Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0909230 | XP_003628195.1 | 90.196 | 510 | 12 | 4 | 1 | 472 | 41 | 550 | 0.0 | 877 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0909230 | sp|Q5E915|RBBP_ARATH | 60.808 | 495 | 151 | 8 | 1 | 457 | 41 | 530 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0909230 | 0.804665 | 1.937140e-49 | -8.615850e-47 |
| Msa0003700 | Msa0909230 | 0.829944 | 3.877572e-55 | -8.615850e-47 |
| Msa0007480 | Msa0909230 | 0.837630 | 4.641794e-57 | -8.615850e-47 |
| Msa0016670 | Msa0909230 | 0.820930 | 5.287194e-53 | -8.615850e-47 |
| Msa0017510 | Msa0909230 | 0.827685 | 1.364824e-54 | -8.615850e-47 |
| Msa0027230 | Msa0909230 | 0.810434 | 1.155172e-50 | -8.615850e-47 |
| Msa0028420 | Msa0909230 | 0.842615 | 2.321174e-58 | -8.615850e-47 |
| Msa0032430 | Msa0909230 | 0.805038 | 1.619207e-49 | -8.615850e-47 |
| Msa0036850 | Msa0909230 | 0.804743 | 1.865923e-49 | -8.615850e-47 |
| Msa0043670 | Msa0909230 | -0.812855 | 3.436538e-51 | -8.615850e-47 |
| Msa0074320 | Msa0909230 | 0.803212 | 3.882073e-49 | -8.615850e-47 |
| Msa0075220 | Msa0909230 | 0.819402 | 1.183495e-52 | -8.615850e-47 |
| Msa0077200 | Msa0909230 | 0.815208 | 1.040189e-51 | -8.615850e-47 |
| Msa0087940 | Msa0909230 | 0.805368 | 1.380647e-49 | -8.615850e-47 |
| Msa0094120 | Msa0909230 | 0.821246 | 4.470620e-53 | -8.615850e-47 |
| Msa0094140 | Msa0909230 | 0.817533 | 3.138544e-52 | -8.615850e-47 |
| Msa0110970 | Msa0909230 | 0.838281 | 3.157519e-57 | -8.615850e-47 |
| Msa0115160 | Msa0909230 | 0.813184 | 2.910065e-51 | -8.615850e-47 |
| Msa0116340 | Msa0909230 | 0.810479 | 1.129577e-50 | -8.615850e-47 |
| Msa0118570 | Msa0909230 | 0.810714 | 1.004703e-50 | -8.615850e-47 |
| Msa0608320 | Msa0909230 | 0.805202 | 1.496153e-49 | -8.615850e-47 |
| Msa0615710 | Msa0909230 | 0.803547 | 3.309877e-49 | -8.615850e-47 |
| Msa0650020 | Msa0909230 | 0.815904 | 7.277076e-52 | -8.615850e-47 |
| Msa0650090 | Msa0909230 | 0.810284 | 1.244618e-50 | -8.615850e-47 |
| Msa0655560 | Msa0909230 | 0.806092 | 9.730657e-50 | -8.615850e-47 |
| Msa0677290 | Msa0909230 | 0.818383 | 2.016780e-52 | -8.615850e-47 |
| Msa0683570 | Msa0909230 | 0.822009 | 2.979416e-53 | -8.615850e-47 |
| Msa0691980 | Msa0909230 | 0.802754 | 4.828609e-49 | -8.615850e-47 |
| Msa0692080 | Msa0909230 | 0.811559 | 6.588055e-51 | -8.615850e-47 |
| Msa0703230 | Msa0909230 | 0.814670 | 1.368503e-51 | -8.615850e-47 |
| Msa0704600 | Msa0909230 | 0.807302 | 5.402213e-50 | -8.615850e-47 |
| Msa0708520 | Msa0909230 | 0.801864 | 7.363187e-49 | -8.615850e-47 |
| Msa0719510 | Msa0909230 | 0.801087 | 1.062455e-48 | -8.615850e-47 |
| Msa0730430 | Msa0909230 | 0.808710 | 2.709277e-50 | -8.615850e-47 |
| Msa0738040 | Msa0909230 | 0.808866 | 2.509259e-50 | -8.615850e-47 |
| Msa0749740 | Msa0909230 | 0.807550 | 4.785708e-50 | -8.615850e-47 |
| Msa0750880 | Msa0909230 | 0.805372 | 1.378352e-49 | -8.615850e-47 |
| Msa0751570 | Msa0909230 | 0.820185 | 7.839695e-53 | -8.615850e-47 |
| Msa0754520 | Msa0909230 | 0.808270 | 3.362973e-50 | -8.615850e-47 |
| Msa0766740 | Msa0909230 | 0.811344 | 7.337145e-51 | -8.615850e-47 |
| Msa0770720 | Msa0909230 | 0.803221 | 3.865333e-49 | -8.615850e-47 |
| Msa0785210 | Msa0909230 | 0.813117 | 3.010963e-51 | -8.615850e-47 |
| Msa0833220 | Msa0909230 | 0.802392 | 5.734990e-49 | -8.615850e-47 |
| Msa0122970 | Msa0909230 | 0.807819 | 4.195118e-50 | -8.615850e-47 |
| Msa0124060 | Msa0909230 | 0.815788 | 7.723757e-52 | -8.615850e-47 |
| Msa0124340 | Msa0909230 | 0.800101 | 1.687627e-48 | -8.615850e-47 |
| Msa0124990 | Msa0909230 | 0.809392 | 1.935769e-50 | -8.615850e-47 |
| Msa0134610 | Msa0909230 | 0.801383 | 9.238717e-49 | -8.615850e-47 |
| Msa0146260 | Msa0909230 | 0.825297 | 5.062574e-54 | -8.615850e-47 |
| Msa0157290 | Msa0909230 | 0.828109 | 1.078883e-54 | -8.615850e-47 |
| Msa0167520 | Msa0909230 | 0.809822 | 1.564980e-50 | -8.615850e-47 |
| Msa0168500 | Msa0909230 | 0.824531 | 7.676532e-54 | -8.615850e-47 |
| Msa0169690 | Msa0909230 | 0.816801 | 4.584298e-52 | -8.615850e-47 |
| Msa0172070 | Msa0909230 | 0.802682 | 4.996467e-49 | -8.615850e-47 |
| Msa0182320 | Msa0909230 | 0.803235 | 3.840572e-49 | -8.615850e-47 |
| Msa0186890 | Msa0909230 | 0.813832 | 2.096323e-51 | -8.615850e-47 |
| Msa0187690 | Msa0909230 | 0.801424 | 9.064456e-49 | -8.615850e-47 |
| Msa0197420 | Msa0909230 | 0.803454 | 3.459536e-49 | -8.615850e-47 |
| Msa0225740 | Msa0909230 | 0.826715 | 2.329945e-54 | -8.615850e-47 |
| Msa0225760 | Msa0909230 | 0.814420 | 1.554666e-51 | -8.615850e-47 |
| Msa0379770 | Msa0909230 | 0.807671 | 4.511008e-50 | -8.615850e-47 |
| Msa0417270 | Msa0909230 | 0.810365 | 1.195330e-50 | -8.615850e-47 |
| Msa0417880 | Msa0909230 | 0.819709 | 1.007248e-52 | -8.615850e-47 |
| Msa0422850 | Msa0909230 | 0.802800 | 4.723121e-49 | -8.615850e-47 |
| Msa0422930 | Msa0909230 | 0.802877 | 4.555037e-49 | -8.615850e-47 |
| Msa0428150 | Msa0909230 | 0.827269 | 1.717294e-54 | -8.615850e-47 |
| Msa0428590 | Msa0909230 | 0.800043 | 1.734254e-48 | -8.615850e-47 |
| Msa0462500 | Msa0909230 | 0.823328 | 1.469938e-53 | -8.615850e-47 |
| Msa0469030 | Msa0909230 | 0.803986 | 2.682109e-49 | -8.615850e-47 |
| Msa0475790 | Msa0909230 | 0.846918 | 1.606258e-59 | -8.615850e-47 |
| Msa0239190 | Msa0909230 | 0.826719 | 2.324630e-54 | -8.615850e-47 |
| Msa0255090 | Msa0909230 | 0.837549 | 4.869452e-57 | -8.615850e-47 |
| Msa0259380 | Msa0909230 | 0.834480 | 2.925801e-56 | -8.615850e-47 |
| Msa0260610 | Msa0909230 | 0.805748 | 1.149221e-49 | -8.615850e-47 |
| Msa0260670 | Msa0909230 | 0.807538 | 4.814345e-50 | -8.615850e-47 |
| Msa0264040 | Msa0909230 | 0.801256 | 9.812640e-49 | -8.615850e-47 |
| Msa0264870 | Msa0909230 | 0.802838 | 4.639158e-49 | -8.615850e-47 |
| Msa0268130 | Msa0909230 | 0.802097 | 6.595062e-49 | -8.615850e-47 |
| Msa0277180 | Msa0909230 | 0.819469 | 1.142553e-52 | -8.615850e-47 |
| Msa0280610 | Msa0909230 | 0.804356 | 2.247014e-49 | -8.615850e-47 |
| Msa0292400 | Msa0909230 | 0.841947 | 3.487112e-58 | -8.615850e-47 |
| Msa0294160 | Msa0909230 | 0.816520 | 5.299733e-52 | -8.615850e-47 |
| Msa0316810 | Msa0909230 | 0.826479 | 2.652875e-54 | -8.615850e-47 |
| Msa0337540 | Msa0909230 | 0.801054 | 1.078862e-48 | -8.615850e-47 |
| Msa0349710 | Msa0909230 | 0.832437 | 9.456048e-56 | -8.615850e-47 |
| Msa0532070 | Msa0909230 | 0.834231 | 3.378123e-56 | -8.615850e-47 |
| Msa0541860 | Msa0909230 | 0.814565 | 1.443882e-51 | -8.615850e-47 |
