Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776940 | sp|B0ZB57|OMT3_HUMLU | 61.111 | 360 | 131 | 4 | 6 | 357 | 19 | 377 | 1.20e-158 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776940 | G7KFJ3 | 89.722 | 360 | 34 | 1 | 1 | 357 | 1 | 360 | 0.0 | 662 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa0776940 | 0.801950 | 7.069168e-49 | -8.615850e-47 |
| Msa0045810 | Msa0776940 | 0.806718 | 7.179261e-50 | -8.615850e-47 |
| Msa0646430 | Msa0776940 | 0.810786 | 9.694543e-51 | -8.615850e-47 |
| Msa0735010 | Msa0776940 | 0.922125 | 1.474932e-88 | -8.615850e-47 |
| Msa0776940 | Msa0819310 | 0.824114 | 9.619506e-54 | -8.615850e-47 |
| Msa0776940 | Msa0880910 | 0.805353 | 1.390777e-49 | -8.615850e-47 |
| Msa0776940 | Msa0966830 | 0.800079 | 1.705073e-48 | -8.615850e-47 |
| Msa0776940 | Msa0967780 | 0.803140 | 4.018499e-49 | -8.615850e-47 |
| Msa0776940 | Msa1029820 | 0.804924 | 1.710023e-49 | -8.615850e-47 |
| Msa0776940 | Msa1068940 | 0.814425 | 1.550671e-51 | -8.615850e-47 |
| Msa0776940 | Msa1156710 | 0.806450 | 8.177390e-50 | -8.615850e-47 |
| Msa0776940 | Msa1164680 | 0.833036 | 6.717391e-56 | -8.615850e-47 |
| Msa0776940 | Msa1206920 | 0.805957 | 1.038501e-49 | -8.615850e-47 |
| Msa0776940 | Msa1220720 | 0.800610 | 1.329739e-48 | -8.615850e-47 |
| Msa0776940 | Msa1223860 | 0.804959 | 1.681807e-49 | -8.615850e-47 |
| Msa0776940 | Msa1250660 | 0.829731 | 4.367808e-55 | -8.615850e-47 |
| Msa0776940 | Msa1257200 | 0.815896 | 7.309604e-52 | -8.615850e-47 |
| Msa0776940 | Msa1263050 | 0.803262 | 3.791580e-49 | -8.615850e-47 |
| Msa0776940 | Msa1265570 | 0.808016 | 3.809568e-50 | -8.615850e-47 |
| Msa0776940 | Msa1283980 | 0.824397 | 8.253708e-54 | -8.615850e-47 |
| Msa0776940 | Msa1321010 | 0.807194 | 5.692925e-50 | -8.615850e-47 |
| Msa0776940 | Msa1322980 | 0.820924 | 5.302479e-53 | -8.615850e-47 |
| Msa0776940 | Msa1334670 | 0.812063 | 5.118188e-51 | -8.615850e-47 |
| Msa0776940 | Msa1365230 | 0.808280 | 3.346931e-50 | -8.615850e-47 |
| Msa0776940 | Msa1368420 | 0.827763 | 1.307250e-54 | -8.615850e-47 |
| Msa0776940 | Msa1383220 | 0.825987 | 3.474066e-54 | -8.615850e-47 |
| Msa0776940 | Msa1407810 | 0.804403 | 2.196655e-49 | -8.615850e-47 |
| Msa0776940 | Msa1433360 | 0.805223 | 1.481029e-49 | -8.615850e-47 |
| Msa0776940 | Msa1437780 | 0.805164 | 1.523820e-49 | -8.615850e-47 |
| Msa0776940 | Msa1438510 | 0.820512 | 6.594589e-53 | -8.615850e-47 |
| Msa0139500 | Msa0776940 | 0.832142 | 1.118884e-55 | -8.615850e-47 |
| Msa0206370 | Msa0776940 | 0.812543 | 4.022029e-51 | -8.615850e-47 |
| Msa0386910 | Msa0776940 | 0.824882 | 6.345288e-54 | -8.615850e-47 |
| Msa0437480 | Msa0776940 | 0.802508 | 5.425870e-49 | -8.615850e-47 |
| Msa0282830 | Msa0776940 | 0.815384 | 9.502880e-52 | -8.615850e-47 |
| Msa0523720 | Msa0776940 | 0.802592 | 5.215531e-49 | -8.615850e-47 |
| Msa0567330 | Msa0776940 | 0.801369 | 9.301123e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776940 | MtrunA17_Chr5g0432241 | 89.722 | 360 | 34 | 1 | 1 | 357 | 1 | 360 | 0.0 | 662 |
| Msa0776940 | MtrunA17_Chr5g0432301 | 81.337 | 359 | 64 | 1 | 1 | 356 | 1 | 359 | 0.0 | 607 |
| Msa0776940 | MtrunA17_Chr5g0432251 | 78.889 | 360 | 72 | 2 | 1 | 357 | 1 | 359 | 0.0 | 585 |
| Msa0776940 | MtrunA17_Chr5g0432211 | 73.889 | 360 | 76 | 3 | 1 | 357 | 1 | 345 | 0.0 | 542 |
| Msa0776940 | MtrunA17_Chr5g0432261 | 71.389 | 360 | 67 | 4 | 1 | 357 | 1 | 327 | 0.0 | 512 |
| Msa0776940 | MtrunA17_Chr4g0040621 | 61.496 | 361 | 129 | 6 | 1 | 357 | 15 | 369 | 1.13e-158 | 449 |
| Msa0776940 | MtrunA17_Chr4g0014681 | 48.087 | 366 | 178 | 7 | 1 | 357 | 1 | 363 | 1.88e-107 | 319 |
| Msa0776940 | MtrunA17_Chr4g0014561 | 48.087 | 366 | 178 | 8 | 1 | 357 | 1 | 363 | 4.49e-107 | 318 |
| Msa0776940 | MtrunA17_Chr1g0188391 | 44.658 | 365 | 190 | 8 | 1 | 357 | 1 | 361 | 2.11e-105 | 313 |
| Msa0776940 | MtrunA17_Chr7g0219141 | 44.886 | 352 | 183 | 6 | 12 | 357 | 11 | 357 | 5.39e-104 | 310 |
| Msa0776940 | MtrunA17_Chr4g0014641 | 47.253 | 364 | 178 | 8 | 3 | 357 | 5 | 363 | 1.09e-103 | 309 |
