AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1111180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111180 MtrunA17_Chr7g0246111 91.120 518 5 6 1 489 1 506 0.0 927
Msa1111180 MtrunA17_Chr6g0459561 48.013 302 143 6 197 488 362 659 2.59e-93 296
Msa1111180 MtrunA17_Chr6g0459541 44.308 325 134 7 203 488 28 344 3.27e-88 274
Msa1111180 MtrunA17_Chr4g0026631 42.769 325 145 5 200 487 110 430 1.65e-77 249
Msa1111180 MtrunA17_Chr2g0321241 42.593 324 145 5 201 487 116 435 2.23e-77 249
Msa1111180 MtrunA17_Chr6g0459551 38.889 378 170 11 151 486 44 402 7.73e-77 247
Msa1111180 MtrunA17_Chr4g0004121 38.021 384 209 8 125 488 154 528 6.87e-75 245
Msa1111180 MtrunA17_Chr4g0052271 50.400 250 117 4 202 449 104 348 3.76e-74 239
Msa1111180 MtrunA17_Chr4g0038101 43.860 285 142 6 217 487 721 1001 1.46e-68 237
Msa1111180 MtrunA17_Chr5g0397121 42.122 311 131 9 217 487 513 814 7.71e-68 233
Msa1111180 MtrunA17_Chr6g0459531 40.339 295 137 5 203 488 53 317 1.02e-67 220
Msa1111180 MtrunA17_Chr6g0462581 40.984 305 141 7 217 487 500 799 8.25e-65 224
Msa1111180 MtrunA17_Chr3g0127401 40.645 310 163 7 167 468 40 336 1.42e-63 211
Msa1111180 MtrunA17_Chr8g0387641 39.441 322 135 8 217 487 521 833 1.44e-63 221
Msa1111180 MtrunA17_Chr1g0195731 41.892 296 143 7 217 487 934 1225 3.56e-63 222
Msa1111180 MtrunA17_Chr1g0195741 41.216 296 145 7 217 487 938 1229 2.28e-62 220
Msa1111180 MtrunA17_Chr3g0127431 41.281 281 150 6 167 445 43 310 1.19e-61 206
Msa1111180 MtrunA17_Chr1g0202371 38.312 308 149 5 216 487 396 698 2.79e-60 210
Msa1111180 MtrunA17_Chr3g0116131 41.946 298 140 7 217 487 902 1193 5.01e-60 213
Msa1111180 MtrunA17_Chr1g0202381 41.034 290 148 7 168 445 416 694 1.35e-59 209
Msa1111180 MtrunA17_Chr1g0204031 47.414 232 114 4 217 445 557 783 1.41e-58 207
Msa1111180 MtrunA17_Chr1g0192151 34.932 292 161 9 189 464 130 408 1.26e-46 167
Msa1111180 MtrunA17_Chr4g0014731 34.932 292 161 9 189 464 131 409 1.36e-46 167
Msa1111180 MtrunA17_Chr7g0255721 39.015 264 140 9 215 470 683 933 2.15e-46 173
Msa1111180 MtrunA17_Chr7g0255721 32.589 224 143 4 222 443 391 608 1.02e-23 105
Msa1111180 MtrunA17_Chr1g0180791 39.194 273 146 6 212 470 200 466 1.06e-45 170
Msa1111180 MtrunA17_Chr1g0180791 38.136 236 134 6 215 444 476 705 2.76e-44 166
Msa1111180 MtrunA17_Chr3g0145011 37.367 281 153 9 216 489 138 402 5.30e-45 162
Msa1111180 MtrunA17_Chr7g0264521 38.828 273 147 6 212 470 201 467 6.85e-45 168
Msa1111180 MtrunA17_Chr7g0264521 38.559 236 133 6 215 444 477 706 1.74e-44 167
Msa1111180 MtrunA17_Chr2g0327121 38.136 236 134 6 215 444 478 707 5.35e-44 165
Msa1111180 MtrunA17_Chr2g0327121 41.772 237 127 6 212 444 202 431 3.90e-42 160
Msa1111180 MtrunA17_Chr3g0141901 37.276 279 152 9 216 487 135 397 9.73e-44 159
Msa1111180 MtrunA17_Chr4g0050561 36.000 275 153 9 200 465 139 399 3.18e-43 158
Msa1111180 MtrunA17_Chr7g0255641 37.037 270 145 9 215 474 656 910 5.62e-42 160
Msa1111180 MtrunA17_Chr7g0255641 32.258 279 163 8 218 479 394 663 4.95e-27 115
Msa1111180 MtrunA17_Chr7g0262801 35.472 265 153 7 205 463 175 427 1.12e-39 149
Msa1111180 MtrunA17_Chr1g0182711 35.094 265 154 7 205 463 176 428 1.27e-39 149
Msa1111180 MtrunA17_Chr7g0255901 31.858 339 193 11 166 486 601 919 3.14e-39 152
Msa1111180 MtrunA17_Chr2g0277831 35.484 279 162 7 215 481 531 803 6.50e-39 150
Msa1111180 MtrunA17_Chr2g0277831 29.276 304 162 10 219 479 245 538 8.29e-28 117
Msa1111180 MtrunA17_Chr4g0033451 34.296 277 159 7 216 474 379 650 4.15e-36 142
Msa1111180 MtrunA17_Chr3g0108321 39.487 195 107 5 215 403 157 346 1.03e-34 133
Msa1111180 MtrunA17_Chr8g0345461 33.469 245 149 7 206 443 154 391 3.45e-34 133
Msa1111180 MtrunA17_Chr2g0316851 35.193 233 138 5 219 443 596 823 7.70e-34 136
Msa1111180 MtrunA17_Chr3g0086411 34.737 285 152 11 215 473 213 489 1.11e-33 133
Msa1111180 MtrunA17_Chr3g0086411 28.696 230 117 8 304 489 7 233 4.91e-14 74.3
Msa1111180 MtrunA17_Chr3g0135721 35.632 261 151 9 216 470 223 472 1.59e-33 134
Msa1111180 MtrunA17_Chr5g0432631 33.824 272 162 9 206 470 217 477 2.01e-33 134
Msa1111180 MtrunA17_Chr8g0362771 36.957 230 130 9 216 439 236 456 4.13e-33 133
Msa1111180 MtrunA17_Chr7g0255651 35.593 236 140 6 215 444 280 509 6.11e-33 132
Msa1111180 MtrunA17_Chr7g0255651 30.000 280 166 11 224 487 24 289 1.21e-14 76.6
Msa1111180 MtrunA17_Chr7g0255691 32.526 289 188 5 160 444 228 513 3.71e-32 129
Msa1111180 MtrunA17_Chr7g0255691 33.449 287 159 12 220 487 20 293 2.36e-25 109
Msa1111180 MtrunA17_Chr1g0200081 33.469 245 148 8 206 443 164 400 4.48e-32 127
Msa1111180 MtrunA17_Chr4g0043381 31.596 307 186 8 196 486 810 1108 5.32e-32 130
Msa1111180 MtrunA17_Chr4g0052411 36.325 234 136 7 216 443 228 454 1.09e-31 129
Msa1111180 MtrunA17_Chr2g0297281 36.325 234 136 7 216 443 285 511 2.24e-31 128
Msa1111180 MtrunA17_Chr2g0327231 35.602 191 120 2 193 382 322 510 2.94e-31 126
Msa1111180 MtrunA17_Chr2g0327231 41.053 95 51 2 212 305 148 238 1.35e-14 76.3
Msa1111180 MtrunA17_Chr7g0217421 35.897 234 137 7 216 443 38 264 3.33e-31 124
Msa1111180 MtrunA17_Chr6g0456351 35.745 235 141 6 213 443 313 541 5.43e-31 126
Msa1111180 MtrunA17_Chr3g0143721 35.897 234 137 7 216 443 248 474 7.75e-31 126
Msa1111180 MtrunA17_Chr3g0135761 34.363 259 153 9 218 470 223 470 1.20e-30 125
Msa1111180 MtrunA17_Chr6g0476861 35.124 242 139 8 212 443 192 425 5.63e-30 124
Msa1111180 MtrunA17_Chr7g0260601 34.711 242 140 8 212 443 235 468 1.69e-29 122
Msa1111180 MtrunA17_Chr3g0086401 30.000 300 174 8 215 486 383 674 3.12e-29 121
Msa1111180 MtrunA17_Chr3g0086401 31.183 279 143 9 251 486 128 400 5.80e-25 108
Msa1111180 MtrunA17_Chr3g0104211 35.124 242 141 8 212 444 299 533 6.91e-29 120
Msa1111180 MtrunA17_Chr7g0248361 34.855 241 131 9 217 443 192 420 1.48e-28 119
Msa1111180 MtrunA17_Chr5g0429571 29.480 346 193 10 143 444 204 542 4.18e-28 118
Msa1111180 MtrunA17_Chr4g0031821 34.599 237 137 8 217 443 320 548 5.19e-28 118
Msa1111180 MtrunA17_Chr2g0331161 31.183 279 171 8 211 479 409 676 4.26e-27 115
Msa1111180 MtrunA17_Chr2g0289231 29.412 306 191 9 146 437 224 518 8.40e-27 114
Msa1111180 MtrunA17_Chr1g0158881 33.594 256 158 8 219 471 331 577 1.31e-26 114
Msa1111180 MtrunA17_Chr5g0432641 33.480 227 141 6 216 439 190 409 1.47e-26 113
Msa1111180 MtrunA17_Chr8g0388371 33.074 257 149 8 209 450 396 644 2.03e-26 113
Msa1111180 MtrunA17_Chr3g0094871 33.333 237 141 8 216 443 10 238 1.07e-25 109
Msa1111180 MtrunA17_Chr3g0129971 36.402 239 137 8 216 444 295 528 1.46e-25 110
Msa1111180 MtrunA17_Chr3g0135781 38.554 166 93 5 216 379 54 212 3.46e-25 103
Msa1111180 MtrunA17_Chr4g0047411 31.783 258 141 12 251 482 211 459 1.15e-20 95.5