| Msa0546680 | Msa0909230 | 0.806705 | 7.223918e-50 | -8.615850e-47 |
| Msa0562220 | Msa0909230 | 0.804652 | 1.948779e-49 | -8.615850e-47 |
| Msa0569200 | Msa0909230 | 0.815983 | 6.989777e-52 | -8.615850e-47 |
| Msa0574890 | Msa0909230 | 0.800886 | 1.167644e-48 | -8.615850e-47 |
| Msa0576690 | Msa0909230 | 0.810691 | 1.016300e-50 | -8.615850e-47 |
| Msa0861870 | Msa0909230 | 0.801080 | 1.065723e-48 | -8.615850e-47 |
| Msa0869780 | Msa0909230 | 0.812598 | 3.910669e-51 | -8.615850e-47 |
| Msa0878290 | Msa0909230 | 0.800584 | 1.345465e-48 | -8.615850e-47 |
| Msa0880140 | Msa0909230 | 0.822532 | 2.252479e-53 | -8.615850e-47 |
| Msa0896540 | Msa0909230 | 0.802503 | 5.440880e-49 | -8.615850e-47 |
| Msa0909230 | Msa0945110 | 0.838509 | 2.757262e-57 | -8.615850e-47 |
| Msa0909230 | Msa0968590 | 0.815485 | 9.026082e-52 | -8.615850e-47 |
| Msa0909230 | Msa1004550 | 0.848014 | 8.026096e-60 | -8.615850e-47 |
| Msa0909230 | Msa1004600 | 0.848848 | 4.718524e-60 | -8.615850e-47 |
| Msa0909230 | Msa1013400 | 0.805383 | 1.370822e-49 | -8.615850e-47 |
| Msa0909230 | Msa1034780 | 0.818351 | 2.050846e-52 | -8.615850e-47 |
| Msa0909230 | Msa1045140 | 0.803620 | 3.196128e-49 | -8.615850e-47 |
| Msa0909230 | Msa1051830 | 0.800727 | 1.258425e-48 | -8.615850e-47 |
| Msa0909230 | Msa1066490 | 0.804144 | 2.486700e-49 | -8.615850e-47 |
| Msa0909230 | Msa1074810 | 0.835228 | 1.895498e-56 | -8.615850e-47 |
| Msa0909230 | Msa1091520 | 0.821567 | 3.770161e-53 | -8.615850e-47 |
| Msa0909230 | Msa1097640 | 0.805364 | 1.383434e-49 | -8.615850e-47 |
| Msa0909230 | Msa1106700 | 0.817665 | 2.931359e-52 | -8.615850e-47 |
| Msa0909230 | Msa1108160 | 0.808748 | 2.659625e-50 | -8.615850e-47 |
| Msa0909230 | Msa1113340 | 0.803224 | 3.860218e-49 | -8.615850e-47 |
| Msa0909230 | Msa1124110 | 0.834945 | 2.235178e-56 | -8.615850e-47 |
| Msa0909230 | Msa1126510 | 0.809965 | 1.457958e-50 | -8.615850e-47 |
| Msa0909230 | Msa1127890 | 0.804353 | 2.250282e-49 | -8.615850e-47 |
| Msa0909230 | Msa1128710 | 0.801668 | 8.078875e-49 | -8.615850e-47 |
| Msa0909230 | Msa1139810 | 0.812205 | 4.767108e-51 | -8.615850e-47 |
| Msa0909230 | Msa1147900 | 0.814150 | 1.783459e-51 | -8.615850e-47 |
| Msa0909230 | Msa1162150 | 0.805158 | 1.527820e-49 | -8.615850e-47 |
| Msa0909230 | Msa1165020 | 0.800295 | 1.541221e-48 | -8.615850e-47 |
| Msa0909230 | Msa1168950 | 0.817931 | 2.552120e-52 | -8.615850e-47 |
| Msa0909230 | Msa1169040 | 0.800210 | 1.604043e-48 | -8.615850e-47 |
| Msa0909230 | Msa1189070 | 0.810964 | 8.872108e-51 | -8.615850e-47 |
| Msa0909230 | Msa1201650 | 0.823134 | 1.631258e-53 | -8.615850e-47 |
| Msa0909230 | Msa1209460 | 0.829062 | 6.351829e-55 | -8.615850e-47 |
| Msa0909230 | Msa1218600 | 0.802953 | 4.391549e-49 | -8.615850e-47 |
| Msa0909230 | Msa1225700 | 0.817017 | 4.099989e-52 | -8.615850e-47 |
| Msa0909230 | Msa1242180 | 0.875083 | 4.075543e-68 | -8.615850e-47 |
| Msa0909230 | Msa1252190 | 0.840566 | 8.048363e-58 | -8.615850e-47 |
| Msa0909230 | Msa1254610 | 0.816574 | 5.156460e-52 | -8.615850e-47 |
| Msa0909230 | Msa1256340 | 0.803560 | 3.289430e-49 | -8.615850e-47 |
| Msa0909230 | Msa1261010 | 0.805842 | 1.098093e-49 | -8.615850e-47 |
| Msa0909230 | Msa1268670 | 0.806853 | 6.721679e-50 | -8.615850e-47 |
| Msa0909230 | Msa1271990 | 0.802234 | 6.179829e-49 | -8.615850e-47 |
| Msa0909230 | Msa1272900 | 0.822625 | 2.142695e-53 | -8.615850e-47 |
| Msa0909230 | Msa1283910 | 0.949591 | 9.326943e-108 | -8.615850e-47 |
| Msa0909230 | Msa1292830 | 0.850292 | 1.866466e-60 | -8.615850e-47 |
| Msa0909230 | Msa1322940 | 0.886177 | 4.290228e-72 | -8.615850e-47 |
| Msa0909230 | Msa1336120 | 0.807513 | 4.873395e-50 | -8.615850e-47 |
| Msa0909230 | Msa1346370 | 0.802108 | 6.559745e-49 | -8.615850e-47 |
| Msa0909230 | Msa1353060 | 0.807214 | 5.639657e-50 | -8.615850e-47 |
| Msa0909230 | Msa1374040 | 0.823577 | 1.285266e-53 | -8.615850e-47 |
| Msa0909230 | Msa1374550 | 0.823917 | 1.069888e-53 | -8.615850e-47 |
| Msa0909230 | Msa1391770 | 0.812946 | 3.281819e-51 | -8.615850e-47 |
| Msa0909230 | Msa1417420 | 0.826056 | 3.345243e-54 | -8.615850e-47 |
| Msa0909230 | Msa1432950 | 0.805740 | 1.153798e-49 | -8.615850e-47 |
| Msa0909230 | Msa1440260 | -0.809430 | 1.899963e-50 | -8.615850e-47 |
| Msa0909230 | Msa1445500 | 0.935035 | 1.596215e-96 | -8.615850e-47 |
| Msa0909230 | Msa1446810 | 0.819659 | 1.034253e-52 | -8.615850e-47 |
| Msa0909230 | Msa1459380 | 0.825998 | 3.451464e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0909230 | MtrunA17_Chr8g0355681 | 90.196 | 510 | 12 | 4 | 1 | 472 | 41 | 550 | 0.0 | 904 |
| Msa0909230 | MtrunA17_Chr8g0354361 | 84.510 | 510 | 40 | 5 | 1 | 472 | 41 | 549 | 0.0 | 819 |
| Msa0909230 | MtrunA17_Chr8g0355701 | 81.250 | 512 | 46 | 7 | 1 | 472 | 15 | 516 | 0.0 | 775 |
| Msa0909230 | MtrunA17_Chr5g0429441 | 71.250 | 80 | 20 | 1 | 1 | 77 | 6 | 85 | 7.55e-31 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0909230 | AT3G21060.1 | 60.808 | 495 | 151 | 8 | 1 | 457 | 41 | 530 | 0.0 | 546 |
Find 124 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATATTCTTGCAGGTAAA+AGG | 0.206786 | 6_2:+10393443 | Msa0909230:intron |
| ATGATGGAAGCTGTGTTATT+TGG | 0.213605 | 6_2:+10392296 | Msa0909230:CDS |
| GCTACCACTTCTTCCGAAAA+TGG | 0.216044 | 6_2:-10393656 | None:intergenic |
| TGTGTGGCATAGTTTATATC+TGG | 0.225456 | 6_2:+10393235 | Msa0909230:intron |
| CAACCCAACATCTGAGAATA+TGG | 0.266985 | 6_2:+10394311 | Msa0909230:three_prime_UTR |
| CTCTCCATCACCACTGAAAC+AGG | 0.282312 | 6_2:-10393061 | None:intergenic |
| AAATCAATCATATTTATATA+TGG | 0.293497 | 6_2:-10394246 | None:intergenic |
| TCCTCAATCTCTTTGAAATC+AGG | 0.297441 | 6_2:-10393294 | None:intergenic |
| AATGCTCTAACTTCATCTTT+TGG | 0.301792 | 6_2:-10392913 | None:intergenic |
| CCAGTTCTCTATGTACTCTT+TGG | 0.307118 | 6_2:-10393259 | None:intergenic |
| AGAGAAGGTGTTGGAGTTGC+AGG | 0.309684 | 6_2:+10393992 | Msa0909230:CDS |
| ATATCAGAGTCGCTGAAATT+AGG | 0.326868 | 6_2:-10393518 | None:intergenic |
| TGCCAAGCAGAGAGATGATT+TGG | 0.342619 | 6_2:-10392530 | None:intergenic |
| TGATGGTTTGCTAGAGTTTG+AGG | 0.344638 | 6_2:-10394033 | None:intergenic |
| TAGATAGTTCTTCGAAGATT+GGG | 0.351030 | 6_2:+10393612 | Msa0909230:CDS |
| GATGCCACGCTAAATCAATA+AGG | 0.351990 | 6_2:-10393182 | None:intergenic |
| ATCAACAAAAGATTTAGTTT+TGG | 0.356149 | 6_2:-10394060 | None:intergenic |
| AAAAGCCTATCTTCCTGTTC+AGG | 0.357336 | 6_2:-10393590 | None:intergenic |
