AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1460020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1460020 MtrunA17_Chr3g0114681 88.595 491 20 2 1 487 1 459 0.0 823
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1460020 AT1G44780.2 43.041 467 191 10 10 471 17 413 4.95e-96 300
Msa1460020 AT1G44780.1 42.827 467 193 9 10 471 17 414 8.61e-96 299
Msa1460020 AT4G08310.1 44.009 459 202 10 16 469 34 442 5.30e-92 290

Find 118 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATTGCTCGAGAAAGATTT+AGG 0.188651 tig0040588:+5375 Msa1460020:CDS
TTTACTTATAAACTTCTTAA+AGG 0.192372 tig0040588:-7135 Msa1460020:intergenic
CAATCGGTGCTGTGTTTATT+AGG 0.197249 tig0040588:-5075 Msa1460020:intergenic
CCCATTGCCTTCTGCTATCT+TGG 0.207283 tig0040588:-6803 Msa1460020:intergenic
TCTTCTGATGCTGCTTTATC+AGG 0.212935 tig0040588:-7518 Msa1460020:intergenic
AGGAAAAGCTTTCAATTGTT+TGG 0.216973 tig0040588:-8286 Msa1460020:intergenic
CCCTGAAGATGAGGAGAAAA+TGG 0.258537 tig0040588:+6726 Msa1460020:CDS
TTTAATAGCTTTCTTAATTA+GGG 0.269138 tig0040588:-6848 Msa1460020:intergenic
TAGGGTACACAGTACGATTT+CGG 0.291587 tig0040588:-5056 Msa1460020:intergenic
AGGGTACACAGTACGATTTC+GGG 0.302755 tig0040588:-5055 Msa1460020:intergenic
TAGAAATCAAAGAAGTAAAT+AGG 0.302925 tig0040588:+8955 Msa1460020:intron
TCCACTGGAATCTTGGGCTT+TGG 0.303298 tig0040588:-9077 Msa1460020:intergenic
GGGTAGTCTTCGCCGATTAT+TGG 0.304072 tig0040588:+7076 Msa1460020:CDS
ACTAGTTTCCACTGGAATCT+TGG 0.310141 tig0040588:-9084 Msa1460020:intergenic
GGAAAAGCTTTCAATTGTTT+GGG 0.312505 tig0040588:-8285 Msa1460020:intergenic
TCCATTATCAAAGGGGATCT+TGG 0.321674 tig0040588:+8219 Msa1460020:intron
TCTGAGGAGGACGGGGAAAA+AGG 0.327743 tig0040588:+6640 Msa1460020:CDS
CTAGTTTCCACTGGAATCTT+GGG 0.332663 tig0040588:-9083 Msa1460020:intergenic
GGAGTCTGCATCTTGCCTTT+TGG 0.346161 tig0040588:-7434 Msa1460020:intergenic
TGGGTTGTGTGAGAGATAAT+TGG 0.353086 tig0040588:-8266 Msa1460020:intergenic
CGGACAACTAATTAAAGAAT+TGG 0.355478 tig0040588:+8053 Msa1460020:CDS
ATGGAAGATTCTCCGGTATT+AGG 0.360072 tig0040588:+6745 Msa1460020:CDS
TTAGCACTTTCTGCAGGTTC+CGG 0.360550 tig0040588:-7287 Msa1460020:intergenic
TTACTTATAAACTTCTTAAA+GGG 0.364968 tig0040588:-7134 Msa1460020:intergenic
ATTAATGTCTTCTGAAGTTC+CGG 0.373428 tig0040588:+7268 Msa1460020:CDS
TAAGATCTTCCTCCAATAAT+CGG 0.374296 tig0040588:-7088 Msa1460020:intergenic
TTCTTAATTAGGGTCTCATT+TGG 0.378832 tig0040588:-6838 Msa1460020:intergenic
GGAATCTTGGGCTTTGGTGG+TGG 0.379600 tig0040588:-9071 Msa1460020:intergenic
ATCTTGGGCTTTGGTGGTGG+AGG 0.389017 tig0040588:-9068 Msa1460020:intergenic
CAATCTACCCAGCAAGAAAA+AGG 0.390333 tig0040588:+7490 Msa1460020:CDS
AATCGGTGCTGTGTTTATTA+GGG 0.395344 tig0040588:-5074 Msa1460020:intergenic
TTGTGTCAAGTACACGTAGA+AGG 0.396234 tig0040588:+9024 Msa1460020:CDS
GATTGCTCGAGAAAGATTTA+GGG 0.400346 tig0040588:+5376 Msa1460020:CDS
ACTGGAATCTTGGGCTTTGG+TGG 0.401139 tig0040588:-9074 Msa1460020:intergenic
TGATACTAAAGCAACTAAAA+AGG 0.402536 tig0040588:+7331 Msa1460020:CDS
AGGTCTGCTTAAAGAACAAA+AGG 0.410447 tig0040588:+6765 Msa1460020:CDS
CCCGGATCAAACTGGAAAAC+AGG 0.419083 tig0040588:-8306 Msa1460020:intergenic
GTCCTCCTCAGACGTCTTTG+TGG 0.425698 tig0040588:-6629 Msa1460020:intergenic
TGATTTCAGAAATGTAACTT+TGG 0.426248 tig0040588:+7055 Msa1460020:intron
GTTGTCATTATCACTACCTT+TGG 0.428731 tig0040588:-9117 Msa1460020:intergenic
GATTTCAGAAATGTAACTTT+GGG 0.430263 tig0040588:+7056 Msa1460020:intron
TGGAGTGGAGTTTAGCAGTT+GGG 0.437213 tig0040588:+5005 Msa1460020:five_prime_UTR
GGGTTGTGTGAGAGATAATT+GGG 0.444432 tig0040588:-8265 Msa1460020:intergenic
TTATTTCTGCCACAGTGCTT+AGG 0.445202 tig0040588:+6583 Msa1460020:intron
ATAAATAAATATCGAAGTGT+TGG 0.461778 tig0040588:+4980 None:intergenic
GAGGATAGCAGTGATGAGGA+TGG 0.464877 tig0040588:+9197 Msa1460020:CDS
AGCAGGTCCCTGAAAACAAA+CGG 0.472188 tig0040588:+8028 Msa1460020:CDS
CGTTTACTGTACACAGGAGT+TGG 0.472645 tig0040588:-7855 Msa1460020:intergenic
CCAAGATAGCAGAAGGCAAT+GGG 0.479554 tig0040588:+6803 Msa1460020:CDS
ACATCAATCTAAAGATGAAA+AGG 0.481334 tig0040588:+6699 Msa1460020:CDS
GTGGAGTGGAGTTTAGCAGT+TGG 0.490374 tig0040588:+5004 Msa1460020:five_prime_UTR
