AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0768570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0768570 MtrunA17_Chr5g0419631 94.149 376 22 0 19 394 285 660 0.0 723
Msa0768570 MtrunA17_Chr5g0419341 93.883 376 23 0 19 394 289 664 0.0 721
Msa0768570 MtrunA17_Chr4g0042181 34.226 336 209 6 65 392 454 785 1.90e-62 214
Msa0768570 MtrunA17_Chr1g0181661 27.222 360 248 5 47 392 342 701 6.56e-38 145
Msa0768570 MtrunA17_Chr4g0055401 25.378 331 200 9 72 393 394 686 9.84e-28 115
Msa0768570 MtrunA17_Chr1g0170071 28.877 187 126 3 104 289 626 806 1.37e-15 79.0
Msa0768570 MtrunA17_Chr1g0170071 21.033 271 203 3 78 348 526 785 7.06e-11 64.3
Msa0768570 MtrunA17_Chr6g0481971 24.000 300 211 5 10 303 215 503 9.52e-15 75.9
Msa0768570 MtrunA17_Chr2g0298541 24.407 295 214 6 25 317 90 377 1.19e-14 75.9
Msa0768570 MtrunA17_Chr6g0458411 23.695 249 172 4 64 305 271 508 2.23e-14 74.7
Msa0768570 MtrunA17_Chr6g0471871 24.686 239 169 5 59 294 275 505 2.56e-14 74.7
Msa0768570 MtrunA17_Chr5g0446031 23.113 212 158 4 106 316 593 800 2.98e-14 74.7
Msa0768570 MtrunA17_Chr1g0171281 26.047 215 150 3 103 317 312 517 1.02e-13 72.8
Msa0768570 MtrunA17_Chr5g0419551 27.119 236 162 4 100 334 320 546 1.34e-13 72.4
Msa0768570 MtrunA17_Chr3g0102961 24.686 239 168 5 64 299 281 510 4.53e-13 70.5
Msa0768570 MtrunA17_Chr3g0102961 23.361 244 169 4 118 356 157 387 1.66e-11 65.9
Msa0768570 MtrunA17_Chr6g0482611 25.439 228 166 2 61 288 277 500 8.07e-13 70.1
Msa0768570 MtrunA17_Chr8g0391651 24.590 244 175 4 101 343 242 477 8.73e-13 70.1
Msa0768570 MtrunA17_Chr8g0391651 21.739 207 157 2 85 287 328 533 1.49e-11 66.2
Msa0768570 MtrunA17_Chr7g0217921 24.424 217 150 3 147 360 202 407 1.43e-12 69.3
Msa0768570 MtrunA17_Chr7g0217921 21.091 275 201 4 60 334 223 481 1.85e-11 65.9
Msa0768570 MtrunA17_Chr2g0332881 24.549 277 177 7 92 356 197 453 1.50e-12 69.3
Msa0768570 MtrunA17_Chr4g0048611 27.315 216 117 4 129 305 213 427 1.77e-12 69.3
Msa0768570 MtrunA17_Chr7g0246931 25.414 181 133 2 106 285 111 290 3.18e-12 68.2
Msa0768570 MtrunA17_Chr6g0482841 25.767 163 120 1 141 303 1 162 4.60e-12 64.7
Msa0768570 MtrunA17_Chr6g0481981 25.630 238 161 5 56 287 171 398 4.92e-12 67.4
Msa0768570 MtrunA17_Chr1g0182521 27.168 173 125 1 117 289 394 565 6.48e-12 67.4
Msa0768570 MtrunA17_Chr7g0215561 24.771 218 156 3 117 329 398 612 7.01e-12 67.0
Msa0768570 MtrunA17_Chr6g0473241 24.335 263 179 8 61 316 266 515 7.53e-12 67.0
Msa0768570 MtrunA17_Chr6g0473241 19.792 288 216 7 93 375 155 432 6.84e-11 63.9
Msa0768570 MtrunA17_Chr6g0477341 23.193 332 226 7 10 335 281 589 8.57e-12 66.6
Msa0768570 MtrunA17_Chr6g0481991 25.581 172 127 1 117 288 355 525 9.08e-12 66.6
Msa0768570 MtrunA17_Chr5g0442231 22.761 268 160 6 114 344 421 678 1.31e-11 66.2
Msa0768570 MtrunA17_Chr8g0359551 23.770 244 182 2 61 304 246 485 2.10e-11 65.5
Msa0768570 MtrunA17_Chr6g0482901 24.257 202 148 4 117 317 330 527 2.11e-11 65.5
Msa0768570 MtrunA17_Chr6g0473491 24.473 237 172 5 59 294 264 494 2.48e-11 65.1
Msa0768570 MtrunA17_Chr6g0479541 24.206 252 181 5 58 305 324 569 2.59e-11 65.5
Msa0768570 MtrunA17_Chr6g0473031 25.333 225 158 4 64 285 283 500 2.76e-11 65.1
Msa0768570 MtrunA17_Chr7g0257371 23.600 250 173 6 105 349 437 673 2.88e-11 65.5
Msa0768570 MtrunA17_Chr6g0482571 18.182 374 274 5 10 380 61 405 3.07e-11 64.7
Msa0768570 MtrunA17_Chr4g0060341 23.626 182 138 1 106 287 314 494 5.58e-11 64.3
Msa0768570 MtrunA17_Chr7g0260101 22.979 235 169 5 55 285 102 328 6.41e-11 63.2
Msa0768570 MtrunA17_Chr2g0297211 23.629 237 173 4 106 342 185 413 6.65e-11 64.3
Msa0768570 MtrunA17_Chr4g0037841 26.531 196 130 4 141 333 384 568 7.35e-11 63.9
Msa0768570 MtrunA17_Chr4g0060641 22.957 257 178 5 106 356 187 429 8.30e-11 63.9
Msa0768570 MtrunA17_Chr6g0482651 22.596 208 157 3 117 324 316 519 8.36e-11 63.5
Msa0768570 MtrunA17_Chr2g0296811 25.478 157 115 2 138 294 13 167 8.75e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0768570 AT1G69290.1 70.765 366 102 3 30 393 295 657 0.0 536
Msa0768570 AT1G68980.1 63.435 361 120 3 30 390 267 615 1.50e-160 465
Msa0768570 AT1G03100.1 35.693 339 205 7 63 393 460 793 8.52e-68 229
Msa0768570 AT3G09650.1 29.213 356 232 4 56 392 408 762 2.65e-45 167
