283910:CDS | 40.0% |
| ! | TGAGGAAAATGAGGAGTATG+TGG | + | chr8_3:25738389-25738408 | Msa1283910:CDS | 40.0% |
| TAGATAACGTAGCTCTTCCT+CGG | - | chr8_3:25738624-25738643 | None:intergenic | 40.0% | |
| ATCTTCCTGTTCAGGAACAT+CGG | - | chr8_3:25738663-25738682 | None:intergenic | 40.0% | |
| ATGTTCCTGAACAGGAAGAT+AGG | + | chr8_3:25738663-25738682 | Msa1283910:CDS | 40.0% | |
| AAAAGCCTATCTTCCTGTTC+AGG | - | chr8_3:25738671-25738690 | None:intergenic | 40.0% | |
| ! | ATCACCATTTTCGGAAGAAG+TGG | + | chr8_3:25738730-25738749 | Msa1283910:CDS | 40.0% |
| ! | ATTACCTTCAAGTGGACTTG+AGG | - | chr8_3:25738783-25738802 | None:intergenic | 40.0% |
| TGTGAGGCCTTTATGAGTTT+AGG | + | chr8_3:25738886-25738905 | Msa1283910:intron | 40.0% | |
| !! | TGATGGTTTGCTAGAGTTTG+AGG | - | chr8_3:25739114-25739133 | None:intergenic | 40.0% |
| CAACCCAACATCTGAGAATA+TGG | + | chr8_3:25739389-25739408 | Msa1283910:three_prime_UTR | 40.0% | |
| CTCCCATCACCAGTATTTGT+TGG | + | chr8_3:25737449-25737468 | Msa1283910:CDS | 45.0% | |
| TGACAAGTCGTTATCCCTGT+GGG | + | chr8_3:25737507-25737526 | Msa1283910:CDS | 45.0% | |
| GGGATGTCTTGAGTGGTAAA+AGG | + | chr8_3:25737527-25737546 | Msa1283910:CDS | 45.0% | |
| ATGAAGACGAGCTAGCAAAG+GGG | - | chr8_3:25737578-25737597 | None:intergenic | 45.0% | |
| GATGAAGACGAGCTAGCAAA+GGG | - | chr8_3:25737579-25737598 | None:intergenic | 45.0% | |
| TTTGCTAGCTCGTCTTCATC+CGG | + | chr8_3:25737579-25737598 | Msa1283910:CDS | 45.0% | |
| ! | CAAGCAGAGAGATGATTTGG+AGG | - | chr8_3:25737608-25737627 | None:intergenic | 45.0% |
| CTCCAAATCATCTCTCTGCT+TGG | + | chr8_3:25737606-25737625 | Msa1283910:CDS | 45.0% | |
| TGCCAAGCAGAGAGATGATT+TGG | - | chr8_3:25737611-25737630 | None:intergenic | 45.0% | |
| ATCATTGGAGCACATGAGAG+AGG | - | chr8_3:25737637-25737656 | None:intergenic | 45.0% | |
| TCTGTCTCTGACAAACCAAG+TGG | + | chr8_3:25737697-25737716 | Msa1283910:CDS | 45.0% | |
| TCGAGTTTCCCACATAAACC+AGG | - | chr8_3:25737807-25737826 | None:intergenic | 45.0% | |
| GCTGAATTGAACGAGAACCT+CGG | + | chr8_3:25738015-25738034 | Msa1283910:CDS | 45.0% | |
| GAGAACCTCGGTGATCTAAA+TGG | + | chr8_3:25738027-25738046 | Msa1283910:CDS | 45.0% | |
| CAACACCATTTAGATCACCG+AGG | - | chr8_3:25738035-25738054 | None:intergenic | 45.0% | |
| GTTGAGAAGTTGAAGGCTGT+AGG | + | chr8_3:25738051-25738070 | Msa1283910:CDS | 45.0% | |
| ! | ATGCAATCACGAAAGTGCAC+TGG | + | chr8_3:25738109-25738128 | Msa1283910:CDS | 45.0% |
| ! | AATCACGAAAGTGCACTGGA+AGG | + | chr8_3:25738113-25738132 | Msa1283910:CDS | 45.0% |