Msa1111180 MtrunA17_Chr8g0357301 33.333 201 117 8 253 443 506 699 3.90e-17 84.7
Msa1111180 MtrunA17_Chr4g0062081 43.590 78 42 2 221 296 11 88 8.42e-14 67.4
Msa1111180 MtrunA17_Chr1g0168321 26.800 250 124 9 207 443 152 355 1.70e-12 69.7
Msa1111180 MtrunA17_Chr1g0190401 26.804 194 129 7 213 399 673 860 3.83e-11 65.9
Msa1111180 MtrunA17_Chr4g0039781 31.544 149 96 3 252 400 368 510 6.35e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111180 AT2G45500.1 69.323 502 130 5 1 489 1 491 0.0 668
Msa1111180 AT2G45500.2 69.461 501 127 6 1 489 1 487 0.0 660
Msa1111180 AT2G45500.5 69.461 501 127 6 1 489 11 497 0.0 659
Msa1111180 AT2G45500.4 82.792 308 45 2 187 489 50 354 0.0 520
Msa1111180 AT2G45500.3 82.792 308 45 2 187 489 50 354 0.0 520
Msa1111180 AT3G27120.1 49.338 302 139 6 197 488 380 677 5.18e-94 299
Msa1111180 AT2G27600.1 42.769 325 145 5 200 487 112 432 2.24e-77 249
Msa1111180 AT1G80350.1 43.590 312 153 6 196 488 215 522 5.02e-76 248
Msa1111180 AT2G34560.1 43.046 302 151 6 202 488 85 380 1.95e-72 234
Msa1111180 AT2G34560.2 43.046 302 151 6 202 488 94 389 2.33e-72 234
Msa1111180 AT1G50140.3 42.633 319 158 9 187 487 680 991 4.05e-69 238
Msa1111180 AT1G50140.1 42.633 319 158 9 187 487 680 991 4.05e-69 238
Msa1111180 AT1G50140.4 42.633 319 158 9 187 487 680 991 4.05e-69 238
Msa1111180 AT1G50140.2 42.633 319 158 9 187 487 658 969 4.46e-69 238
Msa1111180 AT1G50140.5 42.633 319 158 9 187 487 658 969 4.46e-69 238
Msa1111180 AT3G19740.1 41.693 319 161 9 187 487 670 981 2.45e-68 236
Msa1111180 AT4G27680.1 40.864 301 161 6 173 465 42 333 8.96e-66 218
Msa1111180 AT1G64110.2 41.558 308 135 9 216 487 517 815 1.72e-65 226
Msa1111180 AT1G64110.4 41.558 308 135 9 216 487 517 815 1.72e-65 226
Msa1111180 AT1G64110.5 41.558 308 135 9 216 487 515 813 1.86e-65 226
Msa1111180 AT1G64110.3 41.558 308 135 9 216 487 515 813 1.86e-65 226
Msa1111180 AT1G64110.1 41.558 308 135 9 216 487 512 810 2.05e-65 226
Msa1111180 AT4G02480.1 42.230 296 142 6 217 487 960 1251 3.44e-64 226
Msa1111180 AT5G53540.1 40.199 301 163 6 173 465 45 336 5.87e-64 213
Msa1111180 AT4G28000.2 40.065 307 143 7 217 487 517 818 7.08e-64 222
Msa1111180 AT4G28000.1 40.065 307 143 7 217 487 515 816 7.35e-64 222
Msa1111180 AT5G52882.1 39.739 307 144 6 217 487 514 815 1.56e-63 221
Msa1111180 AT4G28000.3 46.753 231 116 4 217 445 517 742 3.71e-63 219
Msa1111180 AT4G24860.3 46.311 244 124 4 205 445 803 1042 2.18e-62 220
Msa1111180 AT4G24860.2 46.311 244 124 4 205 445 801 1040 2.23e-62 220
Msa1111180 AT4G24860.1 46.311 244 124 4 205 445 805 1044 2.44e-62 220
Msa1111180 AT4G24860.4 46.311 244 124 4 205 445 778 1017 2.46e-62 220
Msa1111180 AT1G02890.1 41.892 296 143 6 217 487 941 1232 1.79e-61 218
Msa1111180 AT1G62130.1 36.824 296 148 7 216 487 749 1029 9.36e-48 177
Msa1111180 AT1G62130.2 36.824 296 148 7 216 487 742 1022 1.02e-47 177
Msa1111180 AT1G02890.2 36.824 296 130 6 217 487 941 1204 1.01e-46 174
Msa1111180 AT3G56690.1 39.085 284 150 9 196 470 700 969 1.06e-46 174
Msa1111180 AT3G56690.1 35.714 224 137 3 222 443 387 605 6.61e-33 133
Msa1111180 AT3G05530.1 31.347 386 214 12 107 464 47 409 3.33e-46 166
Msa1111180 AT1G09100.1 34.932 292 161 9 189 464 130 408 6.04e-46 166
Msa1111180 AT3G09840.1 37.329 292 161 7 212 487 199 484 2.85e-44 167
Msa1111180 AT3G09840.1 38.819 237 132 6 215 444 475 705 3.59e-42 160
Msa1111180 AT5G03340.1 38.462 273 148 6 212 470 199 465 3.67e-44 166
Msa1111180 AT5G03340.1 38.983 236 132 6 215 444 475 704 2.30e-43 164
Msa1111180 AT5G43010.1 37.367 281 149 10 216 487 135 397 4.09e-44 160
Msa1111180 AT1G45000.1 37.276 279 152 9 216 487 135 397 5.02e-44 160
Msa1111180 AT3G53230.1 38.095 273 149 6 212 470 200 466 8.78e-44 165
Msa1111180 AT3G53230.1 38.559 236 133 6 215 444 476 705 6.14e-43 163
Msa1111180 AT5G19990.1 36.364 275 152 9 200 465 141 401 1.88e-42 156
Msa1111180 AT5G19990.3 36.364 275 152 9 200 465 141 401 1.88e-42 156
Msa1111180 AT5G20000.1 36.364 275 152 9 200 465 141 401 2.11e-42 156
Msa1111180 AT5G19990.2 36.364 275 152 9 200 465 83 343 2.11e-42 154
Msa1111180 AT1G03000.1 35.052 291 163 7 215 486 653 936 4.03e-41 158
Msa1111180 AT4G29040.1 36.226 265 151 7 205 463 173 425 8.04e-41 152
Msa1111180 AT2G20140.1 36.226 265 151 7 205 463 173 425 1.46e-40 151
Msa1111180 AT3G01610.1 36.496 274 154 8 215 475 523 789 1.61e-39 153
Msa1111180 AT3G01610.1 29.642 307 183 8 163 445 168 465 1.91e-26 114
Msa1111180 AT3G01610.2 36.496 274 154 8 215 475 523 789 1.73e-39 152
Msa1111180 AT3G01610.2 29.642 307 183 8 163 445 168 465 2.21e-26 113
Msa1111180 AT5G58290.1 37.288 236 136 6 215 444 150 379 5.51e-39 146
Msa1111180 AT3G15120.2 35.776 232 136 5 219 442 728 954 1.58e-35 141
Msa1111180 AT3G15120.1 35.776 232 136 5 219 442 718 944 1.61e-35 141
Msa1111180 AT2G03670.1 34.386 285 167 9 206 483 272 543 3.08e-34 136
Msa1111180 AT2G03670.1 35.461 282 153 12 221 487 23 290 3.56e-32 130
Msa1111180 AT1G05910.1 33.813 278 157 9 217 474 378 648 4.78e-34 137
Msa1111180 AT1G53750.1 33.469 245 149 7 206 443 154 391 6.41e-34 133
Msa1111180 AT3G02450.1 36.735 245 137 8 213 449 327 561 4.12e-33 133
Msa1111180 AT2G03670.2 35.461 282 153 12 221 487 23 290 5.19e-33 130
Msa1111180 AT2G03670.2 41.176 153 82 3 206 353 272 421 1.87e-21 97.1
Msa1111180 AT1G06430.1 36.325 234 136 7 216 443 216 442 1.09e-31 129
Msa1111180 AT1G06430.3 36.325 234 136 7 216 443 216 442 1.09e-31 129
Msa1111180 AT1G06430.2 36.325 234 136 7 216 443 216 442 1.09e-31 129
Msa1111180 AT2G30950.4 35.897 234 137 7 216 443 227 453 1.42e-31 129
Msa1111180 AT2G30950.1 35.897 234 137 7 216 443 223 449 1.50e-31 129
Msa1111180 AT2G30950.2 35.897 234 137 7 216 443 223 449 1.50e-31 129
Msa1111180 AT2G30950.3 35.897 234 137 7 216 443 223 449 1.50e-31 129
Msa1111180 AT5G42270.1 36.752 234 135 7 216 443 246 472 2.09e-31 128
Msa1111180 AT2G26140.1 34.749 259 156 8 216 470 223 472 2.85e-31 128
Msa1111180 AT1G50250.1 35.897 234 137 7 216 443 258 484 9.20e-31 126
Msa1111180 AT1G53780.2 32.377 244 151 7 206 442 347 583 1.01e-30 126
Msa1111180 AT1G53780.1 32.377 244 151 7 206 442 326 562 1.19e-30 125
Msa1111180 AT1G53780.4 32.377 244 151 7 206 442 326 562 1.19e-30 125
Msa1111180 AT1G53780.3 32.377 244 151 7 206 442 325 561 1.22e-30 125
Msa1111180 AT1G07510.1 34.979 243 140 8 217 449 324 558 2.66e-30 125
Msa1111180 AT5G08470.3 35.065 231 137 6 219 444 834 1056 2.70e-30 125
Msa1111180 AT5G08470.1 35.065 231 137 6 219 444 843 1065 2.89e-30 125
Msa1111180 AT2G29080.1 34.310 239 146 6 217 449 319 552 6.39e-30 124
Msa1111180 AT3G47060.1 29.484 407 224 13 87 449 169 556 1.31e-29 123