| Msa0776940 | MtrunA17_Chr4g0046361 | 44.193 | 353 | 188 | 6 | 12 | 357 | 11 | 361 | 2.23e-103 | 308 |
| Msa0776940 | MtrunA17_Chr7g0223241 | 43.575 | 358 | 189 | 6 | 1 | 355 | 1 | 348 | 9.66e-100 | 298 |
| Msa0776940 | MtrunA17_Chr7g0219161 | 45.161 | 341 | 176 | 6 | 11 | 345 | 10 | 345 | 2.07e-99 | 298 |
| Msa0776940 | MtrunA17_Chr7g0223231 | 42.458 | 358 | 193 | 6 | 1 | 355 | 1 | 348 | 2.16e-99 | 298 |
| Msa0776940 | MtrunA17_Chr4g0046341 | 46.067 | 356 | 180 | 7 | 12 | 357 | 11 | 364 | 2.96e-99 | 298 |
| Msa0776940 | MtrunA17_Chr4g0046531 | 43.017 | 358 | 196 | 5 | 3 | 356 | 2 | 355 | 3.82e-91 | 288 |
| Msa0776940 | MtrunA17_Chr4g0046531 | 42.618 | 359 | 198 | 5 | 3 | 357 | 364 | 718 | 4.62e-91 | 287 |
| Msa0776940 | MtrunA17_Chr4g0014661 | 43.923 | 362 | 189 | 7 | 2 | 357 | 4 | 357 | 2.33e-88 | 270 |
| Msa0776940 | MtrunA17_Chr1g0188371 | 41.003 | 339 | 192 | 5 | 5 | 337 | 4 | 340 | 3.80e-87 | 267 |
| Msa0776940 | MtrunA17_Chr4g0014591 | 42.541 | 362 | 194 | 7 | 2 | 357 | 4 | 357 | 2.99e-84 | 259 |
| Msa0776940 | MtrunA17_Chr3g0121301 | 36.499 | 337 | 204 | 5 | 21 | 353 | 27 | 357 | 9.49e-71 | 225 |
| Msa0776940 | MtrunA17_Chr4g0021981 | 38.000 | 350 | 204 | 9 | 15 | 357 | 25 | 368 | 1.49e-69 | 222 |
| Msa0776940 | MtrunA17_Chr4g0022021 | 36.571 | 350 | 209 | 8 | 15 | 357 | 25 | 368 | 2.78e-63 | 206 |
| Msa0776940 | MtrunA17_Chr4g0014601 | 40.239 | 251 | 140 | 5 | 1 | 248 | 3 | 246 | 1.41e-60 | 195 |
| Msa0776940 | MtrunA17_Chr7g0276401 | 31.212 | 330 | 210 | 11 | 32 | 352 | 47 | 368 | 7.66e-40 | 144 |
| Msa0776940 | MtrunA17_Chr8g0367441 | 29.305 | 331 | 192 | 8 | 32 | 338 | 46 | 358 | 1.79e-38 | 141 |
| Msa0776940 | MtrunA17_Chr7g0219171 | 51.493 | 134 | 60 | 3 | 227 | 357 | 117 | 248 | 3.57e-38 | 137 |
| Msa0776940 | MtrunA17_Chr7g0219171 | 45.455 | 110 | 56 | 1 | 12 | 121 | 11 | 116 | 3.12e-22 | 94.4 |
| Msa0776940 | MtrunA17_Chr7g0276411 | 29.141 | 326 | 209 | 11 | 31 | 342 | 30 | 347 | 1.83e-37 | 138 |
| Msa0776940 | MtrunA17_Chr8g0367501 | 27.451 | 357 | 197 | 9 | 20 | 342 | 20 | 348 | 9.33e-37 | 137 |
| Msa0776940 | MtrunA17_Chr3g0128011 | 28.704 | 324 | 211 | 10 | 32 | 343 | 88 | 403 | 9.48e-37 | 137 |
| Msa0776940 | MtrunA17_Chr5g0448091 | 28.440 | 327 | 211 | 10 | 32 | 344 | 33 | 350 | 2.03e-36 | 135 |
| Msa0776940 | MtrunA17_Chr8g0345851 | 32.975 | 279 | 167 | 9 | 86 | 356 | 23 | 289 | 8.69e-36 | 131 |
| Msa0776940 | MtrunA17_Chr8g0367491 | 28.000 | 350 | 188 | 8 | 30 | 342 | 39 | 361 | 9.05e-36 | 134 |
| Msa0776940 | MtrunA17_Chr8g0367451 | 29.321 | 324 | 209 | 9 | 30 | 338 | 39 | 357 | 3.59e-35 | 132 |
| Msa0776940 | MtrunA17_Chr1g0200491 | 27.628 | 333 | 218 | 9 | 27 | 344 | 34 | 358 | 6.64e-35 | 131 |
| Msa0776940 | MtrunA17_Chr1g0163611 | 29.504 | 383 | 213 | 14 | 5 | 356 | 13 | 369 | 3.67e-33 | 126 |
| Msa0776940 | MtrunA17_Chr3g0085201 | 28.571 | 357 | 226 | 12 | 1 | 343 | 1 | 342 | 7.47e-33 | 125 |
| Msa0776940 | MtrunA17_Chr1g0163601 | 28.609 | 381 | 235 | 12 | 1 | 356 | 1 | 369 | 1.07e-32 | 125 |
| Msa0776940 | MtrunA17_Chr7g0218301 | 26.836 | 354 | 217 | 12 | 27 | 352 | 34 | 373 | 4.31e-32 | 124 |
| Msa0776940 | MtrunA17_Chr7g0218271 | 27.119 | 354 | 216 | 13 | 27 | 352 | 34 | 373 | 7.31e-32 | 123 |
| Msa0776940 | MtrunA17_Chr7g0218261 | 26.686 | 341 | 228 | 10 | 27 | 352 | 33 | 366 | 9.48e-32 | 122 |
| Msa0776940 | MtrunA17_Chr2g0307521 | 27.309 | 249 | 163 | 7 | 115 | 356 | 125 | 362 | 1.20e-30 | 119 |
| Msa0776940 | MtrunA17_Chr3g0085211 | 29.688 | 320 | 210 | 10 | 34 | 344 | 43 | 356 | 7.61e-30 | 117 |
| Msa0776940 | MtrunA17_Chr7g0218131 | 25.532 | 329 | 228 | 9 | 27 | 344 | 34 | 356 | 4.98e-29 | 115 |
| Msa0776940 | MtrunA17_Chr7g0218211 | 25.656 | 343 | 235 | 10 | 27 | 356 | 33 | 368 | 5.99e-29 | 115 |
| Msa0776940 | MtrunA17_Chr7g0218181 | 27.347 | 245 | 169 | 5 | 116 | 356 | 127 | 366 | 9.24e-29 | 114 |
| Msa0776940 | MtrunA17_Chr8g0367381 | 34.783 | 184 | 107 | 6 | 147 | 324 | 149 | 325 | 1.69e-28 | 113 |
| Msa0776940 | MtrunA17_Chr1g0163621 | 27.410 | 332 | 222 | 9 | 26 | 344 | 44 | 369 | 3.02e-28 | 113 |