| ATATATAAATATGATTGATT+TGG | 0.359387 | 6_2:+10394248 | Msa0909230:three_prime_UTR |
| GGTGATGGAGAGTGGGTTGT+TGG | 0.362512 | 6_2:+10393072 | Msa0909230:CDS |
| CTCCCATCACCAGTATTTGT+TGG | 0.370774 | 6_2:+10392371 | Msa0909230:CDS |
| CGTGGCATGGTTTCTATCTC+TGG | 0.372952 | 6_2:+10392790 | Msa0909230:CDS |
| TTAGATAGTTCTTCGAAGAT+TGG | 0.374218 | 6_2:+10393611 | Msa0909230:CDS |
| TGATGGAAGCTGTGTTATTT+GGG | 0.380302 | 6_2:+10392297 | Msa0909230:CDS |
| GAGAACCTCGGTGATCTAAA+TGG | 0.383675 | 6_2:+10392949 | Msa0909230:CDS |
| TTTGCTAGCTCGTCTTCATC+CGG | 0.385250 | 6_2:+10392501 | Msa0909230:CDS |
| GAACCCTTGTTGCGTGAGAC+AGG | 0.398687 | 6_2:-10392649 | None:intergenic |
| ACACTTTGACCAACAAATAC+TGG | 0.409133 | 6_2:-10392380 | None:intergenic |
| CATTCCCGATGTTCCTGAAC+AGG | 0.418512 | 6_2:+10393577 | Msa0909230:CDS |
| GTTCCATATTCTCAGATGTT+GGG | 0.418763 | 6_2:-10394314 | None:intergenic |
| GGGCTTCCTTAGGCCCTTCA+AGG | 0.426153 | 6_2:-10393161 | None:intergenic |
| TTGCTAGCTCGTCTTCATCC+GGG | 0.427639 | 6_2:+10392502 | Msa0909230:CDS |
| CAAAGAGATTGAGGAAAATG+AGG | 0.433376 | 6_2:+10393302 | Msa0909230:CDS |
| CTTGTAATTGACAGTAAAGA+TGG | 0.434768 | 6_2:+10392760 | Msa0909230:intron |
| TTGTTGCGTGAGACAGGGTT+TGG | 0.440027 | 6_2:-10392643 | None:intergenic |
| TGAGGAAAATGAGGAGTATG+TGG | 0.443627 | 6_2:+10393311 | Msa0909230:CDS |
| TCCTGATTTCAAAGAGATTG+AGG | 0.446776 | 6_2:+10393293 | Msa0909230:CDS |
| GTGTGGCATAGTTTATATCT+GGG | 0.447441 | 6_2:+10393236 | Msa0909230:intron |
| GTGTTCAAGTCAACAATCAT+TGG | 0.449074 | 6_2:-10392571 | None:intergenic |
| GGGATGTCTTGAGTGGTAAA+AGG | 0.450323 | 6_2:+10392449 | Msa0909230:CDS |
| CTCCAAATCATCTCTCTGCT+TGG | 0.452595 | 6_2:+10392528 | Msa0909230:CDS |
| CTGTTCAGGAACATCGGGAA+TGG | 0.462989 | 6_2:-10393576 | None:intergenic |
| GATGGAGAGTGGGTTGTTGG+TGG | 0.468537 | 6_2:+10393075 | Msa0909230:CDS |
| CATGCCTCAAGTCCACTTGA+AGG | 0.471872 | 6_2:+10393698 | Msa0909230:CDS |
| TCACATACATTATCAGTGTC+AGG | 0.473182 | 6_2:-10393360 | None:intergenic |
| ATGTTCCTGAACAGGAAGAT+AGG | 0.475940 | 6_2:+10393585 | Msa0909230:CDS |
| GAGAGCACAAGATTTACATA+TGG | 0.478073 | 6_2:+10393112 | Msa0909230:CDS |
| TCGGAAGAAGTGGTAGCAAA+TGG | 0.478453 | 6_2:+10393662 | Msa0909230:CDS |
| GAATCAGCTGGCTGCAATGA+TGG | 0.479058 | 6_2:+10392280 | None:intergenic |
| TGTTCCATATTCTCAGATGT+TGG | 0.481603 | 6_2:-10394315 | None:intergenic |
| CATCTTGTGAAAATCCTTGA+AGG | 0.482006 | 6_2:+10393147 | Msa0909230:CDS |
| CCAAAGAGTACATAGAGAAC+TGG | 0.483830 | 6_2:+10393259 | Msa0909230:CDS |
| TCTTCCTGTTCAGGAACATC+GGG | 0.496645 | 6_2:-10393581 | None:intergenic |
| TGTTCAGGAACATCGGGAAT+GGG | 0.501740 | 6_2:-10393575 | None:intergenic |
| TGACCAACAAATACTGGTGA+TGG | 0.505055 | 6_2:-10392374 | None:intergenic |
| TGAAGAACATTGTATTCAGC+AGG | 0.511366 | 6_2:+10392824 | Msa0909230:CDS |
| ATGCCACGCTAAATCAATAA+GGG | 0.511908 | 6_2:-10393181 | None:intergenic |
| AACATTGTATTCAGCAGGAA+TGG | 0.517859 | 6_2:+10392829 | Msa0909230:CDS |
| GAGACAGGGTTTGGTCCACT+TGG | 0.523067 | 6_2:-10392634 | None:intergenic |
| TCACGCAACAAGGGTTCTGA+TGG | 0.523362 | 6_2:+10392655 | Msa0909230:CDS |
| AAATCAATAAGGGCTTCCTT+AGG | 0.523475 | 6_2:-10393171 | None:intergenic |
| GCACCCTGTTTCAGTGGTGA+TGG | 0.531362 | 6_2:+10393057 | Msa0909230:CDS |
| AACTCCAACACCTTCTCTGA+TGG | 0.531649 | 6_2:-10393987 | None:intergenic |
| GATGAAGACGAGCTAGCAAA+GGG | 0.534466 | 6_2:-10392498 | None:intergenic |
| GTTTCAGTGGTGATGGAGAG+TGG | 0.534496 | 6_2:+10393064 | Msa0909230:CDS |
| CAAGCAGAGAGATGATTTGG+AGG | 0.545050 | 6_2:-10392527 | None:intergenic |
| ATCTTCCTGTTCAGGAACAT+CGG | 0.551073 | 6_2:-10393582 | None:intergenic |
| ATGCAATCACGAAAGTGCAC+TGG | 0.552939 | 6_2:+10393031 | Msa0909230:CDS |
| AGAGCACAAGATTTACATAT+GGG | 0.555323 | 6_2:+10393113 | Msa0909230:CDS |
| GAAAATCCTTGAAGGGCCTA+AGG | 0.556664 | 6_2:+10393155 | Msa0909230:CDS |
| AACCCTTGTTGCGTGAGACA+GGG | 0.563354 | 6_2:-10392648 | None:intergenic |
| TGCTAGCTCGTCTTCATCCG+GGG | 0.567258 | 6_2:+10392503 | Msa0909230:CDS |
| CTTCAAGTGGACTTGAGGCA+TGG | 0.571372 | 6_2:-10393697 | None:intergenic |
| AGATAGTTCTTCGAAGATTG+GGG | 0.573049 | 6_2:+10393613 | Msa0909230:CDS |
| AAACCCTGTCTCACGCAACA+AGG | 0.574516 | 6_2:+10392645 | Msa0909230:CDS |
| ATTGGGGACAGCAATAACTC+TGG | 0.576784 | 6_2:+10393629 | Msa0909230:CDS |
| TTTCAGTGGTGATGGAGAGT+GGG | 0.579791 | 6_2:+10393065 | Msa0909230:CDS |
| TGGAAGGCACCCTGTTTCAG+TGG | 0.579970 | 6_2:+10393051 | Msa0909230:CDS |
| ATTTACATATGGGATAGAGC+TGG | 0.580981 | 6_2:+10393123 | Msa0909230:CDS |
| TCTGCTGTCATTCATCAGAC+AGG | 0.583056 | 6_2:-10394118 | None:intergenic |
| ATTACCTTCAAGTGGACTTG+AGG | 0.584311 | 6_2:-10393702 | None:intergenic |
| ATTATTTACAGATGATGCTG+TGG | 0.585458 | 6_2:+10393938 | Msa0909230:intron |
| AAATGGTGTTGAGAAGTTGA+AGG | 0.591187 | 6_2:+10392966 | Msa0909230:CDS |
| ATCTGATGTCAATGAAGATG+AGG | 0.592161 | 6_2:+10393466 | Msa0909230:CDS |
| GTTGGTGGTTCTGCTAGCAA+AGG | 0.593351 | 6_2:+10393090 | Msa0909230:CDS |
| GGCGTGACATTACCTTCAAG+TGG | 0.593844 | 6_2:-10393710 | None:intergenic |
| TGGGAACAAGAATTAAAAGA+AGG | 0.594470 | 6_2:+10393958 | Msa0909230:CDS |
| TTACTAAAACATGCAGCAGT+AGG | 0.595182 | 6_2:-10392694 | None:intergenic |
| GTTTGATTTAATATACAGCA+AGG | 0.600378 | 6_2:+10394350 | Msa0909230:three_prime_UTR |
| GACCAACAAATACTGGTGAT+GGG | 0.601286 | 6_2:-10392373 | None:intergenic |
| TAGATAACGTAGCTCTTCCT+CGG | 0.601900 | 6_2:-10393543 | None:intergenic |
| GGATGAAGACGAGCTAGCAA+AGG | 0.602138 | 6_2:-10392499 | None:intergenic |
| ATCTTGTGAAAATCCTTGAA+GGG | 0.602213 | 6_2:+10393148 | Msa0909230:CDS |
| GGCATGGTTTCTATCTCTGG+TGG | 0.603497 | 6_2:+10392793 | Msa0909230:CDS |
| ACATGCAGCAGTAGGTGTGA+AGG | 0.605285 | 6_2:-10392686 | None:intergenic |
| GAAACCATCAGAGAAGGTGT+TGG | 0.608768 | 6_2:+10393983 | Msa0909230:CDS |
| AGATGGTGAGGTGCGTGGCA+TGG | 0.609126 | 6_2:+10392777 | Msa0909230:CDS |
| TGACAAGTCGTTATCCCTGT+GGG | 0.614779 | 6_2:+10392429 | Msa0909230:CDS |
| TACCACTCAAGACATCCCAC+AGG | 0.615382 | 6_2:-10392444 | None:intergenic |
| AACCCTGTCTCACGCAACAA+GGG | 0.615851 | 6_2:+10392646 | Msa0909230:CDS |
| TCTGTTTCTGACAAACCAAG+TGG | 0.618438 | 6_2:+10392619 | Msa0909230:CDS |
| AGAGATGATTTGGAGGACCC+CGG | 0.619630 | 6_2:-10392520 | None:intergenic |
| TGACATTGTGACAGTCGAGA+AGG | 0.620507 | 6_2:+10393493 | Msa0909230:CDS |
| AAGGCGGAAACCATCAGAGA+AGG | 0.621405 | 6_2:+10393977 | Msa0909230:CDS |
| TTAATATACAGCAAGGCCAA+TGG | 0.622591 | 6_2:+10394357 | Msa0909230:three_prime_UTR |