TAGGAAGAAGGCACGGGCCA+AGG 0.492533 tig0040588:+8974 Msa1460020:CDS
CCACAGTGCTTAGGAGAGGC+TGG 0.495291 tig0040588:+6592 Msa1460020:intron
CAAAGACGTCTGAGGAGGAC+GGG 0.495426 tig0040588:+6632 Msa1460020:CDS
AGTATTCTCTGCTGACGAAT+GGG 0.496613 tig0040588:-7588 Msa1460020:intergenic
ATCAATACCCTCAAGTTCCT+TGG 0.499914 tig0040588:-8991 Msa1460020:intergenic
TCTTTGCCACTAGTTTCCAC+TGG 0.500056 tig0040588:-9092 Msa1460020:intergenic
CTTCATACCATCTTCTGCCA+TGG 0.507544 tig0040588:-5148 Msa1460020:intergenic
AAATCTGTTATTAAAGCATG+TGG 0.508183 tig0040588:+7891 Msa1460020:CDS
GGCAAGATGCAGACTCCTGT+TGG 0.510887 tig0040588:+7440 Msa1460020:CDS
AGATGAAGAAGATGAAGAAG+AGG 0.513270 tig0040588:+9175 Msa1460020:CDS
CAAAGAAGTAAATAGGAAGA+AGG 0.517613 tig0040588:+8962 Msa1460020:CDS
GGAGAAAATGGAAGATTCTC+CGG 0.519838 tig0040588:+6738 Msa1460020:CDS
GTGAGAAACGCGAGAGCGCA+TGG 0.525813 tig0040588:-5217 Msa1460020:intergenic
GTCTTCAAATCCATCTGAGA+AGG 0.532832 tig0040588:+8101 Msa1460020:CDS
GAGAGTGAAGAATTTAATGC+GGG 0.538623 tig0040588:+9224 Msa1460020:CDS
ACCAAGATAGCAGAAGGCAA+TGG 0.540066 tig0040588:+6802 Msa1460020:CDS
GGTCTGCTTAAAGAACAAAA+GGG 0.541386 tig0040588:+6766 Msa1460020:CDS
GATAATGACAACGATGATGA+AGG 0.542203 tig0040588:+9128 Msa1460020:CDS
TAGTATTCTCTGCTGACGAA+TGG 0.542456 tig0040588:-7589 Msa1460020:intergenic
GCAGGTCCCTGAAAACAAAC+GGG 0.543917 tig0040588:+8029 Msa1460020:CDS
TAGTCTTCGCCGATTATTGG+AGG 0.546979 tig0040588:+7079 Msa1460020:CDS
ATCGAAGTGTTGGAGTGGAG+TGG 0.548192 tig0040588:+4990 None:intergenic
AGAGGAGGATAGCAGTGATG+AGG 0.550650 tig0040588:+9193 Msa1460020:CDS
GGCACGGGCCAAGGAACTTG+AGG 0.552578 tig0040588:+8983 Msa1460020:CDS
TCTTTAAGCAGACCTAATAC+CGG 0.555361 tig0040588:-6757 Msa1460020:intergenic
ATTATCAAAGGGGATCTTGG+AGG 0.556975 tig0040588:+8222 Msa1460020:intron
AGAGAGACCATGGCAGAAGA+TGG 0.563600 tig0040588:+5141 Msa1460020:exon
TGAAGAAGATGAAGAAGAGG+AGG 0.566614 tig0040588:+9178 Msa1460020:CDS
TTCAGATGAAGAGAGTGAAG+AGG 0.569278 tig0040588:+7379 Msa1460020:CDS
ACAAGAGACTGAAGGACAGA+AGG 0.569598 tig0040588:+6672 Msa1460020:CDS
AGTAAATAGGAAGAAGGCAC+GGG 0.570160 tig0040588:+8968 Msa1460020:CDS
TGTGTCAAGTACACGTAGAA+GGG 0.572728 tig0040588:+9025 Msa1460020:CDS
ACAAAGACGTCTGAGGAGGA+CGG 0.573683 tig0040588:+6631 Msa1460020:CDS
AAGTAAATAGGAAGAAGGCA+CGG 0.576297 tig0040588:+8967 Msa1460020:CDS
GCACGGGCCAAGGAACTTGA+GGG 0.580652 tig0040588:+8984 Msa1460020:CDS
TCTTCAAATCCATCTGAGAA+GGG 0.588082 tig0040588:+8102 Msa1460020:CDS
AAAGGATCTCCCTGAAGATG+AGG 0.591029 tig0040588:+6717 Msa1460020:CDS
TAAATATCGAAGTGTTGGAG+TGG 0.593688 tig0040588:+4985 None:intergenic
AGAGACTGAAGGACAGAAGG+AGG 0.595213 tig0040588:+6675 Msa1460020:CDS
GAAGAAATACTATCTAGAGA+AGG 0.598424 tig0040588:+8075 Msa1460020:CDS
AGAAAGAAACAGAGAGACCA+TGG 0.600219 tig0040588:+5131 Msa1460020:exon
CAAGGAACCAAGATAGCAGA+AGG 0.602593 tig0040588:+6796 Msa1460020:CDS
GTCTGCTTAAAGAACAAAAG+GGG 0.608849 tig0040588:+6767 Msa1460020:CDS
TATAAGTAAAGAGCTTGATG+AGG 0.612914 tig0040588:+7148 Msa1460020:CDS
TGAGAGTGAAGAATTTAATG+CGG 0.614155 tig0040588:+9223 Msa1460020:CDS
AAAGACGTCTGAGGAGGACG+GGG 0.615894 tig0040588:+6633 Msa1460020:CDS
TTATTAAAGCATGTGGGATG+AGG 0.618988 tig0040588:+7898 Msa1460020:CDS
GTCCCTGAAAACAAACGGGA+CGG 0.623725 tig0040588:+8033 Msa1460020:CDS
CATACTCTGCATTAGCCTTG+AGG 0.627628 tig0040588:-6885 Msa1460020:intergenic
TATCAAACAATCTTTAGACA+AGG 0.630540 tig0040588:+5434 Msa1460020:CDS
TCTGCCACAGTGCTTAGGAG+AGG 0.635941 tig0040588:+6588 Msa1460020:intron
AATAGTGATGCAGAAGACGA+TGG 0.643756 tig0040588:+7542 Msa1460020:CDS
TCCTGTGTACAGTAAACGTG+TGG 0.644428 tig0040588:+7860 Msa1460020:CDS
AAGATTCCAGTGGAAACTAG+TGG 0.653175 tig0040588:+9086 Msa1460020:CDS
ACTAGTGGCAAAGATACCAA+AGG 0.657324 tig0040588:+9101 Msa1460020:CDS
TCTGCTTAAAGAACAAAAGG+GGG 0.658439 tig0040588:+6768 Msa1460020:CDS
TGATGCCACAAAGACGTCTG+AGG 0.660915 tig0040588:+6624 Msa1460020:CDS
ACCAAAGCCCAAGATTCCAG+TGG 0.665045 tig0040588:+9076 Msa1460020:CDS
GAAAGTACACAAGAGACTGA+AGG 0.670007 tig0040588:+6664 Msa1460020:CDS
TGCCACAAAGACGTCTGAGG+AGG 0.671550 tig0040588:+6627 Msa1460020:CDS
