AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1065610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1065610 MtrunA17_Chr7g0246111 93.307 508 4 4 1 480 1 506 0.0 944
Msa1065610 MtrunA17_Chr6g0459561 48.495 299 143 5 191 479 362 659 8.99e-96 303
Msa1065610 MtrunA17_Chr6g0459541 44.720 322 134 6 197 479 28 344 8.49e-91 280
Msa1065610 MtrunA17_Chr4g0026631 43.168 322 145 4 194 478 110 430 5.50e-80 255
Msa1065610 MtrunA17_Chr2g0321241 42.991 321 145 4 195 478 116 435 5.75e-80 255
Msa1065610 MtrunA17_Chr6g0459551 39.200 375 170 10 145 477 44 402 2.99e-79 253
Msa1065610 MtrunA17_Chr4g0004121 38.320 381 209 7 119 479 154 528 3.58e-77 251
Msa1065610 MtrunA17_Chr4g0052271 51.012 247 117 3 196 440 104 348 1.10e-76 245
Msa1065610 MtrunA17_Chr4g0038101 44.326 282 142 5 211 478 721 1001 6.58e-71 243
Msa1065610 MtrunA17_Chr6g0459531 40.753 292 137 4 197 479 53 317 4.81e-70 226
Msa1065610 MtrunA17_Chr5g0397121 42.532 308 131 8 211 478 513 814 6.16e-70 238
Msa1065610 MtrunA17_Chr6g0462581 41.391 302 141 6 211 478 500 799 4.77e-67 230
Msa1065610 MtrunA17_Chr3g0127401 41.042 307 163 6 161 459 40 336 4.89e-66 217
Msa1065610 MtrunA17_Chr8g0387641 39.812 319 135 7 211 478 521 833 1.10e-65 226
Msa1065610 MtrunA17_Chr1g0195731 42.321 293 143 6 211 478 934 1225 1.55e-65 229
Msa1065610 MtrunA17_Chr1g0195741 41.638 293 145 6 211 478 938 1229 1.31e-64 226
Msa1065610 MtrunA17_Chr3g0127431 41.727 278 150 5 161 436 43 310 3.57e-64 213
Msa1065610 MtrunA17_Chr1g0202371 38.816 304 148 4 211 478 397 698 1.37e-62 216
Msa1065610 MtrunA17_Chr3g0116131 42.373 295 140 6 211 478 902 1193 2.36e-62 219
Msa1065610 MtrunA17_Chr1g0202381 41.463 287 148 6 162 436 416 694 1.10e-61 214
Msa1065610 MtrunA17_Chr1g0204031 48.035 229 114 3 211 436 557 783 7.95e-61 213
Msa1065610 MtrunA17_Chr1g0192151 35.294 289 161 8 183 455 130 408 4.56e-49 173
Msa1065610 MtrunA17_Chr4g0014731 35.294 289 161 8 183 455 131 409 5.73e-49 173
Msa1065610 MtrunA17_Chr7g0255721 39.464 261 140 8 209 461 683 933 1.68e-48 179
Msa1065610 MtrunA17_Chr7g0255721 33.032 221 143 3 216 434 391 608 1.06e-25 111
Msa1065610 MtrunA17_Chr1g0180791 39.630 270 146 5 206 461 200 466 6.43e-48 176
Msa1065610 MtrunA17_Chr1g0180791 38.627 233 134 5 209 435 476 705 2.24e-46 172
Msa1065610 MtrunA17_Chr3g0145011 37.770 278 153 8 210 480 138 402 2.86e-47 168
Msa1065610 MtrunA17_Chr7g0264521 39.259 270 147 5 206 461 201 467 4.98e-47 174
Msa1065610 MtrunA17_Chr7g0264521 39.056 233 133 5 209 435 477 706 1.32e-46 172
Msa1065610 MtrunA17_Chr2g0327121 38.627 233 134 5 209 435 478 707 4.27e-46 171
Msa1065610 MtrunA17_Chr2g0327121 42.308 234 127 5 206 435 202 431 2.54e-44 166
Msa1065610 MtrunA17_Chr3g0141901 37.681 276 152 8 210 478 135 397 5.45e-46 164
Msa1065610 MtrunA17_Chr4g0050561 36.397 272 153 8 194 456 139 399 2.37e-45 163
Msa1065610 MtrunA17_Chr7g0255641 37.453 267 145 8 209 465 656 910 4.18e-44 166
Msa1065610 MtrunA17_Chr7g0255641 32.609 276 163 7 212 470 394 663 3.49e-29 121
Msa1065610 MtrunA17_Chr7g0262801 35.878 262 153 6 199 454 175 427 7.15e-42 154
Msa1065610 MtrunA17_Chr1g0182711 35.496 262 154 6 199 454 176 428 7.98e-42 154
Msa1065610 MtrunA17_Chr7g0255901 32.143 336 193 10 160 477 601 919 2.05e-41 158
Msa1065610 MtrunA17_Chr2g0277831 35.870 276 162 6 209 472 531 803 4.27e-41 157
Msa1065610 MtrunA17_Chr2g0277831 29.568 301 162 9 213 470 245 538 1.18e-29 123
Msa1065610 MtrunA17_Chr4g0033451 34.672 274 159 6 210 465 379 650 3.82e-38 149
Msa1065610 MtrunA17_Chr3g0108321 40.104 192 107 4 209 394 157 346 7.42e-37 139
Msa1065610 MtrunA17_Chr8g0345461 33.884 242 149 6 200 434 154 391 1.39e-36 139
Msa1065610 MtrunA17_Chr2g0316851 35.652 230 138 4 213 434 596 823 6.27e-36 142
Msa1065610 MtrunA17_Chr3g0086411 35.106 282 152 10 209 464 213 489 6.43e-36 139
Msa1065610 MtrunA17_Chr3g0086411 29.075 227 117 7 298 480 7 233 5.80e-16 80.1
Msa1065610 MtrunA17_Chr3g0135721 36.047 258 151 8 210 461 223 472 1.60e-35 140
Msa1065610 MtrunA17_Chr5g0432631 34.201 269 162 8 200 461 217 477 1.89e-35 140
Msa1065610 MtrunA17_Chr8g0362771 37.445 227 130 8 210 430 236 456 4.61e-35 139
Msa1065610 MtrunA17_Chr7g0255651 36.052 233 140 5 209 435 280 509 5.04e-35 137
Msa1065610 MtrunA17_Chr7g0255651 29.348 276 170 9 218 478 24 289 6.96e-16 80.1
Msa1065610 MtrunA17_Chr1g0200081 33.884 242 148 7 200 434 164 400 2.23e-34 134
Msa1065610 MtrunA17_Chr7g0255691 32.595 316 199 8 154 462 228 536 4.91e-34 134
Msa1065610 MtrunA17_Chr7g0255691 33.803 284 159 11 214 478 20 293 1.77e-27 115
Msa1065610 MtrunA17_Chr4g0043381 33.829 269 162 6 190 447 810 1073 5.26e-34 136
Msa1065610 MtrunA17_Chr4g0043381 27.037 270 170 11 216 460 554 821 7.95e-12 67.8
Msa1065610 MtrunA17_Chr4g0052411 36.797 231 136 6 210 434 228 454 9.53e-34 135
Msa1065610 MtrunA17_Chr2g0297281 36.797 231 136 6 210 434 285 511 2.48e-33 134
Msa1065610 MtrunA17_Chr7g0217421 36.364 231 137 6 210 434 38 264 2.81e-33 130
Msa1065610 MtrunA17_Chr6g0456351 36.207 232 141 5 207 434 313 541 3.37e-33 132
Msa1065610 MtrunA17_Chr2g0327231 36.649 191 115 3 187 373 322 510 6.06e-33 130
Msa1065610 MtrunA17_Chr2g0327231 36.585 123 69 3 206 327 148 262 3.53e-15 77.8
Msa1065610 MtrunA17_Chr3g0143721 36.364 231 137 6 210 434 248 474 6.63e-33 132
Msa1065610 MtrunA17_Chr3g0135761 34.766 256 153 8 212 461 223 470 1.38e-32 131
Msa1065610 MtrunA17_Chr6g0476861 35.565 239 139 7 206 434 192 425 5.58e-32 129
Msa1065610 MtrunA17_Chr7g0260601 35.146 239 140 7 206 434 235 468 1.27e-31 128
Msa1065610 MtrunA17_Chr3g0086401 30.303 297 174 7 209 477 383 674 2.25e-31 127
Msa1065610 MtrunA17_Chr3g0086401 31.159 276 144 8 245 477 128 400 1.87e-26 113
Msa1065610 MtrunA17_Chr3g0104211 35.565 239 141 7 206 435 299 533 7.65e-31 126
Msa1065610 MtrunA17_Chr7g0248361 35.294 238 131 8 211 434 192 420 1.42e-30 125
Msa1065610 MtrunA17_Chr4g0031821 35.043 234 137 7 211 434 320 548 3.33e-30 124
Msa1065610 MtrunA17_Chr5g0429571 29.738 343 193 9 137 435 204 542 4.64e-30 124
Msa1065610 MtrunA17_Chr2g0331161 31.522 276 171 7 205 470 409 676 3.50e-29 121
Msa1065610 MtrunA17_Chr2g0289231 29.703 303 191 8 140 428 224 518 9.08e-29 119
Msa1065610 MtrunA17_Chr1g0158881 33.992 253 158 7 213 462 331 577 1.13e-28 120
Msa1065610 MtrunA17_Chr8g0388371 33.465 254 149 7 203 441 396 644 1.87e-28 119
Msa1065610 MtrunA17_Chr5g0432641 33.929 224 141 5 210 430 190 409 1.97e-28 119
Msa1065610 MtrunA17_Chr3g0094871 33.761 234 141 7 210 434 10 238 7.07e-28 115
Msa1065610 MtrunA17_Chr3g0129971 36.864 236 137 7 210 435 295 528 2.93e-27 115