Msa1111180 AT5G15250.1 34.199 231 145 5 216 443 220 446 2.20e-29 122
Msa1111180 AT5G53170.1 34.884 258 152 9 219 471 361 607 1.55e-28 120
Msa1111180 AT5G58870.1 30.606 330 180 10 158 444 232 555 7.69e-28 118
Msa1111180 AT4G23940.1 35.547 256 144 7 209 450 419 667 9.23e-28 118
Msa1111180 AT5G15250.2 32.016 253 144 7 216 443 220 469 1.21e-26 113
Msa1111180 AT5G64580.1 32.203 295 167 9 160 444 274 545 2.92e-26 113
Msa1111180 AT4G04180.1 31.092 238 141 8 212 437 311 537 8.48e-25 108
Msa1111180 AT4G04180.2 31.092 238 141 8 212 437 306 532 8.89e-25 108
Msa1111180 AT3G16290.1 29.930 284 172 9 211 484 401 667 8.05e-24 105
Msa1111180 AT1G45000.2 38.028 142 79 4 216 352 135 272 4.82e-23 100
Msa1111180 AT5G08470.2 36.232 138 80 3 219 353 843 975 3.36e-20 94.7
Msa1111180 AT4G04910.1 31.034 261 139 12 251 482 248 496 1.49e-19 92.4
Msa1111180 AT1G79560.1 34.300 207 119 7 253 449 526 725 1.85e-19 92.4
Msa1111180 AT1G79560.2 34.300 207 119 7 253 449 526 725 2.10e-19 92.4
Msa1111180 AT1G79560.3 34.300 207 119 7 253 449 526 725 2.34e-19 92.0
Msa1111180 AT2G18330.1 31.724 145 91 4 252 395 384 521 1.40e-11 67.4

Find 109 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATGTTTGACTAGGTTTC+GGG 0.221153 7_3:+56902108 None:intergenic
TTTCAAGGCAATATGATTTC+AGG 0.222782 7_3:+56898729 None:intergenic
AGGAGAGAAAACAGAGTTAA+AGG 0.225077 7_3:+56904051 None:intergenic
ATCCAATTCCTGTGGCTTAT+TGG 0.227753 7_3:+56899991 None:intergenic
CAGCTTCCTTGACGTCAAAA+TGG 0.244361 7_3:-56901635 Msa1111180:CDS
CAAGTTTAAACAAAAGTAAA+TGG 0.245979 7_3:-56898936 Msa1111180:CDS
CATTGAAGAAGCACTGAAAT+TGG 0.247194 7_3:+56904006 None:intergenic
CACTGTCACACACAAGATTA+TGG 0.254078 7_3:+56902674 None:intergenic
GACAAGGGCACCAAAGTTTA+TGG 0.255512 7_3:-56898790 Msa1111180:three_prime_UTR
CCAGATGTTTGACTAGGTTT+CGG 0.283554 7_3:+56902107 None:intergenic
GATGACATTGTGATTGTAAT+TGG 0.285252 7_3:-56900690 Msa1111180:intron
TTTGAGATTTATCATAGATT+TGG 0.310939 7_3:+56904215 None:intergenic
AAAGGCAAAGCAAGCTTTAA+TGG 0.312478 7_3:-56901918 Msa1111180:CDS
AGGTAGCTCATTTGCCAATC+AGG 0.328156 7_3:-56902449 Msa1111180:intron
AATTGGATGATGCCGTTCTT+AGG 0.330851 7_3:-56899976 Msa1111180:CDS
GTAGTATTTGATAGTTTAGT+TGG 0.333617 7_3:+56902188 None:intergenic
AACAAGTCTCTTCTCTTTGT+TGG 0.337816 7_3:+56901881 None:intergenic
CTTTACCAAATGAAAATGTT+AGG 0.342458 7_3:-56899683 Msa1111180:CDS
ACCTTCTTCTCCTTCTTCTT+CGG 0.351247 7_3:-56903975 Msa1111180:CDS
ATGTTGAAACTATTTATTGA+TGG 0.354439 7_3:-56898756 Msa1111180:three_prime_UTR
AAGAAATCGATAAAGCTGTT+AGG 0.359640 7_3:-56903898 Msa1111180:CDS
TTAGAACCCAGCTCTCTAAT+TGG 0.361235 7_3:+56899146 None:intergenic
GAATTCCTTATCCAGTTTGA+TGG 0.364436 7_3:-56900729 Msa1111180:CDS
CTCTTTGGTCCGCCTGGTAA+TGG 0.372609 7_3:-56901720 Msa1111180:CDS
GAGAGATGGAATGAGGAGTT+TGG 0.374466 7_3:-56898904 Msa1111180:CDS
GCTTGTACGGACACTATTCT+TGG 0.381631 7_3:-56901491 Msa1111180:CDS
TGATTCTGAAGCCACTGCTT+TGG 0.387336 7_3:+56901683 None:intergenic
ATTTAAAACAAAGCCTTTCA+AGG 0.392962 7_3:+56898714 None:intergenic
AATTCCTTATCCAGTTTGAT+GGG 0.396055 7_3:-56900728 Msa1111180:CDS
AACCAATAAGCCACAGGAAT+TGG 0.397626 7_3:-56899993 Msa1111180:CDS
AGCTGTTAGGGCTGAAGAAT+GGG 0.399219 7_3:-56903885 Msa1111180:CDS
TAGGGCTGAAGAATGGGGTT+TGG 0.399472 7_3:-56903879 Msa1111180:CDS
CAATTTCAGTGCTTCTTCAA+TGG 0.404872 7_3:-56904005 Msa1111180:CDS
CATAAAAGTGATTATGCAAA+AGG 0.419153 7_3:+56904130 None:intergenic
TGGATGTCACCCCATCAAAC+TGG 0.427668 7_3:+56900718 None:intergenic
ACAAGTTTCTGAGAGATTGC+AGG 0.447126 7_3:-56902602 Msa1111180:CDS
TCGTTTGAAACCGAAGAAGA+AGG 0.449660 7_3:+56903965 None:intergenic
CACGTGTATGTATAATATAA+TGG 0.451025 7_3:+56898653 None:intergenic
TCACCCCATCAAACTGGATA+AGG 0.451624 7_3:+56900724 None:intergenic
AAGCTGTTAGGGCTGAAGAA+TGG 0.453233 7_3:-56903886 Msa1111180:CDS
AAATCCAGGTGGCCTGGAAA+AGG 0.456194 7_3:-56901936 Msa1111180:intron
AGCTTCCTTGACGTCAAAAT+GGG 0.456655 7_3:-56901634 Msa1111180:intron
AGAAATCGATAAAGCTGTTA+GGG 0.462705 7_3:-56903897 Msa1111180:CDS
TTGCTTCTCTTTGGTCCGCC+TGG 0.465849 7_3:-56901726 Msa1111180:CDS
AATGGCAACCATTCCATTCA+AGG 0.471071 7_3:+56898671 None:intergenic
ATCGTCAAAAGATATCAAAA+TGG 0.471460 7_3:-56902630 Msa1111180:CDS
CCATTCAAGGCTGTATTGCC+AGG 0.472571 7_3:+56898684 None:intergenic
TCAAAAGATATCAAAATGGC+AGG 0.473502 7_3:-56902626 Msa1111180:CDS
CCTGGCAATACAGCCTTGAA+TGG 0.483864 7_3:-56898684 Msa1111180:three_prime_UTR
TTCCTTCATTCATCACTCCC+AGG 0.485135 7_3:-56903790 Msa1111180:intron
TGAAATCATATTGCCTTGAA+AGG 0.485549 7_3:-56898727 Msa1111180:three_prime_UTR
CATTGCAGCTTCTTCACACA+AGG 0.491414 7_3:+56899172 None:intergenic
TTATCGAAATCCAGGTGGCC+TGG 0.491589 7_3:-56901942 Msa1111180:intron
AATGGGAAGAGCTTGAGAGA+TGG 0.492767 7_3:-56898918 Msa1111180:CDS
CCGAAACCTAGTCAAACATC+TGG 0.497956 7_3:-56902107 Msa1111180:CDS
AGCAGTTTGTGCACGGTTTG+AGG 0.498983 7_3:+56902217 None:intergenic
AATCACAATGTCATCAGGAT+TGG 0.499345 7_3:+56900698 None:intergenic
TTCACTACAGGAATGCTCAT+AGG 0.499729 7_3:-56903841 Msa1111180:CDS
TGAAAATTATGATACGAAAC+TGG 0.500786 7_3:-56902084 Msa1111180:CDS
AGCCACTGCTTTGGCAAGCA+TGG 0.503878 7_3:+56901692 None:intergenic
ATTACAATCACAATGTCATC+AGG 0.507002 7_3:+56900693 None:intergenic
ATGACGCTATTCTTCACTAC+AGG 0.510224 7_3:-56903853 Msa1111180:CDS
AATGATGCCAATTAGAGAGC+TGG 0.511129 7_3:-56899153 Msa1111180:CDS
AGCACGTCGCTTACTAGGTA+AGG 0.512942 7_3:+56899620 None:intergenic
GAGAACATAGCATACCTGAT+TGG 0.513560 7_3:+56902435 None:intergenic
AGAGCTTGAGAGATGGAATG+AGG 0.517140 7_3:-56898911 Msa1111180:CDS
AAGTTTAAACAAAAGTAAAT+GGG 0.518697 7_3:-56898935 Msa1111180:CDS
ACCGAAGAAGAAGGAGAAGA+AGG 0.522002 7_3:+56903974 None:intergenic
AGGTAGAGATCTAGAGATGC+TGG 0.523797 7_3:-56899375 Msa1111180:CDS
GCATGGTTTACAGGATACTC+TGG 0.534864 7_3:-56899209 Msa1111180:intron
CAGGCTCTCAGTAGACGAGC+AGG 0.535200 7_3:-56902583 Msa1111180:intron
ATAGAAGTCCTTCTGTTCGA+TGG 0.538003 7_3:-56902034 Msa1111180:CDS
AAAGCAAGCTTTAATGGAGA+TGG 0.543064 7_3:-56901912 Msa1111180:CDS
TCCAAGGCAATACCTCTAGC+TGG 0.549612 7_3:+56901842 None:intergenic
GGAGTGATGAATGAAGGAAC+AGG 0.553232 7_3:+56903794 None:intergenic
GGTAAGAGGACTGAGGTATG+AGG 0.557226 7_3:-56898989 Msa1111180:CDS
CACCTGGGAGTGATGAATGA+AGG 0.559377 7_3:+56903788 None:intergenic
AAGAGAAGAGACTTGTTCAC+TGG 0.560846 7_3:-56901875 Msa1111180:CDS
TCTGCTAAAACACAAACTCA+AGG 0.566087 7_3:-56899655 Msa1111180:CDS
TAGAAGTCCTTCTGTTCGAT+GGG 0.566235 7_3:-56902033 Msa1111180:CDS
AGCATGGTCTTACCATTACC+AGG 0.568160 7_3:+56901708 None:intergenic
ATGATGCCAATTAGAGAGCT+GGG 0.568226 7_3:-56899152 Msa1111180:CDS