TCCACACGTTTACTGTACAC+AGG 0.676303 tig0040588:-7861 Msa1460020:intergenic
AATCTGTTATTAAAGCATGT+GGG 0.677116 tig0040588:+7892 Msa1460020:CDS
GTCAGCAGAGAATACTACCA+AGG 0.702422 tig0040588:+7595 Msa1460020:CDS
AGGCAAAGAAAATGACGAGG+AGG 0.708511 tig0040588:+9148 Msa1460020:CDS
CTGCTTAAAGAACAAAAGGG+GGG 0.713202 tig0040588:+6769 Msa1460020:CDS
TGAAGGCAAAGAAAATGACG+AGG 0.732415 tig0040588:+9145 Msa1460020:CDS
AGAAACGCGAGAGCGCATGG+CGG 0.788364 tig0040588:-5214 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAATTATTTCATTATATA+AGG - tig0040588:7715-7734 Msa1460020:intergenic 10.0%
!!! TTTATTTTTTACTTGTCAAT+CGG - tig0040588:5094-5113 Msa1460020:intergenic 15.0%
!! AAACAATATAACTTCAAATT+TGG - tig0040588:6001-6020 Msa1460020:intergenic 15.0%
!! AAATCCAAATAAAAGAATAA+AGG - tig0040588:6173-6192 Msa1460020:intergenic 15.0%
!!! TTTATTTGGATTTTGTTTTA+TGG + tig0040588:6180-6199 Msa1460020:intron 15.0%
!! TTTAATAGCTTTCTTAATTA+GGG - tig0040588:6851-6870 Msa1460020:intergenic 15.0%
!!! TTTTAATAGCTTTCTTAATT+AGG - tig0040588:6852-6871 Msa1460020:intergenic 15.0%
!! ATTAATATCAGCATATTATT+TGG + tig0040588:6991-7010 Msa1460020:intron 15.0%
!! TTACTTATAAACTTCTTAAA+GGG - tig0040588:7137-7156 Msa1460020:intergenic 15.0%
!! TTTACTTATAAACTTCTTAA+AGG - tig0040588:7138-7157 Msa1460020:intergenic 15.0%
!! GTTAAATGTATTAAATATGT+TGG + tig0040588:7767-7786 Msa1460020:intron 15.0%
!!! TTGACTTTTTTATAAATAAC+GGG - tig0040588:8009-8028 Msa1460020:intergenic 15.0%
!!! CTTGACTTTTTTATAAATAA+CGG - tig0040588:8010-8029 Msa1460020:intergenic 15.0%
!!! TGAAAATCAAAAATCAATTT+TGG + tig0040588:8469-8488 Msa1460020:intron 15.0%
!! TCTAAGAAAATAAGAAAAAA+GGG - tig0040588:8939-8958 Msa1460020:intergenic 15.0%
!!! TTCTAAGAAAATAAGAAAAA+AGG - tig0040588:8940-8959 Msa1460020:intergenic 15.0%
!!! AGTCTATTTAAAATATTTCA+AGG + tig0040588:9249-9268 Msa1460020:intron 15.0%
!! AAAAATAGCTTATACATAAG+TGG - tig0040588:5553-5572 Msa1460020:intergenic 20.0%
!!! TTTTTTAATTCAGATTGCAA+GGG - tig0040588:5832-5851 Msa1460020:intergenic 20.0%
!!! TTTTTTTAATTCAGATTGCA+AGG - tig0040588:5833-5852 Msa1460020:intergenic 20.0%
!!! TATGCTTTTACTTCATTTTA+TGG + tig0040588:6352-6371 Msa1460020:intron 20.0%
!! ATACATTTATACTTGACATA+TGG - tig0040588:6453-6472 Msa1460020:intergenic 20.0%
!!! TTTTCTAATTATTCGTTGTT+CGG + tig0040588:6916-6935 Msa1460020:intron 20.0%
!!! TAAACTTGATAAATTTTCTC+TGG + tig0040588:7109-7128 Msa1460020:CDS 20.0%
!!! TTTGGAACACTTTTTTTTTT+AGG - tig0040588:7419-7438 Msa1460020:intergenic 20.0%
!!! AAAAAAAAAAGTGTTCCAAA+AGG + tig0040588:7419-7438 Msa1460020:CDS 20.0%
!! GAATAATTTAGTAATAACCT+TGG - tig0040588:7615-7634 Msa1460020:intergenic 20.0%
!! TATTTCATTATATAAGGAGT+TGG - tig0040588:7709-7728 Msa1460020:intergenic 20.0%
!! TATTTATAAAAAAGTCAAGC+AGG + tig0040588:8011-8030 Msa1460020:CDS 20.0%
!! AATTTACAGTAAAGTACAAA+AGG - tig0040588:8421-8440 Msa1460020:intergenic 20.0%
!! AATTTCCAATAATAGATGAT+AGG - tig0040588:8447-8466 Msa1460020:intergenic 20.0%
!! ATGTATTGAAAAACAAAAAC+TGG + tig0040588:8608-8627 Msa1460020:intron 20.0%
!! AAATCCAAATTTGCAAATAA+AGG + tig0040588:8743-8762 Msa1460020:intron 20.0%
!! AATCCAAATTTGCAAATAAA+GGG + tig0040588:8744-8763 Msa1460020:intron 20.0%
!! TAGAAATCAAAGAAGTAAAT+AGG + tig0040588:8955-8974 Msa1460020:intron 20.0%
!! TCATAAATCATAATAGATTC+TGG + tig0040588:9301-9320 Msa1460020:intron 20.0%
! TATCAAACAATCTTTAGACA+AGG + tig0040588:5434-5453 Msa1460020:CDS 25.0%
!!! AAGTTATAAGCTGTTTTCAT+AGG + tig0040588:5612-5631 Msa1460020:intron 25.0%
!!! AGTTATAAGCTGTTTTCATA+GGG + tig0040588:5613-5632 Msa1460020:intron 25.0%
! GTATGAAATGACATAAAAAG+AGG - tig0040588:5876-5895 Msa1460020:intergenic 25.0%
! TAAAAGAATAAAGGTCTGTT+TGG - tig0040588:6164-6183 Msa1460020:intergenic 25.0%
!! CAGACCTTTATTCTTTTATT+TGG + tig0040588:6166-6185 Msa1460020:intron 25.0%
!!! TGTGGATTTTAAAAATTACC+TGG + tig0040588:6257-6276 Msa1460020:intron 25.0%
! ACATCAATCTAAAGATGAAA+AGG + tig0040588:6699-6718 Msa1460020:CDS 25.0%
! TGATTTCAGAAATGTAACTT+TGG + tig0040588:7055-7074 Msa1460020:intron 25.0%
! GATTTCAGAAATGTAACTTT+GGG + tig0040588:7056-7075 Msa1460020:intron 25.0%