Msa1065610 MtrunA17_Chr3g0135781 39.264 163 93 4 210 370 54 212 3.27e-27 108
Msa1065610 MtrunA17_Chr4g0047411 32.157 255 141 11 245 473 211 459 1.14e-22 101
Msa1065610 MtrunA17_Chr8g0357301 33.838 198 117 7 247 434 506 699 4.10e-19 90.9
Msa1065610 MtrunA17_Chr5g0432391 33.103 145 92 3 288 430 81 222 1.69e-14 75.5
Msa1065610 MtrunA17_Chr4g0062081 43.590 78 42 2 215 290 11 88 9.63e-14 67.0
Msa1065610 MtrunA17_Chr5g0404291 28.358 201 119 4 246 424 387 584 9.79e-14 73.6
Msa1065610 MtrunA17_Chr4g0039781 32.192 146 96 2 246 391 368 510 1.12e-12 70.1
Msa1065610 MtrunA17_Chr6g0450161 32.653 147 94 3 246 391 362 504 1.57e-12 69.7
Msa1065610 MtrunA17_Chr1g0190401 26.702 191 130 6 207 390 673 860 2.20e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1065610 AT2G45500.1 71.053 494 126 5 1 480 1 491 0.0 679
Msa1065610 AT2G45500.5 71.197 493 123 6 1 480 11 497 0.0 672
Msa1065610 AT2G45500.2 71.197 493 123 6 1 480 1 487 0.0 672
Msa1065610 AT2G45500.4 83.607 305 45 1 181 480 50 354 0.0 527
Msa1065610 AT2G45500.3 83.607 305 45 1 181 480 50 354 0.0 527
Msa1065610 AT3G27120.1 50.502 299 137 6 191 479 380 677 1.48e-96 306
Msa1065610 AT2G27600.1 43.168 322 145 4 194 478 112 432 8.84e-80 255
Msa1065610 AT1G80350.1 44.013 309 153 5 190 479 215 522 1.51e-78 254
Msa1065610 AT2G34560.1 43.478 299 151 5 196 479 85 380 7.31e-75 241
Msa1065610 AT2G34560.2 43.478 299 151 5 196 479 94 389 8.49e-75 241
Msa1065610 AT1G50140.2 43.038 316 158 8 181 478 658 969 1.85e-71 244
Msa1065610 AT1G50140.5 43.038 316 158 8 181 478 658 969 1.85e-71 244
Msa1065610 AT1G50140.3 43.038 316 158 8 181 478 680 991 1.98e-71 244
Msa1065610 AT1G50140.1 43.038 316 158 8 181 478 680 991 1.98e-71 244
Msa1065610 AT1G50140.4 43.038 316 158 8 181 478 680 991 1.98e-71 244
Msa1065610 AT3G19740.1 42.089 316 161 8 181 478 670 981 1.19e-70 242
Msa1065610 AT4G27680.1 41.275 298 161 5 167 456 42 333 2.60e-68 224
Msa1065610 AT1G64110.2 41.967 305 135 8 210 478 517 815 8.64e-68 232
Msa1065610 AT1G64110.4 41.967 305 135 8 210 478 517 815 8.64e-68 232
Msa1065610 AT1G64110.1 41.967 305 135 8 210 478 512 810 9.45e-68 232
Msa1065610 AT1G64110.5 41.967 305 135 8 210 478 515 813 9.71e-68 232
Msa1065610 AT1G64110.3 41.967 305 135 8 210 478 515 813 9.71e-68 232
Msa1065610 AT5G53540.1 40.604 298 163 5 167 456 45 336 1.95e-66 219
Msa1065610 AT4G02480.1 42.662 293 142 5 211 478 960 1251 2.36e-66 232
Msa1065610 AT4G28000.2 40.461 304 143 6 211 478 517 818 4.63e-66 228
Msa1065610 AT4G28000.1 40.461 304 143 6 211 478 515 816 4.66e-66 228
Msa1065610 AT5G52882.1 40.132 304 144 5 211 478 514 815 7.48e-66 227
Msa1065610 AT4G28000.3 47.368 228 116 3 211 436 517 742 2.16e-65 225
Msa1065610 AT4G24860.4 46.888 241 124 3 199 436 778 1017 9.75e-65 226
Msa1065610 AT4G24860.2 46.888 241 124 3 199 436 801 1040 1.01e-64 226
Msa1065610 AT4G24860.1 46.888 241 124 3 199 436 805 1044 1.11e-64 226
Msa1065610 AT4G24860.3 46.888 241 124 3 199 436 803 1042 1.17e-64 226
Msa1065610 AT1G02890.1 42.321 293 143 5 211 478 941 1232 1.12e-63 224
Msa1065610 AT1G62130.2 37.329 292 147 6 211 478 743 1022 6.12e-50 184
Msa1065610 AT1G62130.1 37.201 293 148 6 210 478 749 1029 6.36e-50 184
Msa1065610 AT3G56690.1 39.502 281 150 8 190 461 700 969 9.36e-49 180
Msa1065610 AT3G56690.1 35.747 221 138 2 216 434 387 605 2.33e-34 137
Msa1065610 AT3G05530.1 35.052 291 163 8 181 455 129 409 3.15e-48 172
Msa1065610 AT1G09100.1 34.948 289 162 8 183 455 130 408 7.90e-48 171
Msa1065610 AT1G02890.2 37.201 293 130 6 211 478 941 1204 2.13e-47 176
Msa1065610 AT5G43010.1 37.770 278 149 9 210 478 135 397 1.69e-46 166
Msa1065610 AT3G09840.1 37.762 286 159 6 206 475 199 481 1.90e-46 172
Msa1065610 AT3G09840.1 39.316 234 132 5 209 435 475 705 2.66e-44 166
Msa1065610 AT5G03340.1 38.889 270 148 5 206 461 199 465 3.03e-46 172
Msa1065610 AT5G03340.1 39.485 233 132 5 209 435 475 704 1.96e-45 170
Msa1065610 AT1G45000.1 37.681 276 152 8 210 478 135 397 3.23e-46 166
Msa1065610 AT3G53230.1 42.060 233 129 4 206 435 200 429 5.23e-46 171
Msa1065610 AT3G53230.1 39.056 233 133 5 209 435 476 705 4.21e-45 169
Msa1065610 AT5G20000.1 36.765 272 152 8 194 456 141 401 1.50e-44 162
Msa1065610 AT5G19990.1 36.765 272 152 8 194 456 141 401 1.54e-44 161
Msa1065610 AT5G19990.3 36.765 272 152 8 194 456 141 401 1.54e-44 161
Msa1065610 AT5G19990.2 36.765 272 152 8 194 456 83 343 1.93e-44 160
Msa1065610 AT1G03000.1 35.417 288 163 6 209 477 653 936 3.47e-43 164
Msa1065610 AT4G29040.1 36.641 262 151 6 199 454 173 425 4.66e-43 158
Msa1065610 AT2G20140.1 36.641 262 151 6 199 454 173 425 8.85e-43 157
Msa1065610 AT3G01610.1 36.900 271 154 7 209 466 523 789 6.10e-42 160
Msa1065610 AT3G01610.1 32.500 240 140 5 213 436 232 465 2.98e-28 119
Msa1065610 AT3G01610.2 36.900 271 154 7 209 466 523 789 7.20e-42 159
Msa1065610 AT3G01610.2 32.500 240 140 5 213 436 232 465 3.27e-28 119
Msa1065610 AT5G58290.1 37.768 233 136 5 209 435 150 379 3.16e-41 152
Msa1065610 AT3G15120.1 36.245 229 136 4 213 433 718 944 1.05e-37 148
Msa1065610 AT3G15120.2 36.245 229 136 4 213 433 728 954 1.06e-37 148
Msa1065610 AT2G03670.1 34.752 282 167 8 200 474 272 543 1.83e-36 142
Msa1065610 AT2G03670.1 35.842 279 153 11 215 478 23 290 2.35e-34 136
Msa1065610 AT1G05910.1 34.307 274 156 8 211 464 378 647 3.29e-36 143
Msa1065610 AT1G53750.1 33.884 242 149 6 200 434 154 391 3.46e-36 139
Msa1065610 AT3G02450.1 37.190 242 137 7 207 440 327 561 2.38e-35 139
Msa1065610 AT2G03670.2 35.842 279 153 11 215 478 23 290 2.71e-35 136
Msa1065610 AT2G03670.2 42.000 150 82 2 200 344 272 421 1.50e-23 103
Msa1065610 AT1G06430.1 36.797 231 136 6 210 434 216 442 8.41e-34 135
Msa1065610 AT1G06430.3 36.797 231 136 6 210 434 216 442 8.41e-34 135
Msa1065610 AT1G06430.2 36.797 231 136 6 210 434 216 442 8.41e-34 135
Msa1065610 AT2G30950.1 36.364 231 137 6 210 434 223 449 1.26e-33 135
Msa1065610 AT2G30950.2 36.364 231 137 6 210 434 223 449 1.26e-33 135
Msa1065610 AT2G30950.3 36.364 231 137 6 210 434 223 449 1.26e-33 135
Msa1065610 AT2G30950.4 36.364 231 137 6 210 434 227 453 1.44e-33 134
Msa1065610 AT5G42270.1 37.229 231 135 6 210 434 246 472 1.48e-33 134
Msa1065610 AT2G26140.1 35.802 243 146 7 210 448 223 459 2.68e-33 134
Msa1065610 AT1G53780.3 32.780 241 151 6 200 433 325 561 6.40e-33 132
Msa1065610 AT1G53780.1 32.780 241 151 6 200 433 326 562 6.95e-33 132
Msa1065610 AT1G53780.4 32.780 241 151 6 200 433 326 562 6.95e-33 132
Msa1065610 AT1G50250.1 36.364 231 137 6 210 434 258 484 7.33e-33 132
Msa1065610 AT1G53780.2 32.780 241 151 6 200 433 347 583 7.40e-33 132