| AGTATTTGTTGGTCAAAGTG+TGG | 0.624701 | 6_2:+10392382 | Msa0909230:CDS |
| CTGACAAGTCGTTATCCCTG+TGG | 0.627369 | 6_2:+10392428 | Msa0909230:CDS |
| ATCATTGGAGCACATGAGAG+AGG | 0.635797 | 6_2:-10392556 | None:intergenic |
| ACATCGGGAATGGGAGACAC+TGG | 0.636235 | 6_2:-10393566 | None:intergenic |
| TTATTTACAGATGATGCTGT+GGG | 0.638305 | 6_2:+10393939 | Msa0909230:intron |
| TCTCCATCACCACTGAAACA+GGG | 0.640101 | 6_2:-10393060 | None:intergenic |
| GAACAAGAATTAAAAGAAGG+CGG | 0.644668 | 6_2:+10393961 | Msa0909230:CDS |
| TCCCTGTGGGATGTCTTGAG+TGG | 0.645082 | 6_2:+10392442 | Msa0909230:CDS |
| AAGCCCTTATTGATTTAGCG+TGG | 0.655079 | 6_2:+10393178 | Msa0909230:CDS |
| TGCAGCAGTAGGTGTGAAGG+AGG | 0.657772 | 6_2:-10392683 | None:intergenic |
| ACCACTCAAGACATCCCACA+GGG | 0.671936 | 6_2:-10392443 | None:intergenic |
| CAGCGACTCTGATATGTCCG+AGG | 0.676024 | 6_2:+10393526 | Msa0909230:CDS |
| GCTGAATTGAACGAGAACCT+CGG | 0.676455 | 6_2:+10392937 | Msa0909230:CDS |
| GTTGAGAAGTTGAAGGCTGT+AGG | 0.680893 | 6_2:+10392973 | Msa0909230:CDS |
| AGTAAAGATGGTGAGGTGCG+TGG | 0.690847 | 6_2:+10392772 | Msa0909230:intron |
| AATCACGAAAGTGCACTGGA+AGG | 0.694138 | 6_2:+10393035 | Msa0909230:CDS |
| AATTGACAGTAAAGATGGTG+AGG | 0.704790 | 6_2:+10392765 | Msa0909230:intron |
| CAACACCATTTAGATCACCG+AGG | 0.738329 | 6_2:-10392954 | None:intergenic |
| ATGAAGACGAGCTAGCAAAG+GGG | 0.760208 | 6_2:-10392497 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCAATCATATTTATATA+TGG | - | chr6_2:10394249-10394268 | None:intergenic | 10.0% |
| !! | ATATATAAATATGATTGATT+TGG | + | chr6_2:10394248-10394267 | Msa0909230:three_prime_UTR | 10.0% |
| !! | AAATCAATCATATTTATATA+TGG | - | chr6_2:10394249-10394268 | None:intergenic | 10.0% |
| !! | ATATATAAATATGATTGATT+TGG | + | chr6_2:10394248-10394267 | Msa0909230:three_prime_UTR | 10.0% |
| !!! | TTCTTTTCTTTTCCATTTTA+TGG | + | chr6_2:10393409-10393428 | Msa0909230:intron | 20.0% |
| !! | AACAGTTCAATTGAAAAATA+GGG | - | chr6_2:10393779-10393798 | None:intergenic | 20.0% |
| !!! | ATCAACAAAAGATTTAGTTT+TGG | - | chr6_2:10394063-10394082 | None:intergenic | 20.0% |
| !!! | TTCTTTTCTTTTCCATTTTA+TGG | + | chr6_2:10393409-10393428 | Msa0909230:intron | 20.0% |
| !! | AACAGTTCAATTGAAAAATA+GGG | - | chr6_2:10393779-10393798 | None:intergenic | 20.0% |
| !!! | ATCAACAAAAGATTTAGTTT+TGG | - | chr6_2:10394063-10394082 | None:intergenic | 20.0% |
| ! | TAATGTATGTGAACGTTATA+TGG | + | chr6_2:10393371-10393390 | Msa0909230:intron | 25.0% |
| ! | ACTTTGTTAAGACCATAAAA+TGG | - | chr6_2:10393424-10393443 | None:intergenic | 25.0% |
| !! | TGTTACAAGCATATTTTGTA+TGG | - | chr6_2:10393734-10393753 | None:intergenic | 25.0% |
| ! | CAACAGTTCAATTGAAAAAT+AGG | - | chr6_2:10393780-10393799 | None:intergenic | 25.0% |
| ! | TCATCTGTAAATAATGTTGA+AGG | - | chr6_2:10393933-10393952 | None:intergenic | 25.0% |
| !! | GTTTGATTTAATATACAGCA+AGG | + | chr6_2:10394350-10394369 | Msa0909230:three_prime_UTR | 25.0% |
| ! | TAATGTATGTGAACGTTATA+TGG | + | chr6_2:10393371-10393390 | Msa0909230:intron | 25.0% |
| ! | ACTTTGTTAAGACCATAAAA+TGG | - | chr6_2:10393424-10393443 | None:intergenic | 25.0% |
| !! | TGTTACAAGCATATTTTGTA+TGG | - | chr6_2:10393734-10393753 | None:intergenic | 25.0% |
| ! | CAACAGTTCAATTGAAAAAT+AGG | - | chr6_2:10393780-10393799 | None:intergenic | 25.0% |
| ! | TCATCTGTAAATAATGTTGA+AGG | - | chr6_2:10393933-10393952 | None:intergenic | 25.0% |
| !! | GTTTGATTTAATATACAGCA+AGG | + | chr6_2:10394350-10394369 | Msa0909230:three_prime_UTR | 25.0% |
| !!! | TTATTTGGGATTTTGAAGTC+AGG | + | chr6_2:10392311-10392330 | Msa0909230:CDS | 30.0% |
| !!! | TATTTGGGATTTTGAAGTCA+GGG | + | chr6_2:10392312-10392331 | Msa0909230:CDS | 30.0% |
| ! | TTTTAGTAAGTATGGAAACC+TGG | + | chr6_2:10392708-10392727 | Msa0909230:intron | 30.0% |
| CTTGTAATTGACAGTAAAGA+TGG | + | chr6_2:10392760-10392779 | Msa0909230:intron | 30.0% | |
| ! | AATGCTCTAACTTCATCTTT+TGG | - | chr6_2:10392916-10392935 | None:intergenic | 30.0% |
| AGAGCACAAGATTTACATAT+GGG | + | chr6_2:10393113-10393132 | Msa0909230:CDS | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | + | chr6_2:10393148-10393167 | Msa0909230:CDS | 30.0% | |
| AAAGAAACAGACACAACAAT+TGG | - | chr6_2:10393216-10393235 | None:intergenic | 30.0% | |
| AACAAAGTTCATATTCTTGC+AGG | + | chr6_2:10393436-10393455 | Msa0909230:intron | 30.0% | |
| TTCATATTCTTGCAGGTAAA+AGG | + | chr6_2:10393443-10393462 | Msa0909230:intron | 30.0% | |
| TTAGATAGTTCTTCGAAGAT+TGG | + | chr6_2:10393611-10393630 | Msa0909230:CDS | 30.0% | |
| TAGATAGTTCTTCGAAGATT+GGG | + | chr6_2:10393612-10393631 | Msa0909230:CDS | 30.0% | |
| GAAGAAACCTAAACTCATAA+AGG | - | chr6_2:10393818-10393837 | None:intergenic | 30.0% | |
| ! | TCAAATTCTGAGAACAACAT+GGG | - | chr6_2:10393841-10393860 | None:intergenic | 30.0% |
| ! | TTCAAATTCTGAGAACAACA+TGG | - | chr6_2:10393842-10393861 | None:intergenic | 30.0% |
| ATTATTTACAGATGATGCTG+TGG | + | chr6_2:10393938-10393957 | Msa0909230:intron | 30.0% | |
| TTATTTACAGATGATGCTGT+GGG | + | chr6_2:10393939-10393958 | Msa0909230:intron | 30.0% | |
| TGGGAACAAGAATTAAAAGA+AGG | + | chr6_2:10393958-10393977 | Msa0909230:CDS | 30.0% | |
| GAACAAGAATTAAAAGAAGG+CGG | + | chr6_2:10393961-10393980 | Msa0909230:CDS | 30.0% | |
| !!! | GATTTAGTTTTGGTTCTTGA+TGG | - | chr6_2:10394053-10394072 | None:intergenic | 30.0% |
| ! | TTGCTTAGCAAATTTTCATC+AGG | + | chr6_2:10394213-10394232 | Msa0909230:three_prime_UTR | 30.0% |
| ! | TTAGCAAATTTTCATCAGGT+GGG | + | chr6_2:10394217-10394236 | Msa0909230:three_prime_UTR | 30.0% |
| !!! | TTATTTGGGATTTTGAAGTC+AGG | + | chr6_2:10392311-10392330 | Msa0909230:CDS | 30.0% |
| !!! | TATTTGGGATTTTGAAGTCA+GGG | + | chr6_2:10392312-10392331 | Msa0909230:CDS | 30.0% |
| ! | TTTTAGTAAGTATGGAAACC+TGG | + | chr6_2:10392708-10392727 | Msa0909230:intron | 30.0% |
| CTTGTAATTGACAGTAAAGA+TGG | + | chr6_2:10392760-10392779 | Msa0909230:intron | 30.0% | |
| ! | AATGCTCTAACTTCATCTTT+TGG | - | chr6_2:10392916-10392935 | None:intergenic | 30.0% |
| AGAGCACAAGATTTACATAT+GGG | + | chr6_2:10393113-10393132 | Msa0909230:CDS | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | + | chr6_2:10393148-10393167 | Msa0909230:CDS | 30.0% | |
| AAAGAAACAGACACAACAAT+TGG | - | chr6_2:10393216-10393235 | None:intergenic | 30.0% | |
| AACAAAGTTCATATTCTTGC+AGG | + | chr6_2:10393436-10393455 | Msa0909230:intron | 30.0% | |
| TTCATATTCTTGCAGGTAAA+AGG | + | chr6_2:10393443-10393462 | Msa0909230:intron | 30.0% | |