!!! TGTATTTTTGTGCTTCTTAT+GGG - tig0040588:7209-7228 Msa1460020:intergenic 25.0%
! CAAAGTTATGTTTAATGTGA+AGG + tig0040588:7244-7263 Msa1460020:intron 25.0%
!!! TTTTTAGTTGCTTTAGTATC+AGG - tig0040588:7332-7351 Msa1460020:intergenic 25.0%
! TGATACTAAAGCAACTAAAA+AGG + tig0040588:7331-7350 Msa1460020:CDS 25.0%
! AAATCTGTTATTAAAGCATG+TGG + tig0040588:7891-7910 Msa1460020:CDS 25.0%
! AATCTGTTATTAAAGCATGT+GGG + tig0040588:7892-7911 Msa1460020:CDS 25.0%
!!! ACTTTTTTATAAATAACGGG+AGG - tig0040588:8006-8025 Msa1460020:intergenic 25.0%
! AAATAATGAAGCTAACATTC+GGG - tig0040588:8173-8192 Msa1460020:intergenic 25.0%
! CAAATAATGAAGCTAACATT+CGG - tig0040588:8174-8193 Msa1460020:intergenic 25.0%
! TATATGCATTCCATTATCAA+AGG + tig0040588:8210-8229 Msa1460020:intron 25.0%
! ATATGCATTCCATTATCAAA+GGG + tig0040588:8211-8230 Msa1460020:intron 25.0%
! TTAGTCCTATCATCTATTAT+TGG + tig0040588:8439-8458 Msa1460020:intron 25.0%
! CAAAAACTGGAATATTTGAT+AGG + tig0040588:8621-8640 Msa1460020:intron 25.0%
! ATACAAATCTAACATCTTCT+GGG - tig0040588:8697-8716 Msa1460020:intergenic 25.0%
! TATACAAATCTAACATCTTC+TGG - tig0040588:8698-8717 Msa1460020:intergenic 25.0%
! TTTCAAATGACCCAAAAAAA+GGG - tig0040588:8726-8745 Msa1460020:intergenic 25.0%
! ATTTCAAATGACCCAAAAAA+AGG - tig0040588:8727-8746 Msa1460020:intergenic 25.0%
! ATCCAAATTTGCAAATAAAG+GGG + tig0040588:8745-8764 Msa1460020:intron 25.0%
! ATACAAATCTAACATCTTCT+GGG - tig0040588:8697-8716 Msa1460020:intergenic 25.0%
! TATACAAATCTAACATCTTC+TGG - tig0040588:8698-8717 Msa1460020:intergenic 25.0%
! TTTCAAATGACCCAAAAAAA+GGG - tig0040588:8726-8745 Msa1460020:intergenic 25.0%
! ATTTCAAATGACCCAAAAAA+AGG - tig0040588:8727-8746 Msa1460020:intergenic 25.0%
AGAAGAGAAAGAAACAAACT+CGG - tig0040588:5256-5275 Msa1460020:intergenic 30.0%
!! TAGGGTTTTTCAAAGGAAAA+AGG - tig0040588:5470-5489 Msa1460020:intergenic 30.0%
!! TTGGAATTAGGGTTTTTCAA+AGG - tig0040588:5477-5496 Msa1460020:intergenic 30.0%
ATAACCTTGTAAGAAAGTGA+CGG - tig0040588:5726-5745 Msa1460020:intergenic 30.0%
AAGCTATAAGCTACTTGAAT+TGG - tig0040588:5786-5805 Msa1460020:intergenic 30.0%
TTGGTTGAATTTGTAGTGTT+TGG - tig0040588:5927-5946 Msa1460020:intergenic 30.0%
AAGCTATCTTGGAGAAATTA+TGG + tig0040588:6047-6066 Msa1460020:intron 30.0%
!! GGAAAACAGTCTAAAACTTT+TGG + tig0040588:6112-6131 Msa1460020:intron 30.0%
TAGCTGAAGAAACTTATTGT+TGG + tig0040588:6316-6335 Msa1460020:intron 30.0%
TATATGTGATGAAGAATGCT+TGG + tig0040588:6529-6548 Msa1460020:intron 30.0%
TTCTTAATTAGGGTCTCATT+TGG - tig0040588:6841-6860 Msa1460020:intergenic 30.0%
AAAAAGATCTTCATACCTCA+AGG + tig0040588:6870-6889 Msa1460020:CDS 30.0%
TAAGATCTTCCTCCAATAAT+CGG - tig0040588:7091-7110 Msa1460020:intergenic 30.0%
TATAAGTAAAGAGCTTGATG+AGG + tig0040588:7148-7167 Msa1460020:CDS 30.0%
!! GTGTATTTTTGTGCTTCTTA+TGG - tig0040588:7210-7229 Msa1460020:intergenic 30.0%
!! ATTAATGTCTTCTGAAGTTC+CGG + tig0040588:7268-7287 Msa1460020:CDS 30.0%
!! TTCTGAAGTTCAAGGAAAAA+AGG - tig0040588:7819-7838 Msa1460020:intergenic 30.0%
! GATGAGGTGATTTTCTATTT+TGG + tig0040588:7914-7933 Msa1460020:intron 30.0%
CGGACAACTAATTAAAGAAT+TGG + tig0040588:8053-8072 Msa1460020:CDS 30.0%
GAAGAAATACTATCTAGAGA+AGG + tig0040588:8075-8094 Msa1460020:CDS 30.0%
AATAATGAAGCTAACATTCG+GGG - tig0040588:8172-8191 Msa1460020:intergenic 30.0%
TATGCATTCCATTATCAAAG+GGG + tig0040588:8212-8231 Msa1460020:intron 30.0%
GGAAAAGCTTTCAATTGTTT+GGG - tig0040588:8288-8307 Msa1460020:intergenic 30.0%
AGGAAAAGCTTTCAATTGTT+TGG - tig0040588:8289-8308 Msa1460020:intergenic 30.0%
TTACTGCACAAAAAAAAACC+CGG - tig0040588:8327-8346 Msa1460020:intergenic 30.0%
! AAAGTGCCATTCTCTATTAT+TGG + tig0040588:8525-8544 Msa1460020:intron 30.0%
CTAACTCCAATAATAGAGAA+TGG - tig0040588:8534-8553 Msa1460020:intergenic 30.0%
CATTCTCTATTATTGGAGTT+AGG + tig0040588:8532-8551 Msa1460020:intron 30.0%
ACTCCAGTATTTGCAAATAA+AGG + tig0040588:8646-8665 Msa1460020:intron 30.0%
CTCCAGTATTTGCAAATAAA+GGG + tig0040588:8647-8666 Msa1460020:intron 30.0%
TCCAGTATTTGCAAATAAAG+GGG + tig0040588:8648-8667 Msa1460020:intron 30.0%
TACAAATCTAACATCTTCTG+GGG - tig0040588:8696-8715 Msa1460020:intergenic 30.0%