Msa1065610 AT1G07510.1 35.417 240 140 7 211 440 324 558 1.52e-32 132
Msa1065610 AT5G08470.3 35.526 228 137 5 213 435 834 1056 2.19e-32 132
Msa1065610 AT5G08470.1 35.526 228 137 5 213 435 843 1065 3.12e-32 131
Msa1065610 AT2G29080.1 35.146 239 141 7 211 440 319 552 1.24e-31 129
Msa1065610 AT3G47060.1 30.220 364 196 11 119 440 209 556 2.43e-31 128
Msa1065610 AT5G15250.1 35.498 231 139 6 210 434 220 446 3.24e-31 127
Msa1065610 AT5G53170.1 35.294 255 152 8 213 462 361 607 1.20e-30 126
Msa1065610 AT5G58870.1 30.887 327 180 9 152 435 232 555 7.75e-30 124
Msa1065610 AT4G23940.1 35.968 253 144 6 203 441 419 667 8.21e-30 124
Msa1065610 AT5G15250.2 33.202 253 138 8 210 434 220 469 1.37e-28 119
Msa1065610 AT5G64580.1 32.534 292 167 8 154 435 274 545 3.41e-28 119
Msa1065610 AT4G04180.2 31.489 235 141 7 206 428 306 532 9.08e-27 114
Msa1065610 AT4G04180.1 31.489 235 141 7 206 428 311 537 9.43e-27 114
Msa1065610 AT3G16290.1 30.249 281 172 8 205 475 401 667 6.56e-26 112
Msa1065610 AT1G45000.2 38.849 139 79 3 210 343 135 272 4.09e-25 106
Msa1065610 AT5G08470.2 37.037 135 80 2 213 344 843 975 3.48e-22 100
Msa1065610 AT4G04910.1 31.395 258 139 11 245 473 248 496 1.75e-21 98.6
Msa1065610 AT1G79560.3 34.804 204 119 6 247 440 526 725 2.82e-21 98.2
Msa1065610 AT1G79560.1 34.804 204 119 6 247 440 526 725 3.07e-21 97.8
Msa1065610 AT1G79560.2 34.804 204 119 6 247 440 526 725 3.18e-21 97.8
Msa1065610 AT2G18330.1 32.394 142 91 3 246 386 384 521 2.39e-13 72.8
Msa1065610 AT4G24710.3 33.333 162 88 4 248 391 215 374 8.60e-13 70.9
Msa1065610 AT4G24710.1 33.333 162 88 4 248 391 203 362 8.79e-13 70.9
Msa1065610 AT5G16930.1 32.192 146 94 3 246 390 397 538 2.49e-12 69.7
Msa1065610 AT3G04340.1 26.667 195 129 7 207 392 777 966 3.54e-12 69.7
Msa1065610 AT4G36580.1 31.690 142 92 3 246 386 381 518 4.09e-12 68.9
Msa1065610 AT3G03060.1 30.882 204 112 6 246 424 385 584 5.07e-12 68.6

Find 108 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATGTTTGACTAGGTTTC+GGG 0.221153 7_2:+59408271 None:intergenic
TTTCAAGGCAATATGATTTC+AGG 0.222782 7_2:+59404895 None:intergenic
AGGAGAGAAAACAGAGTTAA+AGG 0.225077 7_2:+59410105 None:intergenic
ATCCAATTCCTGTGGCTTAT+TGG 0.227753 7_2:+59406158 None:intergenic
CAGCTTCCTTGACGTCAAAA+TGG 0.244361 7_2:-59407798 Msa1065610:CDS
CAAGTTTAAACAAAAGTAAA+TGG 0.245979 7_2:-59405102 Msa1065610:CDS
CATTGAAGAAGCACTGAAAT+TGG 0.247194 7_2:+59410054 None:intergenic
GACAAGGGCACCAAAGTTTA+TGG 0.255512 7_2:-59404956 Msa1065610:three_prime_UTR
CCAGATGTTTGACTAGGTTT+CGG 0.283554 7_2:+59408270 None:intergenic
GATGACATTGTGATTGTAAT+TGG 0.285252 7_2:-59406853 Msa1065610:intron
TTTGAGATTTATCATAGATT+TGG 0.310939 7_2:+59410263 None:intergenic
AAAGGCAAAGCAAGCTTTAA+TGG 0.312478 7_2:-59408081 Msa1065610:CDS
AGGTAGCTCATTTGCCAATC+AGG 0.328156 7_2:-59408612 Msa1065610:intron
AATTGGATGATGCCGTTCTT+AGG 0.330851 7_2:-59406143 Msa1065610:CDS
GTAGTATTTGATAGTTTAGT+TGG 0.333617 7_2:+59408351 None:intergenic
AACAAGTCTCTTCTCTTTGT+TGG 0.337816 7_2:+59408044 None:intergenic
CTTTACCAAATGAAAATGTT+AGG 0.342458 7_2:-59405850 Msa1065610:CDS
ACCTTCTTCTCCTTCTTCTT+CGG 0.351247 7_2:-59410023 Msa1065610:CDS
ATGTTGAAACTATTTATTGA+TGG 0.354439 7_2:-59404922 Msa1065610:three_prime_UTR
TTAGAACCCAGCTCTCTAAT+TGG 0.361235 7_2:+59405312 None:intergenic
GAATTCCTTATCCAGTTTGA+TGG 0.364436 7_2:-59406892 Msa1065610:CDS
CTCTTTGGTCCGCCTGGTAA+TGG 0.372609 7_2:-59407883 Msa1065610:CDS
GAGAGATGGAATGAGGAGTT+TGG 0.374466 7_2:-59405070 Msa1065610:CDS
TGATTCTGAAGCCACTGCTT+TGG 0.387336 7_2:+59407846 None:intergenic
ATTTAAAACAAAGCCTTTCA+AGG 0.392962 7_2:+59404880 None:intergenic
AAGAGATCGATAAAGCTGTT+AGG 0.394509 7_2:-59409946 Msa1065610:CDS
AATTCCTTATCCAGTTTGAT+GGG 0.396055 7_2:-59406891 Msa1065610:CDS
AACCAATAAGCCACAGGAAT+TGG 0.397626 7_2:-59406160 Msa1065610:CDS
AGCTGTTAGGGCTGAAGAAT+GGG 0.399219 7_2:-59409933 Msa1065610:CDS
CAATTTCAGTGCTTCTTCAA+TGG 0.404872 7_2:-59410053 Msa1065610:CDS
CATAAAAGTGATTATGCAAA+AGG 0.419153 7_2:+59410184 None:intergenic
TGGATGTCACCCCATCAAAC+TGG 0.427668 7_2:+59406881 None:intergenic
ACAAGTTTCTGAGAGATTGC+AGG 0.447126 7_2:-59408765 Msa1065610:CDS
TCGTTTGAAACCGAAGAAGA+AGG 0.449660 7_2:+59410013 None:intergenic
CACGTGTATGTATAATATAA+TGG 0.451025 7_2:+59404819 None:intergenic
TCACCCCATCAAACTGGATA+AGG 0.451624 7_2:+59406887 None:intergenic
AAGCTGTTAGGGCTGAAGAA+TGG 0.453233 7_2:-59409934 Msa1065610:CDS
AAATCCAGGTGGCCTGGAAA+AGG 0.456194 7_2:-59408099 Msa1065610:intron
AGCTTCCTTGACGTCAAAAT+GGG 0.456655 7_2:-59407797 Msa1065610:intron
TTGCTTCTCTTTGGTCCGCC+TGG 0.465849 7_2:-59407889 Msa1065610:CDS
TAGGGCTGAAGAATGGGGTT+TGG 0.467614 7_2:-59409927 Msa1065610:CDS
AATGGCAACCATTCCATTCA+AGG 0.471071 7_2:+59404837 None:intergenic
ATCGTCAAAAGATATCAAAA+TGG 0.471460 7_2:-59408793 Msa1065610:CDS
CCATTCAAGGCTGTATTGCC+AGG 0.472571 7_2:+59404850 None:intergenic
TCAAAAGATATCAAAATGGC+AGG 0.473502 7_2:-59408789 Msa1065610:CDS
CCTGGCAATACAGCCTTGAA+TGG 0.483864 7_2:-59404850 Msa1065610:three_prime_UTR
TGAAATCATATTGCCTTGAA+AGG 0.485549 7_2:-59404893 Msa1065610:three_prime_UTR
AGAGATCGATAAAGCTGTTA+GGG 0.491343 7_2:-59409945 Msa1065610:CDS
CATTGCAGCTTCTTCACACA+AGG 0.491414 7_2:+59405338 None:intergenic
TTATCGAAATCCAGGTGGCC+TGG 0.491589 7_2:-59408105 Msa1065610:intron
AATGGGAAGAGCTTGAGAGA+TGG 0.492767 7_2:-59405084 Msa1065610:CDS
CCGAAACCTAGTCAAACATC+TGG 0.497956 7_2:-59408270 Msa1065610:CDS
AGCAGTTTGTGCACGGTTTG+AGG 0.498983 7_2:+59408380 None:intergenic
AATCACAATGTCATCAGGAT+TGG 0.499345 7_2:+59406861 None:intergenic
TTCACTACAGGAATGCTCAT+AGG 0.499729 7_2:-59409889 Msa1065610:CDS
TGAAAATTATGATACGAAAC+TGG 0.500786 7_2:-59408247 Msa1065610:CDS
AGCCACTGCTTTGGCAAGCA+TGG 0.503878 7_2:+59407855 None:intergenic
GCTTGTACGGACACTATTCA+TGG 0.504705 7_2:-59407654 Msa1065610:CDS
ATTACAATCACAATGTCATC+AGG 0.507002 7_2:+59406856 None:intergenic
AATGATGCCAATTAGAGAGC+TGG 0.511129 7_2:-59405319 Msa1065610:CDS
AGCACGTCGCTTACTAGGTA+AGG 0.512942 7_2:+59405787 None:intergenic
GAGAACATAGCATACCTGAT+TGG 0.513560 7_2:+59408598 None:intergenic
TTCCTTCATTCATCACTCCT+AGG 0.516342 7_2:-59409838 Msa1065610:intron
AGAGCTTGAGAGATGGAATG+AGG 0.517140 7_2:-59405077 Msa1065610:CDS
AAGTTTAAACAAAAGTAAAT+GGG 0.518697 7_2:-59405101 Msa1065610:CDS
ACCGAAGAAGAAGGAGAAGA+AGG 0.522002 7_2:+59410022 None:intergenic
AGGTAGAGATCTAGAGATGC+TGG 0.523797 7_2:-59405541 Msa1065610:CDS
GCATGGTTTACAGGATACTC+TGG 0.534864 7_2:-59405375 Msa1065610:intron
CAGGCTCTCAGTAGACGAGC+AGG 0.535200 7_2:-59408746 Msa1065610:intron
ATAGAAGTCCTTCTGTTCGA+TGG 0.538003 7_2:-59408197 Msa1065610:CDS