| Msa0776940 | MtrunA17_Chr2g0314271 | 28.349 | 321 | 212 | 9 | 32 | 342 | 27 | 339 | 6.78e-27 | 109 |
| Msa0776940 | MtrunA17_Chr3g0130061 | 26.571 | 350 | 234 | 13 | 8 | 342 | 2 | 343 | 2.19e-24 | 102 |
| Msa0776940 | MtrunA17_Chr3g0130011 | 26.857 | 350 | 233 | 14 | 8 | 342 | 2 | 343 | 8.30e-24 | 100 |
| Msa0776940 | MtrunA17_Chr4g0014611 | 57.843 | 102 | 42 | 1 | 256 | 357 | 7 | 107 | 6.17e-22 | 89.4 |
| Msa0776940 | MtrunA17_Chr6g0482291 | 30.814 | 172 | 106 | 6 | 173 | 342 | 1 | 161 | 4.66e-18 | 80.9 |
| Msa0776940 | MtrunA17_Chr4g0014671 | 56.436 | 101 | 43 | 1 | 257 | 357 | 35 | 134 | 2.33e-17 | 77.8 |
| Msa0776940 | MtrunA17_Chr8g0367401 | 36.364 | 99 | 62 | 1 | 150 | 248 | 2 | 99 | 5.56e-17 | 77.0 |
| Msa0776940 | MtrunA17_Chr8g0367461 | 43.373 | 83 | 44 | 1 | 257 | 339 | 15 | 94 | 6.96e-14 | 67.4 |
| Msa0776940 | MtrunA17_Chr4g0011691 | 42.268 | 97 | 51 | 4 | 258 | 353 | 140 | 232 | 1.38e-13 | 69.7 |
| Msa0776940 | MtrunA17_Chr4g0011691 | 29.771 | 131 | 75 | 4 | 16 | 143 | 22 | 138 | 5.75e-11 | 62.0 |
| Msa0776940 | MtrunA17_Chr8g0367391 | 45.238 | 84 | 39 | 4 | 257 | 338 | 37 | 115 | 5.04e-12 | 62.8 |
| Msa0776940 | MtrunA17_Chr8g0367421 | 32.323 | 99 | 49 | 3 | 150 | 248 | 2 | 82 | 7.86e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776940 | AT4G35160.1 | 33.871 | 372 | 220 | 11 | 4 | 356 | 16 | 380 | 6.57e-59 | 195 |
| Msa0776940 | AT4G35150.1 | 32.055 | 365 | 193 | 10 | 4 | 356 | 2 | 323 | 1.54e-52 | 177 |
| Msa0776940 | AT1G51990.2 | 32.131 | 305 | 190 | 9 | 63 | 357 | 65 | 362 | 3.98e-41 | 148 |
| Msa0776940 | AT1G51990.1 | 32.131 | 305 | 190 | 9 | 63 | 357 | 65 | 362 | 4.28e-41 | 148 |
| Msa0776940 | AT5G54160.1 | 30.312 | 320 | 209 | 9 | 32 | 343 | 34 | 347 | 9.87e-41 | 147 |
| Msa0776940 | AT1G33030.1 | 32.000 | 325 | 199 | 13 | 32 | 343 | 21 | 336 | 4.48e-36 | 134 |
| Msa0776940 | AT1G77520.1 | 27.078 | 373 | 242 | 11 | 2 | 356 | 20 | 380 | 8.23e-33 | 126 |
| Msa0776940 | AT3G53140.1 | 29.969 | 327 | 204 | 12 | 32 | 342 | 27 | 344 | 5.38e-32 | 123 |
| Msa0776940 | AT5G53810.1 | 31.034 | 348 | 211 | 15 | 30 | 356 | 38 | 377 | 2.75e-29 | 116 |
| Msa0776940 | AT1G21130.1 | 28.614 | 332 | 203 | 13 | 32 | 342 | 40 | 358 | 1.02e-26 | 109 |
| Msa0776940 | AT1G63140.2 | 27.887 | 355 | 226 | 12 | 2 | 338 | 20 | 362 | 6.40e-26 | 107 |
| Msa0776940 | AT1G77530.1 | 28.732 | 355 | 223 | 12 | 2 | 338 | 20 | 362 | 8.70e-26 | 107 |
| Msa0776940 | AT1G63140.4 | 27.887 | 355 | 226 | 12 | 2 | 338 | 40 | 382 | 1.07e-25 | 107 |
| Msa0776940 | AT1G21110.1 | 27.660 | 329 | 204 | 13 | 32 | 339 | 40 | 355 | 2.77e-24 | 102 |
| Msa0776940 | AT5G37170.2 | 32.394 | 213 | 129 | 8 | 151 | 356 | 29 | 233 | 9.90e-24 | 98.6 |
| Msa0776940 | AT5G37170.1 | 32.394 | 213 | 129 | 8 | 151 | 356 | 129 | 333 | 1.04e-23 | 100 |
| Msa0776940 | AT1G21100.1 | 27.027 | 333 | 209 | 13 | 32 | 343 | 40 | 359 | 3.57e-23 | 99.8 |
| Msa0776940 | AT1G21120.1 | 27.410 | 332 | 207 | 13 | 32 | 342 | 40 | 358 | 4.13e-23 | 99.4 |
| Msa0776940 | AT1G21120.2 | 27.327 | 333 | 208 | 13 | 32 | 343 | 88 | 407 | 7.19e-23 | 99.4 |
| Msa0776940 | AT1G76790.1 | 25.680 | 331 | 208 | 11 | 32 | 338 | 30 | 346 | 6.91e-21 | 93.2 |
| Msa0776940 | AT1G62900.1 | 32.212 | 208 | 133 | 4 | 153 | 356 | 1 | 204 | 7.20e-21 | 89.7 |
| Msa0776940 | AT5G37170.3 | 33.333 | 186 | 109 | 7 | 181 | 356 | 5 | 185 | 1.66e-20 | 88.2 |
| Msa0776940 | AT1G33030.2 | 29.075 | 227 | 149 | 8 | 32 | 250 | 21 | 243 | 5.56e-17 | 80.1 |
| Msa0776940 | AT1G33030.3 | 29.075 | 227 | 149 | 8 | 32 | 250 | 21 | 243 | 7.95e-17 | 80.1 |
Find 69 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACATTCTCTTCATTATTT+TGG | 0.038167 | 5_2:-55661640 | None:intergenic |
| CTTAAATGTGTTGTTGATTT+AGG | 0.154523 | 5_2:+55661731 | Msa0776940:CDS |
| CGACACACGGGATGTTGATA+TGG | 0.233179 | 5_2:+55662077 | Msa0776940:CDS |
| AGAGACCTTAAGCCTAAAAT+TGG | 0.252210 | 5_2:-55662777 | None:intergenic |
| CCATAATTGTGTATGATATC+AGG | 0.254841 | 5_2:-55661758 | None:intergenic |
| CCTGATATCATACACAATTA+TGG | 0.284388 | 5_2:+55661758 | Msa0776940:CDS |
