Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819310 | XP_003615966.1 | 94.722 | 360 | 19 | 0 | 1 | 360 | 1 | 360 | 0.0 | 703 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819310 | sp|B0ZB57|OMT3_HUMLU | 61.111 | 360 | 134 | 3 | 6 | 360 | 19 | 377 | 2.47e-161 | 459 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819310 | G7KFJ3 | 94.722 | 360 | 19 | 0 | 1 | 360 | 1 | 360 | 0.0 | 703 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013270 | Msa0819310 | 0.822625 | 2.142762e-53 | -8.615850e-47 |
| Msa0045810 | Msa0819310 | 0.825838 | 3.767990e-54 | -8.615850e-47 |
| Msa0046200 | Msa0819310 | 0.816383 | 5.689989e-52 | -8.615850e-47 |
| Msa0062190 | Msa0819310 | 0.815753 | 7.866800e-52 | -8.615850e-47 |
| Msa0072180 | Msa0819310 | 0.815063 | 1.119833e-51 | -8.615850e-47 |
| Msa0073110 | Msa0819310 | 0.808308 | 3.300992e-50 | -8.615850e-47 |
| Msa0106540 | Msa0819310 | 0.802676 | 5.009993e-49 | -8.615850e-47 |
| Msa0646010 | Msa0819310 | 0.808618 | 2.835438e-50 | -8.615850e-47 |
| Msa0646440 | Msa0819310 | 0.804722 | 1.884384e-49 | -8.615850e-47 |
| Msa0657710 | Msa0819310 | 0.835757 | 1.393739e-56 | -8.615850e-47 |
| Msa0686040 | Msa0819310 | 0.813330 | 2.703305e-51 | -8.615850e-47 |
| Msa0702800 | Msa0819310 | 0.833145 | 6.310901e-56 | -8.615850e-47 |
| Msa0722890 | Msa0819310 | 0.800099 | 1.689199e-48 | -8.615850e-47 |
| Msa0735010 | Msa0819310 | 0.855425 | 6.363781e-62 | -8.615850e-47 |
| Msa0745140 | Msa0819310 | 0.805384 | 1.369815e-49 | -8.615850e-47 |
| Msa0769910 | Msa0819310 | -0.806432 | 8.251338e-50 | -8.615850e-47 |
| Msa0776640 | Msa0819310 | 0.805397 | 1.361627e-49 | -8.615850e-47 |
| Msa0776940 | Msa0819310 | 0.824114 | 9.619506e-54 | -8.615850e-47 |
| Msa0819310 | Msa0825920 | 0.807469 | 4.978786e-50 | -8.615850e-47 |
| Msa0819310 | Msa0828960 | 0.837358 | 5.449319e-57 | -8.615850e-47 |
| Msa0819310 | Msa0848670 | -0.810876 | 9.270240e-51 | -8.615850e-47 |
| Msa0819310 | Msa0854760 | 0.881907 | 1.623990e-70 | -8.615850e-47 |
| Msa0819310 | Msa0865420 | 0.801018 | 1.097274e-48 | -8.615850e-47 |
| Msa0819310 | Msa0873880 | 0.801061 | 1.075478e-48 | -8.615850e-47 |
| Msa0819310 | Msa0880910 | 0.834941 | 2.239321e-56 | -8.615850e-47 |
| Msa0819310 | Msa0909260 | 0.845758 | 3.324718e-59 | -8.615850e-47 |
| Msa0819310 | Msa0967780 | 0.829133 | 6.104852e-55 | -8.615850e-47 |
| Msa0819310 | Msa0968180 | 0.826176 | 3.131294e-54 | -8.615850e-47 |
| Msa0819310 | Msa1029820 | 0.839460 | 1.564070e-57 | -8.615850e-47 |
| Msa0819310 | Msa1041060 | 0.817476 | 3.233269e-52 | -8.615850e-47 |
| Msa0819310 | Msa1044250 | 0.809674 | 1.683331e-50 | -8.615850e-47 |
| Msa0819310 | Msa1052730 | 0.815797 | 7.688134e-52 | -8.615850e-47 |
| Msa0819310 | Msa1068730 | 0.824922 | 6.206890e-54 | -8.615850e-47 |
| Msa0819310 | Msa1068940 | 0.837098 | 6.350221e-57 | -8.615850e-47 |
| Msa0819310 | Msa1078760 | -0.801399 | 9.172044e-49 | -8.615850e-47 |
| Msa0819310 | Msa1079820 | 0.823096 | 1.664555e-53 | -8.615850e-47 |
| Msa0819310 | Msa1082410 | 0.814994 | 1.160112e-51 | -8.615850e-47 |
| Msa0819310 | Msa1088740 | -0.801365 | 9.317352e-49 | -8.615850e-47 |
| Msa0819310 | Msa1111910 | 0.807028 | 6.172852e-50 | -8.615850e-47 |
| Msa0819310 | Msa1147010 | 0.820643 | 6.153282e-53 | -8.615850e-47 |
| Msa0819310 | Msa1149910 | 0.819633 | 1.048113e-52 | -8.615850e-47 |
| Msa0819310 | Msa1156710 | 0.825507 | 4.514754e-54 | -8.615850e-47 |
| Msa0819310 | Msa1165460 | 0.808456 | 3.069089e-50 | -8.615850e-47 |
| Msa0819310 | Msa1190350 | -0.803280 | 3.758303e-49 | -8.615850e-47 |
| Msa0819310 | Msa1192360 | 0.813854 | 2.072620e-51 | -8.615850e-47 |
| Msa0819310 | Msa1206920 | 0.806025 | 1.004938e-49 | -8.615850e-47 |
| Msa0819310 | Msa1242160 | 0.828389 | 9.237642e-55 | -8.615850e-47 |
| Msa0819310 | Msa1250660 | 0.848251 | 6.903019e-60 | -8.615850e-47 |
| Msa0819310 | Msa1255710 | 0.801137 | 1.037617e-48 | -8.615850e-47 |
| Msa0819310 | Msa1257200 | 0.814685 | 1.358538e-51 | -8.615850e-47 |
| Msa0819310 | Msa1265570 | 0.803917 | 2.772485e-49 | -8.615850e-47 |
| Msa0819310 | Msa1273320 | 0.816782 | 4.629978e-52 | -8.615850e-47 |
| Msa0819310 | Msa1281780 | 0.839826 | 1.255826e-57 | -8.615850e-47 |
| Msa0819310 | Msa1283930 | 0.844174 | 8.902812e-59 | -8.615850e-47 |
| Msa0819310 | Msa1283980 | 0.814587 | 1.427716e-51 | -8.615850e-47 |
| Msa0819310 | Msa1284020 | 0.823959 | 1.045866e-53 | -8.615850e-47 |
| Msa0819310 | Msa1288070 | 0.815935 | 7.162850e-52 | -8.615850e-47 |
| Msa0819310 | Msa1321010 | 0.826405 | 2.762167e-54 | -8.615850e-47 |