ATGACGCTATTCTTCACTAC+AGG 0.538194 7_2:-59409901 Msa1065610:CDS
AAAGCAAGCTTTAATGGAGA+TGG 0.543064 7_2:-59408075 Msa1065610:CDS
CACCTAGGAGTGATGAATGA+AGG 0.548059 7_2:+59409836 None:intergenic
TCCAAGGCAATACCTCTAGC+TGG 0.549612 7_2:+59408005 None:intergenic
GGTAAGAGGACTGAGGTATG+AGG 0.557226 7_2:-59405155 Msa1065610:CDS
AAGAGAAGAGACTTGTTCAC+TGG 0.560846 7_2:-59408038 Msa1065610:CDS
TCTGCTAAAACACAAACTCA+AGG 0.566087 7_2:-59405822 Msa1065610:CDS
TAGAAGTCCTTCTGTTCGAT+GGG 0.566235 7_2:-59408196 Msa1065610:CDS
AGCATGGTCTTACCATTACC+AGG 0.568160 7_2:+59407871 None:intergenic
ATGATGCCAATTAGAGAGCT+GGG 0.568226 7_2:-59405318 Msa1065610:CDS
TCTGTTCGATGGGACGATGT+TGG 0.570316 7_2:-59408186 Msa1065610:intron
GAACTGCAGCAGTTTGTGCA+CGG 0.573485 7_2:+59408373 None:intergenic
TGATGCCGTTCTTAGGAGAC+TGG 0.580216 7_2:-59406136 Msa1065610:intron
GGAGTGATGAATGAAGGAAC+AGG 0.584398 7_2:+59409842 None:intergenic
GTGAAGCTGAAAAGCTTGTA+CGG 0.588120 7_2:-59407667 Msa1065610:CDS
ACATCGTCCCATCGAACAGA+AGG 0.588663 7_2:+59408189 None:intergenic
AAGGACGACAAATGAAAATG+AGG 0.591136 7_2:-59406935 Msa1065610:CDS
AGGTGCAACCAATAAGCCAC+AGG 0.594898 7_2:-59406166 Msa1065610:CDS
CAATACAGCCTTGAATGGAA+TGG 0.604940 7_2:-59404845 Msa1065610:three_prime_UTR
GTGTAGAATTAGCTTCAAGT+AGG 0.606311 7_2:+59409864 None:intergenic
CTGAAATGTAGAGCAAGACA+AGG 0.607620 7_2:-59404972 Msa1065610:three_prime_UTR
GACCATGCTTGCCAAAGCAG+TGG 0.609312 7_2:-59407857 Msa1065610:CDS
TCATCAATGAAAATTACAGA+TGG 0.615857 7_2:+59407614 None:intergenic
GCTGTTAGGGCTGAAGAATG+GGG 0.620550 7_2:-59409932 Msa1065610:CDS
ATTCCTTATCCAGTTTGATG+GGG 0.624550 7_2:-59406890 Msa1065610:CDS
GAATCCTCAAAGAAAAGATG+AGG 0.629125 7_2:-59408310 Msa1065610:CDS
TCTCACCAGTCTCCTAAGAA+CGG 0.637516 7_2:+59406131 None:intergenic
CTGCTAAAACACAAACTCAA+GGG 0.643305 7_2:-59405821 Msa1065610:CDS
AGAAGGACTTCTATCTACAA+TGG 0.646183 7_2:+59408206 None:intergenic
CAAAAGATATCAAAATGGCA+GGG 0.647481 7_2:-59408788 Msa1065610:CDS
TGAGGACTTCAAGAAAGCAA+TGG 0.650387 7_2:-59405137 Msa1065610:CDS
ACGGCATCATCCAATTCCTG+TGG 0.676070 7_2:+59406150 None:intergenic
TGAAATGTAGAGCAAGACAA+GGG 0.680291 7_2:-59404971 Msa1065610:three_prime_UTR
GGTCTTCGAAGACCAGCTAG+AGG 0.690852 7_2:-59408017 Msa1065610:intron
TTTACCAGGTAAGAGGACTG+AGG 0.698763 7_2:-59405162 Msa1065610:intron
TTGATAGTATAATGTCAACA+AGG 0.721787 7_2:-59406954 Msa1065610:CDS
ATGCTGGTAAAAGAAACCGA+AGG 0.728590 7_2:-59405525 Msa1065610:intron
ATGGTCTTACCATTACCAGG+CGG 0.798518 7_2:+59407874 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAGGTTAATTATTTTTTT+TGG - chr7_2:59409944-59409963 Msa1065610:CDS 10.0%
!!! ATTTTTAATATTTGTGTTGT+TGG - chr7_2:59405468-59405487 Msa1065610:intron 15.0%
!! TCTCAATTAAAATAAATTGA+TGG + chr7_2:59406000-59406019 None:intergenic 15.0%
!! CAAAAAATCATTTAATACAA+GGG + chr7_2:59407664-59407683 None:intergenic 15.0%
!! ACAAAAAATCATTTAATACA+AGG + chr7_2:59407665-59407684 None:intergenic 15.0%
!! TTTCATCTTCTAATTAAAAT+AGG - chr7_2:59407797-59407816 Msa1065610:intron 15.0%
!! TGTTTAATTAGTTAAATAGA+TGG - chr7_2:59408057-59408076 Msa1065610:CDS 15.0%
!! ATGCAATTATAATTATTAGA+TGG - chr7_2:59408577-59408596 Msa1065610:intron 15.0%
!! TGCAATTATAATTATTAGAT+GGG - chr7_2:59408578-59408597 Msa1065610:intron 15.0%
!! CAAAAATAATGAATCATATT+TGG + chr7_2:59409731-59409750 None:intergenic 15.0%
!! AAGTTTAAACAAAAGTAAAT+GGG - chr7_2:59410029-59410048 Msa1065610:CDS 15.0%
!!! ATTAATTTTACCATAAACTT+TGG + chr7_2:59410187-59410206 None:intergenic 15.0%
!!! TTTGAGATTTATCATAGATT+TGG + chr7_2:59404870-59404889 None:intergenic 20.0%
!!! ATTTGATTGATTTGTTTATG+TGG - chr7_2:59405371-59405390 Msa1065610:intron 20.0%
!!! TTTGATTGATTTGTTTATGT+GGG - chr7_2:59405372-59405391 Msa1065610:intron 20.0%
!!! TTTTTTCATTGATTAGTTGA+AGG - chr7_2:59405411-59405430 Msa1065610:intron 20.0%
!!! TTTTTCATTGATTAGTTGAA+GGG - chr7_2:59405412-59405431 Msa1065610:intron 20.0%
!!! CTATTATTCAACTTTGATTT+TGG + chr7_2:59405747-59405766 None:intergenic 20.0%
!! TCTTCAATTGACAATAATTA+AGG + chr7_2:59405780-59405799 None:intergenic 20.0%
!! TCGTTTAAAAAACTCATTAT+TGG + chr7_2:59405870-59405889 None:intergenic 20.0%
!!! CAAGTTAAAATCTCTATTTT+TGG - chr7_2:59405902-59405921 Msa1065610:intron 20.0%
!! ATTATAACTAAGACCAAAAT+TGG + chr7_2:59406047-59406066 None:intergenic 20.0%
!! AATTCAGTTAGTTAATCATA+AGG - chr7_2:59406145-59406164 Msa1065610:CDS 20.0%
!! ATTCAGTTAGTTAATCATAA+GGG - chr7_2:59406146-59406165 Msa1065610:CDS 20.0%
!! CAACAAAAAAATAAGATCAT+AGG + chr7_2:59406258-59406277 None:intergenic 20.0%
!!! CTATGATCTTATTTTTTTGT+TGG - chr7_2:59406256-59406275 Msa1065610:intron 20.0%
!! AATTCTCATAAAAGTCAAAA+CGG + chr7_2:59406447-59406466 None:intergenic 20.0%
!! GATAATAAGAATCAAACAAA+TGG + chr7_2:59407010-59407029 None:intergenic 20.0%
!! ATGAAAACTATAATTCTTTG+AGG - chr7_2:59407607-59407626 Msa1065610:intron 20.0%
!!! ATGATTTTTTGTTTAATGCT+TGG - chr7_2:59407673-59407692 Msa1065610:CDS 20.0%
!! TAAGAATGTAGATGTAAAAA+TGG - chr7_2:59407736-59407755 Msa1065610:intron 20.0%
!! AAGAATGTAGATGTAAAAAT+GGG - chr7_2:59407737-59407756 Msa1065610:intron 20.0%
!!! AGTAATCTACCTTTTTTTTT+TGG + chr7_2:59407838-59407857 None:intergenic 20.0%
!! ATTTACTAAACAGAAAGAAA+AGG - chr7_2:59408080-59408099 Msa1065610:CDS 20.0%
!! TTAATATCATTTGAATGAAG+TGG + chr7_2:59408132-59408151 None:intergenic 20.0%
!! TTTAAAAGTGAAAACAAGAT+AGG + chr7_2:59408700-59408719 None:intergenic 20.0%
!!! ATATAAAAGTTTAGTATCGA+GGG + chr7_2:59409377-59409396 None:intergenic 20.0%
!!! AACTTTTATATGCATATTCT+TGG - chr7_2:59409386-59409405 Msa1065610:intron 20.0%
!! ATGCAAAAAAATTACCAATT+GGG - chr7_2:59409428-59409447 Msa1065610:intron 20.0%
!!! TTTTATTGTGTCCAAAATTT+GGG - chr7_2:59409703-59409722 Msa1065610:intron 20.0%
!!! TTCATTATTTTTGTTTTGCA+TGG - chr7_2:59409738-59409757 Msa1065610:intron 20.0%
!! ATAATTAACCTTAACAACAA+AGG + chr7_2:59409938-59409957 None:intergenic 20.0%
!!! TTATTTTTTTTGGTTTTACC+AGG - chr7_2:59409954-59409973 Msa1065610:CDS 20.0%
!!! CATTTACTTTTGTTTAAACT+TGG + chr7_2:59410030-59410049 None:intergenic 20.0%
!! CAAGTTTAAACAAAAGTAAA+TGG - chr7_2:59410028-59410047 Msa1065610:CDS 20.0%
!! ATGTTGAAACTATTTATTGA+TGG - chr7_2:59410208-59410227 Msa1065610:five_prime_UTR 20.0%
!!! AAAGGCTTTGTTTTAAATTT+AGG - chr7_2:59410255-59410274 Msa1065610:five_prime_UTR 20.0%
!!! AAGGCTTTGTTTTAAATTTA+GGG - chr7_2:59410256-59410275 Msa1065610:five_prime_UTR 20.0%
! CATAAAAGTGATTATGCAAA+AGG + chr7_2:59404949-59404968 None:intergenic 25.0%
!!! TTTTCATTGATTAGTTGAAG+GGG - chr7_2:59405413-59405432 Msa1065610:intron 25.0%
