AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1271990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271990 MtrunA17_Chr8g0336591 100.000 115 0 0 1 115 1 115 2.89e-83 238
Msa1271990 MtrunA17_Chr4g0055191 52.830 106 47 2 1 105 38 141 3.77e-32 110
Msa1271990 MtrunA17_Chr5g0400051 56.311 103 37 4 18 115 66 165 5.36e-31 107
Msa1271990 MtrunA17_Chr3g0124361 53.571 56 25 1 32 87 118 172 8.43e-16 69.7
Msa1271990 MtrunA17_Chr8g0344991 57.143 56 22 1 38 93 39 92 2.17e-15 67.0
Msa1271990 MtrunA17_Chr3g0115551 48.148 54 28 0 29 82 81 134 2.33e-14 65.1
Msa1271990 MtrunA17_Chr2g0301141 57.407 54 22 1 29 82 177 229 1.16e-13 64.7
Msa1271990 MtrunA17_Chr2g0295651 44.444 72 31 2 14 78 35 104 2.20e-12 59.7
Msa1271990 MtrunA17_Chr7g0260011 53.659 41 19 0 37 77 214 254 4.95e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271990 AT2G44670.1 54.878 82 37 0 34 115 12 93 2.52e-29 102
Msa1271990 AT4G17670.1 47.368 114 41 4 16 115 51 159 4.96e-27 98.2
Msa1271990 AT5G47060.2 53.571 84 36 2 35 115 94 177 1.11e-25 95.1
Msa1271990 AT5G47060.1 53.571 84 36 2 35 115 94 177 1.11e-25 95.1
Msa1271990 AT1G78020.1 48.529 68 33 1 15 82 68 133 1.07e-17 74.3
Msa1271990 AT5G65040.1 47.541 61 30 1 33 93 54 112 2.04e-16 69.7
Msa1271990 AT1G22160.1 44.118 68 34 2 15 82 59 122 7.57e-15 66.6
Msa1271990 AT1G53885.1 55.319 47 21 0 35 81 39 85 3.67e-14 64.3
Msa1271990 AT1G53903.1 55.319 47 21 0 35 81 39 85 3.67e-14 64.3
Msa1271990 AT5G49120.1 50.000 46 23 0 33 78 63 108 3.51e-11 57.0
Msa1271990 AT5G20700.1 57.778 45 18 1 38 82 182 225 5.08e-11 58.2

Find 36 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATAAAACATGCTAGATTT+TGG 0.214267 8_3:-5479987 None:intergenic
AAAGTATCAAAGATACTTTA+TGG 0.256012 8_3:+5480960 Msa1271990:three_prime_UTR
AGAATTTCTAACACCTCTTT+TGG 0.295222 8_3:-5480528 None:intergenic
ACATAAAGATGTCTTTGTTT+TGG 0.307802 8_3:-5480082 None:intergenic
GAGAAGGAGTTGGGAAAAGC+AGG 0.325602 8_3:-5479890 None:intergenic
TCAGAATTCTTCAAACAATA+AGG 0.335402 8_3:+5480559 Msa1271990:CDS
AGAGATTGAGAGAAGGAGTT+GGG 0.347307 8_3:-5479899 None:intergenic
TACTTTATGGAGAATCTAGA+TGG 0.388164 8_3:+5480973 Msa1271990:three_prime_UTR
ATTGTTTGAAGAATTCTGAT+TGG 0.437983 8_3:-5480555 None:intergenic
ATGAATCCAAAGAGAAAAGT+TGG 0.445108 8_3:+5480495 Msa1271990:CDS
TTCTACAAAGATAACAAGCT+TGG 0.448464 8_3:-5480049 None:intergenic
AATGGATCATAAATATTATG+AGG 0.452370 8_3:+5480900 Msa1271990:three_prime_UTR
GGAGAAGGGATTGAAGAAGA+TGG 0.454187 8_3:-5479966 None:intergenic
TCATCATCATGTGGTGTCCA+TGG 0.456612 8_3:+5481018 Msa1271990:three_prime_UTR
GAGAGATTGAGAGAAGGAGT+TGG 0.470356 8_3:-5479900 None:intergenic