| Msa0819310 | Msa1322960 | 0.848025 | 7.972313e-60 | -8.615850e-47 |
| Msa0819310 | Msa1322980 | 0.830004 | 3.747592e-55 | -8.615850e-47 |
| Msa0819310 | Msa1326680 | 0.801353 | 9.370698e-49 | -8.615850e-47 |
| Msa0819310 | Msa1326710 | 0.816405 | 5.625296e-52 | -8.615850e-47 |
| Msa0819310 | Msa1334670 | 0.803475 | 3.425278e-49 | -8.615850e-47 |
| Msa0819310 | Msa1365230 | 0.800338 | 1.510500e-48 | -8.615850e-47 |
| Msa0819310 | Msa1380740 | 0.801594 | 8.366651e-49 | -8.615850e-47 |
| Msa0819310 | Msa1381010 | 0.822441 | 2.364766e-53 | -8.615850e-47 |
| Msa0819310 | Msa1407810 | 0.842150 | 3.083049e-58 | -8.615850e-47 |
| Msa0819310 | Msa1433360 | 0.848012 | 8.034889e-60 | -8.615850e-47 |
| Msa0819310 | Msa1437780 | 0.843576 | 1.287405e-58 | -8.615850e-47 |
| Msa0819310 | Msa1438510 | 0.820382 | 7.063996e-53 | -8.615850e-47 |
| Msa0819310 | Msa1445530 | 0.848360 | 6.440422e-60 | -8.615850e-47 |
| Msa0139500 | Msa0819310 | 0.813706 | 2.234522e-51 | -8.615850e-47 |
| Msa0203880 | Msa0819310 | 0.802265 | 6.090478e-49 | -8.615850e-47 |
| Msa0206370 | Msa0819310 | 0.835890 | 1.289497e-56 | -8.615850e-47 |
| Msa0371350 | Msa0819310 | -0.810043 | 1.402674e-50 | -8.615850e-47 |
| Msa0386560 | Msa0819310 | 0.827126 | 1.858224e-54 | -8.615850e-47 |
| Msa0386880 | Msa0819310 | 0.803153 | 3.993636e-49 | -8.615850e-47 |
| Msa0437480 | Msa0819310 | 0.818638 | 1.766227e-52 | -8.615850e-47 |
| Msa0279090 | Msa0819310 | -0.803671 | 3.118534e-49 | -8.615850e-47 |
| Msa0279810 | Msa0819310 | 0.806773 | 6.990340e-50 | -8.615850e-47 |
| Msa0282830 | Msa0819310 | 0.807014 | 6.214845e-50 | -8.615850e-47 |
| Msa0319220 | Msa0819310 | 0.802617 | 5.153412e-49 | -8.615850e-47 |
| Msa0333770 | Msa0819310 | 0.813481 | 2.504197e-51 | -8.615850e-47 |
| Msa0336460 | Msa0819310 | 0.808480 | 3.033733e-50 | -8.615850e-47 |
| Msa0354840 | Msa0819310 | 0.811184 | 7.947958e-51 | -8.615850e-47 |
| Msa0523550 | Msa0819310 | 0.824484 | 7.871778e-54 | -8.615850e-47 |
| Msa0540640 | Msa0819310 | 0.818073 | 2.371278e-52 | -8.615850e-47 |
| Msa0567330 | Msa0819310 | 0.844464 | 7.437044e-59 | -8.615850e-47 |
| Msa0567570 | Msa0819310 | 0.828791 | 7.387439e-55 | -8.615850e-47 |
| Msa0576320 | Msa0819310 | 0.834098 | 3.647095e-56 | -8.615850e-47 |
| Msa0596600 | Msa0819310 | 0.802141 | 6.457319e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819310 | MtrunA17_Chr5g0432241 | 94.722 | 360 | 19 | 0 | 1 | 360 | 1 | 360 | 0.0 | 703 |
| Msa0819310 | MtrunA17_Chr5g0432301 | 84.401 | 359 | 56 | 0 | 1 | 359 | 1 | 359 | 0.0 | 637 |
| Msa0819310 | MtrunA17_Chr5g0432251 | 81.944 | 360 | 64 | 1 | 1 | 360 | 1 | 359 | 0.0 | 610 |
| Msa0819310 | MtrunA17_Chr5g0432211 | 76.667 | 360 | 69 | 2 | 1 | 360 | 1 | 345 | 0.0 | 563 |
| Msa0819310 | MtrunA17_Chr5g0432261 | 73.889 | 360 | 61 | 3 | 1 | 360 | 1 | 327 | 0.0 | 532 |
| Msa0819310 | MtrunA17_Chr4g0040621 | 63.158 | 361 | 126 | 5 | 1 | 360 | 15 | 369 | 4.84e-164 | 463 |
| Msa0819310 | MtrunA17_Chr4g0014681 | 49.180 | 366 | 177 | 6 | 1 | 360 | 1 | 363 | 1.07e-112 | 332 |
| Msa0819310 | MtrunA17_Chr4g0046361 | 46.176 | 353 | 184 | 5 | 12 | 360 | 11 | 361 | 3.54e-112 | 331 |
| Msa0819310 | MtrunA17_Chr4g0014561 | 48.634 | 366 | 179 | 6 | 1 | 360 | 1 | 363 | 8.78e-111 | 327 |
| Msa0819310 | MtrunA17_Chr7g0219141 | 46.591 | 352 | 180 | 5 | 12 | 360 | 11 | 357 | 1.67e-109 | 324 |
| Msa0819310 | MtrunA17_Chr1g0188391 | 45.479 | 365 | 190 | 7 | 1 | 360 | 1 | 361 | 9.88e-108 | 320 |
| Msa0819310 | MtrunA17_Chr4g0014641 | 47.802 | 364 | 179 | 6 | 3 | 360 | 5 | 363 | 2.87e-107 | 318 |
| Msa0819310 | MtrunA17_Chr4g0046341 | 47.472 | 356 | 178 | 5 | 12 | 360 | 11 | 364 | 9.69e-107 | 317 |
| Msa0819310 | MtrunA17_Chr7g0219161 | 46.921 | 341 | 173 | 5 | 11 | 348 | 10 | 345 | 5.35e-105 | 313 |
| Msa0819310 | MtrunA17_Chr7g0223241 | 45.251 | 358 | 186 | 5 | 1 | 358 | 1 | 348 | 4.28e-104 | 310 |
| Msa0819310 | MtrunA17_Chr7g0223231 | 43.855 | 358 | 191 | 5 | 1 | 358 | 1 | 348 | 1.24e-103 | 309 |
| Msa0819310 | MtrunA17_Chr4g0046531 | 43.855 | 358 | 196 | 4 | 3 | 359 | 2 | 355 | 5.07e-96 | 300 |
| Msa0819310 | MtrunA17_Chr4g0046531 | 43.454 | 359 | 198 | 4 | 3 | 360 | 364 | 718 | 8.81e-96 | 300 |
| Msa0819310 | MtrunA17_Chr4g0014661 | 45.304 | 362 | 187 | 6 | 2 | 360 | 4 | 357 | 1.13e-93 | 283 |
| Msa0819310 | MtrunA17_Chr1g0188371 | 42.604 | 338 | 189 | 4 | 6 | 340 | 5 | 340 | 2.96e-90 | 275 |
| Msa0819310 | MtrunA17_Chr4g0014591 | 43.923 | 362 | 192 | 6 | 2 | 360 | 4 | 357 | 1.58e-89 | 273 |