| TTAGATAGTTCTTCGAAGAT+TGG | + | chr6_2:10393611-10393630 | Msa0909230:CDS | 30.0% | |
| TAGATAGTTCTTCGAAGATT+GGG | + | chr6_2:10393612-10393631 | Msa0909230:CDS | 30.0% | |
| GAAGAAACCTAAACTCATAA+AGG | - | chr6_2:10393818-10393837 | None:intergenic | 30.0% | |
| ! | TCAAATTCTGAGAACAACAT+GGG | - | chr6_2:10393841-10393860 | None:intergenic | 30.0% |
| ! | TTCAAATTCTGAGAACAACA+TGG | - | chr6_2:10393842-10393861 | None:intergenic | 30.0% |
| ATTATTTACAGATGATGCTG+TGG | + | chr6_2:10393938-10393957 | Msa0909230:intron | 30.0% | |
| TTATTTACAGATGATGCTGT+GGG | + | chr6_2:10393939-10393958 | Msa0909230:intron | 30.0% | |
| TGGGAACAAGAATTAAAAGA+AGG | + | chr6_2:10393958-10393977 | Msa0909230:CDS | 30.0% | |
| GAACAAGAATTAAAAGAAGG+CGG | + | chr6_2:10393961-10393980 | Msa0909230:CDS | 30.0% | |
| !!! | GATTTAGTTTTGGTTCTTGA+TGG | - | chr6_2:10394053-10394072 | None:intergenic | 30.0% |
| ! | TTGCTTAGCAAATTTTCATC+AGG | + | chr6_2:10394213-10394232 | Msa0909230:three_prime_UTR | 30.0% |
| ! | TTAGCAAATTTTCATCAGGT+GGG | + | chr6_2:10394217-10394236 | Msa0909230:three_prime_UTR | 30.0% |
| ! | ATGATGGAAGCTGTGTTATT+TGG | + | chr6_2:10392296-10392315 | Msa0909230:CDS | 35.0% |
| !! | TGATGGAAGCTGTGTTATTT+GGG | + | chr6_2:10392297-10392316 | Msa0909230:CDS | 35.0% |
| !!! | ATTTGGGATTTTGAAGTCAG+GGG | + | chr6_2:10392313-10392332 | Msa0909230:CDS | 35.0% |
| ACACTTTGACCAACAAATAC+TGG | - | chr6_2:10392383-10392402 | None:intergenic | 35.0% | |
| ! | AGTATTTGTTGGTCAAAGTG+TGG | + | chr6_2:10392382-10392401 | Msa0909230:CDS | 35.0% |
| GTGTTCAAGTCAACAATCAT+TGG | - | chr6_2:10392574-10392593 | None:intergenic | 35.0% | |
| TTACTAAAACATGCAGCAGT+AGG | - | chr6_2:10392697-10392716 | None:intergenic | 35.0% | |
| !!! | GCTGCATGTTTTAGTAAGTA+TGG | + | chr6_2:10392700-10392719 | Msa0909230:intron | 35.0% |
| TATGGAAACCTGGTTTATGT+GGG | + | chr6_2:10392718-10392737 | Msa0909230:intron | 35.0% | |
| AATTGACAGTAAAGATGGTG+AGG | + | chr6_2:10392765-10392784 | Msa0909230:intron | 35.0% | |
| TGAAGAACATTGTATTCAGC+AGG | + | chr6_2:10392824-10392843 | Msa0909230:CDS | 35.0% | |
| AACATTGTATTCAGCAGGAA+TGG | + | chr6_2:10392829-10392848 | Msa0909230:CDS | 35.0% | |
| ! | AAATGGTGTTGAGAAGTTGA+AGG | + | chr6_2:10392966-10392985 | Msa0909230:CDS | 35.0% |
| TGATTGCATCTTGAAACTCA+CGG | - | chr6_2:10393020-10393039 | None:intergenic | 35.0% | |
| ! | GAGAGCACAAGATTTACATA+TGG | + | chr6_2:10393112-10393131 | Msa0909230:CDS | 35.0% |
| ATTTACATATGGGATAGAGC+TGG | + | chr6_2:10393123-10393142 | Msa0909230:CDS | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | + | chr6_2:10393147-10393166 | Msa0909230:CDS | 35.0% | |
| AAATCAATAAGGGCTTCCTT+AGG | - | chr6_2:10393174-10393193 | None:intergenic | 35.0% | |
| ATGCCACGCTAAATCAATAA+GGG | - | chr6_2:10393184-10393203 | None:intergenic | 35.0% | |
| TGTGTGGCATAGTTTATATC+TGG | + | chr6_2:10393235-10393254 | Msa0909230:intron | 35.0% | |
| GTGTGGCATAGTTTATATCT+GGG | + | chr6_2:10393236-10393255 | Msa0909230:intron | 35.0% | |
| TCCTGATTTCAAAGAGATTG+AGG | + | chr6_2:10393293-10393312 | Msa0909230:CDS | 35.0% | |
| !! | TCCTCAATCTCTTTGAAATC+AGG | - | chr6_2:10393297-10393316 | None:intergenic | 35.0% |
| CAAAGAGATTGAGGAAAATG+AGG | + | chr6_2:10393302-10393321 | Msa0909230:CDS | 35.0% | |
| TCACATACATTATCAGTGTC+AGG | - | chr6_2:10393363-10393382 | None:intergenic | 35.0% | |
| TGTGAACGTTATATGGTCAT+AGG | + | chr6_2:10393378-10393397 | Msa0909230:intron | 35.0% | |
| ATCTGATGTCAATGAAGATG+AGG | + | chr6_2:10393466-10393485 | Msa0909230:CDS | 35.0% | |
| ATATCAGAGTCGCTGAAATT+AGG | - | chr6_2:10393521-10393540 | None:intergenic | 35.0% | |
| AGATAGTTCTTCGAAGATTG+GGG | + | chr6_2:10393613-10393632 | Msa0909230:CDS | 35.0% | |
| ! | TAACTCTGGATCACCATTTT+CGG | + | chr6_2:10393643-10393662 | Msa0909230:CDS | 35.0% |
| AACTGTTGAAACACTTTGTG+AGG | + | chr6_2:10393792-10393811 | Msa0909230:intron | 35.0% | |
| ! | CAAATTCTGAGAACAACATG+GGG | - | chr6_2:10393840-10393859 | None:intergenic | 35.0% |
| !! | TCTTTTGTTGATGAGAGCAA+TGG | + | chr6_2:10394071-10394090 | Msa0909230:CDS | 35.0% |
| ! | CTTAGCAAATTTTCATCAGG+TGG | + | chr6_2:10394216-10394235 | Msa0909230:three_prime_UTR | 35.0% |
| GTTCCATATTCTCAGATGTT+GGG | - | chr6_2:10394317-10394336 | None:intergenic | 35.0% | |
| TGTTCCATATTCTCAGATGT+TGG | - | chr6_2:10394318-10394337 | None:intergenic | 35.0% | |
| TTAATATACAGCAAGGCCAA+TGG | + | chr6_2:10394357-10394376 | Msa0909230:three_prime_UTR | 35.0% | |
| ! | ATGATGGAAGCTGTGTTATT+TGG | + | chr6_2:10392296-10392315 | Msa0909230:CDS | 35.0% |
| !! | TGATGGAAGCTGTGTTATTT+GGG | + | chr6_2:10392297-10392316 | Msa0909230:CDS | 35.0% |
| !!! | ATTTGGGATTTTGAAGTCAG+GGG | + | chr6_2:10392313-10392332 | Msa0909230:CDS | 35.0% |
| ACACTTTGACCAACAAATAC+TGG | - | chr6_2:10392383-10392402 | None:intergenic | 35.0% | |
| ! | AGTATTTGTTGGTCAAAGTG+TGG | + | chr6_2:10392382-10392401 | Msa0909230:CDS | 35.0% |
| GTGTTCAAGTCAACAATCAT+TGG | - | chr6_2:10392574-10392593 | None:intergenic | 35.0% | |
| TTACTAAAACATGCAGCAGT+AGG | - | chr6_2:10392697-10392716 | None:intergenic | 35.0% | |
| !!! | GCTGCATGTTTTAGTAAGTA+TGG | + | chr6_2:10392700-10392719 | Msa0909230:intron | 35.0% |
| TATGGAAACCTGGTTTATGT+GGG | + | chr6_2:10392718-10392737 | Msa0909230:intron | 35.0% | |
| AATTGACAGTAAAGATGGTG+AGG | + | chr6_2:10392765-10392784 | Msa0909230:intron | 35.0% | |
| TGAAGAACATTGTATTCAGC+AGG | + | chr6_2:10392824-10392843 | Msa0909230:CDS | 35.0% | |
| AACATTGTATTCAGCAGGAA+TGG | + | chr6_2:10392829-10392848 | Msa0909230:CDS | 35.0% | |
| ! | AAATGGTGTTGAGAAGTTGA+AGG | + | chr6_2:10392966-10392985 | Msa0909230:CDS | 35.0% |
| TGATTGCATCTTGAAACTCA+CGG | - | chr6_2:10393020-10393039 | None:intergenic | 35.0% | |
| ! | GAGAGCACAAGATTTACATA+TGG | + | chr6_2:10393112-10393131 | Msa0909230:CDS | 35.0% |
| ATTTACATATGGGATAGAGC+TGG | + | chr6_2:10393123-10393142 | Msa0909230:CDS | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | + | chr6_2:10393147-10393166 | Msa0909230:CDS | 35.0% | |
| AAATCAATAAGGGCTTCCTT+AGG | - | chr6_2:10393174-10393193 | None:intergenic | 35.0% | |
| ATGCCACGCTAAATCAATAA+GGG | - | chr6_2:10393184-10393203 | None:intergenic | 35.0% | |
| TGTGTGGCATAGTTTATATC+TGG | + | chr6_2:10393235-10393254 | Msa0909230:intron | 35.0% | |
| GTGTGGCATAGTTTATATCT+GGG | + | chr6_2:10393236-10393255 | Msa0909230:intron | 35.0% | |
| TCCTGATTTCAAAGAGATTG+AGG | + | chr6_2:10393293-10393312 | Msa0909230:CDS | 35.0% | |
