AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1023920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1023920 MtrunA17_Chr7g0241611 97.681 690 16 0 1 690 1 690 0.0 1399
Msa1023920 MtrunA17_Chr4g0005821 79.046 692 129 6 1 687 1 681 0.0 1078
Msa1023920 MtrunA17_Chr7g0259681 63.084 642 215 9 57 690 8 635 0.0 803
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1023920 AT3G09100.2 66.619 695 204 9 1 690 1 672 0.0 910
Msa1023920 AT5G01290.1 63.768 690 213 11 5 690 1 657 0.0 850
Msa1023920 AT5G28210.1 56.053 603 224 16 98 690 48 619 0.0 643
Msa1023920 AT3G09100.1 64.435 478 148 5 1 474 1 460 0.0 605

Find 192 sgRNAs with CRISPR-Local

Find 693 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTCCATCATATGATTTA+AGG 0.113031 7_1:+52214240 None:intergenic
TATATGACATGGAGCCTTTC+AGG 0.186417 7_1:-52208331 Msa1023920:CDS
CTGCTTTCAGATACTCAAAT+TGG 0.211849 7_1:-52211174 Msa1023920:CDS
ATGATTTAAGGATCTTATTA+TGG 0.232235 7_1:+52214252 None:intergenic
AATGACAAACGATGATGTTT+TGG 0.244746 7_1:-52211240 Msa1023920:CDS
TCAGACCCCATGCTTTATTC+TGG 0.261086 7_1:-52206721 Msa1023920:CDS
CTAGATGAATAGTTAGGTTT+AGG 0.263899 7_1:-52206174 Msa1023920:three_prime_UTR
ATGGTACCGTTCATGATTCC+TGG 0.271885 7_1:+52208373 None:intergenic
CCACTTTCTATGTGCTCTTC+TGG 0.283156 7_1:+52215233 None:intergenic
TTTCGGCATGATACCTTCTA+AGG 0.285277 7_1:-52213651 Msa1023920:CDS
ACTTAACAAAGAAAATTATA+AGG 0.289803 7_1:+52206134 None:intergenic
CGCAGATGGTCTCATATTTC+AGG 0.293837 7_1:-52208141 Msa1023920:intron
AACCGATACCGCTCAAATTC+AGG 0.297547 7_1:-52206221 Msa1023920:three_prime_UTR
GAGAGAGAAGTGTAACTATA+AGG 0.300832 7_1:+52216168 None:intergenic
GCAGGACAGACTATCGTTTC+AGG 0.301819 7_1:+52212338 None:intergenic
TAACCACAAGAAATGGTTTC+AGG 0.304021 7_1:+52206198 None:intergenic
CTTGAATGCCTCTCCTTTGC+CGG 0.304993 7_1:-52215336 Msa1023920:CDS
GTTCATCATATCATGTAATT+AGG 0.305570 7_1:-52206264 Msa1023920:three_prime_UTR
TTGGACCTGTCTAAAGAAAC+TGG 0.317774 7_1:+52210187 None:intergenic
CCGCCATCAGATCATATATT+AGG 0.327193 7_1:+52209298 None:intergenic
ACATTGTGCGCATTAGATAA+TGG 0.340793 7_1:+52212556 None:intergenic
ATATATGATGCTAATAACTA+TGG 0.345799 7_1:-52209595 Msa1023920:CDS
TTCTGCATTTACCTCCTTAG+TGG 0.350382 7_1:-52205975 Msa1023920:three_prime_UTR
TACTCAGGTTTATAGATTCC+TGG 0.355706 7_1:+52212398 None:intergenic
CACCACTTCACATTACTTGA+TGG 0.363178 7_1:-52209372 Msa1023920:CDS
TCATCATCGTCATCATTATC+TGG 0.364129 7_1:+52212260 None:intergenic
TCTTTCTTTAGATCTGATAC+TGG 0.364157 7_1:+52213265 None:intergenic
TGCTTTCAGATACTCAAATT+GGG 0.364970 7_1:-52211173 Msa1023920:CDS
CTTGTAAGTATTGAAGTCAT+TGG 0.367108 7_1:+52206621 None:intergenic
ACTTGCACGGGCCTGTCATC+TGG 0.368081 7_1:+52214305 None:intergenic
TCTTATCCTGTCGGCATACA+TGG 0.371242 7_1:+52206436 None:intergenic
CGTTGGCTTGCAGCTTGGTC+TGG 0.378002 7_1:-52213320 Msa1023920:intron
CCATTGAGATCAACAAGTTC+GGG 0.379557 7_1:+52212293 None:intergenic
TCACCCAATGGAACCTTAGA+AGG 0.388575 7_1:+52213638 None:intergenic
TGGAAATTGCATGTGTCCTC+TGG 0.394540 7_1:+52210219 None:intergenic
GTGTGTAATGACAATTTCTA+TGG 0.394814 7_1:-52215360 Msa1023920:exon
AATGCATCTTGCTGATCATT+AGG 0.395304 7_1:+52211206 None:intergenic
AGAGAGAAACAGTGACAGTT+AGG 0.396261 7_1:+52216140 None:intergenic
ATGATCAGCAAGATGCATTT+CGG 0.401431 7_1:-52211202 Msa1023920:CDS
ACCATTGAGATCAACAAGTT+CGG 0.403010 7_1:+52212292 None:intergenic
TCTCGTTTATTTCAGTCAAC+AGG 0.403952 7_1:+52206471 None:intergenic
TCAGATTAATATTCACATAC+AGG 0.404520 7_1:+52206041 None:intergenic
CTCCTTAGTGGAAGCTATGT+TGG 0.406529 7_1:-52205963 Msa1023920:three_prime_UTR
AGAGGACACATGCAATTTCC+AGG 0.406784 7_1:-52210217 Msa1023920:CDS
ATCTAGATAACCACAAGAAA+TGG 0.409012 7_1:+52206191 None:intergenic
TGGTTGGATTGCCCTTCGTC+TGG 0.413355 7_1:-52213683 Msa1023920:CDS
CTGAGCCGCGGCCCTTGCAT+TGG 0.430652 7_1:+52213105 None:intergenic
CTCTTCCACTCCGGAGTAGC+AGG 0.432247 7_1:+52212320 None:intergenic
GGTTATCTAGATGAATAGTT+AGG 0.433126 7_1:-52206180 Msa1023920:three_prime_UTR
CTGCTACTCCGGAGTGGAAG+AGG 0.435765 7_1:-52212319 Msa1023920:CDS
GTGGTTACAAATTGTTGAAA+GGG 0.436588 7_1:-52206110 Msa1023920:three_prime_UTR
GAAAGATCATCGAGTGTGCT+TGG 0.437704 7_1:-52206699 Msa1023920:CDS
TTGTAAGTATTGAAGTCATT+GGG 0.442744 7_1:+52206622 None:intergenic
TTCAAATGAGGTTTCCATGC+AGG 0.443363 7_1:-52209530 Msa1023920:CDS
AGAGGGTATCAAGCATGTTA+AGG 0.443861 7_1:-52213245 Msa1023920:intron
TCATTATTGTGTCAATCTCA+TGG 0.446224 7_1:+52211258 None:intergenic
GGGTTTATTGTTGCATTTGA+AGG 0.449536 7_1:-52207411 Msa1023920:intron
GGATTGCCCTTCGTCTGGCC+AGG 0.452831 7_1:-52213678 Msa1023920:CDS
GTATCATGCCGAAAATTTCC+TGG 0.453234 7_1:+52213660 None:intergenic
CACACCCAGTTTCTTTAGAC+AGG 0.457416 7_1:-52210192 Msa1023920:intron
AATGTCAATGTCTGTTACTC+AGG 0.460206 7_1:-52212538 Msa1023920:intron
CCAGAAGAGCACATAGAAAG+TGG 0.461582 7_1:-52215233 Msa1023920:CDS
GATACCTTCTAAGGTTCCAT+TGG 0.465384 7_1:-52213642 Msa1023920:CDS
GATAGTCTGTCCTGCTACTC+CGG 0.471499 7_1:-52212330 Msa1023920:CDS
TCTTCGACCTGGCCCTCAAA+AGG 0.473582 7_1:+52215299 None:intergenic
TCCTTAGTGGAAGCTATGTT+GGG 0.474664 7_1:-52205962 Msa1023920:three_prime_UTR
TCCATGTCATATATATAGTA+AGG 0.476655 7_1:+52208341 None:intergenic
TTTGAAGTTTGCGTGGTTTG+AGG 0.476850 7_1:-52215902 Msa1023920:intron
GGCCTGAATTTGAGCGGTAT+CGG 0.482718 7_1:+52206219 None:intergenic
AGTGGTTACAAATTGTTGAA+AGG 0.483792 7_1:-52206111 Msa1023920:three_prime_UTR
ATGCAGAATAACTTATACAT+TGG 0.484660 7_1:+52205990 None:intergenic
TGATTGACAGATGAATTATC+AGG 0.486142 7_1:+52213080 None:intergenic
ACCACTTCACATTACTTGAT+GGG 0.490316 7_1:-52209371 Msa1023920:CDS
CTTAACAAAGAAAATTATAA+GGG 0.490875 7_1:+52206135 None:intergenic
CTCATGAAGGTCTCTTAAAG+TGG 0.491856 7_1:-52207652 Msa1023920:CDS
CCCGAACTTGTTGATCTCAA+TGG 0.492780 7_1:-52212293 Msa1023920:CDS
ATACCTTCTAAGGTTCCATT+GGG 0.493016 7_1:-52213641 Msa1023920:CDS
TTATTTACATGCAGGTTGGT+TGG 0.495751 7_1:-52213699 Msa1023920:intron
CAACTGCGTGTCTGTGATAG+AGG 0.497145 7_1:-52209274 Msa1023920:intron
AGTATCAGATCTAAAGAAAG+AGG 0.498017 7_1:-52213263 Msa1023920:CDS
TCATGAGTACGAGGTACATA+AGG 0.503688 7_1:+52207668 None:intergenic
TGGTTATTTGAATTGTATTG+TGG 0.504212 7_1:-52215403 Msa1023920:five_prime_UTR
TGATGGAAGTAAGCTTCCTC+CGG 0.506250 7_1:-52214228 Msa1023920:CDS
AAAGCTAGTACAATTCTAGT+AGG 0.508928 7_1:-52216065 Msa1023920:intron
TCTGCGTCGTGTGAGAGCTT+CGG 0.511610 7_1:+52208158 None:intergenic
AAGATCCTTAAATCATATGA+TGG 0.512777 7_1:-52214245 Msa1023920:CDS
ATGTTGAAAGCTAGATCAAA+GGG 0.513533 7_1:-52206323 Msa1023920:three_prime_UTR
TGGAGCTGATATAGCTCGCC+GGG 0.516184 7_1:-52215213 Msa1023920:intron
TGGTACCGTTCATGATTCCT+GGG 0.518111 7_1:+52208374 None:intergenic
TATGAAATTCATACTTGCAA+CGG 0.519874 7_1:+52212218 None:intergenic
TCAAATGAGGTTTCCATGCA+GGG 0.525334 7_1:-52209529 Msa1023920:CDS
AAAGAAACTGGGTGTGACCC+TGG 0.527134 7_1:+52210199 None:intergenic
AGATTCAAGTTTCATTACAT+TGG 0.527636 7_1:-52206075 Msa1023920:three_prime_UTR
ATCTTTCCAGAATAAAGCAT+GGG 0.532742 7_1:+52206715 None:intergenic
ACATCATTTGCAACCCTGCA+TGG 0.534363 7_1:+52209516 None:intergenic
AAAGGATCTTCATCTTCCTC+CGG 0.535591 7_1:+52215317 None:intergenic
GCCTTCCCATGTATGCCGAC+AGG 0.536050 7_1:-52206442 Msa1023920:CDS
TGTGGCGGGTGAATGTTACT+TGG 0.537448 7_1:-52215385 Msa1023920:five_prime_UTR
CAGAACGGTTCTCAGAGTGA+TGG 0.537616 7_1:+52216089 None:intergenic
GTCTGTAAAGCTTTCACTGG+TGG 0.538117 7_1:-52206357 Msa1023920:three_prime_UTR
ATATGACATGGAGCCTTTCA+GGG 0.538294 7_1:-52208330 Msa1023920:intron
TCGGGAGCCCTCTTCCACTC+CGG 0.539359 7_1:+52212311 None:intergenic
AAAGAGAGCGTCCAGATGAC+AGG 0.539782 7_1:-52214316 Msa1023920:CDS
AGGTGGCTGTGATACTTGCA+CGG 0.543666 7_1:+52214292 None:intergenic
ATCTTCCACCGCTCACAGAA+AGG 0.545618 7_1:+52208419 None:intergenic
GCTTTCAGATACTCAAATTG+GGG 0.546530 7_1:-52211172 Msa1023920:CDS
TATAATGAATCAATATACTC+AGG 0.549904 7_1:+52212383 None:intergenic
TCTTCATCTTCCTCCGGCAA+AGG 0.550629 7_1:+52215323 None:intergenic
TCAGAAATGCATACCCTGAA+AGG 0.550897 7_1:+52208317 None:intergenic
GCTATCGATTCTTATCCTGT+CGG 0.551715 7_1:+52206427 None:intergenic
TATGTTGAAAGCTAGATCAA+AGG 0.553304 7_1:-52206324 Msa1023920:three_prime_UTR
GGTGGCTGTGATACTTGCAC+GGG 0.553801 7_1:+52214293 None:intergenic
TTCAGTCAACAGGACATCCT+CGG 0.555159 7_1:+52206481 None:intergenic
ATACCTAATATATGATCTGA+TGG 0.556235 7_1:-52209301 Msa1023920:CDS
TCTGTAAAGCTTTCACTGGT+GGG 0.556468 7_1:-52206356 Msa1023920:three_prime_UTR
AGTAATCAGTGAGGAACTCA+TGG 0.557728 7_1:-52206379 Msa1023920:exon
TAGATCCAATGCAAGGGCCG+CGG 0.559315 7_1:-52213110 Msa1023920:CDS
TGCTACTCCGGAGTGGAAGA+GGG 0.559470 7_1:-52212318 Msa1023920:CDS
CATACTTGCAACGGAGGACC+TGG 0.559887 7_1:+52212227 None:intergenic
GCAAAGGACATCATGTAGCT+AGG 0.560997 7_1:-52206406 Msa1023920:CDS
ATCTTCCTCCGGCAAAGGAG+AGG 0.560999 7_1:+52215328 None:intergenic
AAAGATCATCGAGTGTGCTT+GGG 0.561891 7_1:-52206698 Msa1023920:CDS
TCCTGTCGGCATACATGGGA+AGG 0.564005 7_1:+52206441 None:intergenic
AATGATGACGATGATGATGA+TGG 0.565460 7_1:-52212254 Msa1023920:CDS
TATGCAACATGGAAAGCTGA+TGG 0.568109 7_1:-52209624 Msa1023920:CDS
AGCAGCGGCCTTTCTGTGAG+CGG 0.568282 7_1:-52208427 Msa1023920:intron
AAGCTCTCACACGACGCAGA+TGG 0.569710 7_1:-52208155 Msa1023920:CDS
CAGATTAATATTCACATACA+GGG 0.570170 7_1:+52206042 None:intergenic
AAAATTTCCTGGCCAGACGA+AGG 0.570217 7_1:+52213671 None:intergenic