| Msa0819310 | MtrunA17_Chr3g0121301 | 37.389 | 337 | 204 | 4 | 21 | 356 | 27 | 357 | 1.24e-76 | 240 |
| Msa0819310 | MtrunA17_Chr4g0021981 | 39.143 | 350 | 203 | 7 | 15 | 360 | 25 | 368 | 1.42e-75 | 238 |
| Msa0819310 | MtrunA17_Chr4g0022021 | 38.857 | 350 | 204 | 6 | 15 | 360 | 25 | 368 | 7.99e-72 | 228 |
| Msa0819310 | MtrunA17_Chr4g0014601 | 40.377 | 265 | 148 | 5 | 1 | 262 | 3 | 260 | 1.83e-62 | 200 |
| Msa0819310 | MtrunA17_Chr7g0276401 | 33.333 | 333 | 202 | 11 | 32 | 355 | 47 | 368 | 1.11e-48 | 168 |
| Msa0819310 | MtrunA17_Chr7g0276411 | 31.804 | 327 | 202 | 11 | 31 | 345 | 30 | 347 | 1.86e-46 | 162 |
| Msa0819310 | MtrunA17_Chr8g0367441 | 31.420 | 331 | 188 | 7 | 32 | 341 | 46 | 358 | 1.91e-46 | 162 |
| Msa0819310 | MtrunA17_Chr7g0219171 | 55.970 | 134 | 57 | 2 | 227 | 360 | 117 | 248 | 3.19e-46 | 158 |
| Msa0819310 | MtrunA17_Chr7g0219171 | 46.364 | 110 | 55 | 2 | 12 | 121 | 11 | 116 | 3.89e-22 | 94.0 |
| Msa0819310 | MtrunA17_Chr3g0128011 | 30.864 | 324 | 207 | 9 | 32 | 346 | 88 | 403 | 2.44e-45 | 160 |
| Msa0819310 | MtrunA17_Chr5g0448091 | 30.275 | 327 | 208 | 9 | 32 | 347 | 33 | 350 | 2.35e-44 | 156 |
| Msa0819310 | MtrunA17_Chr8g0345851 | 35.714 | 266 | 157 | 7 | 99 | 359 | 33 | 289 | 1.85e-43 | 152 |
| Msa0819310 | MtrunA17_Chr8g0367501 | 28.852 | 357 | 195 | 8 | 20 | 345 | 20 | 348 | 2.34e-43 | 155 |
| Msa0819310 | MtrunA17_Chr8g0367491 | 28.933 | 356 | 192 | 7 | 24 | 345 | 33 | 361 | 3.85e-43 | 153 |
| Msa0819310 | MtrunA17_Chr8g0367451 | 31.132 | 318 | 206 | 7 | 32 | 341 | 45 | 357 | 1.32e-42 | 152 |
| Msa0819310 | MtrunA17_Chr1g0200491 | 28.614 | 332 | 219 | 7 | 27 | 347 | 34 | 358 | 4.52e-41 | 148 |
| Msa0819310 | MtrunA17_Chr1g0163611 | 29.659 | 381 | 218 | 11 | 5 | 359 | 13 | 369 | 3.74e-40 | 145 |
| Msa0819310 | MtrunA17_Chr1g0163601 | 29.319 | 382 | 234 | 12 | 1 | 359 | 1 | 369 | 9.84e-40 | 144 |
| Msa0819310 | MtrunA17_Chr3g0085201 | 29.692 | 357 | 225 | 11 | 1 | 346 | 1 | 342 | 4.41e-39 | 142 |
| Msa0819310 | MtrunA17_Chr7g0218301 | 28.814 | 354 | 213 | 11 | 27 | 355 | 34 | 373 | 5.16e-39 | 142 |
| Msa0819310 | MtrunA17_Chr7g0218261 | 28.739 | 341 | 224 | 9 | 27 | 355 | 33 | 366 | 1.66e-38 | 141 |
| Msa0819310 | MtrunA17_Chr7g0218271 | 29.730 | 296 | 183 | 8 | 74 | 355 | 89 | 373 | 2.42e-38 | 140 |
| Msa0819310 | MtrunA17_Chr2g0307521 | 27.139 | 339 | 223 | 10 | 34 | 359 | 35 | 362 | 5.77e-38 | 139 |
| Msa0819310 | MtrunA17_Chr3g0085211 | 31.250 | 320 | 208 | 8 | 34 | 347 | 43 | 356 | 1.52e-37 | 138 |
| Msa0819310 | MtrunA17_Chr8g0367381 | 38.043 | 184 | 104 | 5 | 147 | 327 | 149 | 325 | 1.55e-36 | 134 |
| Msa0819310 | MtrunA17_Chr7g0218181 | 30.204 | 245 | 165 | 4 | 116 | 359 | 127 | 366 | 2.53e-36 | 135 |
| Msa0819310 | MtrunA17_Chr1g0163621 | 37.198 | 207 | 123 | 4 | 141 | 347 | 170 | 369 | 3.03e-36 | 135 |
| Msa0819310 | MtrunA17_Chr7g0218131 | 27.134 | 328 | 227 | 7 | 27 | 347 | 34 | 356 | 1.04e-35 | 133 |
| Msa0819310 | MtrunA17_Chr7g0218211 | 27.114 | 343 | 233 | 9 | 27 | 359 | 33 | 368 | 4.69e-35 | 132 |
| Msa0819310 | MtrunA17_Chr2g0314271 | 29.907 | 321 | 210 | 8 | 32 | 345 | 27 | 339 | 1.12e-32 | 125 |
| Msa0819310 | MtrunA17_Chr3g0130061 | 27.429 | 350 | 234 | 11 | 8 | 345 | 2 | 343 | 1.11e-29 | 117 |
| Msa0819310 | MtrunA17_Chr3g0130011 | 27.714 | 350 | 233 | 12 | 8 | 345 | 2 | 343 | 4.19e-29 | 115 |
| Msa0819310 | MtrunA17_Chr6g0482291 | 32.571 | 175 | 102 | 6 | 173 | 345 | 1 | 161 | 1.32e-21 | 90.9 |
| Msa0819310 | MtrunA17_Chr8g0367401 | 38.182 | 110 | 67 | 1 | 150 | 259 | 2 | 110 | 2.26e-21 | 89.0 |
| Msa0819310 | MtrunA17_Chr4g0014611 | 57.426 | 101 | 42 | 1 | 260 | 360 | 8 | 107 | 4.84e-21 | 87.0 |
| Msa0819310 | MtrunA17_Chr8g0367461 | 44.330 | 97 | 51 | 1 | 246 | 342 | 1 | 94 | 6.18e-20 | 84.3 |
| Msa0819310 | MtrunA17_Chr4g0014671 | 56.604 | 106 | 45 | 1 | 255 | 360 | 30 | 134 | 2.63e-18 | 80.5 |
| Msa0819310 | MtrunA17_Chr4g0011691 | 42.268 | 97 | 51 | 4 | 261 | 356 | 140 | 232 | 1.17e-13 | 69.7 |
| Msa0819310 | MtrunA17_Chr8g0367391 | 44.706 | 85 | 40 | 4 | 259 | 341 | 36 | 115 | 2.58e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0819310 | AT4G35160.1 | 34.771 | 371 | 221 | 9 | 4 | 359 | 16 | 380 | 3.35e-64 | 209 |
| Msa0819310 | AT4G35150.1 | 33.699 | 365 | 190 | 9 | 4 | 359 | 2 | 323 | 2.39e-60 | 197 |
| Msa0819310 | AT5G54160.1 | 31.562 | 320 | 208 | 8 | 32 | 346 | 34 | 347 | 2.04e-47 | 164 |
| Msa0819310 | AT1G51990.2 | 33.553 | 304 | 190 | 7 | 63 | 360 | 65 | 362 | 1.31e-46 | 162 |
| Msa0819310 | AT1G51990.1 | 33.553 | 304 | 190 | 7 | 63 | 360 | 65 | 362 | 1.52e-46 | 162 |