!!! GTAAAAGCATTAATCTTGTT+AGG - chr7_2:59405490-59405509 Msa1065610:intron 25.0%
!! TTTTGACGAAAGATATACTT+TGG - chr7_2:59405669-59405688 Msa1065610:intron 25.0%
! TCTATAAAATCTCATGATCA+TGG - chr7_2:59405696-59405715 Msa1065610:intron 25.0%
! ATTATTGTCAATTGAAGACT+TGG - chr7_2:59405782-59405801 Msa1065610:intron 25.0%
! TACAAACTTACATACGTTTA+TGG + chr7_2:59405958-59405977 None:intergenic 25.0%
!! GCTAAAAGTTAATCCAATTT+TGG - chr7_2:59406031-59406050 Msa1065610:intron 25.0%
! AATAGCAGATTTCTGATATT+CGG - chr7_2:59406064-59406083 Msa1065610:intron 25.0%
! ATGATTAACTAACTGAATTC+CGG + chr7_2:59406144-59406163 None:intergenic 25.0%
! ATCGTCAAAAGATATCAAAA+TGG - chr7_2:59406337-59406356 Msa1065610:intron 25.0%
! TGGAGAAAAAGGAATATTAA+TGG + chr7_2:59406713-59406732 None:intergenic 25.0%
!!! ACAAACATTTTTGGAGAAAA+AGG + chr7_2:59406724-59406743 None:intergenic 25.0%
!! GTAGTATTTGATAGTTTAGT+TGG + chr7_2:59406782-59406801 None:intergenic 25.0%
! TGAAAATTATGATACGAAAC+TGG - chr7_2:59406883-59406902 Msa1065610:CDS 25.0%
!!! AGCAACATTTTTTAATGTCA+CGG - chr7_2:59407309-59407328 Msa1065610:intron 25.0%
! TCATCAATGAAAATTACAGA+TGG + chr7_2:59407519-59407538 None:intergenic 25.0%
!! ATCTGTAATTTTCATTGATG+AGG - chr7_2:59407518-59407537 Msa1065610:intron 25.0%
!!! TTTTTGTTTAATGCTTGGTT+TGG - chr7_2:59407678-59407697 Msa1065610:intron 25.0%
! AGAATGTAGATGTAAAAATG+GGG - chr7_2:59407738-59407757 Msa1065610:intron 25.0%
!! ATCTCTTTTGATAAACTTCT+TGG - chr7_2:59407770-59407789 Msa1065610:intron 25.0%
!! TCTCTTTTGATAAACTTCTT+GGG - chr7_2:59407771-59407790 Msa1065610:intron 25.0%
!!! AATCTACCTTTTTTTTTTGG+TGG + chr7_2:59407835-59407854 None:intergenic 25.0%
! TGTGGAAATGATTAAAAATC+TGG + chr7_2:59407950-59407969 None:intergenic 25.0%
! TAGTGCTTGTCAAATTATAT+TGG + chr7_2:59407976-59407995 None:intergenic 25.0%
!! TTGATAGTATAATGTCAACA+AGG - chr7_2:59408176-59408195 Msa1065610:intron 25.0%
!! TGCTCTTGTTAATCTATTTT+GGG - chr7_2:59408383-59408402 Msa1065610:CDS 25.0%
! ACATAAAGTCATTTGTCAAA+GGG + chr7_2:59408439-59408458 None:intergenic 25.0%
!! TATAATTATTAGATGGGCTT+TGG - chr7_2:59408584-59408603 Msa1065610:intron 25.0%
!! ATAATTATTAGATGGGCTTT+GGG - chr7_2:59408585-59408604 Msa1065610:intron 25.0%
! TTTCATCCATCAATAAATAG+AGG + chr7_2:59408779-59408798 None:intergenic 25.0%
!! TCATACTTTTAATCCAGTAA+AGG + chr7_2:59409038-59409057 None:intergenic 25.0%
!! CTAACATTTTCATTTGGTAA+AGG + chr7_2:59409282-59409301 None:intergenic 25.0%
! CTTTACCAAATGAAAATGTT+AGG - chr7_2:59409280-59409299 Msa1065610:intron 25.0%
!! AGTTTCCTAACATTTTCATT+TGG + chr7_2:59409288-59409307 None:intergenic 25.0%
!! TATAAAAGTTTAGTATCGAG+GGG + chr7_2:59409376-59409395 None:intergenic 25.0%
! CATATAAAAGTTTAGTATCG+AGG + chr7_2:59409378-59409397 None:intergenic 25.0%
!! TTTTATATGCATATTCTTGG+AGG - chr7_2:59409389-59409408 Msa1065610:intron 25.0%
! CATGCAAAAAAATTACCAAT+TGG - chr7_2:59409427-59409446 Msa1065610:intron 25.0%
! ACAAATTATAAACTCCCAAT+TGG + chr7_2:59409445-59409464 None:intergenic 25.0%
!!! ACTTACGATTTTTTTGTTAC+AGG - chr7_2:59409569-59409588 Msa1065610:intron 25.0%
! TCAAAATCTATACTTACCTT+CGG + chr7_2:59409624-59409643 None:intergenic 25.0%
! TAAAACAAAGAAGAGAGAAA+AGG + chr7_2:59409688-59409707 None:intergenic 25.0%
!!! GTTTTATTGTGTCCAAAATT+TGG - chr7_2:59409702-59409721 Msa1065610:intron 25.0%
!!! AAAATCTTCCTTTGTTGTTA+AGG - chr7_2:59409927-59409946 Msa1065610:CDS 25.0%
!! ATTTAAAACAAAGCCTTTCA+AGG + chr7_2:59410253-59410272 None:intergenic 25.0%
! CACGTGTATGTATAATATAA+TGG + chr7_2:59410314-59410333 None:intergenic 25.0%
ATATAGCAAAAAACTCACCT+AGG + chr7_2:59405312-59405331 None:intergenic 30.0%
ATTAATCTTGTTAGGACGAA+TGG - chr7_2:59405498-59405517 Msa1065610:intron 30.0%
TCTTAGAGTTGTTCTTAGTT+TGG - chr7_2:59405568-59405587 Msa1065610:intron 30.0%
! TTGTCTTGTTAGAGTATGTT+TGG - chr7_2:59405605-59405624 Msa1065610:intron 30.0%
AGCTTCTCAATTAGAACTTA+TGG - chr7_2:59405820-59405839 Msa1065610:CDS 30.0%
TCAAAAGATATCAAAATGGC+AGG - chr7_2:59406341-59406360 Msa1065610:intron 30.0%
CAAAAGATATCAAAATGGCA+GGG - chr7_2:59406342-59406361 Msa1065610:intron 30.0%
AGTCAAAACGGAATTCAAAA+AGG + chr7_2:59406435-59406454 None:intergenic 30.0%
! TGATTTTGTTGAAGCCAAAA+CGG + chr7_2:59406591-59406610 None:intergenic 30.0%
TCAGTGCTTCTTAAAACATA+TGG - chr7_2:59406608-59406627 Msa1065610:intron 30.0%
TACGTTTCACTGAACATTAT+TGG - chr7_2:59406663-59406682 Msa1065610:intron 30.0%
ACGTTTCACTGAACATTATT+GGG - chr7_2:59406664-59406683 Msa1065610:intron 30.0%
GATTCTTATTATCGAAATCC+AGG - chr7_2:59407017-59407036 Msa1065610:intron 30.0%
! CTGATGAACCTTTTCATTTT+AGG - chr7_2:59407217-59407236 Msa1065610:intron 30.0%
GAAGCAAACCTAAAATGAAA+AGG + chr7_2:59407228-59407247 None:intergenic 30.0%
!!! ATTTTAGGTTTGCTTCTCTT+TGG - chr7_2:59407232-59407251 Msa1065610:intron 30.0%
AACTCAACACAAACAAGTTA+GGG + chr7_2:59407378-59407397 None:intergenic 30.0%
AAACTCAACACAAACAAGTT+AGG + chr7_2:59407379-59407398 None:intergenic 30.0%
TCTCTCTCATCTATATAGAA+AGG - chr7_2:59407543-59407562 Msa1065610:intron 30.0%
GTGCAACTCTAATTGATTAT+TGG - chr7_2:59407702-59407721 Msa1065610:intron 30.0%
ACTACACCACCAAAAAAAAA+AGG - chr7_2:59407826-59407845 Msa1065610:CDS 30.0%
!! GTCAAATTATATTGGTCTTG+TGG + chr7_2:59407968-59407987 None:intergenic 30.0%
TATCGTAAGTGACTAGATTT+AGG + chr7_2:59408010-59408029 None:intergenic 30.0%
AATTCCTTATCCAGTTTGAT+GGG - chr7_2:59408239-59408258 Msa1065610:CDS 30.0%
ATTACAATCACAATGTCATC+AGG + chr7_2:59408277-59408296 None:intergenic 30.0%
GATGACATTGTGATTGTAAT+TGG - chr7_2:59408277-59408296 Msa1065610:CDS 30.0%
TTCTCTATCTGTAATGAACA+TGG - chr7_2:59408325-59408344 Msa1065610:CDS 30.0%
! GTGCTCTTGTTAATCTATTT+TGG - chr7_2:59408382-59408401 Msa1065610:CDS 30.0%
CATAAAGTCATTTGTCAAAG+GGG + chr7_2:59408438-59408457 None:intergenic 30.0%
CACATAAAGTCATTTGTCAA+AGG + chr7_2:59408440-59408459 None:intergenic 30.0%
CTTTGACAAATGACTTTATG+TGG - chr7_2:59408438-59408457 Msa1065610:intron 30.0%
TGTGGTTAAAATTCTCTTCT+AGG - chr7_2:59408456-59408475 Msa1065610:intron 30.0%
GTGGTTAAAATTCTCTTCTA+GGG - chr7_2:59408457-59408476 Msa1065610:intron 30.0%
AAGATAGGAGTAAACTTTAG+AGG - chr7_2:59408636-59408655 Msa1065610:intron 30.0%
TCATTCTGTAACGATGTTAT+AGG + chr7_2:59408669-59408688 None:intergenic 30.0%
TTACAATGGAAACCATATGT+GGG + chr7_2:59408736-59408755 None:intergenic 30.0%
ATTACAATGGAAACCATATG+TGG + chr7_2:59408737-59408756 None:intergenic 30.0%
ATATGGCCTCTATTTATTGA+TGG - chr7_2:59408770-59408789 Msa1065610:CDS 30.0%
ATGGATGAAAAACTAAACTG+TGG - chr7_2:59408789-59408808 Msa1065610:CDS 30.0%