GCGCATTATACTCTTCGACC+TGG 0.572801 7_1:+52215288 None:intergenic
AAATTTCCTGGCCAGACGAA+GGG 0.572890 7_1:+52213672 None:intergenic
ATGGTCTGTAAAGCTTTCAC+TGG 0.574520 7_1:-52206360 Msa1023920:three_prime_UTR
CCCCATCAAGTAATGTGAAG+TGG 0.580537 7_1:+52209370 None:intergenic
ACACATGGTCACAATCGTAC+AGG 0.581359 7_1:-52212591 Msa1023920:CDS
ATGATGCTAATAACTATGGA+TGG 0.584416 7_1:-52209591 Msa1023920:CDS
GTGCAAGTATCACAGCCACC+TGG 0.585488 7_1:-52214290 Msa1023920:CDS
TATGTACCTCGTACTCATGA+AGG 0.587394 7_1:-52207665 Msa1023920:CDS
TGTGGTTTAGATCCAATGCA+AGG 0.587594 7_1:-52213117 Msa1023920:intron
TCCCAACATAGCTTCCACTA+AGG 0.587599 7_1:+52205961 None:intergenic
GATGATGATGATGGAGTACC+AGG 0.588112 7_1:-52212245 Msa1023920:CDS
AGGCCTGAAACCATTTCTTG+TGG 0.589994 7_1:-52206201 Msa1023920:three_prime_UTR
TGACTTCAATACTTACAAGA+AGG 0.590135 7_1:-52206617 Msa1023920:intron
CTTATCCTGTCGGCATACAT+GGG 0.592745 7_1:+52206437 None:intergenic
TTATTTGAATTGTATTGTGG+CGG 0.593201 7_1:-52215400 Msa1023920:five_prime_UTR
AGATCAAAGGGATCTACTGA+TGG 0.594850 7_1:-52206311 Msa1023920:three_prime_UTR
GATGGAAGTAAGCTTCCTCC+GGG 0.598868 7_1:-52214227 Msa1023920:intron
TTATAGATACCGTCTTATGT+AGG 0.600620 7_1:-52215428 Msa1023920:five_prime_UTR
AGGTAAAATATCGTCAGTGA+AGG 0.602869 7_1:+52213613 None:intergenic
GTGGAGCTGATATAGCTCGC+CGG 0.603735 7_1:-52215214 Msa1023920:CDS
GAATGCCTCTCCTTTGCCGG+AGG 0.607982 7_1:-52215333 Msa1023920:CDS
TCAGTGAAGGATTCACCCAA+TGG 0.608491 7_1:+52213626 None:intergenic
TATTTGAATTGTATTGTGGC+GGG 0.609126 7_1:-52215399 Msa1023920:five_prime_UTR
CCACTTCACATTACTTGATG+GGG 0.609587 7_1:-52209370 Msa1023920:CDS
GGCGGGTGAATGTTACTTGG+TGG 0.610796 7_1:-52215382 Msa1023920:five_prime_UTR
TTTCTGAATGTGCAGGCCAG+AGG 0.611157 7_1:-52210235 Msa1023920:intron
TCTGAAATGATTAGGTGAGG+AGG 0.612439 7_1:-52208232 Msa1023920:intron
TACATGATATGATGAACCGT+TGG 0.616735 7_1:+52206270 None:intergenic
GATCTTTCCAGAATAAAGCA+TGG 0.617360 7_1:+52206714 None:intergenic
ATAACCACACCTACATAAGA+CGG 0.620047 7_1:+52215419 None:intergenic
GTGGTTTAGATCCAATGCAA+GGG 0.629105 7_1:-52213116 Msa1023920:intron
CAACATAGCTTCCACTAAGG+AGG 0.629598 7_1:+52205964 None:intergenic
ATACTTGTTCATTGTACACA+TGG 0.630429 7_1:-52212606 Msa1023920:CDS
GAAATTCATACTTGCAACGG+AGG 0.631537 7_1:+52212221 None:intergenic
TCCTTACTATATATATGACA+TGG 0.631783 7_1:-52208342 Msa1023920:CDS
AGGATAAGAATCGATAGCAA+AGG 0.635554 7_1:-52206422 Msa1023920:CDS
GTTTCAGGCCTGAATTTGAG+CGG 0.636214 7_1:+52206213 None:intergenic
TATAGTAAGGATGTTTGCGA+TGG 0.637258 7_1:+52208354 None:intergenic
AGAGGAATTTGAAGTTTGCG+TGG 0.637839 7_1:-52215909 Msa1023920:five_prime_UTR
GTATCAGATCTAAAGAAAGA+GGG 0.640851 7_1:-52213262 Msa1023920:CDS
TGTCAATCACTTTGTGTACG+AGG 0.643052 7_1:-52213066 Msa1023920:intron
TACAAATGAACATCATCCAA+CGG 0.644001 7_1:-52206286 Msa1023920:three_prime_UTR
TCTGTCCTGCTACTCCGGAG+TGG 0.644223 7_1:-52212325 Msa1023920:CDS
TGGACCTGTCTAAAGAAACT+GGG 0.648364 7_1:+52210188 None:intergenic
GAGGACACATGCAATTTCCA+GGG 0.649406 7_1:-52210216 Msa1023920:CDS
AGAAAGAAGTGATTGAACCC+AGG 0.649900 7_1:-52208391 Msa1023920:CDS
ATGTTGCATAGTAGTAACGC+TGG 0.651191 7_1:+52209637 None:intergenic
AACGTGAAGAAAGAAAGAAA+CGG 0.652918 7_1:-52214343 Msa1023920:CDS
GCGCAATATACTCTTCGACC+TGG 0.662702 7_1:+52215255 None:intergenic
AGCGTTACTACTATGCAACA+TGG 0.671428 7_1:-52209635 Msa1023920:CDS
CTTTCAGATACTCAAATTGG+GGG 0.674339 7_1:-52211171 Msa1023920:CDS
AATTATCAGGTACTGAGCCG+CGG 0.676080 7_1:+52213093 None:intergenic
TGTCGGCATACATGGGAAGG+CGG 0.676239 7_1:+52206444 None:intergenic
GATACCGTCTTATGTAGGTG+TGG 0.677078 7_1:-52215423 Msa1023920:five_prime_UTR
ATCATCGAGTGTGCTTGGGA+TGG 0.677706 7_1:-52206694 Msa1023920:CDS
TTGAACCCAGGAATCATGAA+CGG 0.698189 7_1:-52208379 Msa1023920:CDS
TCTTTCCAGAATAAAGCATG+GGG 0.710208 7_1:+52206716 None:intergenic
CCTAATATATGATCTGATGG+CGG 0.716701 7_1:-52209298 Msa1023920:CDS
AAGAGACCTTCATGAGTACG+AGG 0.716715 7_1:+52207659 None:intergenic
TCAGGTTTATAGATTCCTGG+AGG 0.718001 7_1:+52212401 None:intergenic
GGGATGGTGATAGAAACGAA+TGG 0.727257 7_1:-52206678 Msa1023920:CDS
CATAAAAGACAATATCACCG+AGG 0.749317 7_1:-52206498 Msa1023920:CDS
CTAGGCGAAAGTAATCAGTG+AGG 0.795658 7_1:-52206388 Msa1023920:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTCATTTTTTTTTTTTCA+AGG - chr7_1:52211646-52211665 Msa1023920:intron 10.0%
!! AAATCACAATTTAAAAAAAA+GGG + chr7_1:52211879-52211898 None:intergenic 10.0%
!! AAAATCACAATTTAAAAAAA+AGG + chr7_1:52211880-52211899 None:intergenic 10.0%
!!! AATAATGAAAACAATTATTT+TGG + chr7_1:52212221-52212240 None:intergenic 10.0%
!! AAATTGAAAATAAGAAAAAA+AGG + chr7_1:52213075-52213094 None:intergenic 10.0%
!!! TTAATTTAGTTTATTTTCTA+TGG - chr7_1:52213184-52213203 Msa1023920:intron 10.0%
!!! TTTGTTATAAATATACAAAT+AGG - chr7_1:52214974-52214993 Msa1023920:intron 10.0%
!!! TATATGAAGTATTTTTCATA+AGG - chr7_1:52206540-52206559 Msa1023920:intron 15.0%
!! TAAATAGTTAAGGATATAAT+AGG - chr7_1:52207568-52207587 Msa1023920:intron 15.0%
!! AAGTAACATTAATATTTCAT+TGG - chr7_1:52207593-52207612 Msa1023920:intron 15.0%
!!! AGTTATTCTAAAATTTGTTT+TGG - chr7_1:52208210-52208229 Msa1023920:CDS 15.0%
!!! GTTATTCTAAAATTTGTTTT+GGG - chr7_1:52208211-52208230 Msa1023920:CDS 15.0%
!! TAAATATATCAAATGTCTTA+AGG + chr7_1:52208386-52208405 None:intergenic 15.0%
!!! TTTTCATATAAGTTTTAGTA+CGG - chr7_1:52208686-52208705 Msa1023920:intron 15.0%
!! CTATATACTTAAAAAACATA+TGG + chr7_1:52209001-52209020 None:intergenic 15.0%
!! TCTATCTAATTAATATTAGT+TGG - chr7_1:52209385-52209404 Msa1023920:CDS 15.0%
!! AATCACAATTTAAAAAAAAG+GGG + chr7_1:52211878-52211897 None:intergenic 15.0%
!! GATATATTATATTAACAAAG+TGG - chr7_1:52212060-52212079 Msa1023920:intron 15.0%
!! TTTCCTTATTAACAAATTTA+TGG - chr7_1:52213724-52213743 Msa1023920:intron 15.0%
!!! TAACCATAAATTTGTTAATA+AGG + chr7_1:52213730-52213749 None:intergenic 15.0%
!! CTTAACAAAGAAAATTATAA+GGG + chr7_1:52216062-52216081 None:intergenic 15.0%
!! ACTTAACAAAGAAAATTATA+AGG + chr7_1:52216063-52216082 None:intergenic 15.0%
!!! TATCTAGTTTTTTTTTTGAA+TGG - chr7_1:52216262-52216281 Msa1023920:five_prime_UTR 15.0%
!!! GTTTATTTTTGTTTTTACTC+AGG - chr7_1:52206227-52206246 Msa1023920:three_prime_UTR 20.0%
!!! AATTAGTTAATTCTAGTTGT+TGG - chr7_1:52206416-52206435 Msa1023920:CDS 20.0%
!!! ATTAGTTAATTCTAGTTGTT+GGG - chr7_1:52206417-52206436 Msa1023920:CDS 20.0%
!!! AAGGATTTAGTAATTTTTCT+AGG - chr7_1:52206559-52206578 Msa1023920:intron 20.0%
!!! ATTTTTCTAGGAGAATTTTT+TGG - chr7_1:52206571-52206590 Msa1023920:intron 20.0%
!!! TTGAATTAATTTTCCTTACA+GGG + chr7_1:52206624-52206643 None:intergenic 20.0%
!!! TTTGAATTAATTTTCCTTAC+AGG + chr7_1:52206625-52206644 None:intergenic 20.0%
!!! ATAGGATTGATAATATGAAT+TGG - chr7_1:52206729-52206748 Msa1023920:CDS 20.0%
!! CAAAAAATATCATGAAATAG+CGG + chr7_1:52207285-52207304 None:intergenic 20.0%
!! GAGAGAATAATAAATAGTTA+AGG - chr7_1:52207558-52207577 Msa1023920:intron 20.0%
!!! TTCTAAAATGACATACAATT+TGG - chr7_1:52207653-52207672 Msa1023920:CDS 20.0%
!!! TCTAAAATGACATACAATTT+GGG - chr7_1:52207654-52207673 Msa1023920:CDS 20.0%
!!! TTATTTTCATAAGGTTTAGT+TGG - chr7_1:52207690-52207709 Msa1023920:intron 20.0%
!!! TATTTTCATAAGGTTTAGTT+GGG - chr7_1:52207691-52207710 Msa1023920:intron 20.0%
!! ATGATTTAAGGATCTTATTA+TGG + chr7_1:52207945-52207964 None:intergenic 20.0%
!! TATACAATTCCATTTATCTT+TGG - chr7_1:52208125-52208144 Msa1023920:intron 20.0%
!! ATACAATTCCATTTATCTTT+GGG - chr7_1:52208126-52208145 Msa1023920:intron 20.0%
!! ATAAATATCCCAAAGATAAA+TGG + chr7_1:52208137-52208156 None:intergenic 20.0%
!!! GATTTTCTATTTATAAATGC+TGG - chr7_1:52208337-52208356 Msa1023920:CDS 20.0%
!! TCATTATATTATTTACATGC+AGG - chr7_1:52208487-52208506 Msa1023920:intron 20.0%
!! ATGAAACAATGAAAGAAAAA+AGG - chr7_1:52208740-52208759 Msa1023920:intron 20.0%
!! TGAAACAATGAAAGAAAAAA+GGG - chr7_1:52208741-52208760 Msa1023920:intron 20.0%
!! AACGTAACAAATTGTAAAAA+AGG + chr7_1:52208858-52208877 None:intergenic 20.0%
!!! TTTTTTACAATTTGTTACGT+TGG - chr7_1:52208857-52208876 Msa1023920:intron 20.0%
!! TACTTAAAAAACATATGGTT+GGG + chr7_1:52208996-52209015 None:intergenic 20.0%
!! ATACTTAAAAAACATATGGT+TGG + chr7_1:52208997-52209016 None:intergenic 20.0%
!! ATAGTATACCTTTATATAAG+TGG - chr7_1:52209017-52209036 Msa1023920:intron 20.0%
!! TAGTATACCTTTATATAAGT+GGG - chr7_1:52209018-52209037 Msa1023920:intron 20.0%
!!! TTGAGTTATTTTGAAGAATA+TGG - chr7_1:52209184-52209203 Msa1023920:intron 20.0%
!! ATGAAATCAATGCATTAAAT+AGG + chr7_1:52209314-52209333 None:intergenic 20.0%
!! TGGAATTGAAAATAATCATA+CGG + chr7_1:52209525-52209544 None:intergenic 20.0%
!! TATAATGAATCAATATACTC+AGG + chr7_1:52209814-52209833 None:intergenic 20.0%
!! AAATAAATAAATCTTCCAGT+TGG + chr7_1:52210138-52210157 None:intergenic 20.0%
!!! AACATTCTAAAAACTTTCTT+TGG - chr7_1:52210185-52210204 Msa1023920:intron 20.0%
!!! ACATTCTAAAAACTTTCTTT+GGG - chr7_1:52210186-52210205 Msa1023920:intron 20.0%
!!! AATTTTCCTTTGGAATAATA+TGG - chr7_1:52210293-52210312 Msa1023920:intron 20.0%
!!! GTATTGATTTTTCTAGATTT+TGG - chr7_1:52210366-52210385 Msa1023920:intron 20.0%
!!! CTAGATTTTGGAAAAAATAA+CGG - chr7_1:52210378-52210397 Msa1023920:intron 20.0%
!!! TAGATTTTGGAAAAAATAAC+GGG - chr7_1:52210379-52210398 Msa1023920:intron 20.0%
!! ATAAAGATTTAATTACCATC+AGG + chr7_1:52210892-52210911 None:intergenic 20.0%
!!! TAATTTTTGCTATGCAATTT+AGG + chr7_1:52211370-52211389 None:intergenic 20.0%