TGGAAGATTTCAACCAAAAG+AGG 0.483181 8_3:+5480515 Msa1271990:CDS
AAAGAATAGTTAGCAGCCAT+TGG 0.486211 8_3:-5479930 None:intergenic
ACAAAGACATCTTTATGTAC+AGG 0.489194 8_3:+5480087 Msa1271990:CDS
TACAAAGATAACAAGCTTGG+AGG 0.501824 8_3:-5480046 None:intergenic
TATCTTTGTAGAAAACCTCT+TGG 0.507181 8_3:+5480059 Msa1271990:CDS
TACATCCTTTCATCATCATG+TGG 0.550154 8_3:+5481009 Msa1271990:three_prime_UTR
TGAGTTGAGAGATTGAGAGA+AGG 0.554490 8_3:-5479906 None:intergenic
ACTTTATGGAGAATCTAGAT+GGG 0.558477 8_3:+5480974 Msa1271990:three_prime_UTR
CAATCTCTCAACTCAACCAA+TGG 0.563428 8_3:+5479914 Msa1271990:exon
CTGCACTCATTGCTACAGAA+TGG 0.599412 8_3:-5480452 None:intergenic
CATTCTGTAGCAATGAGTGC+AGG 0.607408 8_3:+5480453 Msa1271990:CDS
AGAAGGAGTTGGGAAAAGCA+GGG 0.626374 8_3:-5479889 None:intergenic
GGATCATAAATATTATGAGG+CGG 0.629799 8_3:+5480903 Msa1271990:three_prime_UTR
TTAAAATCACATGACATGAG+TGG 0.637461 8_3:+5480614 Msa1271990:three_prime_UTR
AAGATCAGAATCAGTTGCAG+TGG 0.640103 8_3:+5480586 Msa1271990:CDS
TAGAATCTAGAATAGATACA+TGG 0.642392 8_3:+5481093 Msa1271990:three_prime_UTR
TAACAAGCTTGGAGGAAGTG+AGG 0.645660 8_3:-5480038 None:intergenic
ATGAAGATTCTGATAAAACA+AGG 0.650615 8_3:+5480705 Msa1271990:three_prime_UTR
GGACACCACATGATGATGAA+AGG 0.656135 8_3:-5481014 None:intergenic
AGATACATGGAATTATGACA+TGG 0.682329 8_3:+5481106 Msa1271990:three_prime_UTR
CTTTATGGAGAATCTAGATG+GGG 0.689450 8_3:+5480975 Msa1271990:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGATGTAAAATAATTATT+TGG + chr8_3:5480334-5480353 Msa1271990:intron 10.0%
!! ATGAGAAAAAAAAAATAAAA+AGG - chr8_3:5480849-5480868 None:intergenic 10.0%
!! TTTGATGTAAAATAATTATT+TGG + chr8_3:5480334-5480353 Msa1271990:intron 10.0%
!! ATGAGAAAAAAAAAATAAAA+AGG - chr8_3:5480849-5480868 None:intergenic 10.0%
!!! AGAGAACTTTTTTAATTATT+TGG + chr8_3:5480363-5480382 Msa1271990:intron 15.0%
!! TTGAAAAAAAAATTATGAAG+TGG + chr8_3:5480656-5480675 Msa1271990:three_prime_UTR 15.0%
!!! AGAGAACTTTTTTAATTATT+TGG + chr8_3:5480363-5480382 Msa1271990:intron 15.0%
!! TTGAAAAAAAAATTATGAAG+TGG + chr8_3:5480656-5480675 Msa1271990:three_prime_UTR 15.0%
!!! TAATAAAACATGCTAGATTT+TGG - chr8_3:5479990-5480009 None:intergenic 20.0%
!!! AAATCTAGCATGTTTTATTA+TGG + chr8_3:5479990-5480009 Msa1271990:CDS 20.0%
!!! TTTACACTTAATTTTCATGT+AGG + chr8_3:5480182-5480201 Msa1271990:intron 20.0%
!!! TTATAATTGTGATTTTTCAG+AGG + chr8_3:5480422-5480441 Msa1271990:intron 20.0%
!!! TATAATTGTGATTTTTCAGA+GGG + chr8_3:5480423-5480442 Msa1271990:intron 20.0%
!! TCTCTTGTAAAAAAAATTGT+TGG + chr8_3:5480742-5480761 Msa1271990:three_prime_UTR 20.0%
!! ATAGAAAAAAAAACTCAACA+AGG + chr8_3:5480778-5480797 Msa1271990:three_prime_UTR 20.0%