| TCTCCATCACCACTGAAACA+GGG | - | chr8_3:25738141-25738160 | None:intergenic | 45.0% | |
| !! | TTTCAGTGGTGATGGAGAGT+GGG | + | chr8_3:25738143-25738162 | Msa1283910:CDS | 45.0% |
| GAAAATCCTTGAAGGGCCTA+AGG | + | chr8_3:25738233-25738252 | Msa1283910:CDS | 45.0% | |
| GACACAACAATTGGACGTAC+AGG | - | chr8_3:25738285-25738304 | None:intergenic | 45.0% | |
| TGACATTGTGACAGTCGAGA+AGG | + | chr8_3:25738571-25738590 | Msa1283910:CDS | 45.0% | |
| TGTTCAGGAACATCGGGAAT+GGG | - | chr8_3:25738656-25738675 | None:intergenic | 45.0% | |
| TCTTCCTGTTCAGGAACATC+GGG | - | chr8_3:25738662-25738681 | None:intergenic | 45.0% | |
| ATTGGGGACAGCAATAACTC+TGG | + | chr8_3:25738707-25738726 | Msa1283910:CDS | 45.0% | |
| GCTACCACTTCTTCCGAAAA+TGG | - | chr8_3:25738737-25738756 | None:intergenic | 45.0% | |
| TCGGAAGAAGTGGTAGCAAA+TGG | + | chr8_3:25738740-25738759 | Msa1283910:CDS | 45.0% | |
| ! | GAAACCATCAGAGAAGGTGT+TGG | + | chr8_3:25739061-25739080 | Msa1283910:CDS | 45.0% |
| AACTCCAACACCTTCTCTGA+TGG | - | chr8_3:25739068-25739087 | None:intergenic | 45.0% | |
| TCTGCTGTCATTCATCAGAC+AGG | - | chr8_3:25739199-25739218 | None:intergenic | 45.0% | |
| CTCCCATCACCAGTATTTGT+TGG | + | chr8_3:25737449-25737468 | Msa1283910:CDS | 45.0% | |
| TGACAAGTCGTTATCCCTGT+GGG | + | chr8_3:25737507-25737526 | Msa1283910:CDS | 45.0% | |
| GGGATGTCTTGAGTGGTAAA+AGG | + | chr8_3:25737527-25737546 | Msa1283910:CDS | 45.0% | |
| ATGAAGACGAGCTAGCAAAG+GGG | - | chr8_3:25737578-25737597 | None:intergenic | 45.0% | |
| GATGAAGACGAGCTAGCAAA+GGG | - | chr8_3:25737579-25737598 | None:intergenic | 45.0% | |
| TTTGCTAGCTCGTCTTCATC+CGG | + | chr8_3:25737579-25737598 | Msa1283910:CDS | 45.0% | |
| ! | CAAGCAGAGAGATGATTTGG+AGG | - | chr8_3:25737608-25737627 | None:intergenic | 45.0% |
| CTCCAAATCATCTCTCTGCT+TGG | + | chr8_3:25737606-25737625 | Msa1283910:CDS | 45.0% | |
| TGCCAAGCAGAGAGATGATT+TGG | - | chr8_3:25737611-25737630 | None:intergenic | 45.0% | |
| ATCATTGGAGCACATGAGAG+AGG | - | chr8_3:25737637-25737656 | None:intergenic | 45.0% | |
| TCTGTCTCTGACAAACCAAG+TGG | + | chr8_3:25737697-25737716 | Msa1283910:CDS | 45.0% | |
| TCGAGTTTCCCACATAAACC+AGG | - | chr8_3:25737807-25737826 | None:intergenic | 45.0% | |
| GCTGAATTGAACGAGAACCT+CGG | + | chr8_3:25738015-25738034 | Msa1283910:CDS | 45.0% | |
| GAGAACCTCGGTGATCTAAA+TGG | + | chr8_3:25738027-25738046 | Msa1283910:CDS | 45.0% | |
| CAACACCATTTAGATCACCG+AGG | - | chr8_3:25738035-25738054 | None:intergenic | 45.0% | |
| GTTGAGAAGTTGAAGGCTGT+AGG | + | chr8_3:25738051-25738070 | Msa1283910:CDS | 45.0% | |