| ATGCGAATAATGACTCATTC+TGG | 0.312409 | 5_2:+55661857 | Msa0776940:CDS |
| CGTGGCATCAATTCTCTACT+TGG | 0.365039 | 5_2:+55662023 | Msa0776940:CDS |
| GCTTTGAGCTTTGAGTAAAT+TGG | 0.373576 | 5_2:-55661666 | None:intergenic |
| TGCAGTGGATATTGCATGAT+TGG | 0.384572 | 5_2:+55662508 | Msa0776940:intron |
| TGCCACGGGTTTGTCAAAAC+TGG | 0.395490 | 5_2:-55662007 | None:intergenic |
| ATGGATTAAGTTGATTTCTT+CGG | 0.409901 | 5_2:+55662728 | Msa0776940:CDS |
| TGCTAAATCATTCCCACAAA+TGG | 0.411413 | 5_2:+55662267 | Msa0776940:CDS |
| ATTCAATGGATTGGAGTCAT+TGG | 0.421743 | 5_2:+55662204 | Msa0776940:CDS |
| TCAAAGCTCAAAGCCACATA+TGG | 0.423149 | 5_2:+55661675 | Msa0776940:CDS |
| AAGAGAGAAACGAGAAAGAA+TGG | 0.424421 | 5_2:+55662709 | Msa0776940:CDS |
| TGCATCCGTATTACTACTTA+AGG | 0.425584 | 5_2:+55661940 | Msa0776940:CDS |
| TTGGAGTCATTGGTTGATGT+TGG | 0.427653 | 5_2:+55662214 | Msa0776940:CDS |
| TTTGTTGATTGAAAAGTGTA+GGG | 0.454603 | 5_2:+55662177 | Msa0776940:CDS |
| GTTGATGTTGGAGGAGGCAC+AGG | 0.457563 | 5_2:+55662226 | Msa0776940:CDS |
| ATTGTCCTTAAGTAGTAATA+CGG | 0.459915 | 5_2:-55661945 | None:intergenic |
| AGTGAGAATTTAAACTATGT+TGG | 0.463618 | 5_2:+55662337 | Msa0776940:CDS |
| CTTCTTTGATATGTTGATGA+TGG | 0.474685 | 5_2:+55662671 | Msa0776940:CDS |
| AAGACACTGCACTCCATTTG+TGG | 0.477005 | 5_2:-55662280 | None:intergenic |
| AACAAAATGGCATCTGTTGG+AGG | 0.481762 | 5_2:-55662380 | None:intergenic |
| TGTGTCGTTTCAAATGTTGT+AGG | 0.487417 | 5_2:-55662061 | None:intergenic |
| AGGCACAGGGACCACGGCAA+AGG | 0.489359 | 5_2:+55662240 | Msa0776940:CDS |
| ACGAATGGCGTCACGCTCAT+TGG | 0.491626 | 5_2:-55661968 | None:intergenic |
| TAGGGGAGTATTCAATGGAT+TGG | 0.495288 | 5_2:+55662195 | Msa0776940:CDS |
| GACACACGGGATGTTGATAT+GGG | 0.503724 | 5_2:+55662078 | Msa0776940:CDS |
| AAGTGTAGGGGAGTATTCAA+TGG | 0.504991 | 5_2:+55662190 | Msa0776940:CDS |
| CATGTTGTCGATGGCTTGCA+AGG | 0.506491 | 5_2:+55662313 | Msa0776940:CDS |
| GATCTCCCACATGTTGTCGA+TGG | 0.507007 | 5_2:+55662304 | Msa0776940:CDS |
| TGAAAATGTGATTCCATATG+TGG | 0.508708 | 5_2:-55661688 | None:intergenic |
| AAACTTATTCAATGAGTCCA+TGG | 0.509220 | 5_2:+55662129 | Msa0776940:CDS |
| ATAGCAAAGAAAGGTAAAGA+AGG | 0.509576 | 5_2:+55662576 | Msa0776940:CDS |
| AGACACTGCACTCCATTTGT+GGG | 0.511364 | 5_2:-55662279 | None:intergenic |
| GAGAATTTAAACTATGTTGG+TGG | 0.520299 | 5_2:+55662340 | Msa0776940:CDS |
| TTCAACAAAATGGCATCTGT+TGG | 0.521370 | 5_2:-55662383 | None:intergenic |
| AAAGAAAGGTAAAGAAGGGA+AGG | 0.534278 | 5_2:+55662581 | Msa0776940:CDS |
| ATTTGTTGATTGAAAAGTGT+AGG | 0.534400 | 5_2:+55662176 | Msa0776940:CDS |
| TCGAGCATCGCATGCACGAA+TGG | 0.541584 | 5_2:-55661983 | None:intergenic |
| ATTAAGTTGATTTCTTCGGC+TGG | 0.550414 | 5_2:+55662732 | Msa0776940:CDS |
| GAGTCATTGGTTGATGTTGG+AGG | 0.554899 | 5_2:+55662217 | Msa0776940:CDS |
| ATGGTGTTGGAAAGTGAGAA+GGG | 0.555376 | 5_2:+55662618 | Msa0776940:CDS |
| TGCAAGCCATCGACAACATG+TGG | 0.556174 | 5_2:-55662310 | None:intergenic |
| TCATTGGTTGATGTTGGAGG+AGG | 0.559528 | 5_2:+55662220 | Msa0776940:CDS |
| CATGGTGTTGGAAAGTGAGA+AGG | 0.565194 | 5_2:+55662617 | Msa0776940:CDS |
| TTGATGATGGTAGTACTCAC+AGG | 0.567324 | 5_2:+55662684 | Msa0776940:CDS |
| AACAACACATTTAAGTGACA+TGG | 0.577803 | 5_2:-55661723 | None:intergenic |
| AAGGATGCAATAGCAAAGAA+AGG | 0.578531 | 5_2:+55662567 | Msa0776940:CDS |
| AAGTAGTAATACGGATGCAT+CGG | 0.581276 | 5_2:-55661936 | None:intergenic |
| TAGCAAAGAAAGGTAAAGAA+GGG | 0.583690 | 5_2:+55662577 | Msa0776940:CDS |
| TCATTATTCGCATCAAGCGA+TGG | 0.586198 | 5_2:-55661847 | None:intergenic |
| TTTGTGGGAATGATTTAGCA+AGG | 0.587728 | 5_2:-55662264 | None:intergenic |
| TTGTGGGAATGATTTAGCAA+GGG | 0.591958 | 5_2:-55662263 | None:intergenic |
| TTTAGCAAGGGCCTTTGCCG+TGG | 0.594298 | 5_2:-55662251 | None:intergenic |
| TAATTGAGCATCACTTGCCA+TGG | 0.595486 | 5_2:-55662146 | None:intergenic |
| AAGTAGAGAATTGATGCCAC+GGG | 0.597289 | 5_2:-55662021 | None:intergenic |
| GATTGTGATAGACATGGTGT+TGG | 0.599108 | 5_2:+55662605 | Msa0776940:CDS |
| CAAGTAGAGAATTGATGCCA+CGG | 0.608243 | 5_2:-55662022 | None:intergenic |