!! TGCATAGCAAAAATTAAATT+TGG - chr7_1:52211374-52211393 Msa1023920:intron 20.0%
!! ATAGCAAAAATTAAATTTGG+TGG - chr7_1:52211377-52211396 Msa1023920:intron 20.0%
!! TAGCAAAAATTAAATTTGGT+GGG - chr7_1:52211378-52211397 Msa1023920:intron 20.0%
!!! TTTTTTTTTTTCAAGGTGTT+TGG - chr7_1:52211653-52211672 Msa1023920:intron 20.0%
!! ATCACAATTTAAAAAAAAGG+GGG + chr7_1:52211877-52211896 None:intergenic 20.0%
!! AGATACATTAATAAGGTAAA+GGG + chr7_1:52211922-52211941 None:intergenic 20.0%
!! ATCAATATATAGCATGTTAA+TGG + chr7_1:52212043-52212062 None:intergenic 20.0%
!! TTAACATACTATGGATAAAA+AGG + chr7_1:52212495-52212514 None:intergenic 20.0%
!! CAACAAAATTTAACATACTA+TGG + chr7_1:52212504-52212523 None:intergenic 20.0%
!! ATATATGATGCTAATAACTA+TGG - chr7_1:52212599-52212618 Msa1023920:CDS 20.0%
!!! ATAGAAACTTCAATTTTAGA+AGG - chr7_1:52212640-52212659 Msa1023920:CDS 20.0%
!! CTAATACTGTTAATTTAAAG+TGG - chr7_1:52212716-52212735 Msa1023920:intron 20.0%
!!! ATTTAAAGTGGAATTTAAAG+TGG - chr7_1:52212728-52212747 Msa1023920:intron 20.0%
!! ACATTATGATATACAAAAGT+AGG - chr7_1:52213375-52213394 Msa1023920:intron 20.0%
!! CATTATGATATACAAAAGTA+GGG - chr7_1:52213376-52213395 Msa1023920:intron 20.0%
!! TAACAAATTTATGGTTAATC+TGG - chr7_1:52213733-52213752 Msa1023920:intron 20.0%
!!! GATATATATCTGAAATGATT+AGG - chr7_1:52213954-52213973 Msa1023920:intron 20.0%
!! ACAAAATAAATTGAATGAGT+TGG + chr7_1:52214841-52214860 None:intergenic 20.0%
!! AAATATACAAATAGGACAAT+TGG - chr7_1:52214982-52215001 Msa1023920:intron 20.0%
!!! TCATGTTTTTTTAGTTCATT+CGG - chr7_1:52215407-52215426 Msa1023920:five_prime_UTR 20.0%
!! AAAAGGAAATTCAAAATCAA+AGG + chr7_1:52215616-52215635 None:intergenic 20.0%
!!! TAATTTTCTTTGTTAAGTAG+TGG - chr7_1:52216065-52216084 Msa1023920:intron 20.0%
! GTTTGAAGAAAAAGTGATTA+TGG + chr7_1:52205954-52205973 None:intergenic 25.0%
!!! AGGTTTTGTTAATTTGTTTC+AGG - chr7_1:52206247-52206266 Msa1023920:three_prime_UTR 25.0%
!!! TTTTGATGTTTGTTGAAGTT+AGG - chr7_1:52206353-52206372 Msa1023920:three_prime_UTR 25.0%
!! AGAGAAATATGTGATTTTGT+TGG - chr7_1:52206460-52206479 Msa1023920:CDS 25.0%
!! GAGAAATATGTGATTTTGTT+GGG - chr7_1:52206461-52206480 Msa1023920:CDS 25.0%
! TGGTTATTTGAATTGTATTG+TGG - chr7_1:52206791-52206810 Msa1023920:intron 25.0%
! TTATTTGAATTGTATTGTGG+CGG - chr7_1:52206794-52206813 Msa1023920:intron 25.0%
! AAGTAAGAATAGAGAAGAAA+GGG + chr7_1:52207009-52207028 None:intergenic 25.0%
! AAAGTAAGAATAGAGAAGAA+AGG + chr7_1:52207010-52207029 None:intergenic 25.0%
! CAATCAATGTTGTTAAATAG+CGG + chr7_1:52207371-52207390 None:intergenic 25.0%
!! TTTAACAACATTGATTGGTA+TGG - chr7_1:52207374-52207393 Msa1023920:intron 25.0%
! ATTGTCCGTAATAAATGATA+TGG - chr7_1:52207508-52207527 Msa1023920:intron 25.0%
! TTGTCCGTAATAAATGATAT+GGG - chr7_1:52207509-52207528 Msa1023920:intron 25.0%
! TTGTAAAGCGACATATAATT+TGG - chr7_1:52207618-52207637 Msa1023920:CDS 25.0%
! TGTAAAGCGACATATAATTT+GGG - chr7_1:52207619-52207638 Msa1023920:CDS 25.0%
!!! GAATCCAATTTCATTTTGAT+GGG - chr7_1:52207713-52207732 Msa1023920:intron 25.0%
! ATAACCCATCAAAATGAAAT+TGG + chr7_1:52207720-52207739 None:intergenic 25.0%
!!! ATTTTGATGGGTTATTTTTG+TGG - chr7_1:52207725-52207744 Msa1023920:intron 25.0%
!! TGAACGAAAATGTATAGTTT+TGG + chr7_1:52207796-52207815 None:intergenic 25.0%
! AAAAAATTATCATATCCAGG+TGG + chr7_1:52207922-52207941 None:intergenic 25.0%
! TGGAAAAAATTATCATATCC+AGG + chr7_1:52207925-52207944 None:intergenic 25.0%
! AAGATCCTTAAATCATATGA+TGG - chr7_1:52207949-52207968 Msa1023920:intron 25.0%
! TACTTCCATCATATGATTTA+AGG + chr7_1:52207957-52207976 None:intergenic 25.0%
! ATAACCAGTCTTTATTGAAA+TGG - chr7_1:52208085-52208104 Msa1023920:intron 25.0%
! TTTACCATTTCAATAAAGAC+TGG + chr7_1:52208092-52208111 None:intergenic 25.0%
! TCTTTATTGAAATGGTAAAC+TGG - chr7_1:52208093-52208112 Msa1023920:intron 25.0%
!!! TTGTTTTGGGTGAATAAAAT+TGG - chr7_1:52208224-52208243 Msa1023920:intron 25.0%
! TTTCTATTTATAAATGCTGG+TGG - chr7_1:52208340-52208359 Msa1023920:CDS 25.0%
! TATATTATTTACATGCAGGT+TGG - chr7_1:52208491-52208510 Msa1023920:intron 25.0%
! ACTTAAAAAACATATGGTTG+GGG + chr7_1:52208995-52209014 None:intergenic 25.0%
! CAAATGTAAGAACAAGAAAA+AGG + chr7_1:52209046-52209065 None:intergenic 25.0%
!! ATGGCATATATTTCTCTTTT+TGG - chr7_1:52209203-52209222 Msa1023920:intron 25.0%
!! TGGCATATATTTCTCTTTTT+GGG - chr7_1:52209204-52209223 Msa1023920:intron 25.0%
!! GTATGATTATTTTCAATTCC+AGG - chr7_1:52209524-52209543 Msa1023920:CDS 25.0%
! TATGAAATTCATACTTGCAA+CGG + chr7_1:52209979-52209998 None:intergenic 25.0%
! TGATATCTCGTATTATGAAT+AGG - chr7_1:52210030-52210049 Msa1023920:intron 25.0%
! TGTTAGAACTAATAGGAAAA+TGG + chr7_1:52210095-52210114 None:intergenic 25.0%
!!! AATACTTTGAAGTACTTGAT+TGG - chr7_1:52210434-52210453 Msa1023920:intron 25.0%
! TACAAAACCAATTAACAACT+AGG + chr7_1:52210595-52210614 None:intergenic 25.0%
!!! TGTTAATTGGTTTTGTACTT+AGG - chr7_1:52210598-52210617 Msa1023920:intron 25.0%
! TGAATATGAGTTCTCATATT+GGG - chr7_1:52210676-52210695 Msa1023920:intron 25.0%
!! TATGTCTTTCCTATTTTCTT+AGG - chr7_1:52210909-52210928 Msa1023920:intron 25.0%
! ATCAAAGGCAGATATTTAAA+AGG + chr7_1:52211059-52211078 None:intergenic 25.0%
! TAAAATAAGCTAATCCAAAC+GGG + chr7_1:52211186-52211205 None:intergenic 25.0%
! CTAAAATAAGCTAATCCAAA+CGG + chr7_1:52211187-52211206 None:intergenic 25.0%
!! ATGAAGATACAATTTTCGTT+AGG - chr7_1:52211271-52211290 Msa1023920:intron 25.0%
!! TGAAGATACAATTTTCGTTA+GGG - chr7_1:52211272-52211291 Msa1023920:intron 25.0%
!! AGCAAAAATTAAATTTGGTG+GGG - chr7_1:52211379-52211398 Msa1023920:intron 25.0%
!! ATTTATGTTTGCCTTATTGT+TGG - chr7_1:52211428-52211447 Msa1023920:intron 25.0%
!!! ATCTTATTGATTTCGCAATA+TGG + chr7_1:52211610-52211629 None:intergenic 25.0%
!! CAATAAGATTTTCTCTAAGT+TGG - chr7_1:52211621-52211640 Msa1023920:intron 25.0%
!! CTATCACCTAAACAAATTTT+TGG + chr7_1:52211679-52211698 None:intergenic 25.0%
! ACAAAATTCAACAATAGTCT+GGG + chr7_1:52211797-52211816 None:intergenic 25.0%
! ATACATTAATAAGGTAAAGG+GGG + chr7_1:52211920-52211939 None:intergenic 25.0%
! GATACATTAATAAGGTAAAG+GGG + chr7_1:52211921-52211940 None:intergenic 25.0%
! GAGATACATTAATAAGGTAA+AGG + chr7_1:52211923-52211942 None:intergenic 25.0%
! GCATTAGAGATACATTAATA+AGG + chr7_1:52211929-52211948 None:intergenic 25.0%
! TTATTAATTTCTGAATGTGC+AGG - chr7_1:52211952-52211971 Msa1023920:intron 25.0%
! TCTATTATCTCTTTGTTAGT+CGG + chr7_1:52212151-52212170 None:intergenic 25.0%
!! AATCACAACAGAAATCTTTT+TGG + chr7_1:52212350-52212369 None:intergenic 25.0%
! TTACTACATTTACTGAACTA+TGG + chr7_1:52212450-52212469 None:intergenic 25.0%
!!! ATTTTAGAAGGATTCAAATG+AGG - chr7_1:52212652-52212671 Msa1023920:intron 25.0%
!! CTGCTAATACACTTATATTT+TGG - chr7_1:52212773-52212792 Msa1023920:intron 25.0%
!!! ACTTATATTTTGGCTTTCAA+GGG - chr7_1:52212783-52212802 Msa1023920:intron 25.0%
! ATACCTAATATATGATCTGA+TGG - chr7_1:52212893-52212912 Msa1023920:intron 25.0%
! GCAAATAAAATTACACCTAA+GGG + chr7_1:52213023-52213042 None:intergenic 25.0%
! TGCAAATAAAATTACACCTA+AGG + chr7_1:52213024-52213043 None:intergenic 25.0%
!!! TATAGCTATTGTTTCTATAG+TGG - chr7_1:52213213-52213232 Msa1023920:intron 25.0%
! AGTATTTCACACATTAAAGT+GGG - chr7_1:52213466-52213485 Msa1023920:intron 25.0%
!! CCAAACATAAAATTGATTTC+AGG + chr7_1:52213633-52213652 None:intergenic 25.0%
!! CCTGAAATCAATTTTATGTT+TGG - chr7_1:52213630-52213649 Msa1023920:CDS 25.0%
!!! GGTTGATAAAATCAAATGTT+TGG - chr7_1:52213651-52213670 Msa1023920:CDS 25.0%
! TCCTTACTATATATATGACA+TGG - chr7_1:52213852-52213871 Msa1023920:intron 25.0%
! TCCATGTCATATATATAGTA+AGG + chr7_1:52213856-52213875 None:intergenic 25.0%
! TAACCAATATTTCAATCATG+TGG - chr7_1:52214179-52214198 Msa1023920:intron 25.0%
! GATATTAAGATTGCTATAGA+AGG + chr7_1:52214304-52214323 None:intergenic 25.0%
! AAGAAAAAGGAAATACTATG+TGG + chr7_1:52214440-52214459 None:intergenic 25.0%
! GAATATCTACAATGTATGTT+TGG - chr7_1:52214870-52214889 Msa1023920:intron 25.0%
!! AATGTATGTTTGGAATATCA+GGG - chr7_1:52214880-52214899 Msa1023920:intron 25.0%
! TGGTTGAAGTTATAGTATTT+AGG + chr7_1:52215099-52215118 None:intergenic 25.0%
! TTCTTGCTTCATTATAGAAT+AGG - chr7_1:52215155-52215174 Msa1023920:intron 25.0%
! AAATTCTATTATGTCTAGTC+AGG - chr7_1:52215178-52215197 Msa1023920:intron 25.0%
! GAACTAAAAAAACATGACAA+GGG + chr7_1:52215404-52215423 None:intergenic 25.0%
! TGAACTAAAAAAACATGACA+AGG + chr7_1:52215405-52215424 None:intergenic 25.0%
!!! TTGTAAGTATTGAAGTCATT+GGG + chr7_1:52215575-52215594 None:intergenic 25.0%
! AAATTCAAAATCAAAGGAGT+TGG + chr7_1:52215610-52215629 None:intergenic 25.0%
! ATACAAAATCAGAGAGAAAA+AGG + chr7_1:52215633-52215652 None:intergenic 25.0%
! GTTCATCATATCATGTAATT+AGG - chr7_1:52215930-52215949 Msa1023920:intron 25.0%
!! AGATTCAAGTTTCATTACAT+TGG - chr7_1:52216119-52216138 Msa1023920:five_prime_UTR 25.0%
! CAGATTAATATTCACATACA+GGG + chr7_1:52216155-52216174 None:intergenic 25.0%
! TCAGATTAATATTCACATAC+AGG + chr7_1:52216156-52216175 None:intergenic 25.0%
! ATGCAGAATAACTTATACAT+TGG + chr7_1:52216207-52216226 None:intergenic 25.0%
!!! ATTGTACTAGCTTTTCAGAA+CGG + chr7_1:52206123-52206142 None:intergenic 30.0%
AAAGCTAGTACAATTCTAGT+AGG - chr7_1:52206129-52206148 Msa1023920:three_prime_UTR 30.0%
TAGTACAATTCTAGTAGGTA+GGG - chr7_1:52206134-52206153 Msa1023920:three_prime_UTR 30.0%