| ! | ATGCAATCACGAAAGTGCAC+TGG | + | chr8_3:25738109-25738128 | Msa1283910:CDS | 45.0% |
| ! | AATCACGAAAGTGCACTGGA+AGG | + | chr8_3:25738113-25738132 | Msa1283910:CDS | 45.0% |
| TCTCCATCACCACTGAAACA+GGG | - | chr8_3:25738141-25738160 | None:intergenic | 45.0% | |
| !! | TTTCAGTGGTGATGGAGAGT+GGG | + | chr8_3:25738143-25738162 | Msa1283910:CDS | 45.0% |
| GAAAATCCTTGAAGGGCCTA+AGG | + | chr8_3:25738233-25738252 | Msa1283910:CDS | 45.0% | |
| GACACAACAATTGGACGTAC+AGG | - | chr8_3:25738285-25738304 | None:intergenic | 45.0% | |
| TGACATTGTGACAGTCGAGA+AGG | + | chr8_3:25738571-25738590 | Msa1283910:CDS | 45.0% | |
| TGTTCAGGAACATCGGGAAT+GGG | - | chr8_3:25738656-25738675 | None:intergenic | 45.0% | |
| TCTTCCTGTTCAGGAACATC+GGG | - | chr8_3:25738662-25738681 | None:intergenic | 45.0% | |
| ATTGGGGACAGCAATAACTC+TGG | + | chr8_3:25738707-25738726 | Msa1283910:CDS | 45.0% | |
| GCTACCACTTCTTCCGAAAA+TGG | - | chr8_3:25738737-25738756 | None:intergenic | 45.0% | |
| TCGGAAGAAGTGGTAGCAAA+TGG | + | chr8_3:25738740-25738759 | Msa1283910:CDS | 45.0% | |
| ! | GAAACCATCAGAGAAGGTGT+TGG | + | chr8_3:25739061-25739080 | Msa1283910:CDS | 45.0% |
| AACTCCAACACCTTCTCTGA+TGG | - | chr8_3:25739068-25739087 | None:intergenic | 45.0% | |
| TCTGCTGTCATTCATCAGAC+AGG | - | chr8_3:25739199-25739218 | None:intergenic | 45.0% | |
| CTGACAAGTCGTTATCCCTG+TGG | + | chr8_3:25737506-25737525 | Msa1283910:CDS | 50.0% | |
| ACCACTCAAGACATCCCACA+GGG | - | chr8_3:25737524-25737543 | None:intergenic | 50.0% | |
| TACCACTCAAGACATCCCAC+AGG | - | chr8_3:25737525-25737544 | None:intergenic | 50.0% | |
| GGATGAAGACGAGCTAGCAA+AGG | - | chr8_3:25737580-25737599 | None:intergenic | 50.0% | |
| TTGCTAGCTCGTCTTCATCC+GGG | + | chr8_3:25737580-25737599 | Msa1283910:CDS | 50.0% | |
| ! | AGAGATGATTTGGAGGACCC+CGG | - | chr8_3:25737601-25737620 | None:intergenic | 50.0% |
| TTGTTGCGTGAGACAGGGTT+TGG | - | chr8_3:25737724-25737743 | None:intergenic | 50.0% | |
| AAACCCTGTCTCACGCAACA+AGG | + | chr8_3:25737723-25737742 | Msa1283910:CDS | 50.0% | |
| AACCCTGTCTCACGCAACAA+GGG | + | chr8_3:25737724-25737743 | Msa1283910:CDS | 50.0% | |
| AACCCTTGTTGCGTGAGACA+GGG | - | chr8_3:25737729-25737748 | None:intergenic | 50.0% | |
| ! | TCACGCAACAAGGGTTCTGA+TGG | + | chr8_3:25737733-25737752 | Msa1283910:CDS | 50.0% |
| ACATGCAGCAGTAGGTGTGA+AGG | - | chr8_3:25737767-25737786 | None:intergenic | 50.0% | |
| AGTAAAGATGGTGAGGTGCG+TGG | + | chr8_3:25737850-25737869 | Msa1283910:intron | 50.0% | |