| TGGAGGAGGCACAGGGACCA+CGG | 0.615361 | 5_2:+55662234 | Msa0776940:CDS |
| ACAACATTTGAAACGACACA+CGG | 0.615695 | 5_2:+55662064 | Msa0776940:CDS |
| TTGTTGATTGAAAAGTGTAG+GGG | 0.631295 | 5_2:+55662178 | Msa0776940:CDS |
| TTGATGTTGGAGGAGGCACA+GGG | 0.656877 | 5_2:+55662227 | Msa0776940:CDS |
| CAACATTTGAAACGACACAC+GGG | 0.671406 | 5_2:+55662065 | Msa0776940:CDS |
| GCAAGCCATCGACAACATGT+GGG | 0.678688 | 5_2:-55662309 | None:intergenic |
| TTTAAATTTAGAGTCACGCG+CGG | 0.701266 | 5_2:-55662107 | None:intergenic |
| GAAGGTGATTGTGATAGACA+TGG | 0.741542 | 5_2:+55662599 | Msa0776940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAATGTGTAAAAATATTA+AGG | + | chr5_2:55662538-55662557 | Msa0776940:CDS | 15.0% |
| !! | AAAAATATTAAGGAATTGTA+AGG | + | chr5_2:55662548-55662567 | Msa0776940:CDS | 15.0% |
| !! | ATGAATGTGTAAAAATATTA+AGG | + | chr5_2:55662538-55662557 | Msa0776940:CDS | 15.0% |
| !! | AAAAATATTAAGGAATTGTA+AGG | + | chr5_2:55662548-55662567 | Msa0776940:CDS | 15.0% |
| !!! | AACATTCTCTTCATTATTTT+GGG | - | chr5_2:55661642-55661661 | None:intergenic | 20.0% |
| !!! | AACATTCTCTTCATTATTTT+GGG | - | chr5_2:55661642-55661661 | None:intergenic | 20.0% |
| !! | CAACATTCTCTTCATTATTT+TGG | - | chr5_2:55661643-55661662 | None:intergenic | 25.0% |
| !!! | CTTAAATGTGTTGTTGATTT+AGG | + | chr5_2:55661731-55661750 | Msa0776940:CDS | 25.0% |
| !!! | AATAAGTTTTGAGAGTGATA+TGG | - | chr5_2:55661789-55661808 | None:intergenic | 25.0% |
| ! | ATTGTCCTTAAGTAGTAATA+CGG | - | chr5_2:55661948-55661967 | None:intergenic | 25.0% |
| !! | ACACTTTTCAATCAACAAAT+TGG | - | chr5_2:55662176-55662195 | None:intergenic | 25.0% |
| !! | ATTTGTTGATTGAAAAGTGT+AGG | + | chr5_2:55662176-55662195 | Msa0776940:CDS | 25.0% |
| !! | TTTGTTGATTGAAAAGTGTA+GGG | + | chr5_2:55662177-55662196 | Msa0776940:CDS | 25.0% |
| ! | AGTGAGAATTTAAACTATGT+TGG | + | chr5_2:55662337-55662356 | Msa0776940:CDS | 25.0% |
| !! | ACATTTTACCTTCAACAAAA+TGG | - | chr5_2:55662396-55662415 | None:intergenic | 25.0% |
| !!! | ATGGATTAAGTTGATTTCTT+CGG | + | chr5_2:55662728-55662747 | Msa0776940:CDS | 25.0% |
| !! | TACAAGATTACTCCAATTTT+AGG | + | chr5_2:55662765-55662784 | Msa0776940:CDS | 25.0% |
| !! | CAACATTCTCTTCATTATTT+TGG | - | chr5_2:55661643-55661662 | None:intergenic | 25.0% |
| !!! | CTTAAATGTGTTGTTGATTT+AGG | + | chr5_2:55661731-55661750 | Msa0776940:CDS | 25.0% |
| !!! | AATAAGTTTTGAGAGTGATA+TGG | - | chr5_2:55661789-55661808 | None:intergenic | 25.0% |
| ! | ATTGTCCTTAAGTAGTAATA+CGG | - | chr5_2:55661948-55661967 | None:intergenic | 25.0% |
| !! | ACACTTTTCAATCAACAAAT+TGG | - | chr5_2:55662176-55662195 | None:intergenic | 25.0% |
| !! | ATTTGTTGATTGAAAAGTGT+AGG | + | chr5_2:55662176-55662195 | Msa0776940:CDS | 25.0% |
| !! | TTTGTTGATTGAAAAGTGTA+GGG | + | chr5_2:55662177-55662196 | Msa0776940:CDS | 25.0% |
| ! | AGTGAGAATTTAAACTATGT+TGG | + | chr5_2:55662337-55662356 | Msa0776940:CDS | 25.0% |
| !! | ACATTTTACCTTCAACAAAA+TGG | - | chr5_2:55662396-55662415 | None:intergenic | 25.0% |
| !!! | ATGGATTAAGTTGATTTCTT+CGG | + | chr5_2:55662728-55662747 | Msa0776940:CDS | 25.0% |
| !! | TACAAGATTACTCCAATTTT+AGG | + | chr5_2:55662765-55662784 | Msa0776940:CDS | 25.0% |
| TGAAAATGTGATTCCATATG+TGG | - | chr5_2:55661691-55661710 | None:intergenic | 30.0% | |
| AACAACACATTTAAGTGACA+TGG | - | chr5_2:55661726-55661745 | None:intergenic | 30.0% | |
| CCATAATTGTGTATGATATC+AGG | - | chr5_2:55661761-55661780 | None:intergenic | 30.0% | |
| CCTGATATCATACACAATTA+TGG | + | chr5_2:55661758-55661777 | Msa0776940:CDS | 30.0% | |
| AAACTTATTCAATGAGTCCA+TGG | + | chr5_2:55662129-55662148 | Msa0776940:CDS | 30.0% | |
| ! | TTGTTGATTGAAAAGTGTAG+GGG | + | chr5_2:55662178-55662197 | Msa0776940:CDS | 30.0% |
| GAGAATTTAAACTATGTTGG+TGG | + | chr5_2:55662340-55662359 | Msa0776940:CDS | 30.0% | |
| AAGTCTGAATAAAATTGCAG+TGG | + | chr5_2:55662493-55662512 | Msa0776940:intron | 30.0% | |
| ATAGCAAAGAAAGGTAAAGA+AGG | + | chr5_2:55662576-55662595 | Msa0776940:CDS | 30.0% | |
| TAGCAAAGAAAGGTAAAGAA+GGG | + | chr5_2:55662577-55662596 | Msa0776940:CDS | 30.0% | |