Msa0768570 AT4G17616.1 24.809 262 163 5 106 367 416 643 9.30e-24 103
Msa0768570 AT5G04810.1 25.882 255 173 4 105 352 629 874 1.98e-15 79.0
Msa0768570 AT1G62720.1 27.404 208 137 4 106 310 285 481 3.55e-15 77.4
Msa0768570 AT3G54980.1 25.794 252 167 4 86 324 420 664 9.00e-15 76.6
Msa0768570 AT3G54980.2 25.794 252 167 4 86 324 420 664 9.00e-15 76.6
Msa0768570 AT5G38730.1 26.556 241 161 5 106 346 209 433 1.06e-14 76.3
Msa0768570 AT1G12620.1 27.586 203 140 3 117 317 369 566 1.96e-14 75.5
Msa0768570 AT1G64100.2 25.571 219 155 3 141 359 438 648 2.33e-14 75.5
Msa0768570 AT1G64100.2 24.771 218 156 2 118 335 209 418 3.44e-12 68.6
Msa0768570 AT1G62680.1 25.346 217 153 4 88 297 108 322 3.11e-14 74.7
Msa0768570 AT1G62680.2 25.346 217 153 4 88 297 108 322 3.11e-14 74.7
Msa0768570 AT1G63080.2 25.490 204 145 2 105 305 210 409 3.19e-14 74.7
Msa0768570 AT1G63080.1 25.490 204 145 2 105 305 210 409 3.19e-14 74.7
Msa0768570 AT1G63080.3 25.490 204 145 2 105 305 210 409 3.19e-14 74.7
Msa0768570 AT1G64100.1 25.854 205 144 3 141 345 438 634 3.78e-14 74.7
Msa0768570 AT1G64100.1 24.771 218 156 2 118 335 209 418 4.44e-12 68.2
Msa0768570 AT1G64100.3 25.854 205 144 3 141 345 438 634 3.78e-14 74.7
Msa0768570 AT1G64100.3 24.771 218 156 2 118 335 209 418 4.44e-12 68.2
Msa0768570 AT1G63230.1 25.877 228 161 3 84 305 20 245 7.20e-14 72.4
Msa0768570 AT5G64320.1 27.473 182 127 2 106 285 430 608 1.92e-13 72.4
Msa0768570 AT5G61400.1 22.870 223 165 2 86 305 185 403 4.45e-13 71.2
Msa0768570 AT5G39710.1 22.727 264 195 4 42 305 295 549 4.82e-13 71.2
Msa0768570 AT5G50280.1 24.231 260 188 3 89 347 333 584 8.62e-13 70.5
Msa0768570 AT5G50280.1 22.500 200 152 3 89 286 297 495 3.44e-11 65.5
Msa0768570 AT1G12300.1 26.633 199 139 3 117 313 385 578 1.72e-12 69.3
Msa0768570 AT3G06920.1 21.801 211 162 2 106 316 558 765 1.89e-12 69.7
Msa0768570 AT1G63400.1 25.481 208 147 3 106 309 231 434 1.94e-12 69.3
Msa0768570 AT1G63150.2 24.878 205 152 2 106 309 229 432 2.11e-12 69.3
Msa0768570 AT1G63150.1 24.878 205 152 2 106 309 229 432 2.11e-12 69.3
Msa0768570 AT1G63330.3 26.087 230 161 4 86 311 272 496 2.33e-12 68.9
Msa0768570 AT1G63330.1 26.087 230 161 4 86 311 272 496 2.33e-12 68.9
Msa0768570 AT1G63330.2 26.087 230 161 4 86 311 272 496 2.33e-12 68.9
Msa0768570 AT3G06920.2 21.801 211 162 2 106 316 572 779 2.37e-12 69.3
Msa0768570 AT3G06920.3 21.801 211 162 2 106 316 572 779 2.37e-12 69.3
Msa0768570 AT1G62670.2 23.684 266 186 5 42 303 311 563 2.96e-12 68.6
Msa0768570 AT1G62670.1 23.684 266 186 5 42 303 311 563 2.96e-12 68.6
Msa0768570 AT3G16710.1 30.387 181 124 2 106 285 123 302 3.31e-12 68.2
Msa0768570 AT4G11690.1 23.280 189 144 1 117 305 320 507 3.64e-12 68.2
Msa0768570 AT4G11690.1 24.324 222 163 4 104 324 166 383 3.28e-11 65.5
Msa0768570 AT4G11690.2 23.280 189 144 1 117 305 293 480 3.67e-12 68.2
Msa0768570 AT3G16710.2 30.387 181 124 2 106 285 123 302 3.77e-12 68.2
Msa0768570 AT1G63130.1 26.761 213 147 4 102 309 222 430 4.08e-12 68.2
Msa0768570 AT1G63130.1 26.286 175 124 2 137 311 398 567 8.54e-12 67.4
Msa0768570 AT1G63130.2 26.761 213 147 4 102 309 222 430 4.08e-12 68.2
Msa0768570 AT1G63130.2 26.286 175 124 2 137 311 398 567 8.54e-12 67.4
Msa0768570 AT5G41170.3 27.219 169 122 1 119 287 26 193 4.21e-12 67.8
Msa0768570 AT5G41170.1 27.219 169 122 1 119 287 126 293 4.35e-12 68.2
Msa0768570 AT5G41170.2 27.219 169 122 1 119 287 126 293 4.40e-12 67.8
Msa0768570 AT5G25630.3 22.951 183 139 1 107 287 1 183 4.94e-12 67.8
Msa0768570 AT5G25630.2 22.826 184 140 1 106 287 51 234 5.07e-12 67.8
Msa0768570 AT5G25630.1 22.826 184 140 1 106 287 51 234 5.25e-12 67.8
Msa0768570 AT2G39230.1 22.388 201 155 1 105 305 595 794 7.20e-12 67.8
Msa0768570 AT5G65560.1 24.091 220 123 5 137 356 325 500 8.31e-12 67.4
Msa0768570 AT5G65560.2 24.091 220 123 5 137 356 325 500 8.31e-12 67.4
Msa0768570 AT5G65560.3 24.091 220 123 5 137 356 325 500 8.31e-12 67.4
Msa0768570 AT1G62910.1 26.442 208 145 3 106 309 229 432 1.03e-11 67.0
Msa0768570 AT1G62910.1 23.715 253 175 6 64 311 330 569 1.31e-11 66.6
Msa0768570 AT3G53700.1 23.348 227 166 2 106 332 336 554 1.19e-11 67.0