TCTGTTCGATGGGACGATGT+TGG 0.570316 7_3:-56902023 Msa1111180:intron
GAACTGCAGCAGTTTGTGCA+CGG 0.573485 7_3:+56902210 None:intergenic
TGATGCCGTTCTTAGGAGAC+TGG 0.580216 7_3:-56899969 Msa1111180:intron
GTGAAGCTGAAAAGCTTGTA+CGG 0.588120 7_3:-56901504 Msa1111180:CDS
ACATCGTCCCATCGAACAGA+AGG 0.588663 7_3:+56902026 None:intergenic
AAGGACGACAAATGAAAATG+AGG 0.591136 7_3:-56900772 Msa1111180:CDS
AGGTGCAACCAATAAGCCAC+AGG 0.594898 7_3:-56899999 Msa1111180:CDS
CAATACAGCCTTGAATGGAA+TGG 0.604940 7_3:-56898679 Msa1111180:three_prime_UTR
CTGAAATGTAGAGCAAGACA+AGG 0.607620 7_3:-56898806 Msa1111180:three_prime_UTR
GACCATGCTTGCCAAAGCAG+TGG 0.609312 7_3:-56901694 Msa1111180:CDS
GAGTAGAACTAGCTTCGAGA+AGG 0.613002 7_3:+56903816 None:intergenic
TCATCAATGAAAATTACAGA+TGG 0.615857 7_3:+56901451 None:intergenic
GCTGTTAGGGCTGAAGAATG+GGG 0.620550 7_3:-56903884 Msa1111180:CDS
ATTCCTTATCCAGTTTGATG+GGG 0.624550 7_3:-56900727 Msa1111180:CDS
GAATCCTCAAAGAAAAGATG+AGG 0.629125 7_3:-56902147 Msa1111180:CDS
TCTCACCAGTCTCCTAAGAA+CGG 0.637516 7_3:+56899964 None:intergenic
CTGCTAAAACACAAACTCAA+GGG 0.643305 7_3:-56899654 Msa1111180:CDS
AGAAGGACTTCTATCTACAA+TGG 0.646183 7_3:+56902043 None:intergenic
CAAAAGATATCAAAATGGCA+GGG 0.647481 7_3:-56902625 Msa1111180:CDS
TGAGGACTTCAAGAAAGCAA+TGG 0.650387 7_3:-56898971 Msa1111180:CDS
ACGGCATCATCCAATTCCTG+TGG 0.676070 7_3:+56899983 None:intergenic
TGAAATGTAGAGCAAGACAA+GGG 0.680291 7_3:-56898805 Msa1111180:three_prime_UTR
GGTCTTCGAAGACCAGCTAG+AGG 0.690852 7_3:-56901854 Msa1111180:intron
TTTACCAGGTAAGAGGACTG+AGG 0.698763 7_3:-56898996 Msa1111180:intron
TTGATAGTATAATGTCAACA+AGG 0.721787 7_3:-56900791 Msa1111180:CDS
ATGCTGGTAAAAGAAACCGA+AGG 0.728590 7_3:-56899359 Msa1111180:intron
ATGGTCTTACCATTACCAGG+CGG 0.798518 7_3:+56901711 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTCAATTAAAATAAATTTA+TGG + chr7_3:56899949-56899968 None:intergenic 10.0%
!!! TTAAGGTTAATTATTTTTTT+TGG - chr7_3:56903896-56903915 Msa1111180:CDS 10.0%
!! CAAAAAATCATTTAATACAA+GGG + chr7_3:56901613-56901632 None:intergenic 15.0%
!! ACAAAAAATCATTTAATACA+AGG + chr7_3:56901614-56901633 None:intergenic 15.0%
!! TTTCATCTTCTAATTAAAAT+AGG - chr7_3:56901746-56901765 Msa1111180:intron 15.0%
!! TGTTTAATTAGTTAAATAGA+TGG - chr7_3:56902006-56902025 Msa1111180:intron 15.0%
!! ATGCAATTATAATTATTAGA+TGG - chr7_3:56902530-56902549 Msa1111180:intron 15.0%
!! TGCAATTATAATTATTAGAT+GGG - chr7_3:56902531-56902550 Msa1111180:intron 15.0%
!! CAAAAATAATGAATCATATT+TGG + chr7_3:56903683-56903702 None:intergenic 15.0%
!! AAGTTTAAACAAAAGTAAAT+GGG - chr7_3:56903981-56904000 Msa1111180:CDS 15.0%
!!! ATTAATTTTACCATAAACTT+TGG + chr7_3:56904139-56904158 None:intergenic 15.0%
!!! TTTGAGATTTATCATAGATT+TGG + chr7_3:56898704-56898723 None:intergenic 20.0%
!!! ATTTGAATGATTTGTTTATG+TGG - chr7_3:56899205-56899224 Msa1111180:intron 20.0%
!!! TTTGAATGATTTGTTTATGT+GGG - chr7_3:56899206-56899225 Msa1111180:intron 20.0%
!!! TTTTTTCATTGATTAGTTGA+AGG - chr7_3:56899245-56899264 Msa1111180:intron 20.0%
!!! TTTTTCATTGATTAGTTGAA+GGG - chr7_3:56899246-56899265 Msa1111180:intron 20.0%
!! TGATTTAATATTTGTGTTGT+TGG - chr7_3:56899301-56899320 Msa1111180:intron 20.0%
!!! CTATTATTCAACTTTGATTT+TGG + chr7_3:56899694-56899713 None:intergenic 20.0%
!!! AGTTAAAATCTCTCTATTTT+TGG - chr7_3:56899851-56899870 Msa1111180:intron 20.0%
!! GATAATAAGAATCAAACAAA+TGG + chr7_3:56900959-56900978 None:intergenic 20.0%
!! ATGAAAACTATAATTCTTTG+AGG - chr7_3:56901556-56901575 Msa1111180:intron 20.0%
!!! ATGATTTTTTGTTTAATGCT+TGG - chr7_3:56901622-56901641 Msa1111180:intron 20.0%
!!! AGTAATCTACCTTTTTTTTT+TGG + chr7_3:56901787-56901806 None:intergenic 20.0%
!! ATTTACTAAACAGAAAGAAA+AGG - chr7_3:56902029-56902048 Msa1111180:CDS 20.0%
!! TTAATATCATTTGAATGAAG+TGG + chr7_3:56902081-56902100 None:intergenic 20.0%
!! TTTAAAAGTGAAAACAAGAT+AGG + chr7_3:56902653-56902672 None:intergenic 20.0%
!!! ATATAAAAGTTTAGTATCGA+GGG + chr7_3:56903330-56903349 None:intergenic 20.0%
!!! AACTTTTATATGCATATTCT+TGG - chr7_3:56903339-56903358 Msa1111180:intron 20.0%
!! ATGCAAAAAAATTACCAATT+GGG - chr7_3:56903381-56903400 Msa1111180:intron 20.0%
!!! TTTTATTGTGTCCAAAATTT+GGG - chr7_3:56903655-56903674 Msa1111180:intron 20.0%
!!! TTCATTATTTTTGTTTTGCA+TGG - chr7_3:56903690-56903709 Msa1111180:intron 20.0%
!! ATAATTAACCTTAACAACAA+AGG + chr7_3:56903890-56903909 None:intergenic 20.0%
!!! TTATTTTTTTTGGTTTTACC+AGG - chr7_3:56903906-56903925 Msa1111180:CDS 20.0%
!!! CATTTACTTTTGTTTAAACT+TGG + chr7_3:56903982-56904001 None:intergenic 20.0%
!! CAAGTTTAAACAAAAGTAAA+TGG - chr7_3:56903980-56903999 Msa1111180:CDS 20.0%
!! ATGTTGAAACTATTTATTGA+TGG - chr7_3:56904160-56904179 Msa1111180:five_prime_UTR 20.0%
!!! AAAGGCTTTGTTTTAAATTT+AGG - chr7_3:56904207-56904226 Msa1111180:five_prime_UTR 20.0%
!!! AAGGCTTTGTTTTAAATTTA+GGG - chr7_3:56904208-56904227 Msa1111180:five_prime_UTR 20.0%
! CATAAAAGTGATTATGCAAA+AGG + chr7_3:56898789-56898808 None:intergenic 25.0%
! GTTTCTGCTATATTAATGAT+GGG - chr7_3:56899153-56899172 Msa1111180:CDS 25.0%
!!! TTTTCATTGATTAGTTGAAG+GGG - chr7_3:56899247-56899266 Msa1111180:intron 25.0%
! TTATCTTGTTAGAGTATGTT+TGG - chr7_3:56899438-56899457 Msa1111180:intron 25.0%
!! TTTTGACAAAAGCTATACTT+TGG - chr7_3:56899616-56899635 Msa1111180:intron 25.0%
! TCTTCAATTGACAGTAATTA+AGG + chr7_3:56899727-56899746 None:intergenic 25.0%
! TACAAACTTACATACGTTTA+TGG + chr7_3:56899907-56899926 None:intergenic 25.0%
! GCTAAAAGTTAATCCAATTT+CGG - chr7_3:56899980-56899999 Msa1111180:CDS 25.0%
! ATTATAACTAAGACCGAAAT+TGG + chr7_3:56899996-56900015 None:intergenic 25.0%
! AATAGCAGATTTCTGATATT+AGG - chr7_3:56900013-56900032 Msa1111180:intron 25.0%
! TATGATTAACTCACTGAATT+CGG + chr7_3:56900094-56900113 None:intergenic 25.0%
! AATTCAGTGAGTTAATCATA+AGG - chr7_3:56900094-56900113 Msa1111180:intron 25.0%
! ATTCAGTGAGTTAATCATAA+GGG - chr7_3:56900095-56900114 Msa1111180:intron 25.0%
! CAACAAAAACATAAGATCAT+AGG + chr7_3:56900207-56900226 None:intergenic 25.0%
!!! CTATGATCTTATGTTTTTGT+TGG - chr7_3:56900205-56900224 Msa1111180:intron 25.0%
! ATCGTCAAAAGATATCAAAA+TGG - chr7_3:56900286-56900305 Msa1111180:intron 25.0%
! AATTCTCGTAAAAGTCAAAA+CGG + chr7_3:56900396-56900415 None:intergenic 25.0%
! TGGAGAAAAAGGAATATTAA+TGG + chr7_3:56900662-56900681 None:intergenic 25.0%
!!! ACAAACATTTTTGGAGAAAA+AGG + chr7_3:56900673-56900692 None:intergenic 25.0%
!! GTAGTATTTGATAGTTTAGT+TGG + chr7_3:56900731-56900750 None:intergenic 25.0%
! TGAAAATTATGATACGAAAC+TGG - chr7_3:56900832-56900851 Msa1111180:intron 25.0%
!!! AGCAACATTTTTTAATGTCA+CGG - chr7_3:56901258-56901277 Msa1111180:intron 25.0%