!!! TGTATAGTAGTCCCTTTTTT+TGG + tig0040588:8712-8731 Msa1460020:intron 30.0%
!!! GTATAGTAGTCCCTTTTTTT+GGG + tig0040588:8713-8732 Msa1460020:intron 30.0%
! ATCCCCTTTATTTGCAAATT+TGG - tig0040588:8750-8769 Msa1460020:intergenic 30.0%
TACAAATCTAACATCTTCTG+GGG - tig0040588:8696-8715 Msa1460020:intergenic 30.0%
!!! TGTATAGTAGTCCCTTTTTT+TGG + tig0040588:8712-8731 Msa1460020:intron 30.0%
!!! GTATAGTAGTCCCTTTTTTT+GGG + tig0040588:8713-8732 Msa1460020:intron 30.0%
ATAAAATGAGACCATATCAG+TGG - tig0040588:8889-8908 Msa1460020:intergenic 30.0%
CAAAGAAGTAAATAGGAAGA+AGG + tig0040588:8962-8981 Msa1460020:CDS 30.0%
TGAGAGTGAAGAATTTAATG+CGG + tig0040588:9223-9242 Msa1460020:CDS 30.0%
!! AATCGGTGCTGTGTTTATTA+GGG - tig0040588:5077-5096 Msa1460020:intergenic 35.0%
AGATTGCTCGAGAAAGATTT+AGG + tig0040588:5375-5394 Msa1460020:CDS 35.0%
GATTGCTCGAGAAAGATTTA+GGG + tig0040588:5376-5395 Msa1460020:CDS 35.0%
TTATACATATGCGTTTGCGT+TGG - tig0040588:5496-5515 Msa1460020:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + tig0040588:6036-6055 Msa1460020:intron 35.0%
GAATAAAGGTCTGTTTGGAT+TGG - tig0040588:6159-6178 Msa1460020:intergenic 35.0%
!!! TGCTGAAAAGTTGGTTTTTC+TGG + tig0040588:6225-6244 Msa1460020:intron 35.0%
!!! TTTTTCTGGCTGTTTTTGTG+TGG + tig0040588:6239-6258 Msa1460020:intron 35.0%
TGTATTCAGCTTAAGTGAAG+AGG - tig0040588:6395-6414 Msa1460020:intergenic 35.0%
! TGTTTTGTGTGACCAAACTT+TGG + tig0040588:6424-6443 Msa1460020:intron 35.0%
GACATATGGTAACCAAAGTT+TGG - tig0040588:6439-6458 Msa1460020:intergenic 35.0%
CTATCATCACTAGATGAAAG+TGG - tig0040588:6495-6514 Msa1460020:intergenic 35.0%
TCTTTAAGCAGACCTAATAC+CGG - tig0040588:6760-6779 Msa1460020:intergenic 35.0%
AGGTCTGCTTAAAGAACAAA+AGG + tig0040588:6765-6784 Msa1460020:CDS 35.0%
GGTCTGCTTAAAGAACAAAA+GGG + tig0040588:6766-6785 Msa1460020:CDS 35.0%
GTCTGCTTAAAGAACAAAAG+GGG + tig0040588:6767-6786 Msa1460020:CDS 35.0%
TCTGCTTAAAGAACAAAAGG+GGG + tig0040588:6768-6787 Msa1460020:CDS 35.0%
! ATTTTCTTAGCACTTTCTGC+AGG - tig0040588:7296-7315 Msa1460020:intergenic 35.0%
!! TCATCTCCTTTACGCTTTTT+GGG - tig0040588:7467-7486 Msa1460020:intergenic 35.0%
!! CTTGTTTCTTCTGAAGTTCA+AGG - tig0040588:7827-7846 Msa1460020:intergenic 35.0%
TTATTAAAGCATGTGGGATG+AGG + tig0040588:7898-7917 Msa1460020:CDS 35.0%
CAACAAAGAACTAGGAACAT+AGG - tig0040588:7943-7962 Msa1460020:intergenic 35.0%
! ATGTTCCTAGTTCTTTGTTG+AGG + tig0040588:7943-7962 Msa1460020:intron 35.0%
ATCATCCTCAACAAAGAACT+AGG - tig0040588:7951-7970 Msa1460020:intergenic 35.0%
TCTTCAAATCCATCTGAGAA+GGG + tig0040588:8102-8121 Msa1460020:CDS 35.0%
AAAAAAAACCCGGATCAAAC+TGG - tig0040588:8317-8336 Msa1460020:intergenic 35.0%
! TAGAGAATGGCACTTTTACA+TGG - tig0040588:8521-8540 Msa1460020:intergenic 35.0%
TAAGTAGTCTCAGACAAACA+TGG + tig0040588:8566-8585 Msa1460020:intron 35.0%
! TCCCCTTTATTTGCAAATAC+TGG - tig0040588:8652-8671 Msa1460020:intergenic 35.0%
CAACTTAATGCAGCAAACAT+TGG - tig0040588:8847-8866 Msa1460020:intergenic 35.0%
AAGTAAATAGGAAGAAGGCA+CGG + tig0040588:8967-8986 Msa1460020:CDS 35.0%
GTTGTCATTATCACTACCTT+TGG - tig0040588:9120-9139 Msa1460020:intergenic 35.0%
GATAATGACAACGATGATGA+AGG + tig0040588:9128-9147 Msa1460020:CDS 35.0%
AGATGAAGAAGATGAAGAAG+AGG + tig0040588:9175-9194 Msa1460020:CDS 35.0%
GAGAGTGAAGAATTTAATGC+GGG + tig0040588:9224-9243 Msa1460020:CDS 35.0%
TAGGGTACACAGTACGATTT+CGG - tig0040588:5059-5078 Msa1460020:intergenic 40.0%
!! CAATCGGTGCTGTGTTTATT+AGG - tig0040588:5078-5097 Msa1460020:intergenic 40.0%
AGAAAGAAACAGAGAGACCA+TGG + tig0040588:5131-5150 Msa1460020:exon 40.0%
! AGGGTTTGACGAGTTTTCTT+TGG + tig0040588:5395-5414 Msa1460020:CDS 40.0%
ATGCGTTTGCGTTGGAATTA+GGG - tig0040588:5488-5507 Msa1460020:intergenic 40.0%
TATGCGTTTGCGTTGGAATT+AGG - tig0040588:5489-5508 Msa1460020:intergenic 40.0%
! CTGTTTTCATAGGGTCTGTT+TGG + tig0040588:5622-5641 Msa1460020:intron 40.0%
! CTAACCGTCACTTTCTTACA+AGG + tig0040588:5719-5738 Msa1460020:intron 40.0%
!! CCTATAGCGGATAAGATAGT+TGG - tig0040588:5946-5965 Msa1460020:intergenic 40.0%
CCAACTATCTTATCCGCTAT+AGG + tig0040588:5943-5962 Msa1460020:intron 40.0%