Msa0768570 AT1G62590.2 26.286 175 124 2 137 311 402 571 1.36e-11 66.6
Msa0768570 AT1G62590.1 26.286 175 124 2 137 311 402 571 1.36e-11 66.6
Msa0768570 AT1G62930.1 25.962 208 146 3 106 309 226 429 1.45e-11 66.6
Msa0768570 AT5G61990.1 23.810 168 121 2 141 305 563 726 1.56e-11 66.6
Msa0768570 AT5G61990.1 23.109 238 171 4 59 292 309 538 3.62e-11 65.5
Msa0768570 AT5G61990.1 25.581 215 153 4 114 325 676 886 5.78e-11 65.1
Msa0768570 AT1G62914.1 24.880 209 149 3 105 309 223 427 1.91e-11 65.9
Msa0768570 AT1G12775.1 23.111 225 165 3 89 309 252 472 3.08e-11 65.5
Msa0768570 AT5G21222.1 22.059 204 153 1 106 303 325 528 3.28e-11 65.5
Msa0768570 AT5G21222.2 22.059 204 153 1 106 303 325 528 3.28e-11 65.5
Msa0768570 AT5G21222.4 22.059 204 153 1 106 303 325 528 3.28e-11 65.5
Msa0768570 AT5G21222.3 22.059 204 153 1 106 303 325 528 3.28e-11 65.5
Msa0768570 AT1G64583.1 26.316 228 159 4 76 296 82 307 3.61e-11 65.1
Msa0768570 AT1G64583.2 26.316 228 159 4 76 296 57 282 3.82e-11 65.1
Msa0768570 AT5G59900.1 24.257 202 146 2 93 291 220 417 3.86e-11 65.5
Msa0768570 AT1G19290.2 20.922 282 207 4 64 342 227 495 5.03e-11 65.1
Msa0768570 AT1G19290.1 20.922 282 207 4 64 342 227 495 5.03e-11 65.1
Msa0768570 AT2G41720.1 20.816 245 186 2 105 349 430 666 7.43e-11 64.3
Msa0768570 AT2G41720.3 20.816 245 186 2 105 349 430 666 7.61e-11 64.3
Msa0768570 AT1G12700.3 22.500 240 178 3 118 357 367 598 7.91e-11 64.3
Msa0768570 AT1G12700.2 22.500 240 178 3 118 357 367 598 7.91e-11 64.3
Msa0768570 AT1G12700.1 22.500 240 178 3 118 357 351 582 7.93e-11 64.3
Msa0768570 AT4G19440.4 24.272 206 155 1 98 303 516 720 8.18e-11 64.3
Msa0768570 AT4G19440.2 24.272 206 155 1 98 303 516 720 8.18e-11 64.3
Msa0768570 AT4G19440.3 24.272 206 155 1 98 303 516 720 8.18e-11 64.3
Msa0768570 AT4G19440.1 24.272 206 155 1 98 303 516 720 8.18e-11 64.3
Msa0768570 AT1G06580.3 21.812 298 208 9 102 389 44 326 8.97e-11 63.5
Msa0768570 AT1G06580.2 21.812 298 208 9 102 389 44 326 8.97e-11 63.5

Find 81 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGAGGCTCTGTGGGTCTT+GGG 0.176003 5_2:-34966523 Msa0768570:CDS
TTGGGAGGCTCTGTGGGTCT+TGG 0.177689 5_2:-34966524 Msa0768570:CDS
TCTTAATAAGGGAAATATTA+AGG 0.178833 5_2:-34966693 Msa0768570:CDS
AGTTAAGGAATATCTTAATA+AGG 0.265323 5_2:-34966705 Msa0768570:CDS
CTTAATAAGGGAAATATTAA+GGG 0.314575 5_2:-34966692 Msa0768570:CDS
AAGAAAGCTGCCATCAATTC+AGG 0.328046 5_2:+34966248 None:intergenic
GAGATGATGACGAGGAAGTT+TGG 0.329671 5_2:-34966757 Msa0768570:CDS
CCGAAACATATCCGTTAATC+AGG 0.334305 5_2:+34966066 None:intergenic
GGTCATTCGGCTCAAATTGC+AGG 0.350988 5_2:+34966102 None:intergenic
GTTGACGAGTCTATAGGTTT+TGG 0.353471 5_2:-34966617 Msa0768570:CDS
TGAAAATATTTGTTGATAAG+TGG 0.364460 5_2:-34965869 Msa0768570:CDS
GGAATGCATCAACCAGATTC+TGG 0.365582 5_2:+34965958 None:intergenic
GATCAAATTTGACCAGAATC+TGG 0.372731 5_2:-34965970 Msa0768570:CDS
AGCTCAAAGTGGCCAGGTTA+AGG 0.380872 5_2:-34965812 Msa0768570:CDS
GACTATAATGACAGGTTTGA+TGG 0.384239 5_2:-34966282 Msa0768570:CDS
TGGTCAAATTTGATCCCCTT+TGG 0.391575 5_2:+34965978 None:intergenic
GACAAGTATGTCTGGTCATT+CGG 0.398593 5_2:+34966089 None:intergenic
CCTGATTAACGGATATGTTT+CGG 0.401301 5_2:-34966066 Msa0768570:CDS
TGTTTCTATCAGAGCATCAT+AGG 0.407915 5_2:+34966394 None:intergenic
TTGAAGTTGGTACTCATGAT+TGG 0.409872 5_2:-34966199 Msa0768570:CDS
GCAAGTTGTGGAGAAATCTA+AGG 0.414876 5_2:-34965895 Msa0768570:CDS
GAGATACAAGCAAGCGTTCA+TGG 0.416295 5_2:-34965847 Msa0768570:CDS
GGGAGGCTCTGTGGGTCTTG+GGG 0.421493 5_2:-34966522 Msa0768570:CDS
GTTAAGGAATATCTTAATAA+GGG 0.424712 5_2:-34966704 Msa0768570:CDS
CTTGATGAGATGAATGCTTT+GGG 0.425114 5_2:-34966542 Msa0768570:CDS
GTGACGGAGATTAGTAGTTC+AGG 0.428125 5_2:-34966437 Msa0768570:CDS
ACATACTTGTCCCTGATTAA+CGG 0.428702 5_2:-34966077 Msa0768570:CDS
TCTTGATGAGATGAATGCTT+TGG 0.429748 5_2:-34966543 Msa0768570:CDS
AACTGCGGAGGCTACTCTAT+TGG 0.438932 5_2:-34966459 Msa0768570:CDS
GTCTGGTGATTTAGTTTCTG+TGG 0.441704 5_2:-34966810 Msa0768570:CDS
GGTCTATGTGCCGATCTTGA+AGG 0.443651 5_2:-34966501 Msa0768570:CDS
TCTTGCATCTTCTAGCCTCC+CGG 0.455695 5_2:+34966148 None:intergenic
ATCAAAGTTGACGAGTCTAT+AGG 0.458638 5_2:-34966623 Msa0768570:CDS
ACGCCGCCCCATGAATGAAA+AGG 0.462031 5_2:+34968112 None:intergenic