! TCATCAATGAAAATTACAGA+TGG + chr7_3:56901468-56901487 None:intergenic 25.0%
!! ATCTGTAATTTTCATTGATG+AGG - chr7_3:56901467-56901486 Msa1111180:CDS 25.0%
!!! TTTTTGTTTAATGCTTGGTT+TGG - chr7_3:56901627-56901646 Msa1111180:intron 25.0%
! TAAGAACGTAGATGTAAAAA+TGG - chr7_3:56901685-56901704 Msa1111180:CDS 25.0%
! AAGAACGTAGATGTAAAAAT+GGG - chr7_3:56901686-56901705 Msa1111180:CDS 25.0%
!! ATCTCTTTTGATAAACTTCT+TGG - chr7_3:56901719-56901738 Msa1111180:CDS 25.0%
!! TCTCTTTTGATAAACTTCTT+GGG - chr7_3:56901720-56901739 Msa1111180:CDS 25.0%
!!! AATCTACCTTTTTTTTTTGG+TGG + chr7_3:56901784-56901803 None:intergenic 25.0%
! TGTGGAAATGATTAAAAATC+TGG + chr7_3:56901899-56901918 None:intergenic 25.0%
! TAGTGCTTGTCAAATTATAT+TGG + chr7_3:56901925-56901944 None:intergenic 25.0%
!! TTGATAGTATAATGTCAACA+AGG - chr7_3:56902125-56902144 Msa1111180:CDS 25.0%
!! TGCTCTTGTTAATCTATTTT+GGG - chr7_3:56902332-56902351 Msa1111180:intron 25.0%
! ACATAAAGTCATTTGTCAAA+GGG + chr7_3:56902388-56902407 None:intergenic 25.0%
!! TATAATTATTAGATGGGCTT+TGG - chr7_3:56902537-56902556 Msa1111180:intron 25.0%
!! ATAATTATTAGATGGGCTTT+GGG - chr7_3:56902538-56902557 Msa1111180:intron 25.0%
! TTTCATCCATCAATAAATAG+AGG + chr7_3:56902732-56902751 None:intergenic 25.0%
!! TCATACTTTTAATCCAGTAA+AGG + chr7_3:56902991-56903010 None:intergenic 25.0%
!! CTAACATTTTCATTTGGTAA+AGG + chr7_3:56903235-56903254 None:intergenic 25.0%
! CTTTACCAAATGAAAATGTT+AGG - chr7_3:56903233-56903252 Msa1111180:intron 25.0%
!! AGTTTCCTAACATTTTCATT+TGG + chr7_3:56903241-56903260 None:intergenic 25.0%
!! TATAAAAGTTTAGTATCGAG+GGG + chr7_3:56903329-56903348 None:intergenic 25.0%
! CATATAAAAGTTTAGTATCG+AGG + chr7_3:56903331-56903350 None:intergenic 25.0%
!! TTTTATATGCATATTCTTGG+AGG - chr7_3:56903342-56903361 Msa1111180:intron 25.0%
! CATGCAAAAAAATTACCAAT+TGG - chr7_3:56903380-56903399 Msa1111180:intron 25.0%
! ACAAATTATAAACTCCCAAT+TGG + chr7_3:56903398-56903417 None:intergenic 25.0%
!!! ACTTACGATTTTTTTGTTAC+AGG - chr7_3:56903521-56903540 Msa1111180:intron 25.0%
! TCAAAATCTATACTTACCTT+CGG + chr7_3:56903576-56903595 None:intergenic 25.0%
! TAAAACAAAGAAGAGAGAAA+AGG + chr7_3:56903640-56903659 None:intergenic 25.0%
!!! GTTTTATTGTGTCCAAAATT+TGG - chr7_3:56903654-56903673 Msa1111180:intron 25.0%
!!! AAAATCTTCCTTTGTTGTTA+AGG - chr7_3:56903879-56903898 Msa1111180:CDS 25.0%
!! ATTTAAAACAAAGCCTTTCA+AGG + chr7_3:56904205-56904224 None:intergenic 25.0%
! CACGTGTATGTATAATATAA+TGG + chr7_3:56904266-56904285 None:intergenic 25.0%
AAGAAATCGATAAAGCTGTT+AGG - chr7_3:56899018-56899037 Msa1111180:intron 30.0%
AGAAATCGATAAAGCTGTTA+GGG - chr7_3:56899019-56899038 Msa1111180:intron 30.0%
GGTTTCTGCTATATTAATGA+TGG - chr7_3:56899152-56899171 Msa1111180:CDS 30.0%
!! GCAAAAGCATTAATCTTGTT+AGG - chr7_3:56899323-56899342 Msa1111180:intron 30.0%
TCTTAGAGTTGTTCTTAGTT+TGG - chr7_3:56899401-56899420 Msa1111180:intron 30.0%
! AGCTTTTGTAAAAACCACTA+TGG + chr7_3:56899496-56899515 None:intergenic 30.0%
! GGTTTTTACAAAAGCTATAC+TGG - chr7_3:56899500-56899519 Msa1111180:intron 30.0%
TCGATAAAATCTCATGATCA+TGG - chr7_3:56899643-56899662 Msa1111180:CDS 30.0%
ATTACTGTCAATTGAAGACT+TGG - chr7_3:56899729-56899748 Msa1111180:intron 30.0%
AGCTTCTCAATAAGAACTTA+TGG - chr7_3:56899767-56899786 Msa1111180:intron 30.0%
!!! AGAGAGATTTTAACTTGTAC+AGG + chr7_3:56899846-56899865 None:intergenic 30.0%
ATGATTAACTCACTGAATTC+GGG + chr7_3:56900093-56900112 None:intergenic 30.0%
TCAAAAGATATCAAAATGGC+AGG - chr7_3:56900290-56900309 Msa1111180:intron 30.0%
CAAAAGATATCAAAATGGCA+GGG - chr7_3:56900291-56900310 Msa1111180:intron 30.0%
AGTCAAAACGGAATTCAAAA+AGG + chr7_3:56900384-56900403 None:intergenic 30.0%
!!! GTTTTTTCTTTTCCTCGTTT+TGG - chr7_3:56900523-56900542 Msa1111180:intron 30.0%
TCAGTGCTTCTTAAAACATA+TGG - chr7_3:56900557-56900576 Msa1111180:intron 30.0%
TACGTTTCACTGAACATTAT+TGG - chr7_3:56900612-56900631 Msa1111180:intron 30.0%
ACGTTTCACTGAACATTATT+GGG - chr7_3:56900613-56900632 Msa1111180:intron 30.0%
GATTCTTATTATCGAAATCC+AGG - chr7_3:56900966-56900985 Msa1111180:intron 30.0%
! CTGATGAACCTTTTCATTTT+AGG - chr7_3:56901166-56901185 Msa1111180:intron 30.0%
GAAGCAAACCTAAAATGAAA+AGG + chr7_3:56901177-56901196 None:intergenic 30.0%
!!! ATTTTAGGTTTGCTTCTCTT+TGG - chr7_3:56901181-56901200 Msa1111180:intron 30.0%
AACTCAACACAAACAAGTTA+GGG + chr7_3:56901327-56901346 None:intergenic 30.0%
AAACTCAACACAAACAAGTT+AGG + chr7_3:56901328-56901347 None:intergenic 30.0%
TCTCTCTCATCTATATAGAA+AGG - chr7_3:56901492-56901511 Msa1111180:CDS 30.0%
GTGCAACTCTAATTGATTAT+TGG - chr7_3:56901651-56901670 Msa1111180:CDS 30.0%
AGAACGTAGATGTAAAAATG+GGG - chr7_3:56901687-56901706 Msa1111180:CDS 30.0%
!! GTCAAATTATATTGGTCTTG+TGG + chr7_3:56901917-56901936 None:intergenic 30.0%
TATCGTAAGTGACTAGATTT+AGG + chr7_3:56901959-56901978 None:intergenic 30.0%
AATTCCTTATCCAGTTTGAT+GGG - chr7_3:56902188-56902207 Msa1111180:CDS 30.0%
ATTACAATCACAATGTCATC+AGG + chr7_3:56902226-56902245 None:intergenic 30.0%
GATGACATTGTGATTGTAAT+TGG - chr7_3:56902226-56902245 Msa1111180:intron 30.0%
TTCTCTATCTGTAATGAACA+TGG - chr7_3:56902274-56902293 Msa1111180:intron 30.0%
! GTGCTCTTGTTAATCTATTT+TGG - chr7_3:56902331-56902350 Msa1111180:intron 30.0%
CATAAAGTCATTTGTCAAAG+GGG + chr7_3:56902387-56902406 None:intergenic 30.0%
CACATAAAGTCATTTGTCAA+AGG + chr7_3:56902389-56902408 None:intergenic 30.0%
CTTTGACAAATGACTTTATG+TGG - chr7_3:56902387-56902406 Msa1111180:intron 30.0%
TGTGGTTAAAATTCTCTTCT+AGG - chr7_3:56902405-56902424 Msa1111180:intron 30.0%
GTGGTTAAAATTCTCTTCTA+GGG - chr7_3:56902406-56902425 Msa1111180:intron 30.0%
AAGATAGGAGTAAACTTTAG+AGG - chr7_3:56902589-56902608 Msa1111180:CDS 30.0%
TCATTCTGTAACGATGTTAT+AGG + chr7_3:56902622-56902641 None:intergenic 30.0%
TTACAATGGAAACCATATGT+GGG + chr7_3:56902689-56902708 None:intergenic 30.0%
ATTACAATGGAAACCATATG+TGG + chr7_3:56902690-56902709 None:intergenic 30.0%
ATATGGCCTCTATTTATTGA+TGG - chr7_3:56902723-56902742 Msa1111180:intron 30.0%
ATGGATGAAAAACTAAACTG+TGG - chr7_3:56902742-56902761 Msa1111180:intron 30.0%
ATTTCTTCATTGTCCTTTAC+TGG - chr7_3:56902975-56902994 Msa1111180:intron 30.0%
AAACAAGAAGAGAGTTAGTA+AGG + chr7_3:56903182-56903201 None:intergenic 30.0%
!!! TACACTTTTAACTTTCTACG+CGG - chr7_3:56903422-56903441 Msa1111180:intron 30.0%
!!! TTTTGTTTTGCATGGTTTAC+AGG - chr7_3:56903698-56903717 Msa1111180:intron 30.0%
GCGCAACAAAAAAATTAAAG+TGG + chr7_3:56903837-56903856 None:intergenic 30.0%
TTTCAAGGCAATATGATTTC+AGG + chr7_3:56904190-56904209 None:intergenic 30.0%
TGAAATCATATTGCCTTGAA+AGG - chr7_3:56904189-56904208 Msa1111180:five_prime_UTR 30.0%