!!! AGGTTTGAAGTTTTTTGAAG+AGG - chr7_1:52206267-52206286 Msa1023920:three_prime_UTR 30.0%
!!! AGGAGAATTTTTTGGTACAT+AGG - chr7_1:52206579-52206598 Msa1023920:intron 30.0%
!!! GGAGAATTTTTTGGTACATA+GGG - chr7_1:52206580-52206599 Msa1023920:intron 30.0%
ATAACACGGCATTAAATGAT+TGG - chr7_1:52206681-52206700 Msa1023920:CDS 30.0%
! TTGATAATATGAATTGGTGC+AGG - chr7_1:52206735-52206754 Msa1023920:intron 30.0%
TTATAGATACCGTCTTATGT+AGG - chr7_1:52206766-52206785 Msa1023920:intron 30.0%
TATTTGAATTGTATTGTGGC+GGG - chr7_1:52206795-52206814 Msa1023920:intron 30.0%
GTGTGTAATGACAATTTCTA+TGG - chr7_1:52206834-52206853 Msa1023920:intron 30.0%
CACACAGTATCAAACATAAA+AGG + chr7_1:52207040-52207059 None:intergenic 30.0%
! CTTTTATGTTTGATACTGTG+TGG - chr7_1:52207038-52207057 Msa1023920:intron 30.0%
TGGTTTATGATCGAACATTA+TGG - chr7_1:52207058-52207077 Msa1023920:intron 30.0%
TTGTTTGATACTGTCATGAT+TGG - chr7_1:52207139-52207158 Msa1023920:intron 30.0%
! TCATGATTGGTGATTTAAGT+TGG - chr7_1:52207152-52207171 Msa1023920:intron 30.0%
CGCTATTTAACAACATTGAT+TGG - chr7_1:52207369-52207388 Msa1023920:intron 30.0%
CTGTCCCATATCATTTATTA+CGG + chr7_1:52207516-52207535 None:intergenic 30.0%
AAATGACATACAATTTGGGA+CGG - chr7_1:52207658-52207677 Msa1023920:CDS 30.0%
!! AGGGAGTAGTTATTTTCATA+AGG - chr7_1:52207681-52207700 Msa1023920:CDS 30.0%
! GGAATCCAATTTCATTTTGA+TGG - chr7_1:52207712-52207731 Msa1023920:intron 30.0%
AACGTGAAGAAAGAAAGAAA+CGG - chr7_1:52207851-52207870 Msa1023920:intron 30.0%
AATAAAGCAAATAGCATCTG+AGG + chr7_1:52208166-52208185 None:intergenic 30.0%
! CAAGCATTTTGTGTTCTTTT+GGG - chr7_1:52208268-52208287 Msa1023920:intron 30.0%
! AAGCATTTTGTGTTCTTTTG+GGG - chr7_1:52208269-52208288 Msa1023920:intron 30.0%
CTCTGCATTATGTATTTGAT+AGG + chr7_1:52208317-52208336 None:intergenic 30.0%
CTATCAAATACATAATGCAG+AGG - chr7_1:52208315-52208334 Msa1023920:intron 30.0%
! CTAAATGAGTATCTTTTACC+AGG + chr7_1:52208604-52208623 None:intergenic 30.0%
! ATACATCAACAGAGAGTTTT+AGG - chr7_1:52208631-52208650 Msa1023920:intron 30.0%
! TACATCAACAGAGAGTTTTA+GGG - chr7_1:52208632-52208651 Msa1023920:intron 30.0%
!! TCATATAAGTTTTAGTACGG+TGG - chr7_1:52208689-52208708 Msa1023920:intron 30.0%
TCTTTCTTTAGATCTGATAC+TGG + chr7_1:52208932-52208951 None:intergenic 30.0%
AGTATCAGATCTAAAGAAAG+AGG - chr7_1:52208931-52208950 Msa1023920:intron 30.0%
GTATCAGATCTAAAGAAAGA+GGG - chr7_1:52208932-52208951 Msa1023920:intron 30.0%
TGATTGACAGATGAATTATC+AGG + chr7_1:52209117-52209136 None:intergenic 30.0%
! GGCATATATTTCTCTTTTTG+GGG - chr7_1:52209205-52209224 Msa1023920:intron 30.0%
!!! TATATTTCTCTTTTTGGGGT+AGG - chr7_1:52209209-52209228 Msa1023920:intron 30.0%
ACGATAAAAATTGTCTAACC+TGG + chr7_1:52209545-52209564 None:intergenic 30.0%
ATACTTGTTCATTGTACACA+TGG - chr7_1:52209588-52209607 Msa1023920:CDS 30.0%
! ATTTTTATCGCCTGTAAAGA+AGG + chr7_1:52209757-52209776 None:intergenic 30.0%
!! TTCCTATTAGTTCTAACACA+TGG - chr7_1:52210097-52210116 Msa1023920:intron 30.0%
AACCATGTGTTAGAACTAAT+AGG + chr7_1:52210102-52210121 None:intergenic 30.0%
!! ATTAGTTCTAACACATGGTT+TGG - chr7_1:52210102-52210121 Msa1023920:intron 30.0%
!! TTAGTTCTAACACATGGTTT+GGG - chr7_1:52210103-52210122 Msa1023920:intron 30.0%
!! TCTAATTGTTTCTACCTTGT+AGG - chr7_1:52210265-52210284 Msa1023920:intron 30.0%
!! CTAATTGTTTCTACCTTGTA+GGG - chr7_1:52210266-52210285 Msa1023920:intron 30.0%
! TGATTGGATTAGAGTAAAAG+TGG - chr7_1:52210450-52210469 Msa1023920:intron 30.0%
! GATTGGATTAGAGTAAAAGT+GGG - chr7_1:52210451-52210470 Msa1023920:intron 30.0%
TACCTCTATAGATATGCTAT+GGG - chr7_1:52210478-52210497 Msa1023920:intron 30.0%
!!! TTTTGCTCATGACTTTTTCA+AGG - chr7_1:52210538-52210557 Msa1023920:intron 30.0%
!!! TTTGCTCATGACTTTTTCAA+GGG - chr7_1:52210539-52210558 Msa1023920:intron 30.0%
TCTTGAACCTAGTTGTTAAT+TGG - chr7_1:52210585-52210604 Msa1023920:intron 30.0%
CTGAATATGAGTTCTCATAT+TGG - chr7_1:52210675-52210694 Msa1023920:intron 30.0%
GACTCGTGTTCTATATATAT+GGG + chr7_1:52210713-52210732 None:intergenic 30.0%
TGACTCGTGTTCTATATATA+TGG + chr7_1:52210714-52210733 None:intergenic 30.0%
AACAGAATAGAGAAATAGTC+CGG - chr7_1:52210793-52210812 Msa1023920:intron 30.0%
!!! TAACTGTTTAGTTTTTCTCG+AGG + chr7_1:52210840-52210859 None:intergenic 30.0%
!! TATCGAATCATTTTTCCTGA+TGG - chr7_1:52210874-52210893 Msa1023920:intron 30.0%
TCATTATTGTGTCAATCTCA+TGG + chr7_1:52210939-52210958 None:intergenic 30.0%
! AATGACAAACGATGATGTTT+TGG - chr7_1:52210954-52210973 Msa1023920:intron 30.0%
! ATGACAAACGATGATGTTTT+GGG - chr7_1:52210955-52210974 Msa1023920:intron 30.0%
TGCTTTCAGATACTCAAATT+GGG - chr7_1:52211021-52211040 Msa1023920:intron 30.0%
ATACTAATCTCACACATCAA+AGG + chr7_1:52211074-52211093 None:intergenic 30.0%
TGATGTGTGAGATTAGTATT+TGG - chr7_1:52211075-52211094 Msa1023920:intron 30.0%
! CTTCACTACTTGTTTGTTAA+GGG - chr7_1:52211160-52211179 Msa1023920:intron 30.0%
TTTCATAAGCTCAAACCAAA+CGG - chr7_1:52211342-52211361 Msa1023920:intron 30.0%
CACAATTGTAACCAACAATA+AGG + chr7_1:52211442-52211461 None:intergenic 30.0%
! TTGTTATTCCATGTTTGTAG+AGG - chr7_1:52211496-52211515 Msa1023920:intron 30.0%
CATTAAAACCTCTACAAACA+TGG + chr7_1:52211507-52211526 None:intergenic 30.0%
! GTTTGGCCAAAAATTTGTTT+AGG - chr7_1:52211670-52211689 Msa1023920:intron 30.0%
! TGTATACAATTTTGCTTCCT+AGG + chr7_1:52211750-52211769 None:intergenic 30.0%
CACAAAATTCAACAATAGTC+TGG + chr7_1:52211798-52211817 None:intergenic 30.0%
AACCTTAACTTCTGATAACA+TGG - chr7_1:52211836-52211855 Msa1023920:intron 30.0%
AACCATGTTATCAGAAGTTA+AGG + chr7_1:52211841-52211860 None:intergenic 30.0%
AAATGAACCATTCATTCTGA+AGG + chr7_1:52212285-52212304 None:intergenic 30.0%
ATGATGCTAATAACTATGGA+TGG - chr7_1:52212603-52212622 Msa1023920:CDS 30.0%
!!! CACTTATATTTTGGCTTTCA+AGG - chr7_1:52212782-52212801 Msa1023920:intron 30.0%
!!! AATACTTGCTGTTCTCATTT+TGG - chr7_1:52212970-52212989 Msa1023920:intron 30.0%
AAAGAAGAAACTGCTATGTA+AGG + chr7_1:52213164-52213183 None:intergenic 30.0%
CAAACAGAAAGCAAAGTAAA+TGG + chr7_1:52213289-52213308 None:intergenic 30.0%
CAGTATTTCACACATTAAAG+TGG - chr7_1:52213465-52213484 Msa1023920:intron 30.0%
! ATTTTAAATAGACCATGCTG+TGG - chr7_1:52213571-52213590 Msa1023920:CDS 30.0%
!! TTTATTTTTCACCTGGTAGT+TGG - chr7_1:52213926-52213945 Msa1023920:intron 30.0%
TATATCAATAACCAACTACC+AGG + chr7_1:52213940-52213959 None:intergenic 30.0%
! ATATCTGAAATGATTAGGTG+AGG - chr7_1:52213959-52213978 Msa1023920:intron 30.0%
AAGCCACATGATTGAAATAT+TGG + chr7_1:52214185-52214204 None:intergenic 30.0%
! TTAAGATATTTTTCCCCCAT+TGG - chr7_1:52214212-52214231 Msa1023920:intron 30.0%
TATCCATTCTCATGCTAAAT+AGG + chr7_1:52214273-52214292 None:intergenic 30.0%
ATATACGATGTCTCTTTAAC+TGG + chr7_1:52214336-52214355 None:intergenic 30.0%
AAAGGAAATACTATGTGGTA+AGG + chr7_1:52214435-52214454 None:intergenic 30.0%
TACTAACAATGTTTACGATC+AGG - chr7_1:52214492-52214511 Msa1023920:intron 30.0%
ACTAACAATGTTTACGATCA+GGG - chr7_1:52214493-52214512 Msa1023920:intron 30.0%
!! TTCAGTTGATTTTCTCTTTG+AGG - chr7_1:52214582-52214601 Msa1023920:intron 30.0%
AGAAGTGACTAAATTGTAAG+TGG + chr7_1:52214653-52214672 None:intergenic 30.0%
ACAAACAGCTAGATATTAGT+TGG + chr7_1:52214694-52214713 None:intergenic 30.0%
GAAAAAAGAAACTCATGGAA+GGG - chr7_1:52214763-52214782 Msa1023920:intron 30.0%
! ATAAATTGAATGAGTTGGAC+AGG + chr7_1:52214836-52214855 None:intergenic 30.0%
! CAATGTATGTTTGGAATATC+AGG - chr7_1:52214879-52214898 Msa1023920:intron 30.0%
! ATCTGAGATTATTGTATCAG+TGG - chr7_1:52214906-52214925 Msa1023920:intron 30.0%
! TCTGAGATTATTGTATCAGT+GGG - chr7_1:52214907-52214926 Msa1023920:intron 30.0%
AAGTTATAGTATTTAGGCAG+GGG + chr7_1:52215093-52215112 None:intergenic 30.0%
GAAGTTATAGTATTTAGGCA+GGG + chr7_1:52215094-52215113 None:intergenic 30.0%
TGAAGTTATAGTATTTAGGC+AGG + chr7_1:52215095-52215114 None:intergenic 30.0%
ACTATAACTTCAACCAACAA+TGG - chr7_1:52215103-52215122 Msa1023920:intron 30.0%
CTATAACTTCAACCAACAAT+GGG - chr7_1:52215104-52215123 Msa1023920:intron 30.0%
! GAAAATCTAAAATCTGCAGA+AGG - chr7_1:52215449-52215468 Msa1023920:intron 30.0%
ATCTTTCCAGAATAAAGCAT+GGG + chr7_1:52215482-52215501 None:intergenic 30.0%
!! CTTGTAAGTATTGAAGTCAT+TGG + chr7_1:52215576-52215595 None:intergenic 30.0%
TGACTTCAATACTTACAAGA+AGG - chr7_1:52215577-52215596 Msa1023920:intron 30.0%
!! AAAATCAAAGGAGTTGGTAA+AGG + chr7_1:52215604-52215623 None:intergenic 30.0%
TATGTTGAAAGCTAGATCAA+AGG - chr7_1:52215870-52215889 Msa1023920:intron 30.0%
ATGTTGAAAGCTAGATCAAA+GGG - chr7_1:52215871-52215890 Msa1023920:intron 30.0%
TACAAATGAACATCATCCAA+CGG - chr7_1:52215908-52215927 Msa1023920:five_prime_UTR 30.0%
ATCTAGATAACCACAAGAAA+TGG + chr7_1:52216006-52216025 None:intergenic 30.0%
GGTTATCTAGATGAATAGTT+AGG - chr7_1:52216014-52216033 Msa1023920:intron 30.0%
CTAGATGAATAGTTAGGTTT+AGG - chr7_1:52216020-52216039 Msa1023920:intron 30.0%
AGTGGTTACAAATTGTTGAA+AGG - chr7_1:52216083-52216102 Msa1023920:five_prime_UTR 30.0%
GTGGTTACAAATTGTTGAAA+GGG - chr7_1:52216084-52216103 Msa1023920:five_prime_UTR 30.0%
! GAGAGAGAAGTGTAACTATA+AGG + chr7_1:52206029-52206048 None:intergenic 35.0%
CTAGTACAATTCTAGTAGGT+AGG - chr7_1:52206133-52206152 Msa1023920:three_prime_UTR 35.0%
! TATGTGATTTTGTTGGGTGA+AGG - chr7_1:52206467-52206486 Msa1023920:CDS 35.0%
! ATGTGATTTTGTTGGGTGAA+GGG - chr7_1:52206468-52206487 Msa1023920:CDS 35.0%