AATGCTTTGGGAGGCTCTGT+GGG 0.462220 5_2:-34966530 Msa0768570:CDS
GAGGTTAAGCGAAAGTTAGC+AGG 0.465516 5_2:-34966008 Msa0768570:CDS
GTGAGGGTTCTTGATTTGAA+AGG 0.466860 5_2:-34966314 Msa0768570:CDS
GTGAATGCTTGTGTTAGTAT+TGG 0.469785 5_2:-34966590 Msa0768570:CDS
TTTCTTAGATGAGGTGGTTG+AGG 0.470772 5_2:-34966231 Msa0768570:CDS
TGAGGGTTCTTGATTTGAAA+GGG 0.484547 5_2:-34966313 Msa0768570:CDS
GAATCATCGACCTGAATTGA+TGG 0.484776 5_2:-34966258 Msa0768570:CDS
CGCCGCCCCATGAATGAAAA+GGG 0.493702 5_2:+34968113 None:intergenic
AAAAGCAGGGGCAGCAGTGT+TGG 0.499410 5_2:+34968174 None:intergenic
TTAGCAGGGGATGGGCCAAA+GGG 0.504524 5_2:-34965993 Msa0768570:CDS
TAATCAGGGACAAGTATGTC+TGG 0.515514 5_2:+34966081 None:intergenic
AGCAGGGGCAGCAGTGTTGG+CGG 0.515671 5_2:+34968177 None:intergenic
GTTAGCAGGGGATGGGCCAA+AGG 0.520097 5_2:-34965994 Msa0768570:CDS
AAGCGAAAGTTAGCAGGGGA+TGG 0.520299 5_2:-34966002 Msa0768570:CDS
GGCAGCTTTCTTAGATGAGG+TGG 0.521040 5_2:-34966237 Msa0768570:CDS
GAATGCTTTGGGAGGCTCTG+TGG 0.523683 5_2:-34966531 Msa0768570:CDS
TTGCAGTAAGCCTTCAAGAT+CGG 0.528610 5_2:+34966491 None:intergenic
TAGTAGTTCAGGTCTAAAGT+TGG 0.534004 5_2:-34966426 Msa0768570:CDS
CTCCCTTGACCATAGCATAC+AGG 0.534135 5_2:+34965937 None:intergenic
GAGGATCCTCGTATTGAAGT+TGG 0.536511 5_2:-34966212 Msa0768570:CDS
TGTAATGATGTTGTGGAATG+AGG 0.543482 5_2:-34966027 Msa0768570:CDS
AATGAAAAGGGATAAAGAAA+CGG 0.545981 5_2:+34968125 None:intergenic
TTGAAAGTCTTGACTGGACA+TGG 0.553307 5_2:+34966370 None:intergenic
GTCCAGTCAAGACTTTCAAT+CGG 0.555051 5_2:-34966366 Msa0768570:CDS
GACCGATTGAAAGTCTTGAC+TGG 0.560178 5_2:+34966364 None:intergenic
AGCGAAAGTTAGCAGGGGAT+GGG 0.562936 5_2:-34966001 Msa0768570:CDS
ATTCCTGTATGCTATGGTCA+AGG 0.570553 5_2:-34965940 Msa0768570:CDS
TGATGTTGTTATGCAAGTTG+TGG 0.572321 5_2:-34965907 Msa0768570:CDS
TTAGGGACATGAGAGAGGTG+AGG 0.573800 5_2:-34966331 Msa0768570:CDS
AGTTACTTGACTATAATGAC+AGG 0.574269 5_2:-34966290 Msa0768570:CDS
TGATGCATTCCTGTATGCTA+TGG 0.578318 5_2:-34965946 Msa0768570:CDS
TAGGGACATGAGAGAGGTGA+GGG 0.579092 5_2:-34966330 Msa0768570:CDS
TTCCTGTATGCTATGGTCAA+GGG 0.590606 5_2:-34965939 Msa0768570:CDS
TTCAGGTCTAAAGTTGGACG+TGG 0.606771 5_2:-34966420 Msa0768570:CDS
GATGGCAGCTTTCTTAGATG+AGG 0.607823 5_2:-34966240 Msa0768570:CDS
AGGTTAAGCGAAAGTTAGCA+GGG 0.608905 5_2:-34966007 Msa0768570:CDS
TTTGTTTAGGGACATGAGAG+AGG 0.609794 5_2:-34966336 Msa0768570:CDS
GATGAGATGAATGCTTTGGG+AGG 0.611114 5_2:-34966539 Msa0768570:CDS
CGAAACATATCCGTTAATCA+GGG 0.620823 5_2:+34966067 None:intergenic
GGAGGCTACTCTATTGGTGA+CGG 0.634065 5_2:-34966453 Msa0768570:CDS
CTGTATGCTATGGTCAAGGG+AGG 0.634721 5_2:-34965936 Msa0768570:CDS
CAAAGAGAATCGAACTGCGG+AGG 0.652528 5_2:-34966471 Msa0768570:CDS
TAGCAGGGGATGGGCCAAAG+GGG 0.672922 5_2:-34965992 Msa0768570:CDS
GAATGATAGAGATGATGACG+AGG 0.694815 5_2:-34966765 Msa0768570:CDS
CTGCAAAGAGAATCGAACTG+CGG 0.726664 5_2:-34966474 Msa0768570:CDS
TGAGTACCAACTTCAATACG+AGG 0.734272 5_2:+34966206 None:intergenic
GGTTAAGCGAAAGTTAGCAG+GGG 0.736858 5_2:-34966006 Msa0768570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGAATAAAATACATATTAT+TGG + chr5_2:34965963-34965982 None:intergenic 10.0%
!! TTACAAAATATGAAAATAAA+AGG + chr5_2:34966140-34966159 None:intergenic 10.0%
!!! CATATTTTGTAAAATAAAAA+TGG - chr5_2:34966148-34966167 Msa0768570:CDS 10.0%
!! AACAATCAAAATATAATTAA+TGG - chr5_2:34966449-34966468 Msa0768570:CDS 10.0%
!! AATTTGTGTATATTAAAAAT+AGG - chr5_2:34966482-34966501 Msa0768570:CDS 10.0%
!!! ATAAAAACATTTATTGTTTT+TGG + chr5_2:34967074-34967093 None:intergenic 10.0%
!! ATACGACTTATTTAAATAAA+TGG + chr5_2:34966231-34966250 None:intergenic 15.0%
!! TATACATTCTACTAATAAAA+AGG + chr5_2:34966528-34966547 None:intergenic 15.0%
!!! TTCGGTAATAATTTTTTAAA+GGG + chr5_2:34966625-34966644 None:intergenic 15.0%
!!! TTTTATTCTAATTTGATTAG+TGG - chr5_2:34967088-34967107 Msa0768570:intron 15.0%
!! TAGAAAAAGAAACAAATCAA+GGG + chr5_2:34966103-34966122 None:intergenic 20.0%
!! TTAGAAAAAGAAACAAATCA+AGG + chr5_2:34966104-34966123 None:intergenic 20.0%
!!! CTTATTTAAATAAATGGACT+TGG + chr5_2:34966225-34966244 None:intergenic 20.0%
!!! TACAACATTATTTTTTGTAG+TGG - chr5_2:34966321-34966340 Msa0768570:CDS 20.0%