| !! | TCCTCAATCTCTTTGAAATC+AGG | - | chr6_2:10393297-10393316 | None:intergenic | 35.0% |
| CAAAGAGATTGAGGAAAATG+AGG | + | chr6_2:10393302-10393321 | Msa0909230:CDS | 35.0% | |
| TCACATACATTATCAGTGTC+AGG | - | chr6_2:10393363-10393382 | None:intergenic | 35.0% | |
| TGTGAACGTTATATGGTCAT+AGG | + | chr6_2:10393378-10393397 | Msa0909230:intron | 35.0% | |
| ATCTGATGTCAATGAAGATG+AGG | + | chr6_2:10393466-10393485 | Msa0909230:CDS | 35.0% | |
| ATATCAGAGTCGCTGAAATT+AGG | - | chr6_2:10393521-10393540 | None:intergenic | 35.0% | |
| AGATAGTTCTTCGAAGATTG+GGG | + | chr6_2:10393613-10393632 | Msa0909230:CDS | 35.0% | |
| ! | TAACTCTGGATCACCATTTT+CGG | + | chr6_2:10393643-10393662 | Msa0909230:CDS | 35.0% |
| AACTGTTGAAACACTTTGTG+AGG | + | chr6_2:10393792-10393811 | Msa0909230:intron | 35.0% | |
| ! | CAAATTCTGAGAACAACATG+GGG | - | chr6_2:10393840-10393859 | None:intergenic | 35.0% |
| !! | TCTTTTGTTGATGAGAGCAA+TGG | + | chr6_2:10394071-10394090 | Msa0909230:CDS | 35.0% |
| ! | CTTAGCAAATTTTCATCAGG+TGG | + | chr6_2:10394216-10394235 | Msa0909230:three_prime_UTR | 35.0% |
| GTTCCATATTCTCAGATGTT+GGG | - | chr6_2:10394317-10394336 | None:intergenic | 35.0% | |
| TGTTCCATATTCTCAGATGT+TGG | - | chr6_2:10394318-10394337 | None:intergenic | 35.0% | |
| TTAATATACAGCAAGGCCAA+TGG | + | chr6_2:10394357-10394376 | Msa0909230:three_prime_UTR | 35.0% | |
| GACCAACAAATACTGGTGAT+GGG | - | chr6_2:10392376-10392395 | None:intergenic | 40.0% | |
| TGACCAACAAATACTGGTGA+TGG | - | chr6_2:10392377-10392396 | None:intergenic | 40.0% | |
| !! | TCTGTTTCTGACAAACCAAG+TGG | + | chr6_2:10392619-10392638 | Msa0909230:CDS | 40.0% |
| GTATGGAAACCTGGTTTATG+TGG | + | chr6_2:10392717-10392736 | Msa0909230:intron | 40.0% | |
| GTTTATGTGGGAAACTCGAA+AGG | + | chr6_2:10392730-10392749 | Msa0909230:intron | 40.0% | |
| ! | GCTCTAACTTCATCTTTTGG+TGG | - | chr6_2:10392913-10392932 | None:intergenic | 40.0% |
| !! | AAGCCCTTATTGATTTAGCG+TGG | + | chr6_2:10393178-10393197 | Msa0909230:CDS | 40.0% |
| GATGCCACGCTAAATCAATA+AGG | - | chr6_2:10393185-10393204 | None:intergenic | 40.0% | |
| ! | GTTGTGTCTGTTTCTTTGTG+TGG | + | chr6_2:10393219-10393238 | Msa0909230:intron | 40.0% |
| CCAGTTCTCTATGTACTCTT+TGG | - | chr6_2:10393262-10393281 | None:intergenic | 40.0% | |
| ! | CCAAAGAGTACATAGAGAAC+TGG | + | chr6_2:10393259-10393278 | Msa0909230:CDS | 40.0% |
| ! | TGAGGAAAATGAGGAGTATG+TGG | + | chr6_2:10393311-10393330 | Msa0909230:CDS | 40.0% |
| TAGATAACGTAGCTCTTCCT+CGG | - | chr6_2:10393546-10393565 | None:intergenic | 40.0% | |
| ATCTTCCTGTTCAGGAACAT+CGG | - | chr6_2:10393585-10393604 | None:intergenic | 40.0% | |
| ATGTTCCTGAACAGGAAGAT+AGG | + | chr6_2:10393585-10393604 | Msa0909230:CDS | 40.0% | |
| AAAAGCCTATCTTCCTGTTC+AGG | - | chr6_2:10393593-10393612 | None:intergenic | 40.0% | |
| ! | ATCACCATTTTCGGAAGAAG+TGG | + | chr6_2:10393652-10393671 | Msa0909230:CDS | 40.0% |
| ! | ATTACCTTCAAGTGGACTTG+AGG | - | chr6_2:10393705-10393724 | None:intergenic | 40.0% |
| TGTGAGGCCTTTATGAGTTT+AGG | + | chr6_2:10393808-10393827 | Msa0909230:intron | 40.0% | |
| !! | TGATGGTTTGCTAGAGTTTG+AGG | - | chr6_2:10394036-10394055 | None:intergenic | 40.0% |
| CAACCCAACATCTGAGAATA+TGG | + | chr6_2:10394311-10394330 | Msa0909230:three_prime_UTR | 40.0% | |
| CAATGGCAAAAGTTATCCAC+AGG | + | chr6_2:10394374-10394393 | Msa0909230:three_prime_UTR | 40.0% | |
| GACCAACAAATACTGGTGAT+GGG | - | chr6_2:10392376-10392395 | None:intergenic | 40.0% | |
| TGACCAACAAATACTGGTGA+TGG | - | chr6_2:10392377-10392396 | None:intergenic | 40.0% | |
| !! | TCTGTTTCTGACAAACCAAG+TGG | + | chr6_2:10392619-10392638 | Msa0909230:CDS | 40.0% |
| GTATGGAAACCTGGTTTATG+TGG | + | chr6_2:10392717-10392736 | Msa0909230:intron | 40.0% | |
| GTTTATGTGGGAAACTCGAA+AGG | + | chr6_2:10392730-10392749 | Msa0909230:intron | 40.0% | |
| ! | GCTCTAACTTCATCTTTTGG+TGG | - | chr6_2:10392913-10392932 | None:intergenic | 40.0% |
| !! | AAGCCCTTATTGATTTAGCG+TGG | + | chr6_2:10393178-10393197 | Msa0909230:CDS | 40.0% |
| GATGCCACGCTAAATCAATA+AGG | - | chr6_2:10393185-10393204 | None:intergenic | 40.0% | |
| ! | GTTGTGTCTGTTTCTTTGTG+TGG | + | chr6_2:10393219-10393238 | Msa0909230:intron | 40.0% |
| CCAGTTCTCTATGTACTCTT+TGG | - | chr6_2:10393262-10393281 | None:intergenic | 40.0% | |
| ! | CCAAAGAGTACATAGAGAAC+TGG | + | chr6_2:10393259-10393278 | Msa0909230:CDS | 40.0% |
| ! | TGAGGAAAATGAGGAGTATG+TGG | + | chr6_2:10393311-10393330 | Msa0909230:CDS | 40.0% |
| TAGATAACGTAGCTCTTCCT+CGG | - | chr6_2:10393546-10393565 | None:intergenic | 40.0% | |
| ATCTTCCTGTTCAGGAACAT+CGG | - | chr6_2:10393585-10393604 | None:intergenic | 40.0% | |
| ATGTTCCTGAACAGGAAGAT+AGG | + | chr6_2:10393585-10393604 | Msa0909230:CDS | 40.0% | |
| AAAAGCCTATCTTCCTGTTC+AGG | - | chr6_2:10393593-10393612 | None:intergenic | 40.0% | |
| ! | ATCACCATTTTCGGAAGAAG+TGG | + | chr6_2:10393652-10393671 | Msa0909230:CDS | 40.0% |
| ! | ATTACCTTCAAGTGGACTTG+AGG | - | chr6_2:10393705-10393724 | None:intergenic | 40.0% |
| TGTGAGGCCTTTATGAGTTT+AGG | + | chr6_2:10393808-10393827 | Msa0909230:intron | 40.0% | |
| !! | TGATGGTTTGCTAGAGTTTG+AGG | - | chr6_2:10394036-10394055 | None:intergenic | 40.0% |
| CAACCCAACATCTGAGAATA+TGG | + | chr6_2:10394311-10394330 | Msa0909230:three_prime_UTR | 40.0% | |
| CTCCCATCACCAGTATTTGT+TGG | + | chr6_2:10392371-10392390 | Msa0909230:CDS | 45.0% | |
| TGACAAGTCGTTATCCCTGT+GGG | + | chr6_2:10392429-10392448 | Msa0909230:CDS | 45.0% | |
| GGGATGTCTTGAGTGGTAAA+AGG | + | chr6_2:10392449-10392468 | Msa0909230:CDS | 45.0% | |
| ATGAAGACGAGCTAGCAAAG+GGG | - | chr6_2:10392500-10392519 | None:intergenic | 45.0% | |
| GATGAAGACGAGCTAGCAAA+GGG | - | chr6_2:10392501-10392520 | None:intergenic | 45.0% | |
| TTTGCTAGCTCGTCTTCATC+CGG | + | chr6_2:10392501-10392520 | Msa0909230:CDS | 45.0% | |
| ! | CAAGCAGAGAGATGATTTGG+AGG | - | chr6_2:10392530-10392549 | None:intergenic | 45.0% |
| CTCCAAATCATCTCTCTGCT+TGG | + | chr6_2:10392528-10392547 | Msa0909230:CDS | 45.0% | |
| TGCCAAGCAGAGAGATGATT+TGG | - | chr6_2:10392533-10392552 | None:intergenic | 45.0% | |
| ATCATTGGAGCACATGAGAG+AGG | - | chr6_2:10392559-10392578 | None:intergenic | 45.0% | |
| TCGAGTTTCCCACATAAACC+AGG | - | chr6_2:10392729-10392748 | None:intergenic | 45.0% | |
| GCTGAATTGAACGAGAACCT+CGG | + | chr6_2:10392937-10392956 | Msa0909230:CDS | 45.0% | |
| GAGAACCTCGGTGATCTAAA+TGG | + | chr6_2:10392949-10392968 | Msa0909230:CDS | 45.0% | |