| Msa0819310 | AT1G33030.1 | 33.333 | 324 | 199 | 11 | 32 | 346 | 21 | 336 | 1.10e-41 | 149 |
| Msa0819310 | AT1G77520.1 | 28.533 | 375 | 237 | 10 | 2 | 359 | 20 | 380 | 9.34e-41 | 147 |
| Msa0819310 | AT3G53140.1 | 30.887 | 327 | 204 | 10 | 32 | 345 | 27 | 344 | 2.71e-38 | 140 |
| Msa0819310 | AT5G53810.1 | 32.184 | 348 | 210 | 13 | 30 | 359 | 38 | 377 | 2.23e-37 | 138 |
| Msa0819310 | AT1G77530.1 | 30.831 | 373 | 231 | 11 | 2 | 359 | 20 | 380 | 2.00e-34 | 130 |
| Msa0819310 | AT1G63140.2 | 29.759 | 373 | 235 | 11 | 2 | 359 | 20 | 380 | 5.40e-34 | 129 |
| Msa0819310 | AT1G63140.4 | 29.759 | 373 | 235 | 11 | 2 | 359 | 40 | 400 | 6.68e-34 | 129 |
| Msa0819310 | AT1G21130.1 | 28.485 | 330 | 209 | 9 | 32 | 345 | 40 | 358 | 2.67e-33 | 127 |
| Msa0819310 | AT5G37170.2 | 33.333 | 213 | 130 | 7 | 151 | 359 | 29 | 233 | 1.12e-30 | 117 |
| Msa0819310 | AT1G21100.1 | 27.190 | 331 | 214 | 9 | 32 | 346 | 40 | 359 | 3.10e-30 | 119 |
| Msa0819310 | AT5G37170.1 | 33.333 | 213 | 130 | 7 | 151 | 359 | 129 | 333 | 4.11e-30 | 118 |
| Msa0819310 | AT1G21110.1 | 27.217 | 327 | 211 | 9 | 32 | 342 | 40 | 355 | 6.83e-30 | 118 |
| Msa0819310 | AT1G21120.1 | 27.273 | 330 | 213 | 9 | 32 | 345 | 40 | 358 | 9.83e-30 | 117 |
| Msa0819310 | AT1G21120.2 | 27.190 | 331 | 214 | 9 | 32 | 346 | 88 | 407 | 2.07e-29 | 117 |
| Msa0819310 | AT1G62900.1 | 36.058 | 208 | 128 | 3 | 153 | 359 | 1 | 204 | 2.23e-29 | 112 |
| Msa0819310 | AT1G76790.1 | 27.190 | 331 | 206 | 10 | 32 | 341 | 30 | 346 | 1.49e-26 | 108 |
| Msa0819310 | AT5G37170.3 | 34.946 | 186 | 109 | 6 | 181 | 359 | 5 | 185 | 2.34e-26 | 104 |
| Msa0819310 | AT1G33030.2 | 29.787 | 235 | 155 | 7 | 32 | 259 | 21 | 252 | 3.31e-19 | 86.7 |
| Msa0819310 | AT1G33030.3 | 29.787 | 235 | 155 | 7 | 32 | 259 | 21 | 252 | 6.01e-19 | 86.3 |
| Msa0819310 | AT1G63140.1 | 26.838 | 272 | 176 | 9 | 2 | 259 | 40 | 302 | 1.00e-14 | 74.3 |
| Msa0819310 | AT1G21130.2 | 25.726 | 241 | 160 | 5 | 32 | 259 | 40 | 274 | 7.76e-12 | 65.9 |
Find 69 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACATTCTCTTCATTATTT+TGG | 0.038167 | 5_3:+55647275 | None:intergenic |
| ATTGAATAAATTGCTAAATT+TGG | 0.100203 | 5_3:+55646796 | None:intergenic |
| CTTAAATGTGTTGTTGATTT+AGG | 0.154523 | 5_3:-55647184 | Msa0819310:CDS |
| AGAGACCTTAAGCCTAAAAT+TGG | 0.252210 | 5_3:+55645679 | None:intergenic |
| CCATAATTGTGTATGATATC+AGG | 0.254841 | 5_3:+55647157 | None:intergenic |
| CGACACATGGGATGTTGTTA+TGG | 0.282526 | 5_3:-55646838 | Msa0819310:CDS |
| CCTGATATCATACACAATTA+TGG | 0.284388 | 5_3:-55647157 | Msa0819310:CDS |
| ATGCGAATAATGACTCATTC+TGG | 0.312409 | 5_3:-55647058 | Msa0819310:CDS |
| CGTGGCATCAATTCTCTACT+TGG | 0.332951 | 5_3:-55646892 | Msa0819310:CDS |
| ATTGTCCTTAAGTAGTAATA+TGG | 0.361085 | 5_3:+55646970 | None:intergenic |
| GCTTTGAGCTTTGAGTAAAT+TGG | 0.373576 | 5_3:+55647249 | None:intergenic |
| TGCAGTGGATATTGCATGAT+TGG | 0.384572 | 5_3:-55645948 | Msa0819310:intron |
| GATCTACCACATGTTGTTGA+TGG | 0.385028 | 5_3:-55646611 | Msa0819310:CDS |
| TGCCACGGATTTGTCAAAAC+TGG | 0.388454 | 5_3:+55646908 | None:intergenic |
| TGCTAAATCATTCCCACAAA+TGG | 0.411413 | 5_3:-55646648 | Msa0819310:CDS |
| ACCAATTTGTTGATTGAAAA+GGG | 0.417931 | 5_3:-55646743 | Msa0819310:CDS |
| GACCAATTTGTTGATTGAAA+AGG | 0.420504 | 5_3:-55646744 | Msa0819310:CDS |
| ATTCAATGGATTGGAGTCAT+TGG | 0.421743 | 5_3:-55646711 | Msa0819310:CDS |
| TCAAAGCTCAAAGCCACATA+TGG | 0.423149 | 5_3:-55647240 | Msa0819310:CDS |
| AAGAGAGAAACGAGAAAGAA+TGG | 0.424421 | 5_3:-55645747 | Msa0819310:CDS |
| TTGGAGTCATTGGTTGATGT+TGG | 0.427653 | 5_3:-55646701 | Msa0819310:CDS |
| GTTGATGTTGGAGGAGGCAC+GGG | 0.429653 | 5_3:-55646689 | Msa0819310:CDS |
| AACAAAATGGCGTCTGTTGG+AGG | 0.433773 | 5_3:+55646533 | None:intergenic |
| GACACATGGGATGTTGTTAT+GGG | 0.436840 | 5_3:-55646837 | Msa0819310:CDS |
| TGCATCCATATTACTACTTA+AGG | 0.438484 | 5_3:-55646975 | Msa0819310:CDS |
| ACGAAAGGTGTCACGCTCAT+TGG | 0.460563 | 5_3:+55646947 | None:intergenic |
| CTTCTTTGATATGTTGATGA+TGG | 0.474685 | 5_3:-55645785 | Msa0819310:CDS |
| ATTTGTTGATTGAAAAGGGC+AGG | 0.474833 | 5_3:-55646739 | Msa0819310:CDS |
| AATACACTAAACTCCATTTG+TGG | 0.483372 | 5_3:+55646635 | None:intergenic |
| ATTAAGTTGATTTCTTCAGC+TGG | 0.488945 | 5_3:-55645724 | Msa0819310:CDS |
| ATACACTAAACTCCATTTGT+GGG | 0.494527 | 5_3:+55646636 | None:intergenic |
| AGGCACGGGGACCATGGCAA+AGG | 0.495595 | 5_3:-55646675 | Msa0819310:CDS |
| CAATTTATTCAATGAGTCCA+TGG | 0.500941 | 5_3:-55646786 | Msa0819310:CDS |
| TGAAAATGTGATTCCATATG+TGG | 0.508708 | 5_3:+55647227 | None:intergenic |