!!! CTTCGGTAATAATTTTTTAA+AGG + chr5_2:34966626-34966645 None:intergenic 20.0%
!! CTTATTTATATGCACTTAAA+GGG - chr5_2:34966867-34966886 Msa0768570:intron 20.0%
!! TCCTATTTATAAGAGAAATT+CGG - chr5_2:34966910-34966929 Msa0768570:intron 20.0%
!! AATGTATGTGGTTAAAAAAT+TGG + chr5_2:34966961-34966980 None:intergenic 20.0%
!! TCAACAAAAATTAATGTATG+TGG + chr5_2:34966973-34966992 None:intergenic 20.0%
!!! CCTATTTATAAGAGAAATTT+TGG + chr5_2:34966996-34967015 None:intergenic 20.0%
!! CCAAAATTTCTCTTATAAAT+AGG - chr5_2:34966993-34967012 Msa0768570:intron 20.0%
!! AGTTAAGGAATATCTTAATA+AGG - chr5_2:34967225-34967244 Msa0768570:intron 20.0%
!! GTTAAGGAATATCTTAATAA+GGG - chr5_2:34967226-34967245 Msa0768570:intron 20.0%
!! TCTTAATAAGGGAAATATTA+AGG - chr5_2:34967237-34967256 Msa0768570:intron 20.0%
!! CTTAATAAGGGAAATATTAA+GGG - chr5_2:34967238-34967257 Msa0768570:intron 20.0%
!!! TGAAAATATTTGTTGATAAG+TGG - chr5_2:34968061-34968080 Msa0768570:intron 20.0%
! AATGAAAAGGGATAAAGAAA+CGG + chr5_2:34965808-34965827 None:intergenic 25.0%
!!! ATATTATTGGTGCTAGTTTT+AGG + chr5_2:34965950-34965969 None:intergenic 25.0%
!!! ACATTATTTTTTGTAGTGGT+CGG - chr5_2:34966325-34966344 Msa0768570:CDS 25.0%
! GACAATGTATAAAATATGCA+AGG + chr5_2:34966366-34966385 None:intergenic 25.0%
! GCTTATTTATATGCACTTAA+AGG - chr5_2:34966866-34966885 Msa0768570:intron 25.0%
! ATTTCTCTTATAAATAGGAC+CGG + chr5_2:34966998-34967017 None:intergenic 25.0%
! CCTATTTATAAGAGAAATTC+GGG - chr5_2:34966911-34966930 Msa0768570:intron 25.0%
! ATTTCTCTTATAAATAGGAC+CGG - chr5_2:34966998-34967017 Msa0768570:intron 25.0%
!!! CACTTTTTGTTTAGTAGTTA+AGG - chr5_2:34967210-34967229 Msa0768570:intron 25.0%
!!! ATTTTGATGTAATGATGTTG+TGG - chr5_2:34967896-34967915 Msa0768570:intron 25.0%
! GAAAAAGAATGTCAGAAAAA+TGG - chr5_2:34968140-34968159 Msa0768570:CDS 25.0%
!!! GCTTATTGCTTTTAAGAATT+GGG - chr5_2:34968167-34968186 Msa0768570:CDS 25.0%
! TCTTTATCCCTTTTCATTCA+TGG - chr5_2:34965810-34965829 Msa0768570:CDS 30.0%
! CTTTATCCCTTTTCATTCAT+GGG - chr5_2:34965811-34965830 Msa0768570:CDS 30.0%
! TTTATCCCTTTTCATTCATG+GGG - chr5_2:34965812-34965831 Msa0768570:CDS 30.0%
CTCTTCAAAAAGAGGTAAAA+AGG + chr5_2:34965869-34965888 None:intergenic 30.0%
!! TCTTTTTGAAGAGAACTGTA+GGG - chr5_2:34965876-34965895 Msa0768570:CDS 30.0%
! AAGCTTTAGCTCATAATCAT+GGG + chr5_2:34966183-34966202 None:intergenic 30.0%
TATTCTCTTCGTCTCATAAT+AGG - chr5_2:34966248-34966267 Msa0768570:CDS 30.0%
!!! CATTATTTTTTGTAGTGGTC+GGG - chr5_2:34966326-34966345 Msa0768570:CDS 30.0%
TGTATAAAATATGCAAGGTC+CGG + chr5_2:34966361-34966380 None:intergenic 30.0%
AATCCAAAACTAAACTCATC+TGG + chr5_2:34966842-34966861 None:intergenic 30.0%
CCCGAATTTCTCTTATAAAT+AGG + chr5_2:34966914-34966933 None:intergenic 30.0%
TCAACAAAAGTGAATGTATC+TGG - chr5_2:34966934-34966953 Msa0768570:intron 30.0%
GAGTTAAAAGTTTAGATGCT+TGG - chr5_2:34967037-34967056 Msa0768570:intron 30.0%
! AAAGTTTAGATGCTTGGTTT+TGG - chr5_2:34967043-34967062 Msa0768570:intron 30.0%
ATTAGTGGTTATGTTAAGTC+TGG - chr5_2:34967103-34967122 Msa0768570:intron 30.0%
!! AATCGGTCTTTTCTTTGTTT+AGG - chr5_2:34967581-34967600 Msa0768570:intron 30.0%
!! ATCGGTCTTTTCTTTGTTTA+GGG - chr5_2:34967582-34967601 Msa0768570:intron 30.0%
AGTTACTTGACTATAATGAC+AGG - chr5_2:34967640-34967659 Msa0768570:intron 30.0%
! ATGCAAGAAGAACTTTTAGA+AGG - chr5_2:34967797-34967816 Msa0768570:intron 30.0%
!! CGCTTATTGCTTTTAAGAAT+TGG - chr5_2:34968166-34968185 Msa0768570:CDS 30.0%
ATCTGACAAGTGAAAAAGCA+GGG + chr5_2:34965772-34965791 None:intergenic 35.0%
CTACAGTTCTCTTCAAAAAG+AGG + chr5_2:34965877-34965896 None:intergenic 35.0%
!! CTCTTTTTGAAGAGAACTGT+AGG - chr5_2:34965875-34965894 Msa0768570:CDS 35.0%
TGTCTCATCTTTGTTGCTAT+TGG - chr5_2:34966038-34966057 Msa0768570:CDS 35.0%
! GAAGCTTTAGCTCATAATCA+TGG + chr5_2:34966184-34966203 None:intergenic 35.0%
TATAAAATATGCAAGGTCCG+GGG + chr5_2:34966359-34966378 None:intergenic 35.0%
GTATAAAATATGCAAGGTCC+GGG + chr5_2:34966360-34966379 None:intergenic 35.0%
! TGAACTTAACTCAGTTGGTA+TGG + chr5_2:34966388-34966407 None:intergenic 35.0%
!!! GGGTGCAAACTTTTTAACTT+CGG + chr5_2:34966643-34966662 None:intergenic 35.0%