| CGTGGCATGGTTTCTATCTC+TGG | + | chr8_3:25737868-25737887 | Msa1283910:CDS | 50.0% | |
| GGCATGGTTTCTATCTCTGG+TGG | + | chr8_3:25737871-25737890 | Msa1283910:CDS | 50.0% | |
| CTCTCCATCACCACTGAAAC+AGG | - | chr8_3:25738142-25738161 | None:intergenic | 50.0% | |
| !! | GTTTCAGTGGTGATGGAGAG+TGG | + | chr8_3:25738142-25738161 | Msa1283910:CDS | 50.0% |
| !! | GTTGGTGGTTCTGCTAGCAA+AGG | + | chr8_3:25738168-25738187 | Msa1283910:CDS | 50.0% |
| CTGTTCAGGAACATCGGGAA+TGG | - | chr8_3:25738657-25738676 | None:intergenic | 50.0% | |
| CATTCCCGATGTTCCTGAAC+AGG | + | chr8_3:25738655-25738674 | Msa1283910:CDS | 50.0% | |
| ! | CTTCAAGTGGACTTGAGGCA+TGG | - | chr8_3:25738778-25738797 | None:intergenic | 50.0% |
| CATGCCTCAAGTCCACTTGA+AGG | + | chr8_3:25738776-25738795 | Msa1283910:CDS | 50.0% | |
| GGCGTGACATTACCTTCAAG+TGG | - | chr8_3:25738791-25738810 | None:intergenic | 50.0% | |
| AAGGCGGAAACCATCAGAGA+AGG | + | chr8_3:25739055-25739074 | Msa1283910:CDS | 50.0% | |
| !! | AGAGAAGGTGTTGGAGTTGC+AGG | + | chr8_3:25739070-25739089 | Msa1283910:CDS | 50.0% |
| CTGACAAGTCGTTATCCCTG+TGG | + | chr8_3:25737506-25737525 | Msa1283910:CDS | 50.0% | |
| ACCACTCAAGACATCCCACA+GGG | - | chr8_3:25737524-25737543 | None:intergenic | 50.0% | |
| TACCACTCAAGACATCCCAC+AGG | - | chr8_3:25737525-25737544 | None:intergenic | 50.0% | |
| GGATGAAGACGAGCTAGCAA+AGG | - | chr8_3:25737580-25737599 | None:intergenic | 50.0% | |
| TTGCTAGCTCGTCTTCATCC+GGG | + | chr8_3:25737580-25737599 | Msa1283910:CDS | 50.0% | |
| ! | AGAGATGATTTGGAGGACCC+CGG | - | chr8_3:25737601-25737620 | None:intergenic | 50.0% |
| TTGTTGCGTGAGACAGGGTT+TGG | - | chr8_3:25737724-25737743 | None:intergenic | 50.0% | |
| AAACCCTGTCTCACGCAACA+AGG | + | chr8_3:25737723-25737742 | Msa1283910:CDS | 50.0% | |
| AACCCTGTCTCACGCAACAA+GGG | + | chr8_3:25737724-25737743 | Msa1283910:CDS | 50.0% | |
| AACCCTTGTTGCGTGAGACA+GGG | - | chr8_3:25737729-25737748 | None:intergenic | 50.0% | |
| ! | TCACGCAACAAGGGTTCTGA+TGG | + | chr8_3:25737733-25737752 | Msa1283910:CDS | 50.0% |
| ACATGCAGCAGTAGGTGTGA+AGG | - | chr8_3:25737767-25737786 | None:intergenic | 50.0% | |
| AGTAAAGATGGTGAGGTGCG+TGG | + | chr8_3:25737850-25737869 | Msa1283910:intron | 50.0% | |
| CGTGGCATGGTTTCTATCTC+TGG | + | chr8_3:25737868-25737887 | Msa1283910:CDS | 50.0% | |
| GGCATGGTTTCTATCTCTGG+TGG | + | chr8_3:25737871-25737890 | Msa1283910:CDS | 50.0% | |
| CTCTCCATCACCACTGAAAC+AGG | - | chr8_3:25738142-25738161 | None:intergenic | 50.0% | |
| !! | GTTTCAGTGGTGATGGAGAG+TGG | + | chr8_3:25738142-25738161 | Msa1283910:CDS | 50.0% |