| ATAGCAAAGAAAGGTAAAGA+AGG | 0.509576 | 5_3:-55645880 | Msa0819310:CDS |
| CAGGGGAGTATTCAATGGAT+TGG | 0.517015 | 5_3:-55646720 | Msa0819310:CDS |
| TTCAACAAAATGGCGTCTGT+TGG | 0.520911 | 5_3:+55646530 | None:intergenic |
| GGTTGATGTTGGAGGAGGCA+CGG | 0.521854 | 5_3:-55646690 | Msa0819310:CDS |
| AAAGAAAGGTAAAGAAGGGA+AGG | 0.534278 | 5_3:-55645875 | Msa0819310:CDS |
| AAGGGCAGGGGAGTATTCAA+TGG | 0.534551 | 5_3:-55646725 | Msa0819310:CDS |
| TGGAGGAGGCACGGGGACCA+TGG | 0.537840 | 5_3:-55646681 | Msa0819310:CDS |
| TCGAGCATCGCGTGCACGAA+AGG | 0.542137 | 5_3:+55646932 | None:intergenic |
| CATGTTGTTGATGGCTTGCA+AGG | 0.546922 | 5_3:-55646602 | Msa0819310:CDS |
| GAGAATCTAAACTATGTTGG+TGG | 0.550202 | 5_3:-55646575 | Msa0819310:CDS |
| GAGTCATTGGTTGATGTTGG+AGG | 0.554899 | 5_3:-55646698 | Msa0819310:CDS |
| ATGGTGTTGGAAAGTGAGAA+GGG | 0.555376 | 5_3:-55645838 | Msa0819310:CDS |
| AGTGAGAATCTAAACTATGT+TGG | 0.555667 | 5_3:-55646578 | Msa0819310:CDS |
| TCATTGGTTGATGTTGGAGG+AGG | 0.559528 | 5_3:-55646695 | Msa0819310:CDS |
| CATGGTGTTGGAAAGTGAGA+AGG | 0.565194 | 5_3:-55645839 | Msa0819310:CDS |
| CCCATGTGTCGTTTCAAATG+TGG | 0.565614 | 5_3:+55646850 | None:intergenic |
| TTGATGATGGTAGTACTCAC+AGG | 0.567324 | 5_3:-55645772 | Msa0819310:CDS |
| TTTAGCAAGGGCCTTTGCCA+TGG | 0.572788 | 5_3:+55646664 | None:intergenic |
| AACAACACATTTAAGTGACA+TGG | 0.577803 | 5_3:+55647192 | None:intergenic |
| AAGGATGCAATAGCAAAGAA+AGG | 0.578531 | 5_3:-55645889 | Msa0819310:CDS |
| ACCACATTTGAAACGACACA+TGG | 0.581603 | 5_3:-55646851 | Msa0819310:CDS |
| TAGCAAAGAAAGGTAAAGAA+GGG | 0.583690 | 5_3:-55645879 | Msa0819310:CDS |
| CTTCTCTCAACATAATGTCA+CGG | 0.583728 | 5_3:-55647032 | Msa0819310:CDS |
| TCATTATTCGCATCAAGCGA+TGG | 0.586198 | 5_3:+55647068 | None:intergenic |
| TTGTTGATTGAAAAGGGCAG+GGG | 0.586763 | 5_3:-55646737 | Msa0819310:CDS |
| TTTGTGGGAATGATTTAGCA+AGG | 0.587728 | 5_3:+55646651 | None:intergenic |
| TTGTGGGAATGATTTAGCAA+GGG | 0.591958 | 5_3:+55646652 | None:intergenic |
| TTTGTTGATTGAAAAGGGCA+GGG | 0.593541 | 5_3:-55646738 | Msa0819310:CDS |
| GATTGTGATAGACATGGTGT+TGG | 0.599108 | 5_3:-55645851 | Msa0819310:CDS |
| TAATCGAGTATCACTTGCCA+TGG | 0.612877 | 5_3:+55646769 | None:intergenic |
| CAAGTAGAGAATTGATGCCA+CGG | 0.622392 | 5_3:+55646893 | None:intergenic |
| TTGATGTTGGAGGAGGCACG+GGG | 0.654011 | 5_3:-55646688 | Msa0819310:CDS |
| TGCAAGCCATCAACAACATG+TGG | 0.655269 | 5_3:+55646605 | None:intergenic |
| CCACATTTGAAACGACACAT+GGG | 0.684220 | 5_3:-55646850 | Msa0819310:CDS |
| GAAGGTGATTGTGATAGACA+TGG | 0.741542 | 5_3:-55645857 | Msa0819310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAATAAATTGCTAAATT+TGG | + | chr5_3:55646150-55646169 | None:intergenic | 15.0% |
| !! | TAAATATATATCACTTGAAT+TGG | - | chr5_3:55646459-55646478 | Msa0819310:intron | 15.0% |
| !!! | TTTTTTGAAGAAGTTAAATT+AGG | + | chr5_3:55646577-55646596 | None:intergenic | 15.0% |
| !! | GTTGATATATACTATAATAA+GGG | - | chr5_3:55646783-55646802 | Msa0819310:CDS | 15.0% |
| !! | ATGAATGTGTAAAAATATTA+AGG | - | chr5_3:55647025-55647044 | Msa0819310:CDS | 15.0% |
| !! | AAAAATATTAAGGAATTGTA+AGG | - | chr5_3:55647035-55647054 | Msa0819310:CDS | 15.0% |
| !! | ATTGAATAAATTGCTAAATT+TGG | + | chr5_3:55646150-55646169 | None:intergenic | 15.0% |
| !! | TAAATATATATCACTTGAAT+TGG | - | chr5_3:55646459-55646478 | Msa0819310:intron | 15.0% |
| !!! | TTTTTTGAAGAAGTTAAATT+AGG | + | chr5_3:55646577-55646596 | None:intergenic | 15.0% |
| !! | GTTGATATATACTATAATAA+GGG | - | chr5_3:55646783-55646802 | Msa0819310:CDS | 15.0% |
| !! | ATGAATGTGTAAAAATATTA+AGG | - | chr5_3:55647025-55647044 | Msa0819310:CDS | 15.0% |
| !! | AAAAATATTAAGGAATTGTA+AGG | - | chr5_3:55647035-55647054 | Msa0819310:CDS | 15.0% |
| !!! | AACATTCTCTTCATTATTTT+GGG | + | chr5_3:55645670-55645689 | None:intergenic | 20.0% |
| !!! | GGTTGATATATACTATAATA+AGG | - | chr5_3:55646782-55646801 | Msa0819310:CDS | 20.0% |
| !! | ATGACACTATAATATAGTTT+AGG | - | chr5_3:55646829-55646848 | Msa0819310:CDS | 20.0% |
| !! | TGACACTATAATATAGTTTA+GGG | - | chr5_3:55646830-55646849 | Msa0819310:CDS | 20.0% |
| !!! | AACATTCTCTTCATTATTTT+GGG | + | chr5_3:55645670-55645689 | None:intergenic | 20.0% |
| !!! | GGTTGATATATACTATAATA+AGG | - | chr5_3:55646782-55646801 | Msa0819310:CDS | 20.0% |
| !! | ATGACACTATAATATAGTTT+AGG | - | chr5_3:55646829-55646848 | Msa0819310:CDS | 20.0% |
| !! | TGACACTATAATATAGTTTA+GGG | - | chr5_3:55646830-55646849 | Msa0819310:CDS | 20.0% |
| !! | CAACATTCTCTTCATTATTT+TGG | + | chr5_3:55645671-55645690 | None:intergenic | 25.0% |