!! TGAACGAAGTCGCTGTTTTA+TGG + tig0040588:6091-6110 Msa1460020:intron 40.0%
TTCTGCTGTTGCTGAAAAGT+TGG + tig0040588:6216-6235 Msa1460020:intron 40.0%
! TTACCTGGCTTGTCAAATAC+CGG + tig0040588:6272-6291 Msa1460020:intron 40.0%
!! TTATTTCTGCCACAGTGCTT+AGG + tig0040588:6583-6602 Msa1460020:intron 40.0%
! GAAAGTACACAAGAGACTGA+AGG + tig0040588:6664-6683 Msa1460020:CDS 40.0%
! CCATTTTCTCCTCATCTTCA+GGG - tig0040588:6729-6748 Msa1460020:intergenic 40.0%
! TCCATTTTCTCCTCATCTTC+AGG - tig0040588:6730-6749 Msa1460020:intergenic 40.0%
GGAGAAAATGGAAGATTCTC+CGG + tig0040588:6738-6757 Msa1460020:CDS 40.0%
ATGGAAGATTCTCCGGTATT+AGG + tig0040588:6745-6764 Msa1460020:CDS 40.0%
CTGCTTAAAGAACAAAAGGG+GGG + tig0040588:6769-6788 Msa1460020:CDS 40.0%
TTCAGATGAAGAGAGTGAAG+AGG + tig0040588:7379-7398 Msa1460020:CDS 40.0%
! GTCATCTCCTTTACGCTTTT+TGG - tig0040588:7468-7487 Msa1460020:intergenic 40.0%
! CTTTTTCTTGCTGGGTAGAT+TGG - tig0040588:7492-7511 Msa1460020:intergenic 40.0%
CAATCTACCCAGCAAGAAAA+AGG + tig0040588:7490-7509 Msa1460020:CDS 40.0%
!! TCTTCTGATGCTGCTTTATC+AGG - tig0040588:7521-7540 Msa1460020:intergenic 40.0%
AATAGTGATGCAGAAGACGA+TGG + tig0040588:7542-7561 Msa1460020:CDS 40.0%
AGTATTCTCTGCTGACGAAT+GGG - tig0040588:7591-7610 Msa1460020:intergenic 40.0%
TAGTATTCTCTGCTGACGAA+TGG - tig0040588:7592-7611 Msa1460020:intergenic 40.0%
GTCTTCAAATCCATCTGAGA+AGG + tig0040588:8101-8120 Msa1460020:CDS 40.0%
AAAAACTCACCCTTCTCAGA+TGG - tig0040588:8114-8133 Msa1460020:intergenic 40.0%
TCCATTATCAAAGGGGATCT+TGG + tig0040588:8219-8238 Msa1460020:intron 40.0%
TCCAAGATCCCCTTTGATAA+TGG - tig0040588:8223-8242 Msa1460020:intergenic 40.0%
ATTATCAAAGGGGATCTTGG+AGG + tig0040588:8222-8241 Msa1460020:intron 40.0%
GGGTTGTGTGAGAGATAATT+GGG - tig0040588:8268-8287 Msa1460020:intergenic 40.0%
TGGGTTGTGTGAGAGATAAT+TGG - tig0040588:8269-8288 Msa1460020:intergenic 40.0%
! TCCTGTTTTCCAGTTTGATC+CGG + tig0040588:8305-8324 Msa1460020:CDS 40.0%
! AGTAAATAGGAAGAAGGCAC+GGG + tig0040588:8968-8987 Msa1460020:CDS 40.0%
ATCAATACCCTCAAGTTCCT+TGG - tig0040588:8994-9013 Msa1460020:intergenic 40.0%
TTGTGTCAAGTACACGTAGA+AGG + tig0040588:9024-9043 Msa1460020:CDS 40.0%
TGTGTCAAGTACACGTAGAA+GGG + tig0040588:9025-9044 Msa1460020:CDS 40.0%
!!! AAGGGCAACGATTAGTTTTG+CGG + tig0040588:9043-9062 Msa1460020:CDS 40.0%
CTAGTTTCCACTGGAATCTT+GGG - tig0040588:9086-9105 Msa1460020:intergenic 40.0%
! ACTAGTTTCCACTGGAATCT+TGG - tig0040588:9087-9106 Msa1460020:intergenic 40.0%
AAGATTCCAGTGGAAACTAG+TGG + tig0040588:9086-9105 Msa1460020:CDS 40.0%
ACTAGTGGCAAAGATACCAA+AGG + tig0040588:9101-9120 Msa1460020:CDS 40.0%
TGAAGGCAAAGAAAATGACG+AGG + tig0040588:9145-9164 Msa1460020:CDS 40.0%
TGAAGAAGATGAAGAAGAGG+AGG + tig0040588:9178-9197 Msa1460020:CDS 40.0%
! CTGCACTGCTTTCATTTTGT+TGG + tig0040588:9274-9293 Msa1460020:intron 40.0%
! TTCTCTAGTCCTTTTTGCAG+TGG + tig0040588:9334-9353 Msa1460020:intron 40.0%
ACTGCTTAACCACTGCAAAA+AGG - tig0040588:9346-9365 Msa1460020:intergenic 40.0%
TGGAGTGGAGTTTAGCAGTT+GGG + tig0040588:5005-5024 Msa1460020:five_prime_UTR 45.0%
AGGGTACACAGTACGATTTC+GGG - tig0040588:5058-5077 Msa1460020:intergenic 45.0%
CTTCATACCATCTTCTGCCA+TGG - tig0040588:5151-5170 Msa1460020:intergenic 45.0%
! GCAGATAAGCTAGCCTATAG+CGG - tig0040588:5959-5978 Msa1460020:intergenic 45.0%
TTTCCGGTATTTGACAAGCC+AGG - tig0040588:6278-6297 Msa1460020:intergenic 45.0%
GGCTTGTCAAATACCGGAAA+TGG + tig0040588:6278-6297 Msa1460020:intron 45.0%
TGTCAAATACCGGAAATGGC+AGG + tig0040588:6282-6301 Msa1460020:intron 45.0%
ACAAGAGACTGAAGGACAGA+AGG + tig0040588:6672-6691 Msa1460020:CDS 45.0%
AAAGGATCTCCCTGAAGATG+AGG + tig0040588:6717-6736 Msa1460020:CDS 45.0%
CCCTGAAGATGAGGAGAAAA+TGG + tig0040588:6726-6745 Msa1460020:CDS 45.0%
GAACAAAAGGGGGGTAAACA+AGG + tig0040588:6778-6797 Msa1460020:CDS 45.0%
CAAGGAACCAAGATAGCAGA+AGG + tig0040588:6796-6815 Msa1460020:CDS 45.0%
ACCAAGATAGCAGAAGGCAA+TGG + tig0040588:6802-6821 Msa1460020:CDS 45.0%
CCAAGATAGCAGAAGGCAAT+GGG + tig0040588:6803-6822 Msa1460020:CDS 45.0%
!! CATACTCTGCATTAGCCTTG+AGG - tig0040588:6888-6907 Msa1460020:intergenic 45.0%
! TAGTCTTCGCCGATTATTGG+AGG + tig0040588:7079-7098 Msa1460020:CDS 45.0%