!!! TTGTTTTAAATTTAGGGACC+TGG - chr7_3:56904214-56904233 Msa1111180:five_prime_UTR 30.0%
!!! TGATCGATGAGTTTTTTGCA+GGG - chr7_3:56898831-56898850 Msa1111180:three_prime_UTR 35.0%
AGGAGAGAAAACAGAGTTAA+AGG + chr7_3:56898868-56898887 None:intergenic 35.0%
TGAGAAGAAGAAGAAGATTG+AGG + chr7_3:56898888-56898907 None:intergenic 35.0%
!! CATTGAAGAAGCACTGAAAT+TGG + chr7_3:56898913-56898932 None:intergenic 35.0%
CAATTTCAGTGCTTCTTCAA+TGG - chr7_3:56898911-56898930 Msa1111180:CDS 35.0%
TTAGTTGAAGGGGAGAAAAA+TGG - chr7_3:56899257-56899276 Msa1111180:intron 35.0%
AAGGGGAGAAAAATGGTATA+TGG - chr7_3:56899264-56899283 Msa1111180:intron 35.0%
AGGGGAGAAAAATGGTATAT+GGG - chr7_3:56899265-56899284 Msa1111180:intron 35.0%
! TATACTGGTTGTCCTTAGTT+TGG - chr7_3:56899515-56899534 Msa1111180:intron 35.0%
TTGTCGTGTTAGAGTATGTT+TGG - chr7_3:56899552-56899571 Msa1111180:intron 35.0%
! AGCTTTTGTCAAAACCACTA+TGG + chr7_3:56899610-56899629 None:intergenic 35.0%
AGATGCAGCAAAACAAGAAT+GGG + chr7_3:56900051-56900070 None:intergenic 35.0%
AAGATGCAGCAAAACAAGAA+TGG + chr7_3:56900052-56900071 None:intergenic 35.0%
CCTTTGTCATCAAGTTACTA+AGG + chr7_3:56900178-56900197 None:intergenic 35.0%
! CCTTAGTAACTTGATGACAA+AGG - chr7_3:56900175-56900194 Msa1111180:intron 35.0%
AAGAGGAATAGGAACAAATG+AGG + chr7_3:56900437-56900456 None:intergenic 35.0%
TGGAATGGAAAAAGAGGAAT+AGG + chr7_3:56900448-56900467 None:intergenic 35.0%
! TATTCCTCTTTTTCCATTCC+AGG - chr7_3:56900447-56900466 Msa1111180:intron 35.0%
TCTCTGTAAACTGTAAGTAC+AGG - chr7_3:56900500-56900519 Msa1111180:intron 35.0%
CTCTGTAAACTGTAAGTACA+GGG - chr7_3:56900501-56900520 Msa1111180:intron 35.0%
! ATTTTGTTGAAGCCAAAACG+AGG + chr7_3:56900538-56900557 None:intergenic 35.0%
! AGGTGCTCTACAAACATTTT+TGG + chr7_3:56900682-56900701 None:intergenic 35.0%
GAATCCTCAAAGAAAAGATG+AGG - chr7_3:56900769-56900788 Msa1111180:CDS 35.0%
! TTCACCTCATCTTTTCTTTG+AGG + chr7_3:56900776-56900795 None:intergenic 35.0%
! TTTTCACCAGATGTTTGACT+AGG + chr7_3:56900818-56900837 None:intergenic 35.0%
AGAAGGACTTCTATCTACAA+TGG + chr7_3:56900876-56900895 None:intergenic 35.0%
TCTTATTATCGAAATCCAGG+TGG - chr7_3:56900969-56900988 Msa1111180:intron 35.0%
! AAAGGCAAAGCAAGCTTTAA+TGG - chr7_3:56900998-56901017 Msa1111180:intron 35.0%
! AAAGCAAGCTTTAATGGAGA+TGG - chr7_3:56901004-56901023 Msa1111180:intron 35.0%
AACAAGTCTCTTCTCTTTGT+TGG + chr7_3:56901038-56901057 None:intergenic 35.0%
TTACATAACCCAAAGAGACA+AGG + chr7_3:56901101-56901120 None:intergenic 35.0%
! AGACTTAAGAAGTGTAACCA+TGG - chr7_3:56901360-56901379 Msa1111180:intron 35.0%
TAGTGAGTACAAGTTAACCA+TGG + chr7_3:56901380-56901399 None:intergenic 35.0%
ACTTGTACTCACTACTCAAT+AGG - chr7_3:56901386-56901405 Msa1111180:intron 35.0%
AAATTTATAGCAGGAGTAGG+GGG + chr7_3:56901525-56901544 None:intergenic 35.0%
CAAATTTATAGCAGGAGTAG+GGG + chr7_3:56901526-56901545 None:intergenic 35.0%
CCAAATTTATAGCAGGAGTA+GGG + chr7_3:56901527-56901546 None:intergenic 35.0%
CTTGTTGCCAAATTTATAGC+AGG + chr7_3:56901534-56901553 None:intergenic 35.0%
ACTGCACCACCAAAAAAAAA+AGG - chr7_3:56901775-56901794 Msa1111180:intron 35.0%
AAGGACGACAAATGAAAATG+AGG - chr7_3:56902144-56902163 Msa1111180:CDS 35.0%
!! TTCAGATTTTAATCGTCTGC+TGG + chr7_3:56902170-56902189 None:intergenic 35.0%
GAATTCCTTATCCAGTTTGA+TGG - chr7_3:56902187-56902206 Msa1111180:CDS 35.0%
ATTCCTTATCCAGTTTGATG+GGG - chr7_3:56902189-56902208 Msa1111180:CDS 35.0%
AATCACAATGTCATCAGGAT+TGG + chr7_3:56902221-56902240 None:intergenic 35.0%
!! ATTAACAAGAGCACTGTTCA+TGG + chr7_3:56902325-56902344 None:intergenic 35.0%
CTGGAATTCGAAAAACTCAT+GGG - chr7_3:56902433-56902452 Msa1111180:intron 35.0%
TAAATAGAGGCCATATTCTC+AGG + chr7_3:56902719-56902738 None:intergenic 35.0%
AACTGTGGCTATTGTAAATC+TGG - chr7_3:56902757-56902776 Msa1111180:intron 35.0%
TTCCTTTCCCTTCTGAATAT+AGG - chr7_3:56902897-56902916 Msa1111180:intron 35.0%
TTCTCCACTTAAAGTCACAT+CGG + chr7_3:56903037-56903056 None:intergenic 35.0%
!!! CTTCTTGTTTTTACTGTGCT+AGG - chr7_3:56903192-56903211 Msa1111180:intron 35.0%
TCTGCTAAAACACAAACTCA+AGG - chr7_3:56903261-56903280 Msa1111180:intron 35.0%
CTGCTAAAACACAAACTCAA+GGG - chr7_3:56903262-56903281 Msa1111180:intron 35.0%
!! GATTTTGAGTCACGATGAAA+AGG - chr7_3:56903588-56903607 Msa1111180:intron 35.0%
!!! CATATTTGGTGCCCAAATTT+TGG + chr7_3:56903669-56903688 None:intergenic 35.0%
!!! TTTTGGTTTTACCAGGTAAG+AGG - chr7_3:56903913-56903932 Msa1111180:CDS 35.0%
TGAAATGTAGAGCAAGACAA+GGG - chr7_3:56904111-56904130 Msa1111180:five_prime_UTR 35.0%
!!! GTGATCGATGAGTTTTTTGC+AGG - chr7_3:56898830-56898849 Msa1111180:three_prime_UTR 40.0%
ACCTTCTTCTCCTTCTTCTT+CGG - chr7_3:56898941-56898960 Msa1111180:CDS 40.0%
! TCGTTTGAAACCGAAGAAGA+AGG + chr7_3:56898954-56898973 None:intergenic 40.0%
ATGACGCTATTCTTCACTAC+AGG - chr7_3:56899063-56899082 Msa1111180:intron 40.0%
TTCACTACAGGAATGCTCAT+AGG - chr7_3:56899075-56899094 Msa1111180:intron 40.0%
ATATAGCAGAAACCTCACCT+GGG + chr7_3:56899146-56899165 None:intergenic 40.0%
AATATAGCAGAAACCTCACC+TGG + chr7_3:56899147-56899166 None:intergenic 40.0%
GGGGAGAAAAATGGTATATG+GGG - chr7_3:56899266-56899285 Msa1111180:intron 40.0%
!! TTCTTAGTTTGGTGCTAGCT+AGG - chr7_3:56899412-56899431 Msa1111180:intron 40.0%
GATGCAGCAAAACAAGAATG+GGG + chr7_3:56900050-56900069 None:intergenic 40.0%
TAATCATAAGGGACAGCCTT+TGG - chr7_3:56900106-56900125 Msa1111180:intron 40.0%
CACTGTCACACACAAGATTA+TGG + chr7_3:56900245-56900264 None:intergenic 40.0%
! ACAAGTTTCTGAGAGATTGC+AGG - chr7_3:56900314-56900333 Msa1111180:intron 40.0%
GAGAACATAGCATACCTGAT+TGG + chr7_3:56900484-56900503 None:intergenic 40.0%
CACTGAACATTATTGGGTAC+TGG - chr7_3:56900619-56900638 Msa1111180:intron 40.0%
CAGATGTTTGACTAGGTTTC+GGG + chr7_3:56900811-56900830 None:intergenic 40.0%
CCAGATGTTTGACTAGGTTT+CGG + chr7_3:56900812-56900831 None:intergenic 40.0%
ATAGAAGTCCTTCTGTTCGA+TGG - chr7_3:56900882-56900901 Msa1111180:intron 40.0%
TAGAAGTCCTTCTGTTCGAT+GGG - chr7_3:56900883-56900902 Msa1111180:intron 40.0%
! AAGAGAAGAGACTTGTTCAC+TGG - chr7_3:56901041-56901060 Msa1111180:intron 40.0%
AGCTTCCTTGACGTCAAAAT+GGG - chr7_3:56901282-56901301 Msa1111180:intron 40.0%
!! AAGTACCCATTTTGACGTCA+AGG + chr7_3:56901290-56901309 None:intergenic 40.0%
TGTACTCACTACTCAATAGG+TGG - chr7_3:56901389-56901408 Msa1111180:intron 40.0%
GTACTCACTACTCAATAGGT+GGG - chr7_3:56901390-56901409 Msa1111180:intron 40.0%
GTGAAGCTGAAAAGCTTGTA+CGG - chr7_3:56901412-56901431 Msa1111180:intron 40.0%
CCCTACTCCTGCTATAAATT+TGG - chr7_3:56901524-56901543 Msa1111180:intron 40.0%
GCCAAATTTATAGCAGGAGT+AGG + chr7_3:56901528-56901547 None:intergenic 40.0%