| ! | CTTCTTTGATATGTTGATGA+TGG | + | chr5_2:55662671-55662690 | Msa0776940:CDS | 30.0% |
| ! | TTACTCCAATTTTAGGCTTA+AGG | + | chr5_2:55662772-55662791 | Msa0776940:CDS | 30.0% |
| TGAAAATGTGATTCCATATG+TGG | - | chr5_2:55661691-55661710 | None:intergenic | 30.0% | |
| AACAACACATTTAAGTGACA+TGG | - | chr5_2:55661726-55661745 | None:intergenic | 30.0% | |
| CCATAATTGTGTATGATATC+AGG | - | chr5_2:55661761-55661780 | None:intergenic | 30.0% | |
| CCTGATATCATACACAATTA+TGG | + | chr5_2:55661758-55661777 | Msa0776940:CDS | 30.0% | |
| AAACTTATTCAATGAGTCCA+TGG | + | chr5_2:55662129-55662148 | Msa0776940:CDS | 30.0% | |
| ! | TTGTTGATTGAAAAGTGTAG+GGG | + | chr5_2:55662178-55662197 | Msa0776940:CDS | 30.0% |
| GAGAATTTAAACTATGTTGG+TGG | + | chr5_2:55662340-55662359 | Msa0776940:CDS | 30.0% | |
| AAGTCTGAATAAAATTGCAG+TGG | + | chr5_2:55662493-55662512 | Msa0776940:intron | 30.0% | |
| ATAGCAAAGAAAGGTAAAGA+AGG | + | chr5_2:55662576-55662595 | Msa0776940:CDS | 30.0% | |
| TAGCAAAGAAAGGTAAAGAA+GGG | + | chr5_2:55662577-55662596 | Msa0776940:CDS | 30.0% | |
| ! | CTTCTTTGATATGTTGATGA+TGG | + | chr5_2:55662671-55662690 | Msa0776940:CDS | 30.0% |
| ! | TTACTCCAATTTTAGGCTTA+AGG | + | chr5_2:55662772-55662791 | Msa0776940:CDS | 30.0% |
| !! | GCTTTGAGCTTTGAGTAAAT+TGG | - | chr5_2:55661669-55661688 | None:intergenic | 35.0% |
| !! | CATGTTTTTGAAGGGTGAAT+TGG | - | chr5_2:55661821-55661840 | None:intergenic | 35.0% |
| !! | GGATGAAGCATGTTTTTGAA+GGG | - | chr5_2:55661829-55661848 | None:intergenic | 35.0% |
| !! | TGGATGAAGCATGTTTTTGA+AGG | - | chr5_2:55661830-55661849 | None:intergenic | 35.0% |
| ATGCGAATAATGACTCATTC+TGG | + | chr5_2:55661857-55661876 | Msa0776940:CDS | 35.0% | |
| AAGTAGTAATACGGATGCAT+CGG | - | chr5_2:55661939-55661958 | None:intergenic | 35.0% | |
| TGCATCCGTATTACTACTTA+AGG | + | chr5_2:55661940-55661959 | Msa0776940:CDS | 35.0% | |
| !! | TGTGTCGTTTCAAATGTTGT+AGG | - | chr5_2:55662064-55662083 | None:intergenic | 35.0% |
| ! | ACAACATTTGAAACGACACA+CGG | + | chr5_2:55662064-55662083 | Msa0776940:CDS | 35.0% |
| ! | TTTAAATTTAGAGTCACGCG+CGG | - | chr5_2:55662110-55662129 | None:intergenic | 35.0% |
| !! | ATTCAATGGATTGGAGTCAT+TGG | + | chr5_2:55662204-55662223 | Msa0776940:CDS | 35.0% |
| TTGTGGGAATGATTTAGCAA+GGG | - | chr5_2:55662266-55662285 | None:intergenic | 35.0% | |
| TTTGTGGGAATGATTTAGCA+AGG | - | chr5_2:55662267-55662286 | None:intergenic | 35.0% | |
| TGCTAAATCATTCCCACAAA+TGG | + | chr5_2:55662267-55662286 | Msa0776940:CDS | 35.0% | |
| TTCAACAAAATGGCATCTGT+TGG | - | chr5_2:55662386-55662405 | None:intergenic | 35.0% | |
| !!! | AACAGATGCCATTTTGTTGA+AGG | + | chr5_2:55662385-55662404 | Msa0776940:intron | 35.0% |
| AAGGATGCAATAGCAAAGAA+AGG | + | chr5_2:55662567-55662586 | Msa0776940:CDS | 35.0% | |
| AAAGAAAGGTAAAGAAGGGA+AGG | + | chr5_2:55662581-55662600 | Msa0776940:CDS | 35.0% | |
| AAGAGAGAAACGAGAAAGAA+TGG | + | chr5_2:55662709-55662728 | Msa0776940:CDS | 35.0% | |
| !! | ATTAAGTTGATTTCTTCGGC+TGG | + | chr5_2:55662732-55662751 | Msa0776940:CDS | 35.0% |
| AGAGACCTTAAGCCTAAAAT+TGG | - | chr5_2:55662780-55662799 | None:intergenic | 35.0% | |
| !! | GCTTTGAGCTTTGAGTAAAT+TGG | - | chr5_2:55661669-55661688 | None:intergenic | 35.0% |
| !! | CATGTTTTTGAAGGGTGAAT+TGG | - | chr5_2:55661821-55661840 | None:intergenic | 35.0% |
| !! | GGATGAAGCATGTTTTTGAA+GGG | - | chr5_2:55661829-55661848 | None:intergenic | 35.0% |
| !! | TGGATGAAGCATGTTTTTGA+AGG | - | chr5_2:55661830-55661849 | None:intergenic | 35.0% |
| ATGCGAATAATGACTCATTC+TGG | + | chr5_2:55661857-55661876 | Msa0776940:CDS | 35.0% | |
| AAGTAGTAATACGGATGCAT+CGG | - | chr5_2:55661939-55661958 | None:intergenic | 35.0% | |
| TGCATCCGTATTACTACTTA+AGG | + | chr5_2:55661940-55661959 | Msa0776940:CDS | 35.0% | |
| !! | TGTGTCGTTTCAAATGTTGT+AGG | - | chr5_2:55662064-55662083 | None:intergenic | 35.0% |
| ! | ACAACATTTGAAACGACACA+CGG | + | chr5_2:55662064-55662083 | Msa0776940:CDS | 35.0% |
| ! | TTTAAATTTAGAGTCACGCG+CGG | - | chr5_2:55662110-55662129 | None:intergenic | 35.0% |