!!! TTTTTTTTTCCCATAGAATT+TGG - chr8_3:5480882-5480901 None:intergenic 20.0%
!! AATTCTATGGGAAAAAAAAA+TGG + chr8_3:5480882-5480901 Msa1271990:three_prime_UTR 20.0%
!! AATGGATCATAAATATTATG+AGG + chr8_3:5480900-5480919 Msa1271990:three_prime_UTR 20.0%
!!! TTTTTGTTGTCTCAATTTTA+TGG - chr8_3:5480938-5480957 None:intergenic 20.0%
!!! AAAGTATCAAAGATACTTTA+TGG + chr8_3:5480960-5480979 Msa1271990:three_prime_UTR 20.0%
!!! GTATTTTTTATTCAAATCCA+TGG - chr8_3:5481038-5481057 None:intergenic 20.0%
!!! ATAGATTGAGAATTTTTCTA+CGG - chr8_3:5481067-5481086 None:intergenic 20.0%
!!! TAATAAAACATGCTAGATTT+TGG - chr8_3:5479990-5480009 None:intergenic 20.0%
!!! AAATCTAGCATGTTTTATTA+TGG + chr8_3:5479990-5480009 Msa1271990:CDS 20.0%
!!! TTTACACTTAATTTTCATGT+AGG + chr8_3:5480182-5480201 Msa1271990:intron 20.0%
!!! TTATAATTGTGATTTTTCAG+AGG + chr8_3:5480422-5480441 Msa1271990:intron 20.0%
!!! TATAATTGTGATTTTTCAGA+GGG + chr8_3:5480423-5480442 Msa1271990:intron 20.0%
!! TCTCTTGTAAAAAAAATTGT+TGG + chr8_3:5480742-5480761 Msa1271990:three_prime_UTR 20.0%
!! ATAGAAAAAAAAACTCAACA+AGG + chr8_3:5480778-5480797 Msa1271990:three_prime_UTR 20.0%
!!! TTTTTTTTTCCCATAGAATT+TGG - chr8_3:5480882-5480901 None:intergenic 20.0%
!! AATTCTATGGGAAAAAAAAA+TGG + chr8_3:5480882-5480901 Msa1271990:three_prime_UTR 20.0%
!! AATGGATCATAAATATTATG+AGG + chr8_3:5480900-5480919 Msa1271990:three_prime_UTR 20.0%
!!! TTTTTGTTGTCTCAATTTTA+TGG - chr8_3:5480938-5480957 None:intergenic 20.0%
!!! AAAGTATCAAAGATACTTTA+TGG + chr8_3:5480960-5480979 Msa1271990:three_prime_UTR 20.0%
!!! GTATTTTTTATTCAAATCCA+TGG - chr8_3:5481038-5481057 None:intergenic 20.0%
!!! ATAGATTGAGAATTTTTCTA+CGG - chr8_3:5481067-5481086 None:intergenic 20.0%
!!! ACATAAAGATGTCTTTGTTT+TGG - chr8_3:5480085-5480104 None:intergenic 25.0%
! AAAAAGATGAAGGAAAATTG+AGG - chr8_3:5480131-5480150 None:intergenic 25.0%
! AAAGTATAAAGATTCATCTG+GGG - chr8_3:5480160-5480179 None:intergenic 25.0%
! CAAAGTATAAAGATTCATCT+GGG - chr8_3:5480161-5480180 None:intergenic 25.0%
! ACAAAGTATAAAGATTCATC+TGG - chr8_3:5480162-5480181 None:intergenic 25.0%
! ATTGTTTGAAGAATTCTGAT+TGG - chr8_3:5480558-5480577 None:intergenic 25.0%
! TCAGAATTCTTCAAACAATA+AGG + chr8_3:5480559-5480578 Msa1271990:CDS 25.0%
!!! CATGTCATGTGATTTTAATT+AGG - chr8_3:5480612-5480631 None:intergenic 25.0%
!! TTTTATCAGAATCTTCATGA+TGG - chr8_3:5480703-5480722 None:intergenic 25.0%
! ATGAAGATTCTGATAAAACA+AGG + chr8_3:5480705-5480724 Msa1271990:three_prime_UTR 25.0%
!! AAAAACTCAACAAGGAATTT+TGG + chr8_3:5480786-5480805 Msa1271990:three_prime_UTR 25.0%
!! ATTTTCTCTTCCAAATTCTA+TGG + chr8_3:5480869-5480888 Msa1271990:three_prime_UTR 25.0%