| !! | GTTGGTGGTTCTGCTAGCAA+AGG | + | chr8_3:25738168-25738187 | Msa1283910:CDS | 50.0% |
| CTGTTCAGGAACATCGGGAA+TGG | - | chr8_3:25738657-25738676 | None:intergenic | 50.0% | |
| CATTCCCGATGTTCCTGAAC+AGG | + | chr8_3:25738655-25738674 | Msa1283910:CDS | 50.0% | |
| ! | CTTCAAGTGGACTTGAGGCA+TGG | - | chr8_3:25738778-25738797 | None:intergenic | 50.0% |
| CATGCCTCAAGTCCACTTGA+AGG | + | chr8_3:25738776-25738795 | Msa1283910:CDS | 50.0% | |
| GGCGTGACATTACCTTCAAG+TGG | - | chr8_3:25738791-25738810 | None:intergenic | 50.0% | |
| AAGGCGGAAACCATCAGAGA+AGG | + | chr8_3:25739055-25739074 | Msa1283910:CDS | 50.0% | |
| !! | AGAGAAGGTGTTGGAGTTGC+AGG | + | chr8_3:25739070-25739089 | Msa1283910:CDS | 50.0% |
| TCCCTGTGGGATGTCTTGAG+TGG | + | chr8_3:25737520-25737539 | Msa1283910:CDS | 55.0% | |
| TGCTAGCTCGTCTTCATCCG+GGG | + | chr8_3:25737581-25737600 | Msa1283910:CDS | 55.0% | |
| ! | GAGACAGGGTTTGGTCCACT+TGG | - | chr8_3:25737715-25737734 | None:intergenic | 55.0% |
| GAACCCTTGTTGCGTGAGAC+AGG | - | chr8_3:25737730-25737749 | None:intergenic | 55.0% | |
| TGCAGCAGTAGGTGTGAAGG+AGG | - | chr8_3:25737764-25737783 | None:intergenic | 55.0% | |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | + | chr8_3:25738129-25738148 | Msa1283910:CDS | 55.0% |
| GCACCCTGTTTCAGTGGTGA+TGG | + | chr8_3:25738135-25738154 | Msa1283910:CDS | 55.0% | |
| !! | GGTGATGGAGAGTGGGTTGT+TGG | + | chr8_3:25738150-25738169 | Msa1283910:CDS | 55.0% |
| !! | GATGGAGAGTGGGTTGTTGG+TGG | + | chr8_3:25738153-25738172 | Msa1283910:CDS | 55.0% |
| CAGCGACTCTGATATGTCCG+AGG | + | chr8_3:25738604-25738623 | Msa1283910:CDS | 55.0% | |
| ACATCGGGAATGGGAGACAC+TGG | - | chr8_3:25738647-25738666 | None:intergenic | 55.0% | |
| TCCCTGTGGGATGTCTTGAG+TGG | + | chr8_3:25737520-25737539 | Msa1283910:CDS | 55.0% | |
| TGCTAGCTCGTCTTCATCCG+GGG | + | chr8_3:25737581-25737600 | Msa1283910:CDS | 55.0% | |
| ! | GAGACAGGGTTTGGTCCACT+TGG | - | chr8_3:25737715-25737734 | None:intergenic | 55.0% |
| GAACCCTTGTTGCGTGAGAC+AGG | - | chr8_3:25737730-25737749 | None:intergenic | 55.0% | |
| TGCAGCAGTAGGTGTGAAGG+AGG | - | chr8_3:25737764-25737783 | None:intergenic | 55.0% | |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | + | chr8_3:25738129-25738148 | Msa1283910:CDS | 55.0% |
| GCACCCTGTTTCAGTGGTGA+TGG | + | chr8_3:25738135-25738154 | Msa1283910:CDS | 55.0% | |
| !! | GGTGATGGAGAGTGGGTTGT+TGG | + | chr8_3:25738150-25738169 | Msa1283910:CDS | 55.0% |