| !! | ATTCAATGGATTGGAGTCAT+TGG | + | chr5_2:55662204-55662223 | Msa0776940:CDS | 35.0% |
| TTGTGGGAATGATTTAGCAA+GGG | - | chr5_2:55662266-55662285 | None:intergenic | 35.0% | |
| TTTGTGGGAATGATTTAGCA+AGG | - | chr5_2:55662267-55662286 | None:intergenic | 35.0% | |
| TGCTAAATCATTCCCACAAA+TGG | + | chr5_2:55662267-55662286 | Msa0776940:CDS | 35.0% | |
| TTCAACAAAATGGCATCTGT+TGG | - | chr5_2:55662386-55662405 | None:intergenic | 35.0% | |
| !!! | AACAGATGCCATTTTGTTGA+AGG | + | chr5_2:55662385-55662404 | Msa0776940:intron | 35.0% |
| AAGGATGCAATAGCAAAGAA+AGG | + | chr5_2:55662567-55662586 | Msa0776940:CDS | 35.0% | |
| AAAGAAAGGTAAAGAAGGGA+AGG | + | chr5_2:55662581-55662600 | Msa0776940:CDS | 35.0% | |
| AAGAGAGAAACGAGAAAGAA+TGG | + | chr5_2:55662709-55662728 | Msa0776940:CDS | 35.0% | |
| !! | ATTAAGTTGATTTCTTCGGC+TGG | + | chr5_2:55662732-55662751 | Msa0776940:CDS | 35.0% |
| AGAGACCTTAAGCCTAAAAT+TGG | - | chr5_2:55662780-55662799 | None:intergenic | 35.0% | |
| TCAAAGCTCAAAGCCACATA+TGG | + | chr5_2:55661675-55661694 | Msa0776940:CDS | 40.0% | |
| TCATTATTCGCATCAAGCGA+TGG | - | chr5_2:55661850-55661869 | None:intergenic | 40.0% | |
| AAGTAGAGAATTGATGCCAC+GGG | - | chr5_2:55662024-55662043 | None:intergenic | 40.0% | |
| CAAGTAGAGAATTGATGCCA+CGG | - | chr5_2:55662025-55662044 | None:intergenic | 40.0% | |
| ! | CAACATTTGAAACGACACAC+GGG | + | chr5_2:55662065-55662084 | Msa0776940:CDS | 40.0% |
| TAATTGAGCATCACTTGCCA+TGG | - | chr5_2:55662149-55662168 | None:intergenic | 40.0% | |
| !! | AAGTGTAGGGGAGTATTCAA+TGG | + | chr5_2:55662190-55662209 | Msa0776940:CDS | 40.0% |
| !! | TAGGGGAGTATTCAATGGAT+TGG | + | chr5_2:55662195-55662214 | Msa0776940:CDS | 40.0% |
| ! | TTGGAGTCATTGGTTGATGT+TGG | + | chr5_2:55662214-55662233 | Msa0776940:CDS | 40.0% |
| AACAAAATGGCATCTGTTGG+AGG | - | chr5_2:55662383-55662402 | None:intergenic | 40.0% | |
| TGCAGTGGATATTGCATGAT+TGG | + | chr5_2:55662508-55662527 | Msa0776940:intron | 40.0% | |
| GAAGGTGATTGTGATAGACA+TGG | + | chr5_2:55662599-55662618 | Msa0776940:CDS | 40.0% | |
| GATTGTGATAGACATGGTGT+TGG | + | chr5_2:55662605-55662624 | Msa0776940:CDS | 40.0% | |
| ! | ATGGTGTTGGAAAGTGAGAA+GGG | + | chr5_2:55662618-55662637 | Msa0776940:CDS | 40.0% |
| !! | TTGATGATGGTAGTACTCAC+AGG | + | chr5_2:55662684-55662703 | Msa0776940:CDS | 40.0% |
| TCAAAGCTCAAAGCCACATA+TGG | + | chr5_2:55661675-55661694 | Msa0776940:CDS | 40.0% | |
| TCATTATTCGCATCAAGCGA+TGG | - | chr5_2:55661850-55661869 | None:intergenic | 40.0% | |
| AAGTAGAGAATTGATGCCAC+GGG | - | chr5_2:55662024-55662043 | None:intergenic | 40.0% | |
| CAAGTAGAGAATTGATGCCA+CGG | - | chr5_2:55662025-55662044 | None:intergenic | 40.0% | |
| ! | CAACATTTGAAACGACACAC+GGG | + | chr5_2:55662065-55662084 | Msa0776940:CDS | 40.0% |
| TAATTGAGCATCACTTGCCA+TGG | - | chr5_2:55662149-55662168 | None:intergenic | 40.0% | |
| !! | AAGTGTAGGGGAGTATTCAA+TGG | + | chr5_2:55662190-55662209 | Msa0776940:CDS | 40.0% |
| !! | TAGGGGAGTATTCAATGGAT+TGG | + | chr5_2:55662195-55662214 | Msa0776940:CDS | 40.0% |
| ! | TTGGAGTCATTGGTTGATGT+TGG | + | chr5_2:55662214-55662233 | Msa0776940:CDS | 40.0% |
| AACAAAATGGCATCTGTTGG+AGG | - | chr5_2:55662383-55662402 | None:intergenic | 40.0% | |
| TGCAGTGGATATTGCATGAT+TGG | + | chr5_2:55662508-55662527 | Msa0776940:intron | 40.0% | |
| GAAGGTGATTGTGATAGACA+TGG | + | chr5_2:55662599-55662618 | Msa0776940:CDS | 40.0% | |
| GATTGTGATAGACATGGTGT+TGG | + | chr5_2:55662605-55662624 | Msa0776940:CDS | 40.0% | |
| ! | ATGGTGTTGGAAAGTGAGAA+GGG | + | chr5_2:55662618-55662637 | Msa0776940:CDS | 40.0% |
| !! | TTGATGATGGTAGTACTCAC+AGG | + | chr5_2:55662684-55662703 | Msa0776940:CDS | 40.0% |
| !! | ATCCAGTTTTGACAAACCCG+TGG | + | chr5_2:55662005-55662024 | Msa0776940:CDS | 45.0% |
| CGTGGCATCAATTCTCTACT+TGG | + | chr5_2:55662023-55662042 | Msa0776940:CDS | 45.0% | |
| GACACACGGGATGTTGATAT+GGG | + | chr5_2:55662078-55662097 | Msa0776940:CDS | 45.0% | |
| ! | GAGTCATTGGTTGATGTTGG+AGG | + | chr5_2:55662217-55662236 | Msa0776940:CDS | 45.0% |
| ! | TCATTGGTTGATGTTGGAGG+AGG | + | chr5_2:55662220-55662239 | Msa0776940:CDS | 45.0% |