TTAGCACTTTCTGCAGGTTC+CGG - tig0040588:7290-7309 Msa1460020:intergenic 45.0%
!!! TTACGCTTTTTGGGTCCAAC+AGG - tig0040588:7458-7477 Msa1460020:intergenic 45.0%
! GTTGGACCCAAAAAGCGTAA+AGG + tig0040588:7458-7477 Msa1460020:CDS 45.0%
! GGCTTGACCTTTTTCTTGCT+GGG - tig0040588:7500-7519 Msa1460020:intergenic 45.0%
! AGGCTTGACCTTTTTCTTGC+TGG - tig0040588:7501-7520 Msa1460020:intergenic 45.0%
GTCAGCAGAGAATACTACCA+AGG + tig0040588:7595-7614 Msa1460020:CDS 45.0%
CGTTTACTGTACACAGGAGT+TGG - tig0040588:7858-7877 Msa1460020:intergenic 45.0%
TCCTGTGTACAGTAAACGTG+TGG + tig0040588:7860-7879 Msa1460020:CDS 45.0%
TCCACACGTTTACTGTACAC+AGG - tig0040588:7864-7883 Msa1460020:intergenic 45.0%
AGCAGGTCCCTGAAAACAAA+CGG + tig0040588:8028-8047 Msa1460020:CDS 45.0%
! CCTGTTTTCCAGTTTGATCC+GGG + tig0040588:8306-8325 Msa1460020:CDS 45.0%
TGATGCTACAGCCACTGATA+TGG + tig0040588:8875-8894 Msa1460020:intron 45.0%
! TCTTTGCCACTAGTTTCCAC+TGG - tig0040588:9095-9114 Msa1460020:intergenic 45.0%
AGGCAAAGAAAATGACGAGG+AGG + tig0040588:9148-9167 Msa1460020:CDS 45.0%
!!! TTTTATCTTTATATTTTTAT+TGG + tig0040588:8903-8922 Msa1460020:intron 5.0%
GTGGAGTGGAGTTTAGCAGT+TGG + tig0040588:5004-5023 Msa1460020:five_prime_UTR 50.0%
AGAGAGACCATGGCAGAAGA+TGG + tig0040588:5141-5160 Msa1460020:exon 50.0%
ATACCGGAAATGGCAGGTCA+TGG + tig0040588:6288-6307 Msa1460020:intron 50.0%
TACCGGAAATGGCAGGTCAT+GGG + tig0040588:6289-6308 Msa1460020:intron 50.0%
TGATGCCACAAAGACGTCTG+AGG + tig0040588:6624-6643 Msa1460020:CDS 50.0%
ACAAAGACGTCTGAGGAGGA+CGG + tig0040588:6631-6650 Msa1460020:CDS 50.0%
AGAGACTGAAGGACAGAAGG+AGG + tig0040588:6675-6694 Msa1460020:CDS 50.0%
CCCATTGCCTTCTGCTATCT+TGG - tig0040588:6806-6825 Msa1460020:intergenic 50.0%
! GGGTAGTCTTCGCCGATTAT+TGG + tig0040588:7076-7095 Msa1460020:CDS 50.0%
! GGAGTCTGCATCTTGCCTTT+TGG - tig0040588:7437-7456 Msa1460020:intergenic 50.0%
GCAGGTCCCTGAAAACAAAC+GGG + tig0040588:8029-8048 Msa1460020:CDS 50.0%
GTCCCTGAAAACAAACGGGA+CGG + tig0040588:8033-8052 Msa1460020:CDS 50.0%
!! GTCCGTCCCGTTTGTTTTCA+GGG - tig0040588:8038-8057 Msa1460020:intergenic 50.0%
!! TGTCCGTCCCGTTTGTTTTC+AGG - tig0040588:8039-8058 Msa1460020:intergenic 50.0%
CCCGGATCAAACTGGAAAAC+AGG - tig0040588:8309-8328 Msa1460020:intergenic 50.0%
CAAACATGGCTGCACAGAGA+TGG + tig0040588:8580-8599 Msa1460020:intron 50.0%
! ACTGGAATCTTGGGCTTTGG+TGG - tig0040588:9077-9096 Msa1460020:intergenic 50.0%
ACCAAAGCCCAAGATTCCAG+TGG + tig0040588:9076-9095 Msa1460020:CDS 50.0%
TCCACTGGAATCTTGGGCTT+TGG - tig0040588:9080-9099 Msa1460020:intergenic 50.0%
AGAGGAGGATAGCAGTGATG+AGG + tig0040588:9193-9212 Msa1460020:CDS 50.0%
GAGGATAGCAGTGATGAGGA+TGG + tig0040588:9197-9216 Msa1460020:CDS 50.0%
! TGCCCATGACCTGCCATTTC+CGG - tig0040588:6294-6313 Msa1460020:intergenic 55.0%
TCTGCCACAGTGCTTAGGAG+AGG + tig0040588:6588-6607 Msa1460020:intron 55.0%
TGCCACAAAGACGTCTGAGG+AGG + tig0040588:6627-6646 Msa1460020:CDS 55.0%
GTCCTCCTCAGACGTCTTTG+TGG - tig0040588:6632-6651 Msa1460020:intergenic 55.0%
CAAAGACGTCTGAGGAGGAC+GGG + tig0040588:6632-6651 Msa1460020:CDS 55.0%
AAAGACGTCTGAGGAGGACG+GGG + tig0040588:6633-6652 Msa1460020:CDS 55.0%
TCTGAGGAGGACGGGGAAAA+AGG + tig0040588:6640-6659 Msa1460020:CDS 55.0%
GGCAAGATGCAGACTCCTGT+TGG + tig0040588:7440-7459 Msa1460020:CDS 55.0%
!! ATCTTGGGCTTTGGTGGTGG+AGG - tig0040588:9071-9090 Msa1460020:intergenic 55.0%
! GGAATCTTGGGCTTTGGTGG+TGG - tig0040588:9074-9093 Msa1460020:intergenic 55.0%
! AGAAACGCGAGAGCGCATGG+CGG - tig0040588:5217-5236 Msa1460020:intergenic 60.0%
! GTGAGAAACGCGAGAGCGCA+TGG - tig0040588:5220-5239 Msa1460020:intergenic 60.0%
! CCAGCCTCTCCTAAGCACTG+TGG - tig0040588:6595-6614 Msa1460020:intergenic 60.0%
CCACAGTGCTTAGGAGAGGC+TGG + tig0040588:6592-6611 Msa1460020:intron 60.0%
! TAGGAAGAAGGCACGGGCCA+AGG + tig0040588:8974-8993 Msa1460020:CDS 60.0%
GCACGGGCCAAGGAACTTGA+GGG + tig0040588:8984-9003 Msa1460020:CDS 60.0%
GGCACGGGCCAAGGAACTTG+AGG + tig0040588:8983-9002 Msa1460020:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0040588 gene 4994 9379 4994 ID=Msa1460020;Name=Msa1460020