ACGTAGATGTAAAAATGGGG+TGG - chr7_3:56901690-56901709 Msa1111180:CDS 40.0%
ATGTAAAAATGGGGTGGCTA+AGG - chr7_3:56901696-56901715 Msa1111180:CDS 40.0%
CTGACATTCAAAAAAGACGC+TGG + chr7_3:56901848-56901867 None:intergenic 40.0%
! AATTCTCTTCTAGGGAATGC+TGG - chr7_3:56902414-56902433 Msa1111180:intron 40.0%
GCTGGAATTCGAAAAACTCA+TGG - chr7_3:56902432-56902451 Msa1111180:intron 40.0%
TCAGTTGTATCTCCCACATA+TGG - chr7_3:56902674-56902693 Msa1111180:CDS 40.0%
TAATCTGCCTCCTGAGAATA+TGG - chr7_3:56902706-56902725 Msa1111180:intron 40.0%
CACCTATATTCAGAAGGGAA+AGG + chr7_3:56902902-56902921 None:intergenic 40.0%
GGTTGCACCTATATTCAGAA+GGG + chr7_3:56902907-56902926 None:intergenic 40.0%
TGGTTGCACCTATATTCAGA+AGG + chr7_3:56902908-56902927 None:intergenic 40.0%
AACCAATAAGCCACAGGAAT+TGG - chr7_3:56902923-56902942 Msa1111180:intron 40.0%
ATCCAATTCCTGTGGCTTAT+TGG + chr7_3:56902928-56902947 None:intergenic 40.0%
AATTGGATGATGCCGTTCTT+AGG - chr7_3:56902940-56902959 Msa1111180:intron 40.0%
ACATCGGCAATATGACATTC+TGG + chr7_3:56903021-56903040 None:intergenic 40.0%
ATTGCCGATGTGACTTTAAG+TGG - chr7_3:56903030-56903049 Msa1111180:intron 40.0%
ATGCTGGTAAAAGAAACCGA+AGG - chr7_3:56903557-56903576 Msa1111180:intron 40.0%
AATGATGCCAATTAGAGAGC+TGG - chr7_3:56903763-56903782 Msa1111180:intron 40.0%
ATGATGCCAATTAGAGAGCT+GGG - chr7_3:56903764-56903783 Msa1111180:intron 40.0%
TTAGAACCCAGCTCTCTAAT+TGG + chr7_3:56903773-56903792 None:intergenic 40.0%
TTCTAACATTCTCACCGTCA+AGG - chr7_3:56903787-56903806 Msa1111180:intron 40.0%
TGAGGACTTCAAGAAAGCAA+TGG - chr7_3:56903945-56903964 Msa1111180:CDS 40.0%
CTGAAATGTAGAGCAAGACA+AGG - chr7_3:56904110-56904129 Msa1111180:five_prime_UTR 40.0%
CAATACAGCCTTGAATGGAA+TGG - chr7_3:56904237-56904256 Msa1111180:five_prime_UTR 40.0%
AATGGCAACCATTCCATTCA+AGG + chr7_3:56904248-56904267 None:intergenic 40.0%
ACCGAAGAAGAAGGAGAAGA+AGG + chr7_3:56898945-56898964 None:intergenic 45.0%
AAGCTGTTAGGGCTGAAGAA+TGG - chr7_3:56899030-56899049 Msa1111180:intron 45.0%
AGCTGTTAGGGCTGAAGAAT+GGG - chr7_3:56899031-56899050 Msa1111180:intron 45.0%
! GAGTAGAACTAGCTTCGAGA+AGG + chr7_3:56899103-56899122 None:intergenic 45.0%
GGAGTGATGAATGAAGGAAC+AGG + chr7_3:56899125-56899144 None:intergenic 45.0%
TTCCTTCATTCATCACTCCC+AGG - chr7_3:56899126-56899145 Msa1111180:intron 45.0%
GAAATCACATTGCGCCATAG+TGG - chr7_3:56899479-56899498 Msa1111180:intron 45.0%
!! TCCTTAGTTTGGTGCTAGCT+AGG - chr7_3:56899526-56899545 Msa1111180:intron 45.0%
TCCTAGCTAGCACCAAACTA+AGG + chr7_3:56899416-56899435 None:intergenic 45.0%
GAATTCACAGTGTGCCATAG+TGG - chr7_3:56899593-56899612 Msa1111180:intron 45.0%
CACTGAATTCGGGTGCAATT+TGG + chr7_3:56900083-56900102 None:intergenic 45.0%
CTAAGCTGTCACATAGCCAA+AGG + chr7_3:56900125-56900144 None:intergenic 45.0%
GCTACCTGGAATGGAAAAAG+AGG + chr7_3:56900454-56900473 None:intergenic 45.0%
TGATTGGCAAATGAGCTACC+TGG + chr7_3:56900468-56900487 None:intergenic 45.0%
AGGTAGCTCATTTGCCAATC+AGG - chr7_3:56900467-56900486 Msa1111180:intron 45.0%
CCGAAACCTAGTCAAACATC+TGG - chr7_3:56900809-56900828 Msa1111180:intron 45.0%
!! AAGCTTGCTTTGCCTTTTCC+AGG + chr7_3:56900995-56901014 None:intergenic 45.0%
CCTTGGAACCTTGTCTCTTT+GGG - chr7_3:56901090-56901109 Msa1111180:intron 45.0%
! ATGGTCTTACCATTACCAGG+CGG + chr7_3:56901208-56901227 None:intergenic 45.0%
! AGCATGGTCTTACCATTACC+AGG + chr7_3:56901211-56901230 None:intergenic 45.0%
!! TGATTCTGAAGCCACTGCTT+TGG + chr7_3:56901236-56901255 None:intergenic 45.0%
CAGCTTCCTTGACGTCAAAA+TGG - chr7_3:56901281-56901300 Msa1111180:intron 45.0%
GCTTGTACGGACACTATTCT+TGG - chr7_3:56901425-56901444 Msa1111180:intron 45.0%
TCACCCCATCAAACTGGATA+AGG + chr7_3:56902195-56902214 None:intergenic 45.0%
GGGATTGTTCCAGAAGAACT+CGG - chr7_3:56902558-56902577 Msa1111180:intron 45.0%
!! AACTCGGCTGCTCTAAAGAT+AGG - chr7_3:56902574-56902593 Msa1111180:intron 45.0%
TCTCAGGAGGCAGATTACAA+TGG + chr7_3:56902703-56902722 None:intergenic 45.0%
ATAGAGGCCATATTCTCAGG+AGG + chr7_3:56902716-56902735 None:intergenic 45.0%
TCTCACCAGTCTCCTAAGAA+CGG + chr7_3:56902955-56902974 None:intergenic 45.0%
! AAAAGAGCACGTCGCTTACT+AGG + chr7_3:56903304-56903323 None:intergenic 45.0%
! ATGCATATTCTTGGAGGCAC+CGG - chr7_3:56903348-56903367 Msa1111180:intron 45.0%
! TTTTTGCATGTTCCGCCTTC+CGG + chr7_3:56903370-56903389 None:intergenic 45.0%
AGGTAGAGATCTAGAGATGC+TGG - chr7_3:56903541-56903560 Msa1111180:intron 45.0%
GCATGGTTTACAGGATACTC+TGG - chr7_3:56903707-56903726 Msa1111180:intron 45.0%
CATTGCAGCTTCTTCACACA+AGG + chr7_3:56903747-56903766 None:intergenic 45.0%
TTTACCAGGTAAGAGGACTG+AGG - chr7_3:56903920-56903939 Msa1111180:CDS 45.0%
AATGGGAAGAGCTTGAGAGA+TGG - chr7_3:56903998-56904017 Msa1111180:CDS 45.0%
AGAGCTTGAGAGATGGAATG+AGG - chr7_3:56904005-56904024 Msa1111180:CDS 45.0%
GAGAGATGGAATGAGGAGTT+TGG - chr7_3:56904012-56904031 Msa1111180:CDS 45.0%
!! GACAAGGGCACCAAAGTTTA+TGG - chr7_3:56904126-56904145 Msa1111180:five_prime_UTR 45.0%
!!! TTTTATTTTATTTTTAAGAA+TGG + chr7_3:56898670-56898689 None:intergenic 5.0%
GCTGTTAGGGCTGAAGAATG+GGG - chr7_3:56899032-56899051 Msa1111180:intron 50.0%
TAGGGCTGAAGAATGGGGTT+TGG - chr7_3:56899037-56899056 Msa1111180:intron 50.0%
CACCTGGGAGTGATGAATGA+AGG + chr7_3:56899131-56899150 None:intergenic 50.0%
TCATTCATCACTCCCAGGTG+AGG - chr7_3:56899131-56899150 Msa1111180:intron 50.0%
GGCAAATGAGCTACCTGGAA+TGG + chr7_3:56900463-56900482 None:intergenic 50.0%
AGCAGTTTGTGCACGGTTTG+AGG + chr7_3:56900702-56900721 None:intergenic 50.0%
GAACTGCAGCAGTTTGTGCA+CGG + chr7_3:56900709-56900728 None:intergenic 50.0%
ACATCGTCCCATCGAACAGA+AGG + chr7_3:56900893-56900912 None:intergenic 50.0%
TCTGTTCGATGGGACGATGT+TGG - chr7_3:56900893-56900912 Msa1111180:intron 50.0%
TTATCGAAATCCAGGTGGCC+TGG - chr7_3:56900974-56900993 Msa1111180:intron 50.0%
AAATCCAGGTGGCCTGGAAA+AGG - chr7_3:56900980-56900999 Msa1111180:intron 50.0%
!! ACCAGCTAGAGGTATTGCCT+TGG - chr7_3:56901073-56901092 Msa1111180:intron 50.0%
TCCAAGGCAATACCTCTAGC+TGG + chr7_3:56901077-56901096 None:intergenic 50.0%
GCCTTGGAACCTTGTCTCTT+TGG - chr7_3:56901089-56901108 Msa1111180:intron 50.0%
CCCAAAGAGACAAGGTTCCA+AGG + chr7_3:56901093-56901112 None:intergenic 50.0%
TTATAGCAGGAGTAGGGGGT+GGG + chr7_3:56901521-56901540 None:intergenic 50.0%
TTTATAGCAGGAGTAGGGGG+TGG + chr7_3:56901522-56901541 None:intergenic 50.0%
TGGATGTCACCCCATCAAAC+TGG + chr7_3:56902201-56902220 None:intergenic 50.0%
TTAGAGCAGCCGAGTTCTTC+TGG + chr7_3:56902570-56902589 None:intergenic 50.0%
AGGTGCAACCAATAAGCCAC+AGG - chr7_3:56902917-56902936 Msa1111180:intron 50.0%
ACGGCATCATCCAATTCCTG+TGG + chr7_3:56902936-56902955 None:intergenic 50.0%