| AGACACTGCACTCCATTTGT+GGG | - | chr5_2:55662282-55662301 | None:intergenic | 45.0% | |
| AAGACACTGCACTCCATTTG+TGG | - | chr5_2:55662283-55662302 | None:intergenic | 45.0% | |
| ! | CATGGTGTTGGAAAGTGAGA+AGG | + | chr5_2:55662617-55662636 | Msa0776940:CDS | 45.0% |
| !! | ATCCAGTTTTGACAAACCCG+TGG | + | chr5_2:55662005-55662024 | Msa0776940:CDS | 45.0% |
| CGTGGCATCAATTCTCTACT+TGG | + | chr5_2:55662023-55662042 | Msa0776940:CDS | 45.0% | |
| GACACACGGGATGTTGATAT+GGG | + | chr5_2:55662078-55662097 | Msa0776940:CDS | 45.0% | |
| ! | GAGTCATTGGTTGATGTTGG+AGG | + | chr5_2:55662217-55662236 | Msa0776940:CDS | 45.0% |
| ! | TCATTGGTTGATGTTGGAGG+AGG | + | chr5_2:55662220-55662239 | Msa0776940:CDS | 45.0% |
| AGACACTGCACTCCATTTGT+GGG | - | chr5_2:55662282-55662301 | None:intergenic | 45.0% | |
| AAGACACTGCACTCCATTTG+TGG | - | chr5_2:55662283-55662302 | None:intergenic | 45.0% | |
| ! | CATGGTGTTGGAAAGTGAGA+AGG | + | chr5_2:55662617-55662636 | Msa0776940:CDS | 45.0% |
| TGCCACGGGTTTGTCAAAAC+TGG | - | chr5_2:55662010-55662029 | None:intergenic | 50.0% | |
| CGACACACGGGATGTTGATA+TGG | + | chr5_2:55662077-55662096 | Msa0776940:CDS | 50.0% | |
| ! | TTGATGTTGGAGGAGGCACA+GGG | + | chr5_2:55662227-55662246 | Msa0776940:CDS | 50.0% |
| GATCTCCCACATGTTGTCGA+TGG | + | chr5_2:55662304-55662323 | Msa0776940:CDS | 50.0% | |
| GCAAGCCATCGACAACATGT+GGG | - | chr5_2:55662312-55662331 | None:intergenic | 50.0% | |
| TGCAAGCCATCGACAACATG+TGG | - | chr5_2:55662313-55662332 | None:intergenic | 50.0% | |
| ! | CATGTTGTCGATGGCTTGCA+AGG | + | chr5_2:55662313-55662332 | Msa0776940:CDS | 50.0% |
| TGCCACGGGTTTGTCAAAAC+TGG | - | chr5_2:55662010-55662029 | None:intergenic | 50.0% | |
| CGACACACGGGATGTTGATA+TGG | + | chr5_2:55662077-55662096 | Msa0776940:CDS | 50.0% | |
| ! | TTGATGTTGGAGGAGGCACA+GGG | + | chr5_2:55662227-55662246 | Msa0776940:CDS | 50.0% |
| GATCTCCCACATGTTGTCGA+TGG | + | chr5_2:55662304-55662323 | Msa0776940:CDS | 50.0% | |
| GCAAGCCATCGACAACATGT+GGG | - | chr5_2:55662312-55662331 | None:intergenic | 50.0% | |
| TGCAAGCCATCGACAACATG+TGG | - | chr5_2:55662313-55662332 | None:intergenic | 50.0% | |
| ! | CATGTTGTCGATGGCTTGCA+AGG | + | chr5_2:55662313-55662332 | Msa0776940:CDS | 50.0% |
| ACGAATGGCGTCACGCTCAT+TGG | - | chr5_2:55661971-55661990 | None:intergenic | 55.0% | |
| ! | TCGAGCATCGCATGCACGAA+TGG | - | chr5_2:55661986-55662005 | None:intergenic | 55.0% |
| ! | GTTGATGTTGGAGGAGGCAC+AGG | + | chr5_2:55662226-55662245 | Msa0776940:CDS | 55.0% |
| TTTAGCAAGGGCCTTTGCCG+TGG | - | chr5_2:55662254-55662273 | None:intergenic | 55.0% | |
| ACGAATGGCGTCACGCTCAT+TGG | - | chr5_2:55661971-55661990 | None:intergenic | 55.0% | |
| ! | TCGAGCATCGCATGCACGAA+TGG | - | chr5_2:55661986-55662005 | None:intergenic | 55.0% |
| ! | GTTGATGTTGGAGGAGGCAC+AGG | + | chr5_2:55662226-55662245 | Msa0776940:CDS | 55.0% |
| TTTAGCAAGGGCCTTTGCCG+TGG | - | chr5_2:55662254-55662273 | None:intergenic | 55.0% | |
| ! | TGGAGGAGGCACAGGGACCA+CGG | + | chr5_2:55662234-55662253 | Msa0776940:CDS | 65.0% |
| AGGCACAGGGACCACGGCAA+AGG | + | chr5_2:55662240-55662259 | Msa0776940:CDS | 65.0% | |
| ! | TGGAGGAGGCACAGGGACCA+CGG | + | chr5_2:55662234-55662253 | Msa0776940:CDS | 65.0% |
| AGGCACAGGGACCACGGCAA+AGG | + | chr5_2:55662240-55662259 | Msa0776940:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 55661632 | 55662818 | 55661632 | ID=Msa0776940;Name=Msa0776940 |
| chr5_2 | mRNA | 55661632 | 55662818 | 55661632 | ID=Msa0776940-mRNA-1;Parent=Msa0776940;Name=Msa0776940-mRNA-1;_AED=0.01;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|357 |
| chr5_2 | exon | 55661632 | 55662399 | 55661632 | ID=Msa0776940-mRNA-1:exon:16429;Parent=Msa0776940-mRNA-1 |
| chr5_2 | exon | 55662513 | 55662818 | 55662513 | ID=Msa0776940-mRNA-1:exon:16430;Parent=Msa0776940-mRNA-1 |
| chr5_2 | CDS | 55661632 | 55662399 | 55661632 | ID=Msa0776940-mRNA-1:cds;Parent=Msa0776940-mRNA-1 |
| chr5_2 | CDS | 55662513 | 55662818 | 55662513 | ID=Msa0776940-mRNA-1:cds;Parent=Msa0776940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