| !! | GATGGAGAGTGGGTTGTTGG+TGG | + | chr8_3:25738153-25738172 | Msa1283910:CDS | 55.0% |
| CAGCGACTCTGATATGTCCG+AGG | + | chr8_3:25738604-25738623 | Msa1283910:CDS | 55.0% | |
| ACATCGGGAATGGGAGACAC+TGG | - | chr8_3:25738647-25738666 | None:intergenic | 55.0% | |
| AGATGGTGAGGTGCGTGGCA+TGG | + | chr8_3:25737855-25737874 | Msa1283910:CDS | 60.0% | |
| GGGCTTCCTTAGGCCCTTCA+AGG | - | chr8_3:25738242-25738261 | None:intergenic | 60.0% | |
| AGATGGTGAGGTGCGTGGCA+TGG | + | chr8_3:25737855-25737874 | Msa1283910:CDS | 60.0% | |
| GGGCTTCCTTAGGCCCTTCA+AGG | - | chr8_3:25738242-25738261 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 25737367 | 25739472 | 25737367 | ID=Msa1283910;Name=Msa1283910 |
| chr8_3 | mRNA | 25737367 | 25739472 | 25737367 | ID=Msa1283910-mRNA-1;Parent=Msa1283910;Name=Msa1283910-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.33|0.28|1|0.33|0.28|7|261|472 |
| chr8_3 | exon | 25737367 | 25737561 | 25737367 | ID=Msa1283910-mRNA-1:exon:9034;Parent=Msa1283910-mRNA-1 |
| chr8_3 | exon | 25737571 | 25737794 | 25737571 | ID=Msa1283910-mRNA-1:exon:9035;Parent=Msa1283910-mRNA-1 |
| chr8_3 | exon | 25737852 | 25738096 | 25737852 | ID=Msa1283910-mRNA-1:exon:9036;Parent=Msa1283910-mRNA-1 |
| chr8_3 | exon | 25738109 | 25738288 | 25738109 | ID=Msa1283910-mRNA-1:exon:9037;Parent=Msa1283910-mRNA-1 |
| chr8_3 | exon | 25738325 | 25738452 | 25738325 | ID=Msa1283910-mRNA-1:exon:9038;Parent=Msa1283910-mRNA-1 |
| chr8_3 | exon | 25738536 | 25738797 | 25738536 | ID=Msa1283910-mRNA-1:exon:9039;Parent=Msa1283910-mRNA-1 |
| chr8_3 | exon | 25739027 | 25739472 | 25739027 | ID=Msa1283910-mRNA-1:exon:9040;Parent=Msa1283910-mRNA-1 |
| chr8_3 | CDS | 25737367 | 25737561 | 25737367 | ID=Msa1283910-mRNA-1:cds;Parent=Msa1283910-mRNA-1 |
| chr8_3 | CDS | 25737571 | 25737794 | 25737571 | ID=Msa1283910-mRNA-1:cds;Parent=Msa1283910-mRNA-1 |
| chr8_3 | CDS | 25737852 | 25738096 | 25737852 | ID=Msa1283910-mRNA-1:cds;Parent=Msa1283910-mRNA-1 |
| chr8_3 | CDS | 25738109 | 25738288 | 25738109 | ID=Msa1283910-mRNA-1:cds;Parent=Msa1283910-mRNA-1 |
| chr8_3 | CDS | 25738325 | 25738452 | 25738325 | ID=Msa1283910-mRNA-1:cds;Parent=Msa1283910-mRNA-1 |
| chr8_3 | CDS | 25738536 | 25738797 | 25738536 | ID=Msa1283910-mRNA-1:cds;Parent=Msa1283910-mRNA-1 |
| chr8_3 | CDS | 25739027 | 25739211 | 25739027 | ID=Msa1283910-mRNA-1:cds;Parent=Msa1283910-mRNA-1 |
| chr8_3 | three_prime_UTR | 25739212 | 25739472 | 25739212 | ID=Msa1283910-mRNA-1:three_prime_utr;Parent=Msa1283910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