!!! CTGCTGTTTTCATCTTGAAT+CGG - chr5_2:34966766-34966785 Msa0768570:CDS 35.0%
!! AAGCCAGATGAGTTTAGTTT+TGG - chr5_2:34966836-34966855 Msa0768570:intron 35.0%
ATCAAAGTTGACGAGTCTAT+AGG - chr5_2:34967307-34967326 Msa0768570:intron 35.0%
GTGAATGCTTGTGTTAGTAT+TGG - chr5_2:34967340-34967359 Msa0768570:intron 35.0%
TCTTGATGAGATGAATGCTT+TGG - chr5_2:34967387-34967406 Msa0768570:intron 35.0%
CTTGATGAGATGAATGCTTT+GGG - chr5_2:34967388-34967407 Msa0768570:intron 35.0%
! TAGTAGTTCAGGTCTAAAGT+TGG - chr5_2:34967504-34967523 Msa0768570:intron 35.0%
! TGTTTCTATCAGAGCATCAT+AGG + chr5_2:34967539-34967558 None:intergenic 35.0%
! TGAGGGTTCTTGATTTGAAA+GGG - chr5_2:34967617-34967636 Msa0768570:intron 35.0%
GACTATAATGACAGGTTTGA+TGG - chr5_2:34967648-34967667 Msa0768570:intron 35.0%
!! TTGAAGTTGGTACTCATGAT+TGG - chr5_2:34967731-34967750 Msa0768570:intron 35.0%
ACATACTTGTCCCTGATTAA+CGG - chr5_2:34967853-34967872 Msa0768570:intron 35.0%
CGAAACATATCCGTTAATCA+GGG + chr5_2:34967866-34967885 None:intergenic 35.0%
! CCTGATTAACGGATATGTTT+CGG - chr5_2:34967864-34967883 Msa0768570:intron 35.0%
TGTAATGATGTTGTGGAATG+AGG - chr5_2:34967903-34967922 Msa0768570:intron 35.0%
GATCAAATTTGACCAGAATC+TGG - chr5_2:34967960-34967979 Msa0768570:intron 35.0%
TGATGTTGTTATGCAAGTTG+TGG - chr5_2:34968023-34968042 Msa0768570:intron 35.0%
GACACATAAAAAGCTCAAAG+TGG - chr5_2:34968107-34968126 Msa0768570:intron 35.0%
! GACATTCTTTTTCCTTAACC+TGG + chr5_2:34968133-34968152 None:intergenic 35.0%
!! ATTGCTTTTAAGAATTGGGC+TGG - chr5_2:34968171-34968190 Msa0768570:CDS 35.0%
TCTGACAAGTGAAAAAGCAG+GGG + chr5_2:34965771-34965790 None:intergenic 40.0%
GATCTGACAAGTGAAAAAGC+AGG + chr5_2:34965773-34965792 None:intergenic 40.0%
AAAGAGGTAAAAAGGCAGCA+AGG + chr5_2:34965861-34965880 None:intergenic 40.0%
!! TTTTGAAGAGAACTGTAGGG+AGG - chr5_2:34965879-34965898 Msa0768570:CDS 40.0%
!!! GTGCTAGTTTTAGGAACTCA+GGG + chr5_2:34965941-34965960 None:intergenic 40.0%
GGTGCAACAGCAAAATTTCA+GGG + chr5_2:34965994-34966013 None:intergenic 40.0%
TGGTGCAACAGCAAAATTTC+AGG + chr5_2:34965995-34966014 None:intergenic 40.0%
ATGAGACAAGACAGGTCTTT+GGG + chr5_2:34966026-34966045 None:intergenic 40.0%
CAACAAAGATGAGACAAGAC+AGG + chr5_2:34966034-34966053 None:intergenic 40.0%
!! AATAAATGGACTTGGTGCAG+TGG + chr5_2:34966217-34966236 None:intergenic 40.0%
CCTCATGAACTTAACTCAGT+TGG + chr5_2:34966393-34966412 None:intergenic 40.0%
CCAACTGAGTTAAGTTCATG+AGG - chr5_2:34966390-34966409 Msa0768570:CDS 40.0%
CGATTCAAGATGAAAACAGC+AGG + chr5_2:34966768-34966787 None:intergenic 40.0%
GTTGGAATTATGTCCAAGCT+TGG - chr5_2:34966809-34966828 Msa0768570:CDS 40.0%
CTCTTATAAATAGGACCGGA+GGG + chr5_2:34967002-34967021 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG + chr5_2:34967001-34967020 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr5_2:34967001-34967020 Msa0768570:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr5_2:34967002-34967021 Msa0768570:intron 40.0%
! GTCTGGTGATTTAGTTTCTG+TGG - chr5_2:34967120-34967139 Msa0768570:intron 40.0%
! GAATGATAGAGATGATGACG+AGG - chr5_2:34967165-34967184 Msa0768570:intron 40.0%
! GTTGACGAGTCTATAGGTTT+TGG - chr5_2:34967313-34967332 Msa0768570:intron 40.0%
TTGCAGTAAGCCTTCAAGAT+CGG + chr5_2:34967442-34967461 None:intergenic 40.0%
TTGAAAGTCTTGACTGGACA+TGG + chr5_2:34967563-34967582 None:intergenic 40.0%
GTCCAGTCAAGACTTTCAAT+CGG - chr5_2:34967564-34967583 Msa0768570:intron 40.0%
TTTGTTTAGGGACATGAGAG+AGG - chr5_2:34967594-34967613 Msa0768570:intron 40.0%
! GTGAGGGTTCTTGATTTGAA+AGG - chr5_2:34967616-34967635 Msa0768570:intron 40.0%
GAATCATCGACCTGAATTGA+TGG - chr5_2:34967672-34967691 Msa0768570:intron 40.0%
AAGAAAGCTGCCATCAATTC+AGG + chr5_2:34967685-34967704 None:intergenic 40.0%
TTTCTTAGATGAGGTGGTTG+AGG - chr5_2:34967699-34967718 Msa0768570:intron 40.0%
TGAGTACCAACTTCAATACG+AGG + chr5_2:34967727-34967746 None:intergenic 40.0%
!! ATCCACGCTTTTTGTAAAGC+CGG - chr5_2:34967763-34967782 Msa0768570:intron 40.0%
GACAAGTATGTCTGGTCATT+CGG + chr5_2:34967844-34967863 None:intergenic 40.0%
TAATCAGGGACAAGTATGTC+TGG + chr5_2:34967852-34967871 None:intergenic 40.0%
CCGAAACATATCCGTTAATC+AGG + chr5_2:34967867-34967886 None:intergenic 40.0%