!! TTTTCTCTTCCAAATTCTAT+GGG + chr8_3:5480870-5480889 Msa1271990:three_prime_UTR 25.0%
!! TAGAATCTAGAATAGATACA+TGG + chr8_3:5481093-5481112 Msa1271990:three_prime_UTR 25.0%
!!! ACATAAAGATGTCTTTGTTT+TGG - chr8_3:5480085-5480104 None:intergenic 25.0%
! AAAAAGATGAAGGAAAATTG+AGG - chr8_3:5480131-5480150 None:intergenic 25.0%
! AAAGTATAAAGATTCATCTG+GGG - chr8_3:5480160-5480179 None:intergenic 25.0%
! CAAAGTATAAAGATTCATCT+GGG - chr8_3:5480161-5480180 None:intergenic 25.0%
! ACAAAGTATAAAGATTCATC+TGG - chr8_3:5480162-5480181 None:intergenic 25.0%
! ATTGTTTGAAGAATTCTGAT+TGG - chr8_3:5480558-5480577 None:intergenic 25.0%
! TCAGAATTCTTCAAACAATA+AGG + chr8_3:5480559-5480578 Msa1271990:CDS 25.0%
!!! CATGTCATGTGATTTTAATT+AGG - chr8_3:5480612-5480631 None:intergenic 25.0%
!! TTTTATCAGAATCTTCATGA+TGG - chr8_3:5480703-5480722 None:intergenic 25.0%
! ATGAAGATTCTGATAAAACA+AGG + chr8_3:5480705-5480724 Msa1271990:three_prime_UTR 25.0%
!! AAAAACTCAACAAGGAATTT+TGG + chr8_3:5480786-5480805 Msa1271990:three_prime_UTR 25.0%
!! ATTTTCTCTTCCAAATTCTA+TGG + chr8_3:5480869-5480888 Msa1271990:three_prime_UTR 25.0%
!! TTTTCTCTTCCAAATTCTAT+GGG + chr8_3:5480870-5480889 Msa1271990:three_prime_UTR 25.0%
!! TAGAATCTAGAATAGATACA+TGG + chr8_3:5481093-5481112 Msa1271990:three_prime_UTR 25.0%
!! TCTAGCATGTTTTATTATGG+TGG + chr8_3:5479993-5480012 Msa1271990:CDS 30.0%
TTCTACAAAGATAACAAGCT+TGG - chr8_3:5480052-5480071 None:intergenic 30.0%
TATCTTTGTAGAAAACCTCT+TGG + chr8_3:5480059-5480078 Msa1271990:CDS 30.0%
ACAAAGACATCTTTATGTAC+AGG + chr8_3:5480087-5480106 Msa1271990:CDS 30.0%
GTAGGTCATAACTCATAATA+AGG + chr8_3:5480200-5480219 Msa1271990:intron 30.0%
ATGAATCCAAAGAGAAAAGT+TGG + chr8_3:5480495-5480514 Msa1271990:CDS 30.0%
! AATCTTCCAACTTTTCTCTT+TGG - chr8_3:5480504-5480523 None:intergenic 30.0%
! AGAATTTCTAACACCTCTTT+TGG - chr8_3:5480531-5480550 None:intergenic 30.0%
TTAAAATCACATGACATGAG+TGG + chr8_3:5480614-5480633 Msa1271990:three_prime_UTR 30.0%
GGATCATAAATATTATGAGG+CGG + chr8_3:5480903-5480922 Msa1271990:three_prime_UTR 30.0%
TACTTTATGGAGAATCTAGA+TGG + chr8_3:5480973-5480992 Msa1271990:three_prime_UTR 30.0%
ACTTTATGGAGAATCTAGAT+GGG + chr8_3:5480974-5480993 Msa1271990:three_prime_UTR 30.0%
AGATACATGGAATTATGACA+TGG + chr8_3:5481106-5481125 Msa1271990:three_prime_UTR 30.0%
!! TCTAGCATGTTTTATTATGG+TGG + chr8_3:5479993-5480012 Msa1271990:CDS 30.0%
TTCTACAAAGATAACAAGCT+TGG - chr8_3:5480052-5480071 None:intergenic 30.0%
TATCTTTGTAGAAAACCTCT+TGG + chr8_3:5480059-5480078 Msa1271990:CDS 30.0%
ACAAAGACATCTTTATGTAC+AGG + chr8_3:5480087-5480106 Msa1271990:CDS 30.0%
GTAGGTCATAACTCATAATA+AGG + chr8_3:5480200-5480219 Msa1271990:intron 30.0%