tig0040588 mRNA 4994 9379 4994 ID=Msa1460020-mRNA-1;Parent=Msa1460020;Name=Msa1460020-mRNA-1;_AED=0.21;_eAED=0.21;_QI=156|0.66|0.8|0.8|1|1|10|0|530
tig0040588 exon 4994 5256 4994 ID=Msa1460020-mRNA-1:exon:22524;Parent=Msa1460020-mRNA-1
tig0040588 exon 5350 5455 5350 ID=Msa1460020-mRNA-1:exon:22525;Parent=Msa1460020-mRNA-1
tig0040588 exon 6598 6902 6598 ID=Msa1460020-mRNA-1:exon:22526;Parent=Msa1460020-mRNA-1
tig0040588 exon 7064 7169 7064 ID=Msa1460020-mRNA-1:exon:22527;Parent=Msa1460020-mRNA-1
tig0040588 exon 7266 7616 7266 ID=Msa1460020-mRNA-1:exon:22528;Parent=Msa1460020-mRNA-1
tig0040588 exon 7837 7919 7837 ID=Msa1460020-mRNA-1:exon:22529;Parent=Msa1460020-mRNA-1
tig0040588 exon 7999 8123 7999 ID=Msa1460020-mRNA-1:exon:22530;Parent=Msa1460020-mRNA-1
tig0040588 exon 8232 8327 8232 ID=Msa1460020-mRNA-1:exon:22531;Parent=Msa1460020-mRNA-1
tig0040588 exon 8958 9245 8958 ID=Msa1460020-mRNA-1:exon:22532;Parent=Msa1460020-mRNA-1
tig0040588 exon 9354 9379 9354 ID=Msa1460020-mRNA-1:exon:22533;Parent=Msa1460020-mRNA-1
tig0040588 five_prime_UTR 4994 5149 4994 ID=Msa1460020-mRNA-1:five_prime_utr;Parent=Msa1460020-mRNA-1
tig0040588 CDS 5150 5256 5150 ID=Msa1460020-mRNA-1:cds;Parent=Msa1460020-mRNA-1
tig0040588 CDS 5350 5455 5350 ID=Msa1460020-mRNA-1:cds;Parent=Msa1460020-mRNA-1
tig0040588 CDS 6598 6902 6598 ID=Msa1460020-mRNA-1:cds;Parent=Msa1460020-mRNA-1
tig0040588 CDS 7064 7169 7064 ID=Msa1460020-mRNA-1:cds;Parent=Msa1460020-mRNA-1
tig0040588 CDS 7266 7616 7266 ID=Msa1460020-mRNA-1:cds;Parent=Msa1460020-mRNA-1
tig0040588 CDS 7837 7919 7837 ID=Msa1460020-mRNA-1:cds;Parent=Msa1460020-mRNA-1
tig0040588 CDS 7999 8123 7999 ID=Msa1460020-mRNA-1:cds;Parent=Msa1460020-mRNA-1
tig0040588 CDS 8232 8327 8232 ID=Msa1460020-mRNA-1:cds;Parent=Msa1460020-mRNA-1
tig0040588 CDS 8958 9245 8958 ID=Msa1460020-mRNA-1:cds;Parent=Msa1460020-mRNA-1
tig0040588 CDS 9354 9379 9354 ID=Msa1460020-mRNA-1:cds;Parent=Msa1460020-mRNA-1
Gene Sequence

>Msa1460020

ATGGCAGAAGATGGTATGAAGAAGATGAATGACGATGTCGACGCAGTTCAGTCTCAGATTGAAACCGCCATGCGCTCTCGCGTTTCTCACTTCAAGCAACAAGCCGATTCTTTGACATTTGCAAGTGTTCGTAGATTGCTCGAGAAAGATTTAGGGTTTGACGAGTTTTCTTTGGATTCTCACAAAAAATTTATCAAACAATCTTTAGACAAGTGCTTAGGAGAGGCTGGTGATGACGATGATGCCACAAAGACGTCTGAGGAGGACGGGGAAAAAGGTGAAAGTACACAAGAGACTGAAGGACAGAAGGAGGAACATCAATCTAAAGATGAAAAGGATCTCCCTGAAGATGAGGAGAAAATGGAAGATTCTCCGGTATTAGGTCTGCTTAAAGAACAAAAGGGGGGTAAACAAGGAACCAAGATAGCAGAAGGCAATGGGAAAAAAATAGTTCCAAATGAGACCCTAATTAAGAAAGCTATTAAAAAAAGATCTTCATACCTCAAGGCTAATGCAGAAAATGTAACTTTGGGTAGTCTTCGCCGATTATTGGAGGAAGATCTTAAACTTGATAAATTTTCTCTGGATCCCTTTAAGAAGTTTATAAGTAAAGAGCTTGATGAGGTATTAATGTCTTCTGAAGTTCCGGAACCTGCAGAAAGTGCTAAGAAAATTGTTAAGAAGAAACCTGATACTAAAGCAACTAAAAAGGTCAGTGCTGAAGATAACTCTGATACTTCAGATGAAGAGAGTGAAGAGGAAGATGAAGTCAAACCTAAAAAAAAAAGTGTTCCAAAAGGCAAGATGCAGACTCCTGTTGGACCCAAAAAGCGTAAAGGAGATGACACCAATCTACCCAGCAAGAAAAAGGTCAAGCCTGATAAAGCAGCATCAGAAGACAATAGTGATGCAGAAGACGATGGAAAAAACTCTGAAGATGATCAGTCCCATTCGTCAGCAGAGAATACTACCAAGAAGAAACAAGTTTCAACTCCAACTCCTGTGTACAGTAAACGTGTGGAGCACTTGAAATCTGTTATTAAAGCATGTGGGATGAGTGTTCCTCCCGTTATTTATAAAAAAGTCAAGCAGGTCCCTGAAAACAAACGGGACGGACAACTAATTAAAGAATTGGAAGAAATACTATCTAGAGAAGGCTTGTCTTCAAATCCATCTGAGAAGGGGGATCTTGGAGGAGCTGTAGTTATCAGCTATGCCCAATTATCTCTCACACAACCCAAACAATTGAAAGCTTTTCCTGTTTTCCAGTTTGATCCGGAAATCAAAGAAGTAAATAGGAAGAAGGCACGGGCCAAGGAACTTGAGGGTATTGATATGAGTAATATTGTGTCAAGTACACGTAGAAGGGCAACGATTAGTTTTGCGGCTCCTCCACCACCAAAGCCCAAGATTCCAGTGGAAACTAGTGGCAAAGATACCAAAGGTAGTGATAATGACAACGATGATGAAGGCAAAGAAAATGACGAGGAGGAAGAAGATGAAGAAGATGAAGAAGAGGAGGATAGCAGTGATGAGGATGGAAGTGAGAGTGAAGAATTTAATGCGGTGGTTAAGCAGTCTGTTGATGTTTAA

Protein sequence

>Msa1460020

MAEDGMKKMNDDVDAVQSQIETAMRSRVSHFKQQADSLTFASVRRLLEKDLGFDEFSLDSHKKFIKQSLDKCLGEAGDDDDATKTSEEDGEKGESTQETEGQKEEHQSKDEKDLPEDEEKMEDSPVLGLLKEQKGGKQGTKIAEGNGKKIVPNETLIKKAIKKRSSYLKANAENVTLGSLRRLLEEDLKLDKFSLDPFKKFISKELDEVLMSSEVPEPAESAKKIVKKKPDTKATKKVSAEDNSDTSDEESEEEDEVKPKKKSVPKGKMQTPVGPKKRKGDDTNLPSKKKVKPDKAASEDNSDAEDDGKNSEDDQSHSSAENTTKKKQVSTPTPVYSKRVEHLKSVIKACGMSVPPVIYKKVKQVPENKRDGQLIKELEEILSREGLSSNPSEKGDLGGAVVISYAQLSLTQPKQLKAFPVFQFDPEIKEVNRKKARAKELEGIDMSNIVSSTRRRATISFAAPPPPKPKIPVETSGKDTKGSDNDNDDEGKENDEEEEDEEDEEEEDSSDEDGSESEEFNAVVKQSVDV*