ATTTCTTCATTGTCCTTTAC+TGG - chr7_2:59409022-59409041 Msa1065610:intron 30.0%
AAACAAGAAGAGAGTTAGTA+AGG + chr7_2:59409229-59409248 None:intergenic 30.0%
!!! TACACTTTTAACTTTCTACG+CGG - chr7_2:59409469-59409488 Msa1065610:intron 30.0%
!!! TTTTGTTTTGCATGGTTTAC+AGG - chr7_2:59409746-59409765 Msa1065610:intron 30.0%
TTTCAAGGCAATATGATTTC+AGG + chr7_2:59410238-59410257 None:intergenic 30.0%
TGAAATCATATTGCCTTGAA+AGG - chr7_2:59410237-59410256 Msa1065610:five_prime_UTR 30.0%
!!! TTGTTTTAAATTTAGGGACC+TGG - chr7_2:59410262-59410281 Msa1065610:five_prime_UTR 30.0%
!!! TGATCGATGAGTTTTTTGCA+GGG - chr7_2:59404991-59405010 Msa1065610:three_prime_UTR 35.0%
AGGAGAGAAAACAGAGTTAA+AGG + chr7_2:59405028-59405047 None:intergenic 35.0%
GAAGAAGAAGAAGAAGATTG+AGG + chr7_2:59405048-59405067 None:intergenic 35.0%
!! CATTGAAGAAGCACTGAAAT+TGG + chr7_2:59405079-59405098 None:intergenic 35.0%
CAATTTCAGTGCTTCTTCAA+TGG - chr7_2:59405077-59405096 Msa1065610:CDS 35.0%
AAGAGATCGATAAAGCTGTT+AGG - chr7_2:59405184-59405203 Msa1065610:intron 35.0%
AGAGATCGATAAAGCTGTTA+GGG - chr7_2:59405185-59405204 Msa1065610:intron 35.0%
! GTGTAGAATTAGCTTCAAGT+AGG + chr7_2:59405269-59405288 None:intergenic 35.0%
TTAGTTGAAGGGGAGAAAAA+TGG - chr7_2:59405423-59405442 Msa1065610:intron 35.0%
AGGGGAGAAAAATGGTATAT+AGG - chr7_2:59405431-59405450 Msa1065610:intron 35.0%
ATCTTTCGTCAAAACCACTA+TGG + chr7_2:59405663-59405682 None:intergenic 35.0%
AGATGCAGCAAAACAAGAAT+GGG + chr7_2:59406102-59406121 None:intergenic 35.0%
AAGATGCAGCAAAACAAGAA+TGG + chr7_2:59406103-59406122 None:intergenic 35.0%
TTTCAGTTTCCAAATTGCAC+CGG - chr7_2:59406122-59406141 Msa1065610:intron 35.0%
AAGAGGAATAGGAACAAATG+AGG + chr7_2:59406488-59406507 None:intergenic 35.0%
TGGAATGGAAAAAGAGGAAT+AGG + chr7_2:59406499-59406518 None:intergenic 35.0%
! TATTCCTCTTTTTCCATTCC+AGG - chr7_2:59406498-59406517 Msa1065610:intron 35.0%
TCTCTGTAAACTGTAAGTAC+AGG - chr7_2:59406551-59406570 Msa1065610:intron 35.0%
CTCTGTAAACTGTAAGTACA+GGG - chr7_2:59406552-59406571 Msa1065610:intron 35.0%
!!! GTTTTTTCTTTTCCCCGTTT+TGG - chr7_2:59406574-59406593 Msa1065610:intron 35.0%
! ATTTTGTTGAAGCCAAAACG+GGG + chr7_2:59406589-59406608 None:intergenic 35.0%
! GATTTTGTTGAAGCCAAAAC+GGG + chr7_2:59406590-59406609 None:intergenic 35.0%
! AGGTGCTCTACAAACATTTT+TGG + chr7_2:59406733-59406752 None:intergenic 35.0%
GAATCCTCAAAGAAAAGATG+AGG - chr7_2:59406820-59406839 Msa1065610:intron 35.0%
! TTCACCTCATCTTTTCTTTG+AGG + chr7_2:59406827-59406846 None:intergenic 35.0%
! TTTTCACCAGATGTTTGACT+AGG + chr7_2:59406869-59406888 None:intergenic 35.0%
AGAAGGACTTCTATCTACAA+TGG + chr7_2:59406927-59406946 None:intergenic 35.0%
TCTTATTATCGAAATCCAGG+TGG - chr7_2:59407020-59407039 Msa1065610:intron 35.0%
! AAAGGCAAAGCAAGCTTTAA+TGG - chr7_2:59407049-59407068 Msa1065610:intron 35.0%
! AAAGCAAGCTTTAATGGAGA+TGG - chr7_2:59407055-59407074 Msa1065610:intron 35.0%
AACAAGTCTCTTCTCTTTGT+TGG + chr7_2:59407089-59407108 None:intergenic 35.0%
TTACATAACCCAAAGAGACA+AGG + chr7_2:59407152-59407171 None:intergenic 35.0%
! AGACTTAAGAAGTGTAACCA+TGG - chr7_2:59407411-59407430 Msa1065610:intron 35.0%
TAGTGAGTACAAGTTAACCA+TGG + chr7_2:59407431-59407450 None:intergenic 35.0%
ACTTGTACTCACTACTCAAT+AGG - chr7_2:59407437-59407456 Msa1065610:intron 35.0%
AAATTTATAGCAGGAGTAGG+GGG + chr7_2:59407576-59407595 None:intergenic 35.0%
CAAATTTATAGCAGGAGTAG+GGG + chr7_2:59407577-59407596 None:intergenic 35.0%
CCAAATTTATAGCAGGAGTA+GGG + chr7_2:59407578-59407597 None:intergenic 35.0%
CTTGTTGCCAAATTTATAGC+AGG + chr7_2:59407585-59407604 None:intergenic 35.0%
ATGTAGATGTAAAAATGGGG+TGG - chr7_2:59407741-59407760 Msa1065610:intron 35.0%
AAGGACGACAAATGAAAATG+AGG - chr7_2:59408195-59408214 Msa1065610:CDS 35.0%
!! TTCAGATTTTAATCGTCTGC+TGG + chr7_2:59408221-59408240 None:intergenic 35.0%
GAATTCCTTATCCAGTTTGA+TGG - chr7_2:59408238-59408257 Msa1065610:CDS 35.0%
ATTCCTTATCCAGTTTGATG+GGG - chr7_2:59408240-59408259 Msa1065610:CDS 35.0%
AATCACAATGTCATCAGGAT+TGG + chr7_2:59408272-59408291 None:intergenic 35.0%
!! ATTAACAAGAGCACTGTTCA+TGG + chr7_2:59408376-59408395 None:intergenic 35.0%
CTGGAATTCGAAAAACTCAT+GGG - chr7_2:59408484-59408503 Msa1065610:intron 35.0%
TAAATAGAGGCCATATTCTC+AGG + chr7_2:59408766-59408785 None:intergenic 35.0%
AACTGTGGCTATTGTAAATC+TGG - chr7_2:59408804-59408823 Msa1065610:CDS 35.0%
TTCCTTTCCCTTCTGAATAT+AGG - chr7_2:59408944-59408963 Msa1065610:intron 35.0%
TTCTCCACTTAAAGTCACAT+CGG + chr7_2:59409084-59409103 None:intergenic 35.0%
!!! CTTCTTGTTTTTACTGTGCT+AGG - chr7_2:59409239-59409258 Msa1065610:intron 35.0%
TCTGCTAAAACACAAACTCA+AGG - chr7_2:59409308-59409327 Msa1065610:intron 35.0%
CTGCTAAAACACAAACTCAA+GGG - chr7_2:59409309-59409328 Msa1065610:intron 35.0%
!! GATTTTGAGTCACGATGAAA+AGG - chr7_2:59409636-59409655 Msa1065610:intron 35.0%
!!! CATATTTGGTGCCCAAATTT+TGG + chr7_2:59409717-59409736 None:intergenic 35.0%
GCGCAACGAAAAAATTAAAG+TGG + chr7_2:59409885-59409904 None:intergenic 35.0%
!!! TTTTGGTTTTACCAGGTAAG+AGG - chr7_2:59409961-59409980 Msa1065610:CDS 35.0%
TGAAATGTAGAGCAAGACAA+GGG - chr7_2:59410159-59410178 Msa1065610:five_prime_UTR 35.0%
!!! GTGATCGATGAGTTTTTTGC+AGG - chr7_2:59404990-59405009 Msa1065610:three_prime_UTR 40.0%
ACCTTCTTCTCCTTCTTCTT+CGG - chr7_2:59405107-59405126 Msa1065610:CDS 40.0%
! TCGTTTGAAACCGAAGAAGA+AGG + chr7_2:59405120-59405139 None:intergenic 40.0%
ATGACGCTATTCTTCACTAC+AGG - chr7_2:59405229-59405248 Msa1065610:intron 40.0%
TTCACTACAGGAATGCTCAT+AGG - chr7_2:59405241-59405260 Msa1065610:intron 40.0%
TTCCTTCATTCATCACTCCT+AGG - chr7_2:59405292-59405311 Msa1065610:intron 40.0%
!! TTCTTAGTTTGGTGCTAGCT+AGG - chr7_2:59405579-59405598 Msa1065610:intron 40.0%
GAAATCACATTGTGCCATAG+TGG - chr7_2:59405646-59405665 Msa1065610:intron 40.0%
GATGCAGCAAAACAAGAATG+GGG + chr7_2:59406101-59406120 None:intergenic 40.0%
AACTGAATTCCGGTGCAATT+TGG + chr7_2:59406134-59406153 None:intergenic 40.0%
CTAAGCTGTCACATAGTCAA+AGG + chr7_2:59406176-59406195 None:intergenic 40.0%
CCTTTGTCATCAAGTTACTG+AGG + chr7_2:59406229-59406248 None:intergenic 40.0%
! CCTCAGTAACTTGATGACAA+AGG - chr7_2:59406226-59406245 Msa1065610:intron 40.0%
! ACAAGTTTCTGAGAGATTGC+AGG - chr7_2:59406365-59406384 Msa1065610:intron 40.0%
GAGAACATAGCATACCTGAT+TGG + chr7_2:59406535-59406554 None:intergenic 40.0%
CAGATGTTTGACTAGGTTTC+GGG + chr7_2:59406862-59406881 None:intergenic 40.0%
CCAGATGTTTGACTAGGTTT+CGG + chr7_2:59406863-59406882 None:intergenic 40.0%
ATAGAAGTCCTTCTGTTCGA+TGG - chr7_2:59406933-59406952 Msa1065610:CDS 40.0%