| !!! | CTTAAATGTGTTGTTGATTT+AGG | - | chr5_3:55645759-55645778 | Msa0819310:CDS | 25.0% |
| !!! | AATAAGTTTTGAGAGTGATA+TGG | + | chr5_3:55645817-55645836 | None:intergenic | 25.0% |
| ! | ATTGTCCTTAAGTAGTAATA+TGG | + | chr5_3:55645976-55645995 | None:intergenic | 25.0% |
| !!! | ACCAATTTGTTGATTGAAAA+GGG | - | chr5_3:55646200-55646219 | Msa0819310:intron | 25.0% |
| !! | ACATTTTACCTTCAACAAAA+TGG | + | chr5_3:55646426-55646445 | None:intergenic | 25.0% |
| ! | AAATCAAATATGAGACTTTG+AGG | + | chr5_3:55646523-55646542 | None:intergenic | 25.0% |
| ! | AGTGAAATTAAGACAAAATG+AGG | + | chr5_3:55646916-55646935 | None:intergenic | 25.0% |
| !! | TACAAGATTACTCCAATTTT+AGG | - | chr5_3:55647252-55647271 | Msa0819310:CDS | 25.0% |
| !! | CAACATTCTCTTCATTATTT+TGG | + | chr5_3:55645671-55645690 | None:intergenic | 25.0% |
| !!! | CTTAAATGTGTTGTTGATTT+AGG | - | chr5_3:55645759-55645778 | Msa0819310:CDS | 25.0% |
| !!! | AATAAGTTTTGAGAGTGATA+TGG | + | chr5_3:55645817-55645836 | None:intergenic | 25.0% |
| ! | ATTGTCCTTAAGTAGTAATA+TGG | + | chr5_3:55645976-55645995 | None:intergenic | 25.0% |
| !!! | ACCAATTTGTTGATTGAAAA+GGG | - | chr5_3:55646200-55646219 | Msa0819310:intron | 25.0% |
| !! | ACATTTTACCTTCAACAAAA+TGG | + | chr5_3:55646426-55646445 | None:intergenic | 25.0% |
| ! | AAATCAAATATGAGACTTTG+AGG | + | chr5_3:55646523-55646542 | None:intergenic | 25.0% |
| ! | AGTGAAATTAAGACAAAATG+AGG | + | chr5_3:55646916-55646935 | None:intergenic | 25.0% |
| !! | TACAAGATTACTCCAATTTT+AGG | - | chr5_3:55647252-55647271 | Msa0819310:CDS | 25.0% |
| TGAAAATGTGATTCCATATG+TGG | + | chr5_3:55645719-55645738 | None:intergenic | 30.0% | |
| AACAACACATTTAAGTGACA+TGG | + | chr5_3:55645754-55645773 | None:intergenic | 30.0% | |
| CCATAATTGTGTATGATATC+AGG | + | chr5_3:55645789-55645808 | None:intergenic | 30.0% | |
| CCTGATATCATACACAATTA+TGG | - | chr5_3:55645786-55645805 | Msa0819310:CDS | 30.0% | |
| TGCATCCATATTACTACTTA+AGG | - | chr5_3:55645968-55645987 | Msa0819310:intron | 30.0% | |
| CAATTTATTCAATGAGTCCA+TGG | - | chr5_3:55646157-55646176 | Msa0819310:intron | 30.0% | |
| !! | GACCAATTTGTTGATTGAAA+AGG | - | chr5_3:55646199-55646218 | Msa0819310:intron | 30.0% |
| ATACACTAAACTCCATTTGT+GGG | + | chr5_3:55646310-55646329 | None:intergenic | 30.0% | |
| AATACACTAAACTCCATTTG+TGG | + | chr5_3:55646311-55646330 | None:intergenic | 30.0% | |
| AGTGAGAATCTAAACTATGT+TGG | - | chr5_3:55646365-55646384 | Msa0819310:intron | 30.0% | |
| ATTAGGTCACCCAAATTAAT+TGG | + | chr5_3:55646560-55646579 | None:intergenic | 30.0% | |
| CCTCTTTATCAATTTCACAT+TGG | + | chr5_3:55646764-55646783 | None:intergenic | 30.0% | |
| CCAATGTGAAATTGATAAAG+AGG | - | chr5_3:55646761-55646780 | Msa0819310:CDS | 30.0% | |
| CAGTTATTGGTATCAGAAAA+TGG | + | chr5_3:55646874-55646893 | None:intergenic | 30.0% | |
| ! | CATTTTCTGATACCAATAAC+TGG | - | chr5_3:55646872-55646891 | Msa0819310:CDS | 30.0% |
| !! | TGAGGAGAGTATTATATGAT+CGG | + | chr5_3:55646898-55646917 | None:intergenic | 30.0% |
| AAGTCTGAATAAAATTGCAG+TGG | - | chr5_3:55646980-55646999 | Msa0819310:CDS | 30.0% | |
| ATAGCAAAGAAAGGTAAAGA+AGG | - | chr5_3:55647063-55647082 | Msa0819310:CDS | 30.0% | |
| TAGCAAAGAAAGGTAAAGAA+GGG | - | chr5_3:55647064-55647083 | Msa0819310:CDS | 30.0% | |
| ! | CTTCTTTGATATGTTGATGA+TGG | - | chr5_3:55647158-55647177 | Msa0819310:CDS | 30.0% |
| !! | ATTAAGTTGATTTCTTCAGC+TGG | - | chr5_3:55647219-55647238 | Msa0819310:CDS | 30.0% |
| ! | TTACTCCAATTTTAGGCTTA+AGG | - | chr5_3:55647259-55647278 | Msa0819310:CDS | 30.0% |
| TGAAAATGTGATTCCATATG+TGG | + | chr5_3:55645719-55645738 | None:intergenic | 30.0% | |
| AACAACACATTTAAGTGACA+TGG | + | chr5_3:55645754-55645773 | None:intergenic | 30.0% | |
| CCATAATTGTGTATGATATC+AGG | + | chr5_3:55645789-55645808 | None:intergenic | 30.0% | |
| CCTGATATCATACACAATTA+TGG | - | chr5_3:55645786-55645805 | Msa0819310:CDS | 30.0% | |
| TGCATCCATATTACTACTTA+AGG | - | chr5_3:55645968-55645987 | Msa0819310:intron | 30.0% | |
| CAATTTATTCAATGAGTCCA+TGG | - | chr5_3:55646157-55646176 | Msa0819310:intron | 30.0% | |
| !! | GACCAATTTGTTGATTGAAA+AGG | - | chr5_3:55646199-55646218 | Msa0819310:intron | 30.0% |
| ATACACTAAACTCCATTTGT+GGG | + | chr5_3:55646310-55646329 | None:intergenic | 30.0% | |
| AATACACTAAACTCCATTTG+TGG | + | chr5_3:55646311-55646330 | None:intergenic | 30.0% | |
| AGTGAGAATCTAAACTATGT+TGG | - | chr5_3:55646365-55646384 | Msa0819310:intron | 30.0% | |
| ATTAGGTCACCCAAATTAAT+TGG | + | chr5_3:55646560-55646579 | None:intergenic | 30.0% | |