!! TTTGGTACATAGGGTTTTGT+TGG - chr7_1:52206589-52206608 Msa1023920:intron 35.0%
!!! TTGGTACATAGGGTTTTGTT+GGG - chr7_1:52206590-52206609 Msa1023920:intron 35.0%
! TAATTTTCCTTACAGGGTAC+CGG + chr7_1:52206618-52206637 None:intergenic 35.0%
ATAACCACACCTACATAAGA+CGG + chr7_1:52206778-52206797 None:intergenic 35.0%
! GAAGATGAAGATCCTTTTGA+GGG - chr7_1:52206883-52206902 Msa1023920:intron 35.0%
AGAGTATAATGCGCCAAAAA+AGG - chr7_1:52206915-52206934 Msa1023920:intron 35.0%
!! GTGATTTAAGTTGGATACCT+TGG - chr7_1:52207161-52207180 Msa1023920:intron 35.0%
! GCTTTTAGTGTTGTCAATTG+TGG - chr7_1:52207213-52207232 Msa1023920:intron 35.0%
! GCTATAGTGCTATTGCATAA+CGG + chr7_1:52207349-52207368 None:intergenic 35.0%
! GTCATACAATTTGGGACAAA+GGG + chr7_1:52207411-52207430 None:intergenic 35.0%
! TCCCAAATTGTATGACGTTT+TGG - chr7_1:52207415-52207434 Msa1023920:CDS 35.0%
CCCAAAACGTCATACAATTT+GGG + chr7_1:52207419-52207438 None:intergenic 35.0%
! CCCAAATTGTATGACGTTTT+GGG - chr7_1:52207416-52207435 Msa1023920:CDS 35.0%
GATATGGGACAGATAAATGA+AGG - chr7_1:52207524-52207543 Msa1023920:intron 35.0%
!! TGACTGTATTTTGTTGTGCA+AGG - chr7_1:52207754-52207773 Msa1023920:intron 35.0%
!!! CTAAACTCCTGCTTTGTTTT+AGG - chr7_1:52207828-52207847 Msa1023920:intron 35.0%
ACACAAAATGCTTGCAACTT+TGG + chr7_1:52208262-52208281 None:intergenic 35.0%
! GCAAGCATTTTGTGTTCTTT+TGG - chr7_1:52208267-52208286 Msa1023920:intron 35.0%
!! TTATTTACATGCAGGTTGGT+TGG - chr7_1:52208495-52208514 Msa1023920:intron 35.0%
!! ATACCTTCTAAGGTTCCATT+GGG - chr7_1:52208553-52208572 Msa1023920:intron 35.0%
AGGTAAAATATCGTCAGTGA+AGG + chr7_1:52208584-52208603 None:intergenic 35.0%
! TTCACTGACGATATTTTACC+TGG - chr7_1:52208583-52208602 Msa1023920:intron 35.0%
!! AAGCATGTTAAGGTTTGTTG+TGG - chr7_1:52208959-52208978 Msa1023920:intron 35.0%
AAAGGAGCCCACTTATATAA+AGG + chr7_1:52209028-52209047 None:intergenic 35.0%
GTTCTTACATTTGAGCATCA+TGG - chr7_1:52209053-52209072 Msa1023920:intron 35.0%
ATATCACAAATCCCTATGAC+TGG + chr7_1:52209286-52209305 None:intergenic 35.0%
ACTATGAAGTCAAGATAGCA+GGG + chr7_1:52209350-52209369 None:intergenic 35.0%
ACATTGTGCGCATTAGATAA+TGG + chr7_1:52209641-52209660 None:intergenic 35.0%
AATGTCAATGTCTGTTACTC+AGG - chr7_1:52209656-52209675 Msa1023920:CDS 35.0%
! TGTGTGTTTTCCTTCTTTAC+AGG - chr7_1:52209744-52209763 Msa1023920:intron 35.0%
TACTCAGGTTTATAGATTCC+TGG + chr7_1:52209799-52209818 None:intergenic 35.0%
ACCATTGAGATCAACAAGTT+CGG + chr7_1:52209905-52209924 None:intergenic 35.0%
TCATCATCGTCATCATTATC+TGG + chr7_1:52209937-52209956 None:intergenic 35.0%
! AATGATGACGATGATGATGA+TGG - chr7_1:52209940-52209959 Msa1023920:intron 35.0%
! TAACACATGGTTTGGGTTTA+GGG - chr7_1:52210110-52210129 Msa1023920:intron 35.0%
! CTAAAAACTTTCTTTGGGAG+AGG - chr7_1:52210191-52210210 Msa1023920:intron 35.0%
CTGTATGATGTACGTAACAA+TGG + chr7_1:52210225-52210244 None:intergenic 35.0%
!! TCCTTTGGAATAATATGGTC+TGG - chr7_1:52210298-52210317 Msa1023920:intron 35.0%
TCCAGACCATATTATTCCAA+AGG + chr7_1:52210302-52210321 None:intergenic 35.0%
!! AATAACGGGCCAAAATTTGT+TGG - chr7_1:52210393-52210412 Msa1023920:intron 35.0%
CTACCTCTATAGATATGCTA+TGG - chr7_1:52210477-52210496 Msa1023920:intron 35.0%
TATAGATATGCTATGGGACA+TGG - chr7_1:52210484-52210503 Msa1023920:intron 35.0%
TTCTGTTAGTGTTAAGCTGT+CGG + chr7_1:52210780-52210799 None:intergenic 35.0%
TTACATAGTCTCTACTGTAC+CGG + chr7_1:52210815-52210834 None:intergenic 35.0%
CATGGTTCTCCTAAGAAAAT+AGG + chr7_1:52210921-52210940 None:intergenic 35.0%
AATGCATCTTGCTGATCATT+AGG + chr7_1:52210991-52211010 None:intergenic 35.0%
ATGATCAGCAAGATGCATTT+CGG - chr7_1:52210992-52211011 Msa1023920:intron 35.0%
CTGCTTTCAGATACTCAAAT+TGG - chr7_1:52211020-52211039 Msa1023920:intron 35.0%
GCTTTCAGATACTCAAATTG+GGG - chr7_1:52211022-52211041 Msa1023920:intron 35.0%
CTTTCAGATACTCAAATTGG+GGG - chr7_1:52211023-52211042 Msa1023920:intron 35.0%
! GATCTTTTTGTGATGACAAG+TGG - chr7_1:52211097-52211116 Msa1023920:intron 35.0%
! GCTTCACTACTTGTTTGTTA+AGG - chr7_1:52211159-52211178 Msa1023920:intron 35.0%
TTCATAAGCTCAAACCAAAC+GGG - chr7_1:52211343-52211362 Msa1023920:intron 35.0%
AACCATGAATCGCAAAATTC+TGG + chr7_1:52211559-52211578 None:intergenic 35.0%
! ATGGTTGCTTTACCTTTACT+GGG - chr7_1:52211573-52211592 Msa1023920:intron 35.0%
ATTTCGCAATATGGTTACAG+AGG + chr7_1:52211601-52211620 None:intergenic 35.0%
TGTTAATGGCTCAGATAAGT+TGG + chr7_1:52212029-52212048 None:intergenic 35.0%
TACAAAGTAACTGCAGTCTT+AGG + chr7_1:52212090-52212109 None:intergenic 35.0%
AGCTAGGGATAATGTATTTC+TGG + chr7_1:52212245-52212264 None:intergenic 35.0%
!!! AATTTTGTTGCTTTGCAAGC+AGG - chr7_1:52212514-52212533 Msa1023920:intron 35.0%
!!! ATTTTGTTGCTTTGCAAGCA+GGG - chr7_1:52212515-52212534 Msa1023920:intron 35.0%
ACCACTTCACATTACTTGAT+GGG - chr7_1:52212823-52212842 Msa1023920:intron 35.0%
AGTGCCAAATTCAAAAAAGC+AGG - chr7_1:52212863-52212882 Msa1023920:intron 35.0%
!!! CTTGCCTGCTTTTTTGAATT+TGG + chr7_1:52212870-52212889 None:intergenic 35.0%
CAAATTCAAAAAAGCAGGCA+AGG - chr7_1:52212868-52212887 Msa1023920:intron 35.0%
CCTAATATATGATCTGATGG+CGG - chr7_1:52212896-52212915 Msa1023920:intron 35.0%
TTGTTCATAATCATGCCCTT+AGG - chr7_1:52213005-52213024 Msa1023920:intron 35.0%
GTATGCTGTCTAGAAAAACA+GGG + chr7_1:52213123-52213142 None:intergenic 35.0%
AAGGTCATAAAAGAAACAGC+TGG + chr7_1:52213145-52213164 None:intergenic 35.0%
GGATTTAGTCCTTTAGTTGA+GGG - chr7_1:52213397-52213416 Msa1023920:intron 35.0%
TGGTTAATCTGGTACAAACT+TGG - chr7_1:52213744-52213763 Msa1023920:intron 35.0%
TATAGTAAGGATGTTTGCGA+TGG + chr7_1:52213843-52213862 None:intergenic 35.0%
!!! CTTGAGCTTTATTTTTCACC+TGG - chr7_1:52213919-52213938 Msa1023920:intron 35.0%
CATCCTATTTAGCATGAGAA+TGG - chr7_1:52214267-52214286 Msa1023920:CDS 35.0%
GTAAGGAGGACATAAATGAA+TGG + chr7_1:52214418-52214437 None:intergenic 35.0%
GTAACATGAGGGAAAGAAAA+AGG + chr7_1:52214453-52214472 None:intergenic 35.0%
CATTCACTTCAGTAACATGA+GGG + chr7_1:52214464-52214483 None:intergenic 35.0%
TAGATATTAGTTGGATGCAC+CGG + chr7_1:52214685-52214704 None:intergenic 35.0%
!!! CTACTTTTTCTCTATGAACG+TGG - chr7_1:52214741-52214760 Msa1023920:intron 35.0%
ACGTGGAAAAAAGAAACTCA+TGG - chr7_1:52214758-52214777 Msa1023920:intron 35.0%
GGAAAAAAGAAACTCATGGA+AGG - chr7_1:52214762-52214781 Msa1023920:intron 35.0%
GGGTTTATTGTTGCATTTGA+AGG - chr7_1:52214783-52214802 Msa1023920:intron 35.0%
TATTGTTGCATTTGAAGGTC+AGG - chr7_1:52214788-52214807 Msa1023920:intron 35.0%
AATATTACTAGCCCAAGTAC+AGG + chr7_1:52214933-52214952 None:intergenic 35.0%
! AAAATGAAGCATCCCATTGT+TGG + chr7_1:52215119-52215138 None:intergenic 35.0%
! ATTTGTTTCTCAGTACCTAC+AGG - chr7_1:52215211-52215230 Msa1023920:intron 35.0%
AAATAAGCATGTGAACCTGT+AGG + chr7_1:52215229-52215248 None:intergenic 35.0%
TACAGGTTCACATGCTTATT+TGG - chr7_1:52215228-52215247 Msa1023920:CDS 35.0%
AATTTCCATACCCAACTTTC+TGG + chr7_1:52215303-52215322 None:intergenic 35.0%
AGAAAGTTGGGTATGGAAAT+TGG - chr7_1:52215302-52215321 Msa1023920:CDS 35.0%
TCTTTCCAGAATAAAGCATG+GGG + chr7_1:52215481-52215500 None:intergenic 35.0%
GATCTTTCCAGAATAAAGCA+TGG + chr7_1:52215483-52215502 None:intergenic 35.0%
CTATTTGCTCAATATGTTGC+AGG - chr7_1:52215663-52215682 Msa1023920:intron 35.0%
CATAAAAGACAATATCACCG+AGG - chr7_1:52215696-52215715 Msa1023920:intron 35.0%
TCTCGTTTATTTCAGTCAAC+AGG + chr7_1:52215726-52215745 None:intergenic 35.0%
AGGATAAGAATCGATAGCAA+AGG - chr7_1:52215772-52215791 Msa1023920:intron 35.0%
TACATGATATGATGAACCGT+TGG + chr7_1:52215927-52215946 None:intergenic 35.0%
TAACCACAAGAAATGGTTTC+AGG + chr7_1:52215999-52216018 None:intergenic 35.0%
AGAGAGAAACAGTGACAGTT+AGG + chr7_1:52206057-52206076 None:intergenic 40.0%
TGTTTCTCTCTCTCTCTCTA+GGG - chr7_1:52206066-52206085 Msa1023920:three_prime_UTR 40.0%
! AGAGGAATTTGAAGTTTGCG+TGG - chr7_1:52206285-52206304 Msa1023920:three_prime_UTR 40.0%
! TTTGAAGTTTGCGTGGTTTG+AGG - chr7_1:52206292-52206311 Msa1023920:three_prime_UTR 40.0%
AGTTGTTGGGATGATTTACG+AGG - chr7_1:52206430-52206449 Msa1023920:CDS 40.0%
GTTGTTGGGATGATTTACGA+GGG - chr7_1:52206431-52206450 Msa1023920:CDS 40.0%
TGTTGGGTGAAGGGTAAATT+TGG - chr7_1:52206477-52206496 Msa1023920:CDS 40.0%
GTTGGGTGAAGGGTAAATTT+GGG - chr7_1:52206478-52206497 Msa1023920:CDS 40.0%
GTGCATGCTGGCATAATAAT+AGG - chr7_1:52206711-52206730 Msa1023920:CDS 40.0%
AAAGGATCTTCATCTTCCTC+CGG + chr7_1:52206880-52206899 None:intergenic 40.0%
! GGAAGATGAAGATCCTTTTG+AGG - chr7_1:52206882-52206901 Msa1023920:intron 40.0%
!! AATAGAGAAGAAAGGGTACC+CGG + chr7_1:52207002-52207021 None:intergenic 40.0%
AAATCCTTATCCCACTAAGC+CGG + chr7_1:52207108-52207127 None:intergenic 40.0%
ACTACAATCACAGTGTTCCA+AGG + chr7_1:52207181-52207200 None:intergenic 40.0%
GTGTTGTCAATTGTGGATTC+CGG - chr7_1:52207220-52207239 Msa1023920:intron 40.0%
! CGTCATACAATTTGGGACAA+AGG + chr7_1:52207412-52207431 None:intergenic 40.0%
GCCCAAAACGTCATACAATT+TGG + chr7_1:52207420-52207439 None:intergenic 40.0%
TCACGTTCCTAAAACAAAGC+AGG + chr7_1:52207838-52207857 None:intergenic 40.0%
GTATCATGCCGAAAATTTCC+TGG + chr7_1:52208537-52208556 None:intergenic 40.0%
TTTCGGCATGATACCTTCTA+AGG - chr7_1:52208543-52208562 Msa1023920:intron 40.0%
!! GATACCTTCTAAGGTTCCAT+TGG - chr7_1:52208552-52208571 Msa1023920:intron 40.0%
! CACAATCTATTTTGCACCCT+TGG - chr7_1:52208815-52208834 Msa1023920:intron 40.0%
AGTCAAATGAACCAAGCCAA+GGG + chr7_1:52208834-52208853 None:intergenic 40.0%