TAGAAGTCCTTCTGTTCGAT+GGG - chr7_2:59406934-59406953 Msa1065610:CDS 40.0%
! AAGAGAAGAGACTTGTTCAC+TGG - chr7_2:59407092-59407111 Msa1065610:intron 40.0%
AGCTTCCTTGACGTCAAAAT+GGG - chr7_2:59407333-59407352 Msa1065610:intron 40.0%
!! AAGTACCCATTTTGACGTCA+AGG + chr7_2:59407341-59407360 None:intergenic 40.0%
TGTACTCACTACTCAATAGG+TGG - chr7_2:59407440-59407459 Msa1065610:intron 40.0%
GTACTCACTACTCAATAGGT+GGG - chr7_2:59407441-59407460 Msa1065610:intron 40.0%
GTGAAGCTGAAAAGCTTGTA+CGG - chr7_2:59407463-59407482 Msa1065610:intron 40.0%
CCCTACTCCTGCTATAAATT+TGG - chr7_2:59407575-59407594 Msa1065610:intron 40.0%
GCCAAATTTATAGCAGGAGT+AGG + chr7_2:59407579-59407598 None:intergenic 40.0%
ATGTAAAAATGGGGTGGCTA+AGG - chr7_2:59407747-59407766 Msa1065610:intron 40.0%
CTGACATTCAAAAAAGACGC+TGG + chr7_2:59407899-59407918 None:intergenic 40.0%
TTTGTCAAAGGGGAACAAAG+AGG + chr7_2:59408428-59408447 None:intergenic 40.0%
! AATTCTCTTCTAGGGAATGC+TGG - chr7_2:59408465-59408484 Msa1065610:intron 40.0%
GCTGGAATTCGAAAAACTCA+TGG - chr7_2:59408483-59408502 Msa1065610:intron 40.0%
TCAGTTGTATCTCCCACATA+TGG - chr7_2:59408721-59408740 Msa1065610:intron 40.0%
TAATCTGCCTCCTGAGAATA+TGG - chr7_2:59408753-59408772 Msa1065610:CDS 40.0%
CACCTATATTCAGAAGGGAA+AGG + chr7_2:59408949-59408968 None:intergenic 40.0%
GGTTGCACCTATATTCAGAA+GGG + chr7_2:59408954-59408973 None:intergenic 40.0%
TGGTTGCACCTATATTCAGA+AGG + chr7_2:59408955-59408974 None:intergenic 40.0%
AACCAATAAGCCACAGGAAT+TGG - chr7_2:59408970-59408989 Msa1065610:intron 40.0%
ATCCAATTCCTGTGGCTTAT+TGG + chr7_2:59408975-59408994 None:intergenic 40.0%
AATTGGATGATGCCGTTCTT+AGG - chr7_2:59408987-59409006 Msa1065610:intron 40.0%
ACATCGGCAATATGACATTC+TGG + chr7_2:59409068-59409087 None:intergenic 40.0%
ATTGCCGATGTGACTTTAAG+TGG - chr7_2:59409077-59409096 Msa1065610:intron 40.0%
ATGCTGGTAAAAGAAACCGA+AGG - chr7_2:59409605-59409624 Msa1065610:intron 40.0%
AATGATGCCAATTAGAGAGC+TGG - chr7_2:59409811-59409830 Msa1065610:intron 40.0%
ATGATGCCAATTAGAGAGCT+GGG - chr7_2:59409812-59409831 Msa1065610:intron 40.0%
TTAGAACCCAGCTCTCTAAT+TGG + chr7_2:59409821-59409840 None:intergenic 40.0%
TTCTAACATTCTCACCGTCA+AGG - chr7_2:59409835-59409854 Msa1065610:intron 40.0%
TGAGGACTTCAAGAAAGCAA+TGG - chr7_2:59409993-59410012 Msa1065610:CDS 40.0%
CTGAAATGTAGAGCAAGACA+AGG - chr7_2:59410158-59410177 Msa1065610:five_prime_UTR 40.0%
CAATACAGCCTTGAATGGAA+TGG - chr7_2:59410285-59410304 Msa1065610:five_prime_UTR 40.0%
AATGGCAACCATTCCATTCA+AGG + chr7_2:59410296-59410315 None:intergenic 40.0%
ACCGAAGAAGAAGGAGAAGA+AGG + chr7_2:59405111-59405130 None:intergenic 45.0%
AAGCTGTTAGGGCTGAAGAA+TGG - chr7_2:59405196-59405215 Msa1065610:intron 45.0%
AGCTGTTAGGGCTGAAGAAT+GGG - chr7_2:59405197-59405216 Msa1065610:intron 45.0%
GGAGTGATGAATGAAGGAAC+AGG + chr7_2:59405291-59405310 None:intergenic 45.0%
CACCTAGGAGTGATGAATGA+AGG + chr7_2:59405297-59405316 None:intergenic 45.0%
GCTACCTGGAATGGAAAAAG+AGG + chr7_2:59406505-59406524 None:intergenic 45.0%
TGATTGGCAAATGAGCTACC+TGG + chr7_2:59406519-59406538 None:intergenic 45.0%
AGGTAGCTCATTTGCCAATC+AGG - chr7_2:59406518-59406537 Msa1065610:intron 45.0%
CACTGAACATTATTGGGTGC+TGG - chr7_2:59406670-59406689 Msa1065610:intron 45.0%
CCGAAACCTAGTCAAACATC+TGG - chr7_2:59406860-59406879 Msa1065610:CDS 45.0%
!! AAGCTTGCTTTGCCTTTTCC+AGG + chr7_2:59407046-59407065 None:intergenic 45.0%
CCTTGGAACCTTGTCTCTTT+GGG - chr7_2:59407141-59407160 Msa1065610:intron 45.0%
! ATGGTCTTACCATTACCAGG+CGG + chr7_2:59407259-59407278 None:intergenic 45.0%
! AGCATGGTCTTACCATTACC+AGG + chr7_2:59407262-59407281 None:intergenic 45.0%
!! TGATTCTGAAGCCACTGCTT+TGG + chr7_2:59407287-59407306 None:intergenic 45.0%
CAGCTTCCTTGACGTCAAAA+TGG - chr7_2:59407332-59407351 Msa1065610:intron 45.0%
GCTTGTACGGACACTATTCA+TGG - chr7_2:59407476-59407495 Msa1065610:intron 45.0%
TCACCCCATCAAACTGGATA+AGG + chr7_2:59408246-59408265 None:intergenic 45.0%
GGGATTGTTCCAGAAGAACT+CGG - chr7_2:59408605-59408624 Msa1065610:intron 45.0%
!! AACTCGGCTGCTCTAAAGAT+AGG - chr7_2:59408621-59408640 Msa1065610:intron 45.0%
TCTCAGGAGGCAGATTACAA+TGG + chr7_2:59408750-59408769 None:intergenic 45.0%
ATAGAGGCCATATTCTCAGG+AGG + chr7_2:59408763-59408782 None:intergenic 45.0%
TCTCACCAGTCTCCTAAGAA+CGG + chr7_2:59409002-59409021 None:intergenic 45.0%
! AAAAGAGCACGTCGCTTACT+AGG + chr7_2:59409351-59409370 None:intergenic 45.0%
! ATGCATATTCTTGGAGGCAC+CGG - chr7_2:59409395-59409414 Msa1065610:intron 45.0%
! TTTTTGCATGTTCCGCCTTC+CGG + chr7_2:59409417-59409436 None:intergenic 45.0%
AGGTAGAGATCTAGAGATGC+TGG - chr7_2:59409589-59409608 Msa1065610:intron 45.0%
GCATGGTTTACAGGATACTC+TGG - chr7_2:59409755-59409774 Msa1065610:intron 45.0%
CATTGCAGCTTCTTCACACA+AGG + chr7_2:59409795-59409814 None:intergenic 45.0%
TTTACCAGGTAAGAGGACTG+AGG - chr7_2:59409968-59409987 Msa1065610:CDS 45.0%
AATGGGAAGAGCTTGAGAGA+TGG - chr7_2:59410046-59410065 Msa1065610:CDS 45.0%
AGAGCTTGAGAGATGGAATG+AGG - chr7_2:59410053-59410072 Msa1065610:CDS 45.0%
GAGAGATGGAATGAGGAGTT+TGG - chr7_2:59410060-59410079 Msa1065610:CDS 45.0%
!! GACAAGGGCACCAAAGTTTA+TGG - chr7_2:59410174-59410193 Msa1065610:five_prime_UTR 45.0%
!!! TTTTATTTTATTTTTAAGAA+TGG + chr7_2:59404836-59404855 None:intergenic 5.0%
GCTGTTAGGGCTGAAGAATG+GGG - chr7_2:59405198-59405217 Msa1065610:intron 50.0%
TAGGGCTGAAGAATGGGGTT+TGG - chr7_2:59405203-59405222 Msa1065610:intron 50.0%
GGCAAATGAGCTACCTGGAA+TGG + chr7_2:59406514-59406533 None:intergenic 50.0%
AGCAGTTTGTGCACGGTTTG+AGG + chr7_2:59406753-59406772 None:intergenic 50.0%
GAACTGCAGCAGTTTGTGCA+CGG + chr7_2:59406760-59406779 None:intergenic 50.0%
ACATCGTCCCATCGAACAGA+AGG + chr7_2:59406944-59406963 None:intergenic 50.0%
TCTGTTCGATGGGACGATGT+TGG - chr7_2:59406944-59406963 Msa1065610:CDS 50.0%
TTATCGAAATCCAGGTGGCC+TGG - chr7_2:59407025-59407044 Msa1065610:intron 50.0%
AAATCCAGGTGGCCTGGAAA+AGG - chr7_2:59407031-59407050 Msa1065610:intron 50.0%
!! ACCAGCTAGAGGTATTGCCT+TGG - chr7_2:59407124-59407143 Msa1065610:intron 50.0%
TCCAAGGCAATACCTCTAGC+TGG + chr7_2:59407128-59407147 None:intergenic 50.0%
GCCTTGGAACCTTGTCTCTT+TGG - chr7_2:59407140-59407159 Msa1065610:intron 50.0%
CCCAAAGAGACAAGGTTCCA+AGG + chr7_2:59407144-59407163 None:intergenic 50.0%
TTATAGCAGGAGTAGGGGGT+GGG + chr7_2:59407572-59407591 None:intergenic 50.0%
TTTATAGCAGGAGTAGGGGG+TGG + chr7_2:59407573-59407592 None:intergenic 50.0%
TGGATGTCACCCCATCAAAC+TGG + chr7_2:59408252-59408271 None:intergenic 50.0%
TTAGAGCAGCCGAGTTCTTC+TGG + chr7_2:59408617-59408636 None:intergenic 50.0%