AGGTTAAGCGAAAGTTAGCA+GGG - chr5_2:34967923-34967942 Msa0768570:intron 40.0%
TGGTCAAATTTGATCCCCTT+TGG + chr5_2:34967955-34967974 None:intergenic 40.0%
TGATGCATTCCTGTATGCTA+TGG - chr5_2:34967984-34968003 Msa0768570:intron 40.0%
ATTCCTGTATGCTATGGTCA+AGG - chr5_2:34967990-34968009 Msa0768570:intron 40.0%
TTCCTGTATGCTATGGTCAA+GGG - chr5_2:34967991-34968010 Msa0768570:intron 40.0%
GCAAGTTGTGGAGAAATCTA+AGG - chr5_2:34968035-34968054 Msa0768570:intron 40.0%
ATAAAAAGCTCAAAGTGGCC+AGG - chr5_2:34968112-34968131 Msa0768570:CDS 40.0%
! ATCCCTTTTCATTCATGGGG+CGG - chr5_2:34965815-34965834 Msa0768570:CDS 45.0%
!!! GGTGCTAGTTTTAGGAACTC+AGG + chr5_2:34965942-34965961 None:intergenic 45.0%
GATGAGACAAGACAGGTCTT+TGG + chr5_2:34966027-34966046 None:intergenic 45.0%
AGTGGCATCAACTCAGTTTG+TGG + chr5_2:34966073-34966092 None:intergenic 45.0%
TCCAAAGCAACCCTACACAA+TGG + chr5_2:34966689-34966708 None:intergenic 45.0%
GCATTACAAGCAGCAACATC+AGG + chr5_2:34966734-34966753 None:intergenic 45.0%
AATCGGTAACTGATGCTGAC+AGG - chr5_2:34966783-34966802 Msa0768570:CDS 45.0%
ATCGGTAACTGATGCTGACA+GGG - chr5_2:34966784-34966803 Msa0768570:CDS 45.0%
! ATCTGGCTTAACACCAAGCT+TGG + chr5_2:34966825-34966844 None:intergenic 45.0%
! GAGATGATGACGAGGAAGTT+TGG - chr5_2:34967173-34967192 Msa0768570:intron 45.0%
! GATGAGATGAATGCTTTGGG+AGG - chr5_2:34967391-34967410 Msa0768570:intron 45.0%
CTGCAAAGAGAATCGAACTG+CGG - chr5_2:34967456-34967475 Msa0768570:intron 45.0%
! GTGACGGAGATTAGTAGTTC+AGG - chr5_2:34967493-34967512 Msa0768570:intron 45.0%
! TTCAGGTCTAAAGTTGGACG+TGG - chr5_2:34967510-34967529 Msa0768570:intron 45.0%
GACCGATTGAAAGTCTTGAC+TGG + chr5_2:34967569-34967588 None:intergenic 45.0%
GATGGCAGCTTTCTTAGATG+AGG - chr5_2:34967690-34967709 Msa0768570:intron 45.0%
GAGGATCCTCGTATTGAAGT+TGG - chr5_2:34967718-34967737 Msa0768570:intron 45.0%
!! TCCACGCTTTTTGTAAAGCC+GGG - chr5_2:34967764-34967783 Msa0768570:intron 45.0%
GAGGTTAAGCGAAAGTTAGC+AGG - chr5_2:34967922-34967941 Msa0768570:intron 45.0%
GGTTAAGCGAAAGTTAGCAG+GGG - chr5_2:34967924-34967943 Msa0768570:intron 45.0%
GGAATGCATCAACCAGATTC+TGG + chr5_2:34967975-34967994 None:intergenic 45.0%
GAGATACAAGCAAGCGTTCA+TGG - chr5_2:34968083-34968102 Msa0768570:intron 45.0%
TGAAGAGAACTGTAGGGAGG+CGG - chr5_2:34965882-34965901 Msa0768570:CDS 50.0%
CAGGTCTTTGGGTGAGAACT+TGG + chr5_2:34966015-34966034 None:intergenic 50.0%
CAAATCAAGGGTCACGTCAG+TGG + chr5_2:34966091-34966110 None:intergenic 50.0%
AGTGGTCGGGATTTAAACCC+CGG - chr5_2:34966339-34966358 Msa0768570:CDS 50.0%
TCCTGGATACGCCATTGTGT+AGG - chr5_2:34966675-34966694 Msa0768570:CDS 50.0%
CCTGGATACGCCATTGTGTA+GGG - chr5_2:34966676-34966695 Msa0768570:CDS 50.0%
GCCATTGTGTAGGGTTGCTT+TGG - chr5_2:34966685-34966704 Msa0768570:CDS 50.0%
! GGTTGCTTTGGATGAGAAGC+TGG - chr5_2:34966697-34966716 Msa0768570:CDS 50.0%
ACTGATGCTGACAGGGTTGT+TGG - chr5_2:34966791-34966810 Msa0768570:CDS 50.0%
GGGTTACAAGATACTCCCTC+CGG - chr5_2:34966887-34966906 Msa0768570:intron 50.0%
CTCGTCTATCTTACTCCCTC+CGG + chr5_2:34967020-34967039 None:intergenic 50.0%
!! AATGCTTTGGGAGGCTCTGT+GGG - chr5_2:34967400-34967419 Msa0768570:intron 50.0%
! GGTCTATGTGCCGATCTTGA+AGG - chr5_2:34967429-34967448 Msa0768570:intron 50.0%
CAAAGAGAATCGAACTGCGG+AGG - chr5_2:34967459-34967478 Msa0768570:intron 50.0%
AACTGCGGAGGCTACTCTAT+TGG - chr5_2:34967471-34967490 Msa0768570:intron 50.0%
GGAGGCTACTCTATTGGTGA+CGG - chr5_2:34967477-34967496 Msa0768570:intron 50.0%
TTAGGGACATGAGAGAGGTG+AGG - chr5_2:34967599-34967618 Msa0768570:intron 50.0%
TAGGGACATGAGAGAGGTGA+GGG - chr5_2:34967600-34967619 Msa0768570:intron 50.0%
GGCAGCTTTCTTAGATGAGG+TGG - chr5_2:34967693-34967712 Msa0768570:intron 50.0%
TCCCGGCTTTACAAAAAGCG+TGG + chr5_2:34967768-34967787 None:intergenic 50.0%
!! ACGCTTTTTGTAAAGCCGGG+AGG - chr5_2:34967767-34967786 Msa0768570:intron 50.0%
TCTTGCATCTTCTAGCCTCC+CGG + chr5_2:34967785-34967804 None:intergenic 50.0%
GGTCATTCGGCTCAAATTGC+AGG + chr5_2:34967831-34967850 None:intergenic 50.0%
AAGCGAAAGTTAGCAGGGGA+TGG - chr5_2:34967928-34967947 Msa0768570:intron 50.0%
AGCGAAAGTTAGCAGGGGAT+GGG - chr5_2:34967929-34967948 Msa0768570:intron 50.0%
CTCCCTTGACCATAGCATAC+AGG + chr5_2:34967996-34968015 None:intergenic 50.0%