!! AGAGGGTATCAAGCATGTTA+AGG - chr7_1:52208949-52208968 Msa1023920:intron 40.0%
AAAACATATGGTTGGGGAGA+AGG + chr7_1:52208989-52209008 None:intergenic 40.0%
ACATTTGAGCATCATGGTTG+TGG - chr7_1:52209059-52209078 Msa1023920:intron 40.0%
TGTGGTTTAGATCCAATGCA+AGG - chr7_1:52209077-52209096 Msa1023920:intron 40.0%
GTGGTTTAGATCCAATGCAA+GGG - chr7_1:52209078-52209097 Msa1023920:intron 40.0%
TGTCAATCACTTTGTGTACG+AGG - chr7_1:52209128-52209147 Msa1023920:intron 40.0%
AATCACTTTGTGTACGAGGT+TGG - chr7_1:52209132-52209151 Msa1023920:intron 40.0%
AGAAACATGCTCCAGTCATA+GGG - chr7_1:52209272-52209291 Msa1023920:intron 40.0%
CACTATGAAGTCAAGATAGC+AGG + chr7_1:52209351-52209370 None:intergenic 40.0%
CTGCTATCTTGACTTCATAG+TGG - chr7_1:52209349-52209368 Msa1023920:CDS 40.0%
! TGCGAATGCGATGTGATTTT+TGG - chr7_1:52209472-52209491 Msa1023920:intron 40.0%
TCAGGTTTATAGATTCCTGG+AGG + chr7_1:52209796-52209815 None:intergenic 40.0%
CCATTGAGATCAACAAGTTC+GGG + chr7_1:52209904-52209923 None:intergenic 40.0%
GAAATTCATACTTGCAACGG+AGG + chr7_1:52209976-52209995 None:intergenic 40.0%
! CTAACACATGGTTTGGGTTT+AGG - chr7_1:52210109-52210128 Msa1023920:intron 40.0%
! AACACATGGTTTGGGTTTAG+GGG - chr7_1:52210111-52210130 Msa1023920:intron 40.0%
! AAAACTTTCTTTGGGAGAGG+TGG - chr7_1:52210194-52210213 Msa1023920:CDS 40.0%
! AAACTTTCTTTGGGAGAGGT+GGG - chr7_1:52210195-52210214 Msa1023920:CDS 40.0%
CAGCTTGAGTTCAAAAACAG+TGG - chr7_1:52210242-52210261 Msa1023920:intron 40.0%
!! ATTGTTTCTACCTTGTAGGG+TGG - chr7_1:52210269-52210288 Msa1023920:intron 40.0%
TGGATGTATGTGCGTAACAA+TGG - chr7_1:52210318-52210337 Msa1023920:intron 40.0%
! AGCACACTGCCAACAAATTT+TGG + chr7_1:52210405-52210424 None:intergenic 40.0%
GTCCCATAGCATATCTATAG+AGG + chr7_1:52210483-52210502 None:intergenic 40.0%
CTAGGTTCAAGAATGTGCTA+AGG + chr7_1:52210577-52210596 None:intergenic 40.0%
CTGTCATAGGTAGATGTAGT+TGG + chr7_1:52210750-52210769 None:intergenic 40.0%
GGTACAGTAGAGACTATGTA+AGG - chr7_1:52210814-52210833 Msa1023920:intron 40.0%
TATGCAATTTAGGTCCCGTT+TGG + chr7_1:52211360-52211379 None:intergenic 40.0%
TACAATTGTGCGCTTAGACA+TGG - chr7_1:52211452-52211471 Msa1023920:intron 40.0%
! AGCCAGAATTTTGCGATTCA+TGG - chr7_1:52211554-52211573 Msa1023920:intron 40.0%
! CATGGTTGCTTTACCTTTAC+TGG - chr7_1:52211572-52211591 Msa1023920:intron 40.0%
CAAAAATCAGTGCTTCTCCT+AGG - chr7_1:52211730-52211749 Msa1023920:intron 40.0%
ATAAGGTAAAGGGGGAGAAT+CGG + chr7_1:52211912-52211931 None:intergenic 40.0%
TGGACCTGTCTAAAGAAACT+GGG + chr7_1:52212009-52212028 None:intergenic 40.0%
TTGGACCTGTCTAAAGAAAC+TGG + chr7_1:52212010-52212029 None:intergenic 40.0%
AGAAGATGGAATGCTAGCTA+GGG + chr7_1:52212260-52212279 None:intergenic 40.0%
! TCATTCTGAAGGAGAGAAGA+TGG + chr7_1:52212274-52212293 None:intergenic 40.0%
CTTCTCTCCTTCAGAATGAA+TGG - chr7_1:52212275-52212294 Msa1023920:CDS 40.0%
ATGTTGCATAGTAGTAACGC+TGG + chr7_1:52212560-52212579 None:intergenic 40.0%
AGCGTTACTACTATGCAACA+TGG - chr7_1:52212559-52212578 Msa1023920:CDS 40.0%
TATGCAACATGGAAAGCTGA+TGG - chr7_1:52212570-52212589 Msa1023920:CDS 40.0%
TTCAAATGAGGTTTCCATGC+AGG - chr7_1:52212664-52212683 Msa1023920:intron 40.0%
TCAAATGAGGTTTCCATGCA+GGG - chr7_1:52212665-52212684 Msa1023920:intron 40.0%
GGTTGCAAATGATGTATGTG+TGG - chr7_1:52212686-52212705 Msa1023920:intron 40.0%
AGTGGAAGCTTCTGAATATG+TGG - chr7_1:52212746-52212765 Msa1023920:intron 40.0%
!!! TATTTTGGCTTTCAAGGGCT+TGG - chr7_1:52212788-52212807 Msa1023920:intron 40.0%
CACCACTTCACATTACTTGA+TGG - chr7_1:52212822-52212841 Msa1023920:intron 40.0%
CCACTTCACATTACTTGATG+GGG - chr7_1:52212824-52212843 Msa1023920:intron 40.0%
CCGCCATCAGATCATATATT+AGG + chr7_1:52212899-52212918 None:intergenic 40.0%
GGTATGCTGTCTAGAAAAAC+AGG + chr7_1:52213124-52213143 None:intergenic 40.0%
! GCTAAGTTGACAGGAACTTT+GGG + chr7_1:52213331-52213350 None:intergenic 40.0%
! AGCTAAGTTGACAGGAACTT+TGG + chr7_1:52213332-52213351 None:intergenic 40.0%
! ACACAATCAGCTAAGTTGAC+AGG + chr7_1:52213340-52213359 None:intergenic 40.0%
AGCTGATTGTGTGAACTTGT+TGG - chr7_1:52213348-52213367 Msa1023920:intron 40.0%
GGGATTTAGTCCTTTAGTTG+AGG - chr7_1:52213396-52213415 Msa1023920:intron 40.0%
TTCACACATTAAAGTGGGAG+AGG - chr7_1:52213471-52213490 Msa1023920:intron 40.0%
TCACACATTAAAGTGGGAGA+GGG - chr7_1:52213472-52213491 Msa1023920:intron 40.0%
ATCTCTATCTTTCTCCACAC+TGG + chr7_1:52213502-52213521 None:intergenic 40.0%
AGAAAGAAGTGATTGAACCC+AGG - chr7_1:52213803-52213822 Msa1023920:intron 40.0%
TTGAACCCAGGAATCATGAA+CGG - chr7_1:52213815-52213834 Msa1023920:intron 40.0%
TATATGACATGGAGCCTTTC+AGG - chr7_1:52213863-52213882 Msa1023920:intron 40.0%
ATATGACATGGAGCCTTTCA+GGG - chr7_1:52213864-52213883 Msa1023920:intron 40.0%
TCAGAAATGCATACCCTGAA+AGG + chr7_1:52213880-52213899 None:intergenic 40.0%
CAAGCTGTATGCTCAATTTC+AGG + chr7_1:52213903-52213922 None:intergenic 40.0%
! TCTGAAATGATTAGGTGAGG+AGG - chr7_1:52213962-52213981 Msa1023920:intron 40.0%
! AGGTGAGGAGGAAAGATTTT+TGG - chr7_1:52213974-52213993 Msa1023920:intron 40.0%
AGATGGTCTCATATTTCAGG+TGG - chr7_1:52214056-52214075 Msa1023920:intron 40.0%
! GATGGTCTCATATTTCAGGT+GGG - chr7_1:52214057-52214076 Msa1023920:intron 40.0%
! ATATTGGTTACTAGCCAGCT+TGG + chr7_1:52214169-52214188 None:intergenic 40.0%
TGAGGTGATAGAGAACCAAT+GGG + chr7_1:52214230-52214249 None:intergenic 40.0%
TTGAGGTGATAGAGAACCAA+TGG + chr7_1:52214231-52214250 None:intergenic 40.0%
! ATTGGTTCTCTATCACCTCA+AGG - chr7_1:52214230-52214249 Msa1023920:CDS 40.0%
GTATATAGCCTAGCGTATAG+AGG - chr7_1:52214350-52214369 Msa1023920:intron 40.0%
ACATTGATCCTCTATACGCT+AGG + chr7_1:52214361-52214380 None:intergenic 40.0%
AGCTTAGAGTCTGGATACAT+TGG - chr7_1:52214391-52214410 Msa1023920:intron 40.0%
GGAAATACTATGTGGTAAGG+AGG + chr7_1:52214432-52214451 None:intergenic 40.0%
CCATTCACTTCAGTAACATG+AGG + chr7_1:52214465-52214484 None:intergenic 40.0%
CCTCATGTTACTGAAGTGAA+TGG - chr7_1:52214462-52214481 Msa1023920:intron 40.0%
CATGTTACTGAAGTGAATGG+AGG - chr7_1:52214465-52214484 Msa1023920:intron 40.0%
ACAATGTTTACGATCAGGGA+TGG - chr7_1:52214497-52214516 Msa1023920:intron 40.0%
CAATGTTTACGATCAGGGAT+GGG - chr7_1:52214498-52214517 Msa1023920:intron 40.0%
TCATGAGTACGAGGTACATA+AGG + chr7_1:52214529-52214548 None:intergenic 40.0%
TATGTACCTCGTACTCATGA+AGG - chr7_1:52214529-52214548 Msa1023920:intron 40.0%
CTCATGAAGGTCTCTTAAAG+TGG - chr7_1:52214542-52214561 Msa1023920:intron 40.0%
!! AGTCACTTCTAGTTTGTTGC+CGG - chr7_1:52214663-52214682 Msa1023920:intron 40.0%
TATTATGTCTAGTCAGGTCG+TGG - chr7_1:52215184-52215203 Msa1023920:intron 40.0%
TGCTTATTTGGTCTCGAGAT+TGG - chr7_1:52215240-52215259 Msa1023920:CDS 40.0%
AAAGATCATCGAGTGTGCTT+GGG - chr7_1:52215496-52215515 Msa1023920:intron 40.0%
!! GCTATCGATTCTTATCCTGT+CGG + chr7_1:52215770-52215789 None:intergenic 40.0%
AGTAATCAGTGAGGAACTCA+TGG - chr7_1:52215815-52215834 Msa1023920:intron 40.0%
ATGGTCTGTAAAGCTTTCAC+TGG - chr7_1:52215834-52215853 Msa1023920:intron 40.0%
TCTGTAAAGCTTTCACTGGT+GGG - chr7_1:52215838-52215857 Msa1023920:intron 40.0%
AGATCAAAGGGATCTACTGA+TGG - chr7_1:52215883-52215902 Msa1023920:intron 40.0%
TTCTGCATTTACCTCCTTAG+TGG - chr7_1:52216219-52216238 Msa1023920:five_prime_UTR 40.0%
TCCTTAGTGGAAGCTATGTT+GGG - chr7_1:52216232-52216251 Msa1023920:five_prime_UTR 40.0%
! CTGTTTCTCTCTCTCTCTCT+AGG - chr7_1:52206065-52206084 Msa1023920:three_prime_UTR 45.0%
!!! TCTCTCTCTCTCTAGGGTTT+TGG - chr7_1:52206072-52206091 Msa1023920:three_prime_UTR 45.0%
! AAGTTTGCGTGGTTTGAGGT+AGG - chr7_1:52206296-52206315 Msa1023920:three_prime_UTR 45.0%
!!! CATAGGGTTTTGTTGGGTAC+CGG - chr7_1:52206596-52206615 Msa1023920:intron 45.0%
ATTGGATGATGAGTGCATGC+TGG - chr7_1:52206699-52206718 Msa1023920:CDS 45.0%
GATACCGTCTTATGTAGGTG+TGG - chr7_1:52206771-52206790 Msa1023920:intron 45.0%
TAATGCGCCAAAAAAGGACC+AGG - chr7_1:52206921-52206940 Msa1023920:intron 45.0%
!!! TCTTCGACCTGGTCCTTTTT+TGG + chr7_1:52206931-52206950 None:intergenic 45.0%
CCACTTTCTATGTGCTCTTC+TGG + chr7_1:52206964-52206983 None:intergenic 45.0%
! CCAGAAGAGCACATAGAAAG+TGG - chr7_1:52206961-52206980 Msa1023920:intron 45.0%
TTTGATTCATGTAGCCGACC+CGG - chr7_1:52207086-52207105 Msa1023920:intron 45.0%
AATCCTTATCCCACTAAGCC+GGG + chr7_1:52207107-52207126 None:intergenic 45.0%
TTGTGGATTCCGGAAAACAG+CGG - chr7_1:52207230-52207249 Msa1023920:intron 45.0%
!! TTGAACCAACCGCTGTTTTC+CGG + chr7_1:52207242-52207261 None:intergenic 45.0%
! TGACATACAATTTGGGACGG+AGG - chr7_1:52207661-52207680 Msa1023920:CDS 45.0%
! GACATACAATTTGGGACGGA+GGG - chr7_1:52207662-52207681 Msa1023920:CDS 45.0%
TGATGGAAGTAAGCTTCCTC+CGG - chr7_1:52207966-52207985 Msa1023920:intron 45.0%
ATCACCAATTACCACCAGCA+AGG + chr7_1:52208022-52208041 None:intergenic 45.0%
AAATTTCCTGGCCAGACGAA+GGG + chr7_1:52208525-52208544 None:intergenic 45.0%
AAAATTTCCTGGCCAGACGA+AGG + chr7_1:52208526-52208545 None:intergenic 45.0%
! TCGTCTGGCCAGGAAATTTT+CGG - chr7_1:52208526-52208545 Msa1023920:intron 45.0%
TCACCCAATGGAACCTTAGA+AGG + chr7_1:52208559-52208578 None:intergenic 45.0%
TCAGTGAAGGATTCACCCAA+TGG + chr7_1:52208571-52208590 None:intergenic 45.0%
GTACGGTGGTGATCAATGAA+AGG - chr7_1:52208703-52208722 Msa1023920:intron 45.0%
! TCTATTTTGCACCCTTGGCT+TGG - chr7_1:52208820-52208839 Msa1023920:intron 45.0%
CAGTCAAATGAACCAAGCCA+AGG + chr7_1:52208835-52208854 None:intergenic 45.0%