TGATGCCGTTCTTAGGAGAC+TGG - chr7_3:56902947-56902966 Msa1111180:intron 50.0%
AGCACGTCGCTTACTAGGTA+AGG + chr7_3:56903299-56903318 None:intergenic 50.0%
!! ATATTCTTGGAGGCACCGGA+AGG - chr7_3:56903352-56903371 Msa1111180:intron 50.0%
TCTCACCGTCAAGGCAAATC+AGG - chr7_3:56903796-56903815 Msa1111180:CDS 50.0%
! GCATGCCTGATTTGCCTTGA+CGG + chr7_3:56903804-56903823 None:intergenic 50.0%
CATACCTCAGTCCTCTTACC+TGG + chr7_3:56903927-56903946 None:intergenic 50.0%
GGTAAGAGGACTGAGGTATG+AGG - chr7_3:56903927-56903946 Msa1111180:CDS 50.0%
CCATTCAAGGCTGTATTGCC+AGG + chr7_3:56904235-56904254 None:intergenic 50.0%
CCTGGCAATACAGCCTTGAA+TGG - chr7_3:56904232-56904251 Msa1111180:five_prime_UTR 50.0%
CGCGTCGCGTATAAGCTGAA+AGG - chr7_3:56898975-56898994 Msa1111180:CDS 55.0%
! TTTGCCTTTTCCAGGCCACC+TGG + chr7_3:56900987-56901006 None:intergenic 55.0%
GGTCTTCGAAGACCAGCTAG+AGG - chr7_3:56901062-56901081 Msa1111180:intron 55.0%
TTGCTTCTCTTTGGTCCGCC+TGG - chr7_3:56901190-56901209 Msa1111180:intron 55.0%
CTCTTTGGTCCGCCTGGTAA+TGG - chr7_3:56901196-56901215 Msa1111180:intron 55.0%
GACCATGCTTGCCAAAGCAG+TGG - chr7_3:56901222-56901241 Msa1111180:intron 55.0%
AGCCACTGCTTTGGCAAGCA+TGG + chr7_3:56901227-56901246 None:intergenic 55.0%
TATAGCAGGAGTAGGGGGTG+GGG + chr7_3:56901520-56901539 None:intergenic 55.0%
CAGGCTCTCAGTAGACGAGC+AGG - chr7_3:56900333-56900352 Msa1111180:intron 60.0%
ATAGCAGGAGTAGGGGGTGG+GGG + chr7_3:56901519-56901538 None:intergenic 60.0%
!! TTCTTGGAGGCACCGGAAGG+CGG - chr7_3:56903355-56903374 Msa1111180:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 56898622 56904316 56898622 ID=Msa1111180;Name=Msa1111180
chr7_3 mRNA 56898622 56904316 56898622 ID=Msa1111180-mRNA-1;Parent=Msa1111180;Name=Msa1111180-mRNA-1;_AED=0.09;_eAED=0.09;_QI=215|0.69|0.78|0.92|1|1|14|272|489
chr7_3 exon 56898622 56899010 56898622 ID=Msa1111180-mRNA-1:exon:12098;Parent=Msa1111180-mRNA-1
chr7_3 exon 56899136 56899218 56899136 ID=Msa1111180-mRNA-1:exon:12097;Parent=Msa1111180-mRNA-1
chr7_3 exon 56899360 56899395 56899360 ID=Msa1111180-mRNA-1:exon:12096;Parent=Msa1111180-mRNA-1
chr7_3 exon 56899634 56899724 56899634 ID=Msa1111180-mRNA-1:exon:12095;Parent=Msa1111180-mRNA-1
chr7_3 exon 56899970 56900019 56899970 ID=Msa1111180-mRNA-1:exon:12094;Parent=Msa1111180-mRNA-1
chr7_3 exon 56900691 56900814 56900691 ID=Msa1111180-mRNA-1:exon:12093;Parent=Msa1111180-mRNA-1
chr7_3 exon 56901241 56901249 56901241 ID=Msa1111180-mRNA-1:exon:12092;Parent=Msa1111180-mRNA-1
chr7_3 exon 56901450 56901530 56901450 ID=Msa1111180-mRNA-1:exon:12091;Parent=Msa1111180-mRNA-1
chr7_3 exon 56901635 56901750 56901635 ID=Msa1111180-mRNA-1:exon:12090;Parent=Msa1111180-mRNA-1
chr7_3 exon 56901855 56901950 56901855 ID=Msa1111180-mRNA-1:exon:12089;Parent=Msa1111180-mRNA-1
chr7_3 exon 56902024 56902243 56902024 ID=Msa1111180-mRNA-1:exon:12088;Parent=Msa1111180-mRNA-1
chr7_3 exon 56902450 56902469 56902450 ID=Msa1111180-mRNA-1:exon:12087;Parent=Msa1111180-mRNA-1
chr7_3 exon 56902584 56902699 56902584 ID=Msa1111180-mRNA-1:exon:12086;Parent=Msa1111180-mRNA-1
chr7_3 exon 56903791 56904316 56903791 ID=Msa1111180-mRNA-1:exon:12085;Parent=Msa1111180-mRNA-1
chr7_3 five_prime_UTR 56904102 56904316 56904102 ID=Msa1111180-mRNA-1:five_prime_utr;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56903791 56904101 56903791 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56902584 56902699 56902584 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56902450 56902469 56902450 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56902024 56902243 56902024 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56901855 56901950 56901855 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56901635 56901750 56901635 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56901450 56901530 56901450 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56901241 56901249 56901241 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56900691 56900814 56900691 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56899970 56900019 56899970 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56899634 56899724 56899634 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56899360 56899395 56899360 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56899136 56899218 56899136 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 CDS 56898894 56899010 56898894 ID=Msa1111180-mRNA-1:cds;Parent=Msa1111180-mRNA-1
chr7_3 three_prime_UTR 56898622 56898893 56898622 ID=Msa1111180-mRNA-1:three_prime_utr;Parent=Msa1111180-mRNA-1
Gene Sequence

>Msa1111180

ATGAGTTTTTTGCAGGGAATCATTGATTCCTTTAACTCTGTTTTCTCTCCTCAATCTTCTTCTTCTTCTCAAACCAATTTCAGTGCTTCTTCAATGGAAGCTTCACCTTCTTCTCCTTCTTCTTCGGTTTCAAACGAACGCGTCGCGTATAAGCTGAAAGGCTACTACGATTTAGCAACACAAGAAATCGATAAAGCTGTTAGGGCTGAAGAATGGGGTTTGGTTGATGACGCTATTCTTCACTACAGGAATGCTCATAGGATCCTTCTCGAAGCTAGTTCTACTCCTGTTCCTTCATTCATCACTCCCAGAATCCATAATCTTGTGTGTGACAGTGAGAAACAGAAAGTACAATCATATCGTCAAAAGATATCAAAATGGCAGGGACAAGTTTCTGAGAGATTGCAGGCTCTCAGTAGACGAGCAGGTAGCTCATTTGCCAATCAGAGCACCTCAAACCGTGCACAAACTGCTGCAGTTCCAACTAAACTATCAAATACTACAAAAAAAGTGCTACAAAAGAATCCTCAAAGAAAAGATGAGGTGAATAAAGTTCAAAGCCCGAAACCTAGTCAAACATCTGGTGAAAATTATGATACGAAACTGGTTGAAATGATTAACACTGCCATTGTAGATAGAAGTCCTTCTGTTCGATGGGACGATGTTGGTGGCCTGGAAAAGGCAAAGCAAGCTTTAATGGAGATGGTTATTTTGCCAACAAAGAGAAGAGACTTGTTCACTGGTCTTCGAAGACCAGCTAGAGGTTTGCTTCTCTTTGGTCCGCCTGGTAATGGTAAGACCATGCTTGCCAAAGCAGTGGCTTCAGAATCAGAAGCAACATTTTTTAATGTCACGGCAGCTTCCTTGACGTCAAAATGGGTGGGTGAAGCTGAAAAGCTTGTACGGACACTATTCTTGGTAGCTGTATCGAGACAGCCATCTGTAATTTTCATTGATGAGAACGTAGATATTGATAGTATAATGTCAACAAGGACGACAAATGAAAATGAGGCCAGCAGACGATTAAAATCTGAATTCCTTATCCAGTTTGATGGGGTGACATCCAATCCTGATGACATTGTGATTGTAATTGGTGCAACCAATAAGCCACAGGAATTGGATGATGCCGTTCTTAGGAGACTGGTTAAGAGAATATATGTACCTTTACCAAATGAAAATGTTAGGAAACTTCTGCTAAAACACAAACTCAAGGGTCAAGCGTTCTCCTTACCTAGTAGAGATCTAGAGATGCTGGTAAAAGAAACCGAAGGATACTCTGGAAGTGATCTGCAAGCCTTGTGTGAAGAAGCTGCAATGATGCCAATTAGAGAGCTGGGTTCTAACATTCTCACCGTAAGAGGACTGAGGTATGAGGACTTCAAGAAAGCAATGGCTGTGATCAGACCAAGTTTAAACAAAAGTAAATGGGAAGAGCTTGAGAGATGGAATGAGGAGTTTGGTTCAAATTGA
Protein sequence

>Msa1111180

MSFLQGIIDSFNSVFSPQSSSSSQTNFSASSMEASPSSPSSSVSNERVAYKLKGYYDLATQEIDKAVRAEEWGLVDDAILHYRNAHRILLEASSTPVPSFITPRIHNLVCDSEKQKVQSYRQKISKWQGQVSERLQALSRRAGSSFANQSTSNRAQTAAVPTKLSNTTKKVLQKNPQRKDEVNKVQSPKPSQTSGENYDTKLVEMINTAIVDRSPSVRWDDVGGLEKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVTAASLTSKWVGEAEKLVRTLFLVAVSRQPSVIFIDENVDIDSIMSTRTTNENEASRRLKSEFLIQFDGVTSNPDDIVIVIGATNKPQELDDAVLRRLVKRIYVPLPNENVRKLLLKHKLKGQAFSLPSRDLEMLVKETEGYSGSDLQALCEEAAMMPIRELGSNILTVRGLRYEDFKKAMAVIRPSLNKSKWEELERWNEEFGSN*