CTGTATGCTATGGTCAAGGG+AGG - chr5_2:34967994-34968013 Msa0768570:intron 50.0%
AGCTCAAAGTGGCCAGGTTA+AGG - chr5_2:34968118-34968137 Msa0768570:CDS 50.0%
AAAAGCAGGGGCAGCAGTGT+TGG + chr5_2:34965759-34965778 None:intergenic 55.0%
CGCCGCCCCATGAATGAAAA+GGG + chr5_2:34965820-34965839 None:intergenic 55.0%
ACGCCGCCCCATGAATGAAA+AGG + chr5_2:34965821-34965840 None:intergenic 55.0%
AAGTTTGCACCCCCTCACTC+AGG - chr5_2:34966651-34966670 Msa0768570:CDS 55.0%
AGTTTGCACCCCCTCACTCA+GGG - chr5_2:34966652-34966671 Msa0768570:CDS 55.0%
TATCCAGGACCCTGAGTGAG+GGG + chr5_2:34966664-34966683 None:intergenic 55.0%
GTATCCAGGACCCTGAGTGA+GGG + chr5_2:34966665-34966684 None:intergenic 55.0%
CCCTACACAATGGCGTATCC+AGG + chr5_2:34966679-34966698 None:intergenic 55.0%
!! GAATGCTTTGGGAGGCTCTG+TGG - chr5_2:34967399-34967418 Msa0768570:intron 55.0%
TTAGCAGGGGATGGGCCAAA+GGG - chr5_2:34967937-34967956 Msa0768570:intron 55.0%
TGCTCACCCTCAGATGCAGC+TGG + chr5_2:34965910-34965929 None:intergenic 60.0%
ATCCAGGACCCTGAGTGAGG+GGG + chr5_2:34966663-34966682 None:intergenic 60.0%
CGTATCCAGGACCCTGAGTG+AGG + chr5_2:34966666-34966685 None:intergenic 60.0%
TTGGGAGGCTCTGTGGGTCT+TGG - chr5_2:34967406-34967425 Msa0768570:intron 60.0%
TGGGAGGCTCTGTGGGTCTT+GGG - chr5_2:34967407-34967426 Msa0768570:intron 60.0%
GTTAGCAGGGGATGGGCCAA+AGG - chr5_2:34967936-34967955 Msa0768570:intron 60.0%
TAGCAGGGGATGGGCCAAAG+GGG - chr5_2:34967938-34967957 Msa0768570:intron 60.0%
! AGCAGGGGCAGCAGTGTTGG+CGG + chr5_2:34965756-34965775 None:intergenic 65.0%
GCGGAGCCAGCTGCATCTGA+GGG - chr5_2:34965901-34965920 Msa0768570:CDS 65.0%
GGGAGGCTCTGTGGGTCTTG+GGG - chr5_2:34967408-34967427 Msa0768570:intron 65.0%
GGCGGAGCCAGCTGCATCTG+AGG - chr5_2:34965900-34965919 Msa0768570:CDS 70.0%
CACCCCCTCACTCAGGGTCC+TGG - chr5_2:34966658-34966677 Msa0768570:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 34965746 34968206 34965746 ID=Msa0768570;Name=Msa0768570
chr5_2 mRNA 34965746 34968206 34965746 ID=Msa0768570-mRNA-1;Parent=Msa0768570;Name=Msa0768570-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|0|0|2|0|394
chr5_2 exon 34968108 34968206 34968108 ID=Msa0768570-mRNA-1:exon:11981;Parent=Msa0768570-mRNA-1
chr5_2 exon 34965746 34966831 34965746 ID=Msa0768570-mRNA-1:exon:11980;Parent=Msa0768570-mRNA-1
chr5_2 CDS 34968108 34968206 34968108 ID=Msa0768570-mRNA-1:cds;Parent=Msa0768570-mRNA-1
chr5_2 CDS 34965746 34966831 34965746 ID=Msa0768570-mRNA-1:cds;Parent=Msa0768570-mRNA-1
Gene Sequence

>Msa0768570

ATGAAATCCGCCAACACTGCTGCCCCTGCTTTTTCACTTGTCAGATCAATGTTCAATAACCGTTTCTTTATCCCTTTTCATTCATGGGGCGGCGTGCTCTCTGGTGATTTAGTTTCTGTGGAGTCGACTATTCTTAGTAGTTTGAATGATAGAGATGATGACGAGGAAGTTTGGAATTTCGATAGAGACACTTTTTGTTTAGTAGTTAAGGAATATCTTAATAAGGGAAATATTAAGGGTTTAGCTAATTTGATTATCGAAGCTCAAAAATTAGAGTCTTTGAATATCAAAGTTGACGAGTCTATAGGTTTTGGTATTGTGAATGCTTGTGTTAGTATTGGATTATCAGACAAAGCACACAGTATTCTTGATGAGATGAATGCTTTGGGAGGCTCTGTGGGTCTTGGGGTCTATGTGCCGATCTTGAAGGCTTACTGCAAAGAGAATCGAACTGCGGAGGCTACTCTATTGGTGACGGAGATTAGTAGTTCAGGTCTAAAGTTGGACGTGGAAACCTATGATGCTCTGATAGAAACATCCATGTCCAGTCAAGACTTTCAATCGGTCTTTTCTTTGTTTAGGGACATGAGAGAGGTGAGGGTTCTTGATTTGAAAGGGAGTTACTTGACTATAATGACAGGTTTGATGGAGAATCATCGACCTGAATTGATGGCAGCTTTCTTAGATGAGGTGGTTGAGGATCCTCGTATTGAAGTTGGTACTCATGATTGGAATTCTATAATCCACGCTTTTTGTAAAGCCGGGAGGCTAGAAGATGCAAGAAGAACTTTTAGAAGGATGACATTCCTGCAATTTGAGCCGAATGACCAGACATACTTGTCCCTGATTAACGGATATGTTTCGGCAGAAAAATATTTTGATGTAATGATGTTGTGGAATGAGGTTAAGCGAAAGTTAGCAGGGGATGGGCCAAAGGGGATCAAATTTGACCAGAATCTGGTTGATGCATTCCTGTATGCTATGGTCAAGGGAGGTTTCTTTGATGTTGTTATGCAAGTTGTGGAGAAATCTAAGGAGATGAAAATATTTGTTGATAAGTGGAGATACAAGCAAGCGTTCATGGAGACACATAAAAAGCTCAAAGTGGCCAGGTTAAGGAAAAAGAATGTCAGAAAAATGGAAGCGCTTATTGCTTTTAAGAATTGGGCTGGCTTAAATGCATGA
Protein sequence

>Msa0768570

MKSANTAAPAFSLVRSMFNNRFFIPFHSWGGVLSGDLVSVESTILSSLNDRDDDEEVWNFDRDTFCLVVKEYLNKGNIKGLANLIIEAQKLESLNIKVDESIGFGIVNACVSIGLSDKAHSILDEMNALGGSVGLGVYVPILKAYCKENRTAEATLLVTEISSSGLKLDVETYDALIETSMSSQDFQSVFSLFRDMREVRVLDLKGSYLTIMTGLMENHRPELMAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLINGYVSAEKYFDVMMLWNEVKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDVVMQVVEKSKEMKIFVDKWRYKQAFMETHKKLKVARLRKKNVRKMEALIAFKNWAGLNA*