!! AATTATCAGGTACTGAGCCG+CGG + chr7_1:52209104-52209123 None:intergenic 45.0%
CAGAAACATGCTCCAGTCAT+AGG - chr7_1:52209271-52209290 Msa1023920:intron 45.0%
ACACATGGTCACAATCGTAC+AGG - chr7_1:52209603-52209622 Msa1023920:CDS 45.0%
TCTGTTACTCAGGTCAGCAT+TGG - chr7_1:52209666-52209685 Msa1023920:intron 45.0%
!! CCCGAACTTGTTGATCTCAA+TGG - chr7_1:52209901-52209920 Msa1023920:intron 45.0%
!! GATGATGATGATGGAGTACC+AGG - chr7_1:52209949-52209968 Msa1023920:intron 45.0%
! ACACATGGTTTGGGTTTAGG+GGG - chr7_1:52210112-52210131 Msa1023920:intron 45.0%
! AACTTTCTTTGGGAGAGGTG+GGG - chr7_1:52210196-52210215 Msa1023920:CDS 45.0%
AGGAAAATTGCCACCCTACA+AGG + chr7_1:52210282-52210301 None:intergenic 45.0%
! GTAGGGTGGCAATTTTCCTT+TGG - chr7_1:52210283-52210302 Msa1023920:intron 45.0%
TACAATCTGCTCAAGCCGAA+GGG + chr7_1:52210349-52210368 None:intergenic 45.0%
ATACAATCTGCTCAAGCCGA+AGG + chr7_1:52210350-52210369 None:intergenic 45.0%
CTACATCTACCTATGACAGC+TGG - chr7_1:52210751-52210770 Msa1023920:intron 45.0%
TGTTAGTGTTAAGCTGTCGG+TGG + chr7_1:52210777-52210796 None:intergenic 45.0%
AGATACTCAAATTGGGGGCT+GGG - chr7_1:52211028-52211047 Msa1023920:intron 45.0%
! TTGTTTGTTAAGGGCCCGTT+TGG - chr7_1:52211169-52211188 Msa1023920:CDS 45.0%
GGATGTATTCTGCAGGTTGT+TGG - chr7_1:52211400-52211419 Msa1023920:intron 45.0%
TGGAAATTGCATGTGTCCTC+TGG + chr7_1:52211978-52211997 None:intergenic 45.0%
AGAGGACACATGCAATTTCC+AGG - chr7_1:52211977-52211996 Msa1023920:intron 45.0%
GAGGACACATGCAATTTCCA+GGG - chr7_1:52211978-52211997 Msa1023920:intron 45.0%
CACACCCAGTTTCTTTAGAC+AGG - chr7_1:52212002-52212021 Msa1023920:intron 45.0%
GAGAAGATGGAATGCTAGCT+AGG + chr7_1:52212261-52212280 None:intergenic 45.0%
ACATCATTTGCAACCCTGCA+TGG + chr7_1:52212681-52212700 None:intergenic 45.0%
CCCCATCAAGTAATGTGAAG+TGG + chr7_1:52212827-52212846 None:intergenic 45.0%
TTAGTCCTTTAGTTGAGGGC+TGG - chr7_1:52213401-52213420 Msa1023920:intron 45.0%
GCATCAGATACGAATACACG+AGG - chr7_1:52213427-52213446 Msa1023920:intron 45.0%
! CAGAAGCGCAATACATAGAG+AGG + chr7_1:52213542-52213561 None:intergenic 45.0%
CTCTCTATGTATTGCGCTTC+TGG - chr7_1:52213540-52213559 Msa1023920:intron 45.0%
AACTAAAGCACACCACAGCA+TGG + chr7_1:52213586-52213605 None:intergenic 45.0%
TGGTACCGTTCATGATTCCT+GGG + chr7_1:52213823-52213842 None:intergenic 45.0%
ATGGTACCGTTCATGATTCC+TGG + chr7_1:52213824-52213843 None:intergenic 45.0%
CGCAGATGGTCTCATATTTC+AGG - chr7_1:52214053-52214072 Msa1023920:intron 45.0%
!! ACCTGTGAGTAACTTGCTTC+TGG - chr7_1:52214136-52214155 Msa1023920:intron 45.0%
ACCAGAAGCAAGTTACTCAC+AGG + chr7_1:52214140-52214159 None:intergenic 45.0%
AGGTGATAGAGAACCAATGG+GGG + chr7_1:52214228-52214247 None:intergenic 45.0%
GAGGTGATAGAGAACCAATG+GGG + chr7_1:52214229-52214248 None:intergenic 45.0%
CGATGTCTCTTTAACTGGAC+TGG + chr7_1:52214331-52214350 None:intergenic 45.0%
!! ACCTAGACTAGCTTAGAGTC+TGG - chr7_1:52214382-52214401 Msa1023920:intron 45.0%
! TCCAGACTCTAAGCTAGTCT+AGG + chr7_1:52214386-52214405 None:intergenic 45.0%
AAGAGACCTTCATGAGTACG+AGG + chr7_1:52214538-52214557 None:intergenic 45.0%
AGTATTTAGGCAGGGGAAAG+AGG + chr7_1:52215086-52215105 None:intergenic 45.0%
! TTCTGGTGGGTGCTAGAAAT+TGG + chr7_1:52215286-52215305 None:intergenic 45.0%
! TCCATACCCAACTTTCTGGT+GGG + chr7_1:52215299-52215318 None:intergenic 45.0%
TTCCATACCCAACTTTCTGG+TGG + chr7_1:52215300-52215319 None:intergenic 45.0%
! TCAGACCCCATGCTTTATTC+TGG - chr7_1:52215473-52215492 Msa1023920:intron 45.0%
GAAAGATCATCGAGTGTGCT+TGG - chr7_1:52215495-52215514 Msa1023920:intron 45.0%
GGGATGGTGATAGAAACGAA+TGG - chr7_1:52215516-52215535 Msa1023920:intron 45.0%
TTCAGTCAACAGGACATCCT+CGG + chr7_1:52215716-52215735 None:intergenic 45.0%
CTTATCCTGTCGGCATACAT+GGG + chr7_1:52215760-52215779 None:intergenic 45.0%
TCTTATCCTGTCGGCATACA+TGG + chr7_1:52215761-52215780 None:intergenic 45.0%
GCAAAGGACATCATGTAGCT+AGG - chr7_1:52215788-52215807 Msa1023920:intron 45.0%
CTAGGCGAAAGTAATCAGTG+AGG - chr7_1:52215806-52215825 Msa1023920:intron 45.0%
GTCTGTAAAGCTTTCACTGG+TGG - chr7_1:52215837-52215856 Msa1023920:intron 45.0%
AACCGATACCGCTCAAATTC+AGG - chr7_1:52215973-52215992 Msa1023920:intron 45.0%
GTTTCAGGCCTGAATTTGAG+CGG + chr7_1:52215984-52216003 None:intergenic 45.0%
AGGCCTGAAACCATTTCTTG+TGG - chr7_1:52215993-52216012 Msa1023920:intron 45.0%
CAACATAGCTTCCACTAAGG+AGG + chr7_1:52216233-52216252 None:intergenic 45.0%
CTCCTTAGTGGAAGCTATGT+TGG - chr7_1:52216231-52216250 Msa1023920:five_prime_UTR 45.0%
TCCCAACATAGCTTCCACTA+AGG + chr7_1:52216236-52216255 None:intergenic 45.0%
!! ATTAAATATAAAAAATAACA+CGG - chr7_1:52206667-52206686 Msa1023920:CDS 5.0%
!! TATATTTATAACAAAAATTT+AGG + chr7_1:52214969-52214988 None:intergenic 5.0%
CAGAACGGTTCTCAGAGTGA+TGG + chr7_1:52206108-52206127 None:intergenic 50.0%
!! TGTGGCGGGTGAATGTTACT+TGG - chr7_1:52206809-52206828 Msa1023920:intron 50.0%
CTTGAATGCCTCTCCTTTGC+CGG - chr7_1:52206858-52206877 Msa1023920:intron 50.0%
TCTTCATCTTCCTCCGGCAA+AGG + chr7_1:52206874-52206893 None:intergenic 50.0%
!! TGAAGATCCTTTTGAGGGCC+AGG - chr7_1:52206888-52206907 Msa1023920:intron 50.0%
GCGCATTATACTCTTCGACC+TGG + chr7_1:52206909-52206928 None:intergenic 50.0%
GCGCAATATACTCTTCGACC+TGG + chr7_1:52206942-52206961 None:intergenic 50.0%
!! AAAGAGAGCGTCCAGATGAC+AGG - chr7_1:52207878-52207897 Msa1023920:intron 50.0%
AGGTGGCTGTGATACTTGCA+CGG + chr7_1:52207905-52207924 None:intergenic 50.0%
GATGGAAGTAAGCTTCCTCC+GGG - chr7_1:52207967-52207986 Msa1023920:intron 50.0%
AAGTAAGCTTCCTCCGGGTA+AGG - chr7_1:52207972-52207991 Msa1023920:intron 50.0%
CCAGGGAAGAAATCCTTACC+CGG + chr7_1:52207988-52208007 None:intergenic 50.0%
!!! TGTTCTTTTGGGGCTCTGAG+TGG - chr7_1:52208279-52208298 Msa1023920:intron 50.0%
!! TGTTACGTTGGCTTGCAGCT+TGG - chr7_1:52208869-52208888 Msa1023920:intron 50.0%
! GTTACTCAGGTCAGCATTGG+AGG - chr7_1:52209669-52209688 Msa1023920:intron 50.0%
! TTTTCTGATGCACGTCCTCC+AGG - chr7_1:52209778-52209797 Msa1023920:intron 50.0%
GCAGGACAGACTATCGTTTC+AGG + chr7_1:52209859-52209878 None:intergenic 50.0%
GATAGTCTGTCCTGCTACTC+CGG - chr7_1:52209864-52209883 Msa1023920:intron 50.0%
! ACTTTCTTTGGGAGAGGTGG+GGG - chr7_1:52210197-52210216 Msa1023920:CDS 50.0%
GTAACAATGGTGACCCCCTT+CGG - chr7_1:52210331-52210350 Msa1023920:intron 50.0%
ACAATCTGCTCAAGCCGAAG+GGG + chr7_1:52210348-52210367 None:intergenic 50.0%
ATGGGACATGGTCGTGTTTG+CGG - chr7_1:52210496-52210515 Msa1023920:intron 50.0%
CAGATACTCAAATTGGGGGC+TGG - chr7_1:52211027-52211046 Msa1023920:intron 50.0%
GATACTCAAATTGGGGGCTG+GGG - chr7_1:52211029-52211048 Msa1023920:intron 50.0%
TTGGTGGGGATGTATTCTGC+AGG - chr7_1:52211393-52211412 Msa1023920:intron 50.0%
GTTACAGAGGCTCCCAGTAA+AGG + chr7_1:52211588-52211607 None:intergenic 50.0%
TTTCTGAATGTGCAGGCCAG+AGG - chr7_1:52211959-52211978 Msa1023920:intron 50.0%
AAAGAAACTGGGTGTGACCC+TGG + chr7_1:52211998-52212017 None:intergenic 50.0%
CAACTGCGTGTCTGTGATAG+AGG - chr7_1:52212920-52212939 Msa1023920:intron 50.0%
CTGGTACAAACTTGGAGCAG+CGG - chr7_1:52213752-52213771 Msa1023920:intron 50.0%
ATCTTCCACCGCTCACAGAA+AGG + chr7_1:52213778-52213797 None:intergenic 50.0%
CTTCTGGTCTAATGCCAAGC+TGG - chr7_1:52214152-52214171 Msa1023920:intron 50.0%
GAAGCAGTATGCAGACCTTG+AGG + chr7_1:52214248-52214267 None:intergenic 50.0%
TGTATCAGTGGGCCTGTACT+TGG - chr7_1:52214918-52214937 Msa1023920:intron 50.0%
GTATCAGTGGGCCTGTACTT+GGG - chr7_1:52214919-52214938 Msa1023920:intron 50.0%
TTTAGGCAGGGGAAAGAGGA+GGG + chr7_1:52215082-52215101 None:intergenic 50.0%
ATTTAGGCAGGGGAAAGAGG+AGG + chr7_1:52215083-52215102 None:intergenic 50.0%
TCTAGCACCCACCAGAAAGT+TGG - chr7_1:52215289-52215308 Msa1023920:CDS 50.0%
CTAGCACCCACCAGAAAGTT+GGG - chr7_1:52215290-52215309 Msa1023920:CDS 50.0%
ACCCACCAGAAAGTTGGGTA+TGG - chr7_1:52215295-52215314 Msa1023920:CDS 50.0%
ATCATCGAGTGTGCTTGGGA+TGG - chr7_1:52215500-52215519 Msa1023920:intron 50.0%
GGCCTGAATTTGAGCGGTAT+CGG + chr7_1:52215978-52215997 None:intergenic 50.0%
!! TTGGGTACCGGTACCCTGTA+AGG - chr7_1:52206608-52206627 Msa1023920:intron 55.0%
! GGCGGGTGAATGTTACTTGG+TGG - chr7_1:52206812-52206831 Msa1023920:intron 55.0%
ATCTTCCTCCGGCAAAGGAG+AGG + chr7_1:52206869-52206888 None:intergenic 55.0%
TCTTCGACCTGGCCCTCAAA+AGG + chr7_1:52206898-52206917 None:intergenic 55.0%
GTGGAGCTGATATAGCTCGC+CGG - chr7_1:52206980-52206999 Msa1023920:intron 55.0%
TGGAGCTGATATAGCTCGCC+GGG - chr7_1:52206981-52207000 Msa1023920:intron 55.0%
CTTATCCCACTAAGCCGGGT+CGG + chr7_1:52207103-52207122 None:intergenic 55.0%
GGATTCCGGAAAACAGCGGT+TGG - chr7_1:52207234-52207253 Msa1023920:intron 55.0%
TAGCGGCGCTATAGCACTGT+TGG + chr7_1:52207268-52207287 None:intergenic 55.0%
GGTGGCTGTGATACTTGCAC+GGG + chr7_1:52207904-52207923 None:intergenic 55.0%
GTGCAAGTATCACAGCCACC+TGG - chr7_1:52207904-52207923 Msa1023920:intron 55.0%
GGGAAGAAATCCTTACCCGG+AGG + chr7_1:52207985-52208004 None:intergenic 55.0%
CCGGGTAAGGATTTCTTCCC+TGG - chr7_1:52207985-52208004 Msa1023920:intron 55.0%
GCTGCCTTGCTGGTGGTAAT+TGG - chr7_1:52208015-52208034 Msa1023920:intron 55.0%
TGGTTGGATTGCCCTTCGTC+TGG - chr7_1:52208511-52208530 Msa1023920:intron 55.0%
TAGATCCAATGCAAGGGCCG+CGG - chr7_1:52209084-52209103 Msa1023920:intron 55.0%
TGCTACTCCGGAGTGGAAGA+GGG - chr7_1:52209876-52209895 Msa1023920:intron 55.0%
CATACTTGCAACGGAGGACC+TGG + chr7_1:52209970-52209989 None:intergenic 55.0%