| CAACACCATTTAGATCACCG+AGG | - | chr6_2:10392957-10392976 | None:intergenic | 45.0% | |
| GTTGAGAAGTTGAAGGCTGT+AGG | + | chr6_2:10392973-10392992 | Msa0909230:CDS | 45.0% | |
| ! | ATGCAATCACGAAAGTGCAC+TGG | + | chr6_2:10393031-10393050 | Msa0909230:CDS | 45.0% |
| ! | AATCACGAAAGTGCACTGGA+AGG | + | chr6_2:10393035-10393054 | Msa0909230:CDS | 45.0% |
| TCTCCATCACCACTGAAACA+GGG | - | chr6_2:10393063-10393082 | None:intergenic | 45.0% | |
| !! | TTTCAGTGGTGATGGAGAGT+GGG | + | chr6_2:10393065-10393084 | Msa0909230:CDS | 45.0% |
| GAAAATCCTTGAAGGGCCTA+AGG | + | chr6_2:10393155-10393174 | Msa0909230:CDS | 45.0% | |
| GACACAACAATTGGACGTAC+AGG | - | chr6_2:10393207-10393226 | None:intergenic | 45.0% | |
| TGACATTGTGACAGTCGAGA+AGG | + | chr6_2:10393493-10393512 | Msa0909230:CDS | 45.0% | |
| TGTTCAGGAACATCGGGAAT+GGG | - | chr6_2:10393578-10393597 | None:intergenic | 45.0% | |
| TCTTCCTGTTCAGGAACATC+GGG | - | chr6_2:10393584-10393603 | None:intergenic | 45.0% | |
| ATTGGGGACAGCAATAACTC+TGG | + | chr6_2:10393629-10393648 | Msa0909230:CDS | 45.0% | |
| GCTACCACTTCTTCCGAAAA+TGG | - | chr6_2:10393659-10393678 | None:intergenic | 45.0% | |
| TCGGAAGAAGTGGTAGCAAA+TGG | + | chr6_2:10393662-10393681 | Msa0909230:CDS | 45.0% | |
| ! | GAAACCATCAGAGAAGGTGT+TGG | + | chr6_2:10393983-10394002 | Msa0909230:CDS | 45.0% |
| AACTCCAACACCTTCTCTGA+TGG | - | chr6_2:10393990-10394009 | None:intergenic | 45.0% | |
| TCTGCTGTCATTCATCAGAC+AGG | - | chr6_2:10394121-10394140 | None:intergenic | 45.0% | |
| CTCCCATCACCAGTATTTGT+TGG | + | chr6_2:10392371-10392390 | Msa0909230:CDS | 45.0% | |
| TGACAAGTCGTTATCCCTGT+GGG | + | chr6_2:10392429-10392448 | Msa0909230:CDS | 45.0% | |
| GGGATGTCTTGAGTGGTAAA+AGG | + | chr6_2:10392449-10392468 | Msa0909230:CDS | 45.0% | |
| ATGAAGACGAGCTAGCAAAG+GGG | - | chr6_2:10392500-10392519 | None:intergenic | 45.0% | |
| GATGAAGACGAGCTAGCAAA+GGG | - | chr6_2:10392501-10392520 | None:intergenic | 45.0% | |
| TTTGCTAGCTCGTCTTCATC+CGG | + | chr6_2:10392501-10392520 | Msa0909230:CDS | 45.0% | |
| ! | CAAGCAGAGAGATGATTTGG+AGG | - | chr6_2:10392530-10392549 | None:intergenic | 45.0% |
| CTCCAAATCATCTCTCTGCT+TGG | + | chr6_2:10392528-10392547 | Msa0909230:CDS | 45.0% | |
| TGCCAAGCAGAGAGATGATT+TGG | - | chr6_2:10392533-10392552 | None:intergenic | 45.0% | |
| ATCATTGGAGCACATGAGAG+AGG | - | chr6_2:10392559-10392578 | None:intergenic | 45.0% | |
| TCGAGTTTCCCACATAAACC+AGG | - | chr6_2:10392729-10392748 | None:intergenic | 45.0% | |
| GCTGAATTGAACGAGAACCT+CGG | + | chr6_2:10392937-10392956 | Msa0909230:CDS | 45.0% | |
| GAGAACCTCGGTGATCTAAA+TGG | + | chr6_2:10392949-10392968 | Msa0909230:CDS | 45.0% | |
| CAACACCATTTAGATCACCG+AGG | - | chr6_2:10392957-10392976 | None:intergenic | 45.0% | |
| GTTGAGAAGTTGAAGGCTGT+AGG | + | chr6_2:10392973-10392992 | Msa0909230:CDS | 45.0% | |
| ! | ATGCAATCACGAAAGTGCAC+TGG | + | chr6_2:10393031-10393050 | Msa0909230:CDS | 45.0% |
| ! | AATCACGAAAGTGCACTGGA+AGG | + | chr6_2:10393035-10393054 | Msa0909230:CDS | 45.0% |
| TCTCCATCACCACTGAAACA+GGG | - | chr6_2:10393063-10393082 | None:intergenic | 45.0% | |
| !! | TTTCAGTGGTGATGGAGAGT+GGG | + | chr6_2:10393065-10393084 | Msa0909230:CDS | 45.0% |
| GAAAATCCTTGAAGGGCCTA+AGG | + | chr6_2:10393155-10393174 | Msa0909230:CDS | 45.0% | |
| GACACAACAATTGGACGTAC+AGG | - | chr6_2:10393207-10393226 | None:intergenic | 45.0% | |
| TGACATTGTGACAGTCGAGA+AGG | + | chr6_2:10393493-10393512 | Msa0909230:CDS | 45.0% | |
| TGTTCAGGAACATCGGGAAT+GGG | - | chr6_2:10393578-10393597 | None:intergenic | 45.0% | |
| TCTTCCTGTTCAGGAACATC+GGG | - | chr6_2:10393584-10393603 | None:intergenic | 45.0% | |
| ATTGGGGACAGCAATAACTC+TGG | + | chr6_2:10393629-10393648 | Msa0909230:CDS | 45.0% | |
| GCTACCACTTCTTCCGAAAA+TGG | - | chr6_2:10393659-10393678 | None:intergenic | 45.0% | |
| TCGGAAGAAGTGGTAGCAAA+TGG | + | chr6_2:10393662-10393681 | Msa0909230:CDS | 45.0% | |
| ! | GAAACCATCAGAGAAGGTGT+TGG | + | chr6_2:10393983-10394002 | Msa0909230:CDS | 45.0% |
| AACTCCAACACCTTCTCTGA+TGG | - | chr6_2:10393990-10394009 | None:intergenic | 45.0% | |
| TCTGCTGTCATTCATCAGAC+AGG | - | chr6_2:10394121-10394140 | None:intergenic | 45.0% | |
| CTGACAAGTCGTTATCCCTG+TGG | + | chr6_2:10392428-10392447 | Msa0909230:CDS | 50.0% | |
| ACCACTCAAGACATCCCACA+GGG | - | chr6_2:10392446-10392465 | None:intergenic | 50.0% | |
| TACCACTCAAGACATCCCAC+AGG | - | chr6_2:10392447-10392466 | None:intergenic | 50.0% | |
| GGATGAAGACGAGCTAGCAA+AGG | - | chr6_2:10392502-10392521 | None:intergenic | 50.0% | |
| TTGCTAGCTCGTCTTCATCC+GGG | + | chr6_2:10392502-10392521 | Msa0909230:CDS | 50.0% | |
| ! | AGAGATGATTTGGAGGACCC+CGG | - | chr6_2:10392523-10392542 | None:intergenic | 50.0% |
| TTGTTGCGTGAGACAGGGTT+TGG | - | chr6_2:10392646-10392665 | None:intergenic | 50.0% | |
| AAACCCTGTCTCACGCAACA+AGG | + | chr6_2:10392645-10392664 | Msa0909230:CDS | 50.0% | |
| AACCCTGTCTCACGCAACAA+GGG | + | chr6_2:10392646-10392665 | Msa0909230:CDS | 50.0% | |
| AACCCTTGTTGCGTGAGACA+GGG | - | chr6_2:10392651-10392670 | None:intergenic | 50.0% | |
| ! | TCACGCAACAAGGGTTCTGA+TGG | + | chr6_2:10392655-10392674 | Msa0909230:CDS | 50.0% |
| ACATGCAGCAGTAGGTGTGA+AGG | - | chr6_2:10392689-10392708 | None:intergenic | 50.0% | |
| AGTAAAGATGGTGAGGTGCG+TGG | + | chr6_2:10392772-10392791 | Msa0909230:intron | 50.0% | |
| CGTGGCATGGTTTCTATCTC+TGG | + | chr6_2:10392790-10392809 | Msa0909230:CDS | 50.0% | |
| GGCATGGTTTCTATCTCTGG+TGG | + | chr6_2:10392793-10392812 | Msa0909230:CDS | 50.0% | |
| CTCTCCATCACCACTGAAAC+AGG | - | chr6_2:10393064-10393083 | None:intergenic | 50.0% | |
| !! | GTTTCAGTGGTGATGGAGAG+TGG | + | chr6_2:10393064-10393083 | Msa0909230:CDS | 50.0% |
| !! | GTTGGTGGTTCTGCTAGCAA+AGG | + | chr6_2:10393090-10393109 | Msa0909230:CDS | 50.0% |
| CTGTTCAGGAACATCGGGAA+TGG | - | chr6_2:10393579-10393598 | None:intergenic | 50.0% | |
| CATTCCCGATGTTCCTGAAC+AGG | + | chr6_2:10393577-10393596 | Msa0909230:CDS | 50.0% | |
| ! | CTTCAAGTGGACTTGAGGCA+TGG | - | chr6_2:10393700-10393719 | None:intergenic | 50.0% |
| CATGCCTCAAGTCCACTTGA+AGG | + | chr6_2:10393698-10393717 | Msa0909230:CDS | 50.0% | |
| GGCGTGACATTACCTTCAAG+TGG | - | chr6_2:10393713-10393732 | None:intergenic | 50.0% | |
| AAGGCGGAAACCATCAGAGA+AGG | + | chr6_2:10393977-10393996 | Msa0909230:CDS | 50.0% | |
| !! | AGAGAAGGTGTTGGAGTTGC+AGG | + | chr6_2:10393992-10394011 | Msa0909230:CDS | 50.0% |
| CTGACAAGTCGTTATCCCTG+TGG | + | chr6_2:10392428-10392447 | Msa0909230:CDS | 50.0% | |