ATGAATCCAAAGAGAAAAGT+TGG + chr8_3:5480495-5480514 Msa1271990:CDS 30.0%
! AATCTTCCAACTTTTCTCTT+TGG - chr8_3:5480504-5480523 None:intergenic 30.0%
! AGAATTTCTAACACCTCTTT+TGG - chr8_3:5480531-5480550 None:intergenic 30.0%
TTAAAATCACATGACATGAG+TGG + chr8_3:5480614-5480633 Msa1271990:three_prime_UTR 30.0%
GGATCATAAATATTATGAGG+CGG + chr8_3:5480903-5480922 Msa1271990:three_prime_UTR 30.0%
TACTTTATGGAGAATCTAGA+TGG + chr8_3:5480973-5480992 Msa1271990:three_prime_UTR 30.0%
ACTTTATGGAGAATCTAGAT+GGG + chr8_3:5480974-5480993 Msa1271990:three_prime_UTR 30.0%
AGATACATGGAATTATGACA+TGG + chr8_3:5481106-5481125 Msa1271990:three_prime_UTR 30.0%
AAAGAATAGTTAGCAGCCAT+TGG - chr8_3:5479933-5479952 None:intergenic 35.0%
!! ACATGCTAGATTTTGGAGAA+GGG - chr8_3:5479983-5480002 None:intergenic 35.0%
!! AACATGCTAGATTTTGGAGA+AGG - chr8_3:5479984-5480003 None:intergenic 35.0%
TACAAAGATAACAAGCTTGG+AGG - chr8_3:5480049-5480068 None:intergenic 35.0%
TGGAAGATTTCAACCAAAAG+AGG + chr8_3:5480515-5480534 Msa1271990:CDS 35.0%
CTTTATGGAGAATCTAGATG+GGG + chr8_3:5480975-5480994 Msa1271990:three_prime_UTR 35.0%
TACATCCTTTCATCATCATG+TGG + chr8_3:5481009-5481028 Msa1271990:three_prime_UTR 35.0%
AAAGAATAGTTAGCAGCCAT+TGG - chr8_3:5479933-5479952 None:intergenic 35.0%
!! ACATGCTAGATTTTGGAGAA+GGG - chr8_3:5479983-5480002 None:intergenic 35.0%
!! AACATGCTAGATTTTGGAGA+AGG - chr8_3:5479984-5480003 None:intergenic 35.0%
TACAAAGATAACAAGCTTGG+AGG - chr8_3:5480049-5480068 None:intergenic 35.0%
TGGAAGATTTCAACCAAAAG+AGG + chr8_3:5480515-5480534 Msa1271990:CDS 35.0%
CTTTATGGAGAATCTAGATG+GGG + chr8_3:5480975-5480994 Msa1271990:three_prime_UTR 35.0%
TACATCCTTTCATCATCATG+TGG + chr8_3:5481009-5481028 Msa1271990:three_prime_UTR 35.0%
AGAGATTGAGAGAAGGAGTT+GGG - chr8_3:5479902-5479921 None:intergenic 40.0%
! TGAGTTGAGAGATTGAGAGA+AGG - chr8_3:5479909-5479928 None:intergenic 40.0%
CAATCTCTCAACTCAACCAA+TGG + chr8_3:5479914-5479933 Msa1271990:exon 40.0%
!!! ATGTCTTTGTTTTGGCCAAG+AGG - chr8_3:5480077-5480096 None:intergenic 40.0%
AAGATCAGAATCAGTTGCAG+TGG + chr8_3:5480586-5480605 Msa1271990:CDS 40.0%
AGAGATTGAGAGAAGGAGTT+GGG - chr8_3:5479902-5479921 None:intergenic 40.0%
! TGAGTTGAGAGATTGAGAGA+AGG - chr8_3:5479909-5479928 None:intergenic 40.0%
CAATCTCTCAACTCAACCAA+TGG + chr8_3:5479914-5479933 Msa1271990:exon 40.0%
!!! ATGTCTTTGTTTTGGCCAAG+AGG - chr8_3:5480077-5480096 None:intergenic 40.0%
AAGATCAGAATCAGTTGCAG+TGG + chr8_3:5480586-5480605 Msa1271990:CDS 40.0%
AGAAGGAGTTGGGAAAAGCA+GGG - chr8_3:5479892-5479911 None:intergenic 45.0%
GAGAGATTGAGAGAAGGAGT+TGG - chr8_3:5479903-5479922 None:intergenic 45.0%