AGGTGCAACCAATAAGCCAC+AGG - chr7_2:59408964-59408983 Msa1065610:intron 50.0%
ACGGCATCATCCAATTCCTG+TGG + chr7_2:59408983-59409002 None:intergenic 50.0%
TGATGCCGTTCTTAGGAGAC+TGG - chr7_2:59408994-59409013 Msa1065610:intron 50.0%
AGCACGTCGCTTACTAGGTA+AGG + chr7_2:59409346-59409365 None:intergenic 50.0%
!! ATATTCTTGGAGGCACCGGA+AGG - chr7_2:59409399-59409418 Msa1065610:intron 50.0%
TCTCACCGTCAAGGCAAATC+AGG - chr7_2:59409844-59409863 Msa1065610:CDS 50.0%
! GCATGCCTGATTTGCCTTGA+CGG + chr7_2:59409852-59409871 None:intergenic 50.0%
CATACCTCAGTCCTCTTACC+TGG + chr7_2:59409975-59409994 None:intergenic 50.0%
GGTAAGAGGACTGAGGTATG+AGG - chr7_2:59409975-59409994 Msa1065610:CDS 50.0%
CCATTCAAGGCTGTATTGCC+AGG + chr7_2:59410283-59410302 None:intergenic 50.0%
CCTGGCAATACAGCCTTGAA+TGG - chr7_2:59410280-59410299 Msa1065610:five_prime_UTR 50.0%
CGCGTCGCGTATAAGCTGAA+AGG - chr7_2:59405141-59405160 Msa1065610:CDS 55.0%
! TTTGCCTTTTCCAGGCCACC+TGG + chr7_2:59407038-59407057 None:intergenic 55.0%
GGTCTTCGAAGACCAGCTAG+AGG - chr7_2:59407113-59407132 Msa1065610:intron 55.0%
TTGCTTCTCTTTGGTCCGCC+TGG - chr7_2:59407241-59407260 Msa1065610:intron 55.0%
CTCTTTGGTCCGCCTGGTAA+TGG - chr7_2:59407247-59407266 Msa1065610:intron 55.0%
GACCATGCTTGCCAAAGCAG+TGG - chr7_2:59407273-59407292 Msa1065610:intron 55.0%
AGCCACTGCTTTGGCAAGCA+TGG + chr7_2:59407278-59407297 None:intergenic 55.0%
TATAGCAGGAGTAGGGGGTG+GGG + chr7_2:59407571-59407590 None:intergenic 55.0%
CAGGCTCTCAGTAGACGAGC+AGG - chr7_2:59406384-59406403 Msa1065610:intron 60.0%
ATAGCAGGAGTAGGGGGTGG+GGG + chr7_2:59407570-59407589 None:intergenic 60.0%
!! TTCTTGGAGGCACCGGAAGG+CGG - chr7_2:59409402-59409421 Msa1065610:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 59404788 59410364 59404788 ID=Msa1065610;Name=Msa1065610
chr7_2 mRNA 59404788 59410364 59404788 ID=Msa1065610-mRNA-1;Parent=Msa1065610;Name=Msa1065610-mRNA-1;_AED=0.09;_eAED=0.09;_QI=209|0.91|0.92|1|0.91|0.92|13|272|480
chr7_2 exon 59404788 59405176 59404788 ID=Msa1065610-mRNA-1:exon:11436;Parent=Msa1065610-mRNA-1
chr7_2 exon 59405302 59405384 59405302 ID=Msa1065610-mRNA-1:exon:11435;Parent=Msa1065610-mRNA-1
chr7_2 exon 59405526 59405561 59405526 ID=Msa1065610-mRNA-1:exon:11434;Parent=Msa1065610-mRNA-1
chr7_2 exon 59405801 59405891 59405801 ID=Msa1065610-mRNA-1:exon:11433;Parent=Msa1065610-mRNA-1
chr7_2 exon 59406137 59406186 59406137 ID=Msa1065610-mRNA-1:exon:11432;Parent=Msa1065610-mRNA-1
chr7_2 exon 59406854 59406977 59406854 ID=Msa1065610-mRNA-1:exon:11431;Parent=Msa1065610-mRNA-1
chr7_2 exon 59407613 59407693 59407613 ID=Msa1065610-mRNA-1:exon:11430;Parent=Msa1065610-mRNA-1
chr7_2 exon 59407798 59407913 59407798 ID=Msa1065610-mRNA-1:exon:11429;Parent=Msa1065610-mRNA-1
chr7_2 exon 59408018 59408113 59408018 ID=Msa1065610-mRNA-1:exon:11428;Parent=Msa1065610-mRNA-1
chr7_2 exon 59408187 59408406 59408187 ID=Msa1065610-mRNA-1:exon:11427;Parent=Msa1065610-mRNA-1
chr7_2 exon 59408613 59408632 59408613 ID=Msa1065610-mRNA-1:exon:11426;Parent=Msa1065610-mRNA-1
chr7_2 exon 59408747 59408838 59408747 ID=Msa1065610-mRNA-1:exon:11425;Parent=Msa1065610-mRNA-1
chr7_2 exon 59409839 59410364 59409839 ID=Msa1065610-mRNA-1:exon:11424;Parent=Msa1065610-mRNA-1
chr7_2 five_prime_UTR 59410156 59410364 59410156 ID=Msa1065610-mRNA-1:five_prime_utr;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59409839 59410155 59409839 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59408747 59408838 59408747 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59408613 59408632 59408613 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59408187 59408406 59408187 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59408018 59408113 59408018 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59407798 59407913 59407798 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59407613 59407693 59407613 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59406854 59406977 59406854 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59406137 59406186 59406137 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59405801 59405891 59405801 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59405526 59405561 59405526 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59405302 59405384 59405302 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 CDS 59405060 59405176 59405060 ID=Msa1065610-mRNA-1:cds;Parent=Msa1065610-mRNA-1
chr7_2 three_prime_UTR 59404788 59405059 59404788 ID=Msa1065610-mRNA-1:three_prime_utr;Parent=Msa1065610-mRNA-1
Gene Sequence

>Msa1065610

ATGAGTTTTTTGCAGGGAATCATTGATTCCTTTAACTCTGTTTTCTCTCCTCAATCTTCTTCTTCTTCTTCTTCTCAAACCAATTTCAGTGCTTCTTCAATGGAAGCTTCACCTTCTTCTCCTTCTTCTTCGGTTTCAAACGAACGCGTCGCGTATAAGCTGAAAGGCTACTACGATTTAGCAACACAAGAGATCGATAAAGCTGTTAGGGCTGAAGAATGGGGTTTGGTCGATGACGCTATTCTTCACTACAGGAATGCTCATAGGATCCTACTTGAAGCTAATTCTACACCTGTTCCTTCATTCATCACTCCTAGTGAGAAACAGAAAGTACAATCATATCGTCAAAAGATATCAAAATGGCAGGGACAAGTTTCTGAGAGATTGCAGGCTCTCAGTAGACGAGCAGGTAGCTCATTTGCCAATCAGAGCACCTCAAACCGTGCACAAACTGCTGCAGTTCCAACTAAACTATCAAATACTACAAAAAAAGTGCTACAAAAGAATCCTCAAAGAAAAGATGAGGTGAATAAAGTTCAAAGCCCGAAACCTAGTCAAACATCTGGTGAAAATTATGATACGAAACTGGTTGAAATGATTAACACTGCCATTGTAGATAGAAGTCCTTCTGTTCGATGGGACGATGTTGGTGGCCTGGAAAAGGCAAAGCAAGCTTTAATGGAGATGGTTATTTTGCCAACAAAGAGAAGAGACTTGTTCACTGGTCTTCGAAGACCAGCTAGAGGTTTGCTTCTCTTTGGTCCGCCTGGTAATGGTAAGACCATGCTTGCCAAAGCAGTGGCTTCAGAATCAGAAGCAACATTTTTTAATGTCACGGCAGCTTCCTTGACGTCAAAATGGGTGGGTGAAGCTGAAAAGCTTGTACGGACACTATTCATGGTAGCTGTATCGAGACAGCCATCTGTAATTTTCATTGATGAGATTGATAGTATAATGTCAACAAGGACGACAAATGAAAATGAGGCCAGCAGACGATTAAAATCTGAATTCCTTATCCAGTTTGATGGGGTGACATCCAATCCTGATGACATTGTGATTGTAATTGGTGCAACCAATAAGCCACAGGAATTGGATGATGCCGTTCTTAGGAGACTGGTTAAGAGAATATATGTACCTTTACCAAATGAAAATGTTAGGAAACTTCTGCTAAAACACAAACTCAAGGGTCAAGCGTTCTCCTTACCTAGTAGAGATCTAGAGATGCTGGTAAAAGAAACCGAAGGATACTCTGGAAGTGATCTGCAAGCCTTGTGTGAAGAAGCTGCAATGATGCCAATTAGAGAGCTGGGTTCTAACATTCTCACCGTAAGAGGACTGAGGTATGAGGACTTCAAGAAAGCAATGGCTGTGATCAGACCAAGTTTAAACAAAAGTAAATGGGAAGAGCTTGAGAGATGGAATGAGGAGTTTGGTTCAAATTGA

Protein sequence

>Msa1065610

MSFLQGIIDSFNSVFSPQSSSSSSSQTNFSASSMEASPSSPSSSVSNERVAYKLKGYYDLATQEIDKAVRAEEWGLVDDAILHYRNAHRILLEANSTPVPSFITPSEKQKVQSYRQKISKWQGQVSERLQALSRRAGSSFANQSTSNRAQTAAVPTKLSNTTKKVLQKNPQRKDEVNKVQSPKPSQTSGENYDTKLVEMINTAIVDRSPSVRWDDVGGLEKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVTAASLTSKWVGEAEKLVRTLFMVAVSRQPSVIFIDEIDSIMSTRTTNENEASRRLKSEFLIQFDGVTSNPDDIVIVIGATNKPQELDDAVLRRLVKRIYVPLPNENVRKLLLKHKLKGQAFSLPSRDLEMLVKETEGYSGSDLQALCEEAAMMPIRELGSNILTVRGLRYEDFKKAMAVIRPSLNKSKWEELERWNEEFGSN*