| ACCACTCAAGACATCCCACA+GGG | - | chr6_2:10392446-10392465 | None:intergenic | 50.0% | |
| TACCACTCAAGACATCCCAC+AGG | - | chr6_2:10392447-10392466 | None:intergenic | 50.0% | |
| GGATGAAGACGAGCTAGCAA+AGG | - | chr6_2:10392502-10392521 | None:intergenic | 50.0% | |
| TTGCTAGCTCGTCTTCATCC+GGG | + | chr6_2:10392502-10392521 | Msa0909230:CDS | 50.0% | |
| ! | AGAGATGATTTGGAGGACCC+CGG | - | chr6_2:10392523-10392542 | None:intergenic | 50.0% |
| TTGTTGCGTGAGACAGGGTT+TGG | - | chr6_2:10392646-10392665 | None:intergenic | 50.0% | |
| AAACCCTGTCTCACGCAACA+AGG | + | chr6_2:10392645-10392664 | Msa0909230:CDS | 50.0% | |
| AACCCTGTCTCACGCAACAA+GGG | + | chr6_2:10392646-10392665 | Msa0909230:CDS | 50.0% | |
| AACCCTTGTTGCGTGAGACA+GGG | - | chr6_2:10392651-10392670 | None:intergenic | 50.0% | |
| ! | TCACGCAACAAGGGTTCTGA+TGG | + | chr6_2:10392655-10392674 | Msa0909230:CDS | 50.0% |
| ACATGCAGCAGTAGGTGTGA+AGG | - | chr6_2:10392689-10392708 | None:intergenic | 50.0% | |
| AGTAAAGATGGTGAGGTGCG+TGG | + | chr6_2:10392772-10392791 | Msa0909230:intron | 50.0% | |
| CGTGGCATGGTTTCTATCTC+TGG | + | chr6_2:10392790-10392809 | Msa0909230:CDS | 50.0% | |
| GGCATGGTTTCTATCTCTGG+TGG | + | chr6_2:10392793-10392812 | Msa0909230:CDS | 50.0% | |
| CTCTCCATCACCACTGAAAC+AGG | - | chr6_2:10393064-10393083 | None:intergenic | 50.0% | |
| !! | GTTTCAGTGGTGATGGAGAG+TGG | + | chr6_2:10393064-10393083 | Msa0909230:CDS | 50.0% |
| !! | GTTGGTGGTTCTGCTAGCAA+AGG | + | chr6_2:10393090-10393109 | Msa0909230:CDS | 50.0% |
| CTGTTCAGGAACATCGGGAA+TGG | - | chr6_2:10393579-10393598 | None:intergenic | 50.0% | |
| CATTCCCGATGTTCCTGAAC+AGG | + | chr6_2:10393577-10393596 | Msa0909230:CDS | 50.0% | |
| ! | CTTCAAGTGGACTTGAGGCA+TGG | - | chr6_2:10393700-10393719 | None:intergenic | 50.0% |
| CATGCCTCAAGTCCACTTGA+AGG | + | chr6_2:10393698-10393717 | Msa0909230:CDS | 50.0% | |
| GGCGTGACATTACCTTCAAG+TGG | - | chr6_2:10393713-10393732 | None:intergenic | 50.0% | |
| AAGGCGGAAACCATCAGAGA+AGG | + | chr6_2:10393977-10393996 | Msa0909230:CDS | 50.0% | |
| !! | AGAGAAGGTGTTGGAGTTGC+AGG | + | chr6_2:10393992-10394011 | Msa0909230:CDS | 50.0% |
| TCCCTGTGGGATGTCTTGAG+TGG | + | chr6_2:10392442-10392461 | Msa0909230:CDS | 55.0% | |
| TGCTAGCTCGTCTTCATCCG+GGG | + | chr6_2:10392503-10392522 | Msa0909230:CDS | 55.0% | |
| ! | GAGACAGGGTTTGGTCCACT+TGG | - | chr6_2:10392637-10392656 | None:intergenic | 55.0% |
| GAACCCTTGTTGCGTGAGAC+AGG | - | chr6_2:10392652-10392671 | None:intergenic | 55.0% | |
| TGCAGCAGTAGGTGTGAAGG+AGG | - | chr6_2:10392686-10392705 | None:intergenic | 55.0% | |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | + | chr6_2:10393051-10393070 | Msa0909230:CDS | 55.0% |
| GCACCCTGTTTCAGTGGTGA+TGG | + | chr6_2:10393057-10393076 | Msa0909230:CDS | 55.0% | |
| !! | GGTGATGGAGAGTGGGTTGT+TGG | + | chr6_2:10393072-10393091 | Msa0909230:CDS | 55.0% |
| !! | GATGGAGAGTGGGTTGTTGG+TGG | + | chr6_2:10393075-10393094 | Msa0909230:CDS | 55.0% |
| CAGCGACTCTGATATGTCCG+AGG | + | chr6_2:10393526-10393545 | Msa0909230:CDS | 55.0% | |
| ACATCGGGAATGGGAGACAC+TGG | - | chr6_2:10393569-10393588 | None:intergenic | 55.0% | |
| TCCCTGTGGGATGTCTTGAG+TGG | + | chr6_2:10392442-10392461 | Msa0909230:CDS | 55.0% | |
| TGCTAGCTCGTCTTCATCCG+GGG | + | chr6_2:10392503-10392522 | Msa0909230:CDS | 55.0% | |
| ! | GAGACAGGGTTTGGTCCACT+TGG | - | chr6_2:10392637-10392656 | None:intergenic | 55.0% |
| GAACCCTTGTTGCGTGAGAC+AGG | - | chr6_2:10392652-10392671 | None:intergenic | 55.0% | |
| TGCAGCAGTAGGTGTGAAGG+AGG | - | chr6_2:10392686-10392705 | None:intergenic | 55.0% | |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | + | chr6_2:10393051-10393070 | Msa0909230:CDS | 55.0% |
| GCACCCTGTTTCAGTGGTGA+TGG | + | chr6_2:10393057-10393076 | Msa0909230:CDS | 55.0% | |
| !! | GGTGATGGAGAGTGGGTTGT+TGG | + | chr6_2:10393072-10393091 | Msa0909230:CDS | 55.0% |
| !! | GATGGAGAGTGGGTTGTTGG+TGG | + | chr6_2:10393075-10393094 | Msa0909230:CDS | 55.0% |
| CAGCGACTCTGATATGTCCG+AGG | + | chr6_2:10393526-10393545 | Msa0909230:CDS | 55.0% | |
| ACATCGGGAATGGGAGACAC+TGG | - | chr6_2:10393569-10393588 | None:intergenic | 55.0% | |
| AGATGGTGAGGTGCGTGGCA+TGG | + | chr6_2:10392777-10392796 | Msa0909230:CDS | 60.0% | |
| GGGCTTCCTTAGGCCCTTCA+AGG | - | chr6_2:10393164-10393183 | None:intergenic | 60.0% | |
| AGATGGTGAGGTGCGTGGCA+TGG | + | chr6_2:10392777-10392796 | Msa0909230:CDS | 60.0% | |
| GGGCTTCCTTAGGCCCTTCA+AGG | - | chr6_2:10393164-10393183 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 10392289 | 10394394 | 10392289 | ID=Msa0909230;Name=Msa0909230 |
| chr6_2 | mRNA | 10392289 | 10394394 | 10392289 | ID=Msa0909230-mRNA-1;Parent=Msa0909230;Name=Msa0909230-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.33|0.28|1|0.33|0.28|7|261|472 |
| chr6_2 | exon | 10392289 | 10392483 | 10392289 | ID=Msa0909230-mRNA-1:exon:2684;Parent=Msa0909230-mRNA-1 |
| chr6_2 | exon | 10392493 | 10392716 | 10392493 | ID=Msa0909230-mRNA-1:exon:2685;Parent=Msa0909230-mRNA-1 |
| chr6_2 | exon | 10392774 | 10393018 | 10392774 | ID=Msa0909230-mRNA-1:exon:2686;Parent=Msa0909230-mRNA-1 |
| chr6_2 | exon | 10393031 | 10393210 | 10393031 | ID=Msa0909230-mRNA-1:exon:2687;Parent=Msa0909230-mRNA-1 |
| chr6_2 | exon | 10393247 | 10393374 | 10393247 | ID=Msa0909230-mRNA-1:exon:2688;Parent=Msa0909230-mRNA-1 |
| chr6_2 | exon | 10393458 | 10393719 | 10393458 | ID=Msa0909230-mRNA-1:exon:2689;Parent=Msa0909230-mRNA-1 |
| chr6_2 | exon | 10393949 | 10394394 | 10393949 | ID=Msa0909230-mRNA-1:exon:2690;Parent=Msa0909230-mRNA-1 |
| chr6_2 | CDS | 10392289 | 10392483 | 10392289 | ID=Msa0909230-mRNA-1:cds;Parent=Msa0909230-mRNA-1 |
| chr6_2 | CDS | 10392493 | 10392716 | 10392493 | ID=Msa0909230-mRNA-1:cds;Parent=Msa0909230-mRNA-1 |
| chr6_2 | CDS | 10392774 | 10393018 | 10392774 | ID=Msa0909230-mRNA-1:cds;Parent=Msa0909230-mRNA-1 |
| chr6_2 | CDS | 10393031 | 10393210 | 10393031 | ID=Msa0909230-mRNA-1:cds;Parent=Msa0909230-mRNA-1 |
| chr6_2 | CDS | 10393247 | 10393374 | 10393247 | ID=Msa0909230-mRNA-1:cds;Parent=Msa0909230-mRNA-1 |
| chr6_2 | CDS | 10393458 | 10393719 | 10393458 | ID=Msa0909230-mRNA-1:cds;Parent=Msa0909230-mRNA-1 |
| chr6_2 | CDS | 10393949 | 10394133 | 10393949 | ID=Msa0909230-mRNA-1:cds;Parent=Msa0909230-mRNA-1 |
| chr6_2 | three_prime_UTR | 10394134 | 10394394 | 10394134 | ID=Msa0909230-mRNA-1:three_prime_utr;Parent=Msa0909230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