GGAGAAGGGATTGAAGAAGA+TGG - chr8_3:5479969-5479988 None:intergenic 45.0%
TAACAAGCTTGGAGGAAGTG+AGG - chr8_3:5480041-5480060 None:intergenic 45.0%
GGGGTGTGACAAAAAGATGA+AGG - chr8_3:5480141-5480160 None:intergenic 45.0%
CTGCACTCATTGCTACAGAA+TGG - chr8_3:5480455-5480474 None:intergenic 45.0%
CATTCTGTAGCAATGAGTGC+AGG + chr8_3:5480453-5480472 Msa1271990:CDS 45.0%
! GGACACCACATGATGATGAA+AGG - chr8_3:5481017-5481036 None:intergenic 45.0%
TCATCATCATGTGGTGTCCA+TGG + chr8_3:5481018-5481037 Msa1271990:three_prime_UTR 45.0%
AGAAGGAGTTGGGAAAAGCA+GGG - chr8_3:5479892-5479911 None:intergenic 45.0%
GAGAGATTGAGAGAAGGAGT+TGG - chr8_3:5479903-5479922 None:intergenic 45.0%
GGAGAAGGGATTGAAGAAGA+TGG - chr8_3:5479969-5479988 None:intergenic 45.0%
TAACAAGCTTGGAGGAAGTG+AGG - chr8_3:5480041-5480060 None:intergenic 45.0%
GGGGTGTGACAAAAAGATGA+AGG - chr8_3:5480141-5480160 None:intergenic 45.0%
CTGCACTCATTGCTACAGAA+TGG - chr8_3:5480455-5480474 None:intergenic 45.0%
CATTCTGTAGCAATGAGTGC+AGG + chr8_3:5480453-5480472 Msa1271990:CDS 45.0%
! GGACACCACATGATGATGAA+AGG - chr8_3:5481017-5481036 None:intergenic 45.0%
TCATCATCATGTGGTGTCCA+TGG + chr8_3:5481018-5481037 Msa1271990:three_prime_UTR 45.0%
GAGAAGGAGTTGGGAAAAGC+AGG - chr8_3:5479893-5479912 None:intergenic 50.0%
GAGAAGGAGTTGGGAAAAGC+AGG - chr8_3:5479893-5479912 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 5479880 5481130 5479880 ID=Msa1271990;Name=Msa1271990
chr8_3 mRNA 5479880 5481130 5479880 ID=Msa1271990-mRNA-1;Parent=Msa1271990;Name=Msa1271990-mRNA-1;_AED=0.00;_eAED=0.00;_QI=53|1|1|1|1|1|2|517|115
chr8_3 exon 5479880 5480108 5479880 ID=Msa1271990-mRNA-1:exon:1951;Parent=Msa1271990-mRNA-1
chr8_3 exon 5480442 5481130 5480442 ID=Msa1271990-mRNA-1:exon:1952;Parent=Msa1271990-mRNA-1
chr8_3 five_prime_UTR 5479880 5479932 5479880 ID=Msa1271990-mRNA-1:five_prime_utr;Parent=Msa1271990-mRNA-1
chr8_3 CDS 5479933 5480108 5479933 ID=Msa1271990-mRNA-1:cds;Parent=Msa1271990-mRNA-1
chr8_3 CDS 5480442 5480613 5480442 ID=Msa1271990-mRNA-1:cds;Parent=Msa1271990-mRNA-1
chr8_3 three_prime_UTR 5480614 5481130 5480614 ID=Msa1271990-mRNA-1:three_prime_utr;Parent=Msa1271990-mRNA-1
Gene Sequence

>Msa1271990

ATGGCTGCTAACTATTCTTTCTCTTCTTCATCACCATCTTCTTCAATCCCTTCTCCAAAATCTAGCATGTTTTATTATGGTGGAAGTGAAGATTTCTATGATGAACCTCACTTCCTCCAAGCTTGTTATCTTTGTAGAAAACCTCTTGGCCAAAACAAAGACATCTTTATGTACAGAGGGAACACACCATTCTGTAGCAATGAGTGCAGGCAAGAACAAATAGAGATTGATGAATCCAAAGAGAAAAGTTGGAAGATTTCAACCAAAAGAGGTGTTAGAAATTCTGAAACCAATCAGAATTCTTCAAACAATAAGGCTGTAAGATCAGAATCAGTTGCAGTGGCCTAA

Protein sequence

>Msa1271990

MAANYSFSSSSPSSSIPSPKSSMFYYGGSEDFYDEPHFLQACYLCRKPLGQNKDIFMYRGNTPFCSNECRQEQIEIDESKEKSWKISTKRGVRNSETNQNSSNNKAVRSESVAVA*