! TTTGGGTTTAGGGGGCCAAC+TGG - chr7_1:52210120-52210139 Msa1023920:intron 55.0%
CAATCTGCTCAAGCCGAAGG+GGG + chr7_1:52210347-52210366 None:intergenic 55.0%
GCTAGCCAGCCCTCAACTAA+AGG + chr7_1:52213409-52213428 None:intergenic 55.0%
TGGGAGAGGGAAATCCAGTG+TGG - chr7_1:52213485-52213504 Msa1023920:intron 55.0%
TCTGCGTCGTGTGAGAGCTT+CGG + chr7_1:52214039-52214058 None:intergenic 55.0%
AAGCTCTCACACGACGCAGA+TGG - chr7_1:52214039-52214058 Msa1023920:intron 55.0%
TGTCGGCATACATGGGAAGG+CGG + chr7_1:52215753-52215772 None:intergenic 55.0%
TCCTGTCGGCATACATGGGA+AGG + chr7_1:52215756-52215775 None:intergenic 55.0%
GAATGCCTCTCCTTTGCCGG+AGG - chr7_1:52206861-52206880 Msa1023920:intron 60.0%
ATGTAGCCGACCCGGCTTAG+TGG - chr7_1:52207094-52207113 Msa1023920:intron 60.0%
TGTAGCCGACCCGGCTTAGT+GGG - chr7_1:52207095-52207114 Msa1023920:intron 60.0%
CGACCCGGCTTAGTGGGATA+AGG - chr7_1:52207101-52207120 Msa1023920:intron 60.0%
ACTTGCACGGGCCTGTCATC+TGG + chr7_1:52207892-52207911 None:intergenic 60.0%
GCAAGGCAGCGAGTTGTCCA+GGG + chr7_1:52208005-52208024 None:intergenic 60.0%
AGCAAGGCAGCGAGTTGTCC+AGG + chr7_1:52208006-52208025 None:intergenic 60.0%
TGGACAACTCGCTGCCTTGC+TGG - chr7_1:52208005-52208024 Msa1023920:intron 60.0%
ACAACTCGCTGCCTTGCTGG+TGG - chr7_1:52208008-52208027 Msa1023920:intron 60.0%
!! CGTTGGCTTGCAGCTTGGTC+TGG - chr7_1:52208874-52208893 Msa1023920:intron 60.0%
TCTGTCCTGCTACTCCGGAG+TGG - chr7_1:52209869-52209888 Msa1023920:intron 60.0%
CTCTTCCACTCCGGAGTAGC+AGG + chr7_1:52209877-52209896 None:intergenic 60.0%
CTGCTACTCCGGAGTGGAAG+AGG - chr7_1:52209875-52209894 Msa1023920:intron 60.0%
TGTCGGTGGCCAGCTGTCAT+AGG + chr7_1:52210763-52210782 None:intergenic 60.0%
AGCAGCGGCCTTTCTGTGAG+CGG - chr7_1:52213767-52213786 Msa1023920:intron 60.0%
GGAAAGAGGAGGGCGGAAGA+GGG + chr7_1:52215072-52215091 None:intergenic 60.0%
GCCTTCCCATGTATGCCGAC+AGG - chr7_1:52215752-52215771 Msa1023920:intron 60.0%
GGATTGCCCTTCGTCTGGCC+AGG - chr7_1:52208516-52208535 Msa1023920:intron 65.0%
TCGGGAGCCCTCTTCCACTC+CGG + chr7_1:52209886-52209905 None:intergenic 65.0%
AGCGGCCTTTCTGTGAGCGG+TGG - chr7_1:52213770-52213789 Msa1023920:intron 65.0%
GGGAAAGAGGAGGGCGGAAG+AGG + chr7_1:52215073-52215092 None:intergenic 65.0%
AGGCAGGGGAAAGAGGAGGG+CGG + chr7_1:52215079-52215098 None:intergenic 65.0%
CTGAGCCGCGGCCCTTGCAT+TGG + chr7_1:52209092-52209111 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 52205930 52216286 52205930 ID=Msa1023920;Name=Msa1023920
chr7_1 mRNA 52205930 52216286 52205930 ID=Msa1023920-mRNA-1;Parent=Msa1023920;Name=Msa1023920-mRNA-1;_AED=0.13;_eAED=0.13;_QI=350|1|1|1|0.88|0.84|19|467|690
chr7_1 exon 52205930 52206531 52205930 ID=Msa1023920-mRNA-1:exon:10366;Parent=Msa1023920-mRNA-1
chr7_1 exon 52206618 52206748 52206618 ID=Msa1023920-mRNA-1:exon:10365;Parent=Msa1023920-mRNA-1
chr7_1 exon 52207412 52207493 52207412 ID=Msa1023920-mRNA-1:exon:10364;Parent=Msa1023920-mRNA-1
chr7_1 exon 52207613 52207702 52207613 ID=Msa1023920-mRNA-1:exon:10363;Parent=Msa1023920-mRNA-1
chr7_1 exon 52208142 52208240 52208142 ID=Msa1023920-mRNA-1:exon:10362;Parent=Msa1023920-mRNA-1
chr7_1 exon 52208331 52208444 52208331 ID=Msa1023920-mRNA-1:exon:10361;Parent=Msa1023920-mRNA-1
chr7_1 exon 52209275 52209412 52209275 ID=Msa1023920-mRNA-1:exon:10360;Parent=Msa1023920-mRNA-1
chr7_1 exon 52209518 52209680 52209518 ID=Msa1023920-mRNA-1:exon:10359;Parent=Msa1023920-mRNA-1
chr7_1 exon 52210193 52210242 52210193 ID=Msa1023920-mRNA-1:exon:10358;Parent=Msa1023920-mRNA-1
chr7_1 exon 52211166 52211285 52211166 ID=Msa1023920-mRNA-1:exon:10357;Parent=Msa1023920-mRNA-1
chr7_1 exon 52212232 52212450 52212232 ID=Msa1023920-mRNA-1:exon:10356;Parent=Msa1023920-mRNA-1
chr7_1 exon 52212539 52212670 52212539 ID=Msa1023920-mRNA-1:exon:10355;Parent=Msa1023920-mRNA-1
chr7_1 exon 52213067 52213129 52213067 ID=Msa1023920-mRNA-1:exon:10354;Parent=Msa1023920-mRNA-1
chr7_1 exon 52213246 52213329 52213246 ID=Msa1023920-mRNA-1:exon:10353;Parent=Msa1023920-mRNA-1
chr7_1 exon 52213556 52213707 52213556 ID=Msa1023920-mRNA-1:exon:10352;Parent=Msa1023920-mRNA-1
chr7_1 exon 52214228 52214366 52214228 ID=Msa1023920-mRNA-1:exon:10351;Parent=Msa1023920-mRNA-1
chr7_1 exon 52215214 52215459 52215214 ID=Msa1023920-mRNA-1:exon:10350;Parent=Msa1023920-mRNA-1
chr7_1 exon 52215903 52215947 52215903 ID=Msa1023920-mRNA-1:exon:10349;Parent=Msa1023920-mRNA-1
chr7_1 exon 52216066 52216286 52216066 ID=Msa1023920-mRNA-1:exon:10348;Parent=Msa1023920-mRNA-1
chr7_1 five_prime_UTR 52216066 52216286 52216066 ID=Msa1023920-mRNA-1:five_prime_utr;Parent=Msa1023920-mRNA-1
chr7_1 five_prime_UTR 52215903 52215947 52215903 ID=Msa1023920-mRNA-1:five_prime_utr;Parent=Msa1023920-mRNA-1
chr7_1 five_prime_UTR 52215376 52215459 52215376 ID=Msa1023920-mRNA-1:five_prime_utr;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52215214 52215375 52215214 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52214228 52214366 52214228 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52213556 52213707 52213556 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52213246 52213329 52213246 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52213067 52213129 52213067 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52212539 52212670 52212539 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52212232 52212450 52212232 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52211166 52211285 52211166 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52210193 52210242 52210193 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52209518 52209680 52209518 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52209275 52209412 52209275 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52208331 52208444 52208331 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52208142 52208240 52208142 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52207613 52207702 52207613 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52207412 52207493 52207412 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52206618 52206748 52206618 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 CDS 52206397 52206531 52206397 ID=Msa1023920-mRNA-1:cds;Parent=Msa1023920-mRNA-1
chr7_1 three_prime_UTR 52205930 52206396 52205930 ID=Msa1023920-mRNA-1:three_prime_utr;Parent=Msa1023920-mRNA-1
Gene Sequence

>Msa1023920

ATGACAATTTCTATGGACTTGAATGCCTCTCCTTTGCCGGAGGAAGATGAAGATCCTTTTGAGGGCCAGGTCGAAGAGTATAATGCGCCAAAAAAGGACCAGGTCGAAGAGTATATTGCGCCAGAAGAGCACATAGAAAGTGGAGCTGATATAGCTCGCCGGGAACGTGAAGAAAGAAAGAAACGGTTGAAAAGAGAGCGTCCAGATGACAGGCCCGTGCAAGTATCACAGCCACCTGGATATGATAATTTTTTCCATAATAAGATCCTTAAATCATATGATGGAAGTAAGCTTCCTCCGGGTTGGTTGGATTGCCCTTCGTCTGGCCAGGAAATTTTCGGCATGATACCTTCTAAGGTTCCATTGGGTGAATCCTTCACTGACGATATTTTACCTGGTAAAAGATACTCATTTAGACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTCATTGATCTGACAAATACTTCTCGATACTATCCAGTATCAGATCTAAAGAAAGAGGGTATCAAGCATGTTAAGATCCAATGCAAGGGCCGCGGCTCAGTACCTGATAATTCATCTGTCAATCACTTTGTGTACGAGGTTAGACAATTTTTATCGTGTCAAAAACACTCGAAGAAGTATATACTTGTTCATTGTACACATGGTCACAATCGTACAGGATATATGATTGTCCATTATCTAATGCGCACAATGTCAATGTCTGTTACTCAGGCGATAAAAATATTTTCTGATGCACGTCCTCCAGGAATCTATAAACCTGAGTATATTGATTCATTATATAAATTCTATCATGAAAAAAAGCCTGAAACGATAGTCTGTCCTGCTACTCCGGAGTGGAAGAGGGCTCCCGAACTTGTTGATCTCAATGGTGAAGCAGCTCCAGATAATGATGACGATGATGATGATGGAGTACCAGGTCCTCCGTTGCAAGAGAACCATGAGATTGACACAATAATGACAAACGATGATGTTTTGGGAGATGAGATACCTAATGATCAGCAAGATGCATTTCGGCAGTTCTGCTTTCAGATACTCAAATTGGGGGCTGGGGCCAGAGGACACATGCAATTTCCAGGGTCACACCCAGTTTCTTTAGACAGGGAAAATTTACAGCTGCTACGCCAGCGTTACTACTATGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGATGGATGCTTCTTGATTGATAGAAACTTCAATTTTAGAAGGATTCAAATGAGGTTTCCATGCAGGGTTGCAAATGATGGCTTGGCAGAGAAGACTCACCACTTCACATTACTTGATGGGGAGATGATTATTGATACAGTGCCAAATTCAAAAAAGCAGGCAAGGAGATACCTAATATATGATCTGATGGCGGTCAACTGCGTGTCTGTGATAGAGCGGCCTTTCTGTGAGCGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCCAGGAATCATGAACGGTACCATCGCAAACATCCTTACTATATATATGACATGGAGCCTTTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTGCTGTGACAAAACTTTTGAATGAATTCATTCCGAAGCTCTCACACGACGCAGATGGTCTCATATTTCAGGGATGGGACGATCCTTATGTACCTCGTACTCATGAAGGTCTCTTAAAGTGGAAATATGCTGCTCTGAATTCAGTTGATTTTCTCTTTGAGATTGTTGCTGATCGTCAGCTACTTTTTCTCTATGAACGTGGAAAAAAGAAACTCATGGAAGGGTTTATTGTTGCATTTGAAGAAGGTTCAGACCCCATGCTTTATTCTGGAAAGATCATCGAGTGTGCTTGGGATGGTGATAGAAACGAATGGATATTCAAGCGAGTCAGAACAGATAAGTCAACTCCCAATGACTTCAATACTTACAAGAAGGTGATGCGAAGCATAAAAGACAATATCACCGAGGATGTCCTGTTGACTGAAATAAACGAGATAATCCGCCTTCCCATGTATGCCGACAGGATAAGAATCGATAGCAAAGGACATCATGTAGCTAGGCGAAAGTAA
Protein sequence

>Msa1023920

MTISMDLNASPLPEEDEDPFEGQVEEYNAPKKDQVEEYIAPEEHIESGADIARREREERKKRLKRERPDDRPVQVSQPPGYDNFFHNKILKSYDGSKLPPGWLDCPSSGQEIFGMIPSKVPLGESFTDDILPGKRYSFRQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRGSVPDNSSVNHFVYEVRQFLSCQKHSKKYILVHCTHGHNRTGYMIVHYLMRTMSMSVTQAIKIFSDARPPGIYKPEYIDSLYKFYHEKKPETIVCPATPEWKRAPELVDLNGEAAPDNDDDDDDGVPGPPLQENHEIDTIMTNDDVLGDEIPNDQQDAFRQFCFQILKLGAGARGHMQFPGSHPVSLDRENLQLLRQRYYYATWKADGTRYMMLITMDGCFLIDRNFNFRRIQMRFPCRVANDGLAEKTHHFTLLDGEMIIDTVPNSKKQARRYLIYDLMAVNCVSVIERPFCERWKMLEKEVIEPRNHERYHRKHPYYIYDMEPFRVRRKDFWLLSAVTKLLNEFIPKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYAALNSVDFLFEIVADRQLLFLYERGKKKLMEGFIVAFEEGSDPMLYSGKIIECAWDGDRNEWIFKRVRTDKSTPNDFNTYKKVMRSIKDNITEDVLLTEINEIIRLPMYADRIRIDSKGHHVARRK*