| CCTCTTTATCAATTTCACAT+TGG | + | chr5_3:55646764-55646783 | None:intergenic | 30.0% | |
| CCAATGTGAAATTGATAAAG+AGG | - | chr5_3:55646761-55646780 | Msa0819310:CDS | 30.0% | |
| CAGTTATTGGTATCAGAAAA+TGG | + | chr5_3:55646874-55646893 | None:intergenic | 30.0% | |
| ! | CATTTTCTGATACCAATAAC+TGG | - | chr5_3:55646872-55646891 | Msa0819310:CDS | 30.0% |
| !! | TGAGGAGAGTATTATATGAT+CGG | + | chr5_3:55646898-55646917 | None:intergenic | 30.0% |
| AAGTCTGAATAAAATTGCAG+TGG | - | chr5_3:55646980-55646999 | Msa0819310:CDS | 30.0% | |
| ATAGCAAAGAAAGGTAAAGA+AGG | - | chr5_3:55647063-55647082 | Msa0819310:CDS | 30.0% | |
| TAGCAAAGAAAGGTAAAGAA+GGG | - | chr5_3:55647064-55647083 | Msa0819310:CDS | 30.0% | |
| ! | CTTCTTTGATATGTTGATGA+TGG | - | chr5_3:55647158-55647177 | Msa0819310:CDS | 30.0% |
| !! | ATTAAGTTGATTTCTTCAGC+TGG | - | chr5_3:55647219-55647238 | Msa0819310:CDS | 30.0% |
| ! | TTACTCCAATTTTAGGCTTA+AGG | - | chr5_3:55647259-55647278 | Msa0819310:CDS | 30.0% |
| !! | GCTTTGAGCTTTGAGTAAAT+TGG | + | chr5_3:55645697-55645716 | None:intergenic | 35.0% |
| !! | CATGTTTTTGAAGGGTGAAT+TGG | + | chr5_3:55645849-55645868 | None:intergenic | 35.0% |
| !! | GGATGAAGCATGTTTTTGAA+GGG | + | chr5_3:55645857-55645876 | None:intergenic | 35.0% |
| !! | TGGATGAAGCATGTTTTTGA+AGG | + | chr5_3:55645858-55645877 | None:intergenic | 35.0% |
| ATGCGAATAATGACTCATTC+TGG | - | chr5_3:55645885-55645904 | Msa0819310:CDS | 35.0% | |
| CTTCTCTCAACATAATGTCA+CGG | - | chr5_3:55645911-55645930 | Msa0819310:CDS | 35.0% | |
| ! | GCCCTTTTCAATCAACAAAT+TGG | + | chr5_3:55646204-55646223 | None:intergenic | 35.0% |
| ! | ATTTGTTGATTGAAAAGGGC+AGG | - | chr5_3:55646204-55646223 | Msa0819310:intron | 35.0% |
| ! | TTTGTTGATTGAAAAGGGCA+GGG | - | chr5_3:55646205-55646224 | Msa0819310:intron | 35.0% |
| !! | ATTCAATGGATTGGAGTCAT+TGG | - | chr5_3:55646232-55646251 | Msa0819310:intron | 35.0% |
| TTGTGGGAATGATTTAGCAA+GGG | + | chr5_3:55646294-55646313 | None:intergenic | 35.0% | |
| TTTGTGGGAATGATTTAGCA+AGG | + | chr5_3:55646295-55646314 | None:intergenic | 35.0% | |
| TGCTAAATCATTCCCACAAA+TGG | - | chr5_3:55646295-55646314 | Msa0819310:intron | 35.0% | |
| GAGAATCTAAACTATGTTGG+TGG | - | chr5_3:55646368-55646387 | Msa0819310:intron | 35.0% | |
| TATCACTTGAATTGGCATGA+TGG | - | chr5_3:55646467-55646486 | Msa0819310:intron | 35.0% | |
| TTGACGAGTGCCAATTAATT+TGG | - | chr5_3:55646547-55646566 | Msa0819310:CDS | 35.0% | |
| TGACGAGTGCCAATTAATTT+GGG | - | chr5_3:55646548-55646567 | Msa0819310:CDS | 35.0% | |
| TAAGGGACACATAGAGTAAT+TGG | - | chr5_3:55646800-55646819 | Msa0819310:CDS | 35.0% | |
| TTATATGATCGGCCAGTTAT+TGG | + | chr5_3:55646887-55646906 | None:intergenic | 35.0% | |
| AAGGATGCAATAGCAAAGAA+AGG | - | chr5_3:55647054-55647073 | Msa0819310:CDS | 35.0% | |
| AAAGAAAGGTAAAGAAGGGA+AGG | - | chr5_3:55647068-55647087 | Msa0819310:CDS | 35.0% | |
| AAGAGAGAAACGAGAAAGAA+TGG | - | chr5_3:55647196-55647215 | Msa0819310:CDS | 35.0% | |
| AGAGACCTTAAGCCTAAAAT+TGG | + | chr5_3:55647267-55647286 | None:intergenic | 35.0% | |
| !! | GCTTTGAGCTTTGAGTAAAT+TGG | + | chr5_3:55645697-55645716 | None:intergenic | 35.0% |
| !! | CATGTTTTTGAAGGGTGAAT+TGG | + | chr5_3:55645849-55645868 | None:intergenic | 35.0% |
| !! | GGATGAAGCATGTTTTTGAA+GGG | + | chr5_3:55645857-55645876 | None:intergenic | 35.0% |
| !! | TGGATGAAGCATGTTTTTGA+AGG | + | chr5_3:55645858-55645877 | None:intergenic | 35.0% |
| ATGCGAATAATGACTCATTC+TGG | - | chr5_3:55645885-55645904 | Msa0819310:CDS | 35.0% | |
| CTTCTCTCAACATAATGTCA+CGG | - | chr5_3:55645911-55645930 | Msa0819310:CDS | 35.0% | |
| ! | GCCCTTTTCAATCAACAAAT+TGG | + | chr5_3:55646204-55646223 | None:intergenic | 35.0% |
| ! | ATTTGTTGATTGAAAAGGGC+AGG | - | chr5_3:55646204-55646223 | Msa0819310:intron | 35.0% |
| ! | TTTGTTGATTGAAAAGGGCA+GGG | - | chr5_3:55646205-55646224 | Msa0819310:intron | 35.0% |
| !! | ATTCAATGGATTGGAGTCAT+TGG | - | chr5_3:55646232-55646251 | Msa0819310:intron | 35.0% |
| TTGTGGGAATGATTTAGCAA+GGG | + | chr5_3:55646294-55646313 | None:intergenic | 35.0% | |
| TTTGTGGGAATGATTTAGCA+AGG | + | chr5_3:55646295-55646314 | None:intergenic | 35.0% | |
| TGCTAAATCATTCCCACAAA+TGG | - | chr5_3:55646295-55646314 | Msa0819310:intron | 35.0% | |
| GAGAATCTAAACTATGTTGG+TGG | - | chr5_3:55646368-55646387 | Msa0819310:intron | 35.0% | |
| TATCACTTGAATTGGCATGA+TGG | - | chr5_3:55646467-55646486 | Msa0819310:intron | 35.0% | |
| TTGACGAGTGCCAATTAATT+TGG | - | chr5_3:55646547-55646566 | Msa0819310:CDS | 35.0% | |
| TGACGAGTGCCAATTAATTT+GGG | - | chr5_3:55646548-55646567 | Msa0819310:CDS | 35.0% | |
| TAAGGGACACATAGAGTAAT+TGG | - | chr5_3:55646800-55646819 | Msa0819310:CDS | 35.0% | |
| TTATATGATCGGCCAGTTAT+TGG | + | chr5_3:55646887-55646906 | None:intergenic | 35.0% | |
| AAGGATGCAATAGCAAAGAA+AGG | - | chr5_3:55647054-55647073 | Msa0819310:CDS | 35.0% | |
| AAAGAAAGGTAAAGAAGGGA+AGG | - | chr5_3:55647068-55647087 | Msa0819310:CDS | 35.0% | |
| AAGAGAGAAACGAGAAAGAA+TGG | - | chr5_3:55647196-55647215 | Msa0819310:CDS | 35.0% | |
| AGAGACCTTAAGCCTAAAAT+TGG | + | chr5_3:55647267-55647286 | None:intergenic | 35.0% | |
| TCAAAGCTCAAAGCCACATA+TGG | - | chr5_3:55645703-55645722 | Msa0819310:CDS | 40.0% | |
| TCATTATTCGCATCAAGCGA+TGG | + | chr5_3:55645878-55645897 | None:intergenic | 40.0% | |
| !! | ATCCAGTTTTGACAAATCCG+TGG | - | chr5_3:55646033-55646052 | Msa0819310:intron | 40.0% |
| CAAGTAGAGAATTGATGCCA+CGG | + | chr5_3:55646053-55646072 | None:intergenic | 40.0% | |
| ! | ACCACATTTGAAACGACACA+TGG | - | chr5_3:55646092-55646111 | Msa0819310:intron | 40.0% |
| ! | CCACATTTGAAACGACACAT+GGG | - | chr5_3:55646093-55646112 | Msa0819310:intron | 40.0% |
| GACACATGGGATGTTGTTAT+GGG | - | chr5_3:55646106-55646125 | Msa0819310:intron | 40.0% | |
| TAATCGAGTATCACTTGCCA+TGG | + | chr5_3:55646177-55646196 | None:intergenic | 40.0% | |
| ! | TTGTTGATTGAAAAGGGCAG+GGG | - | chr5_3:55646206-55646225 | Msa0819310:intron | 40.0% |
| ! | TTGGAGTCATTGGTTGATGT+TGG | - | chr5_3:55646242-55646261 | Msa0819310:intron | 40.0% |
| GATCTACCACATGTTGTTGA+TGG | - | chr5_3:55646332-55646351 | Msa0819310:intron | 40.0% | |
| TTCAACAAAATGGCGTCTGT+TGG | + | chr5_3:55646416-55646435 | None:intergenic | 40.0% | |
| !! | AACAGACGCCATTTTGTTGA+AGG | - | chr5_3:55646415-55646434 | Msa0819310:intron | 40.0% |
| TTGAGGAATAGCACAATCCA+AGG | + | chr5_3:55646506-55646525 | None:intergenic | 40.0% | |
| TGCAGTGGATATTGCATGAT+TGG | - | chr5_3:55646995-55647014 | Msa0819310:CDS | 40.0% | |
| GAAGGTGATTGTGATAGACA+TGG | - | chr5_3:55647086-55647105 | Msa0819310:CDS | 40.0% | |
| GATTGTGATAGACATGGTGT+TGG | - | chr5_3:55647092-55647111 | Msa0819310:CDS | 40.0% | |
| ! | ATGGTGTTGGAAAGTGAGAA+GGG | - | chr5_3:55647105-55647124 | Msa0819310:CDS | 40.0% |
| !! | TTGATGATGGTAGTACTCAC+AGG | - | chr5_3:55647171-55647190 | Msa0819310:CDS | 40.0% |
| TCAAAGCTCAAAGCCACATA+TGG | - | chr5_3:55645703-55645722 | Msa0819310:CDS | 40.0% | |
| TCATTATTCGCATCAAGCGA+TGG | + | chr5_3:55645878-55645897 | None:intergenic | 40.0% | |
| !! | ATCCAGTTTTGACAAATCCG+TGG | - | chr5_3:55646033-55646052 | Msa0819310:intron | 40.0% |
| CAAGTAGAGAATTGATGCCA+CGG | + | chr5_3:55646053-55646072 | None:intergenic | 40.0% | |
| ! | ACCACATTTGAAACGACACA+TGG | - | chr5_3:55646092-55646111 | Msa0819310:intron | 40.0% |
| ! | CCACATTTGAAACGACACAT+GGG | - | chr5_3:55646093-55646112 | Msa0819310:intron | 40.0% |
| GACACATGGGATGTTGTTAT+GGG | - | chr5_3:55646106-55646125 | Msa0819310:intron | 40.0% | |
| TAATCGAGTATCACTTGCCA+TGG | + | chr5_3:55646177-55646196 | None:intergenic | 40.0% | |
| ! | TTGTTGATTGAAAAGGGCAG+GGG | - | chr5_3:55646206-55646225 | Msa0819310:intron | 40.0% |
| ! | TTGGAGTCATTGGTTGATGT+TGG | - | chr5_3:55646242-55646261 | Msa0819310:intron | 40.0% |
| GATCTACCACATGTTGTTGA+TGG | - | chr5_3:55646332-55646351 | Msa0819310:intron | 40.0% | |
| TTCAACAAAATGGCGTCTGT+TGG | + | chr5_3:55646416-55646435 | None:intergenic | 40.0% | |
| !! | AACAGACGCCATTTTGTTGA+AGG | - | chr5_3:55646415-55646434 | Msa0819310:intron | 40.0% |
| TTGAGGAATAGCACAATCCA+AGG | + | chr5_3:55646506-55646525 | None:intergenic | 40.0% | |
| TGCAGTGGATATTGCATGAT+TGG | - | chr5_3:55646995-55647014 | Msa0819310:CDS | 40.0% | |
| GAAGGTGATTGTGATAGACA+TGG | - | chr5_3:55647086-55647105 | Msa0819310:CDS | 40.0% | |
| GATTGTGATAGACATGGTGT+TGG | - | chr5_3:55647092-55647111 | Msa0819310:CDS | 40.0% | |
| ! | ATGGTGTTGGAAAGTGAGAA+GGG | - | chr5_3:55647105-55647124 | Msa0819310:CDS | 40.0% |
| !! | TTGATGATGGTAGTACTCAC+AGG | - | chr5_3:55647171-55647190 | Msa0819310:CDS | 40.0% |
| TGCCACGGATTTGTCAAAAC+TGG | + | chr5_3:55646038-55646057 | None:intergenic | 45.0% | |
| CGTGGCATCAATTCTCTACT+TGG | - | chr5_3:55646051-55646070 | Msa0819310:intron | 45.0% | |
| !! | CCCATGTGTCGTTTCAAATG+TGG | + | chr5_3:55646096-55646115 | None:intergenic | 45.0% |
| CGACACATGGGATGTTGTTA+TGG | - | chr5_3:55646105-55646124 | Msa0819310:intron | 45.0% | |
| !! | CAGGGGAGTATTCAATGGAT+TGG | - | chr5_3:55646223-55646242 | Msa0819310:intron | 45.0% |
| ! | GAGTCATTGGTTGATGTTGG+AGG | - | chr5_3:55646245-55646264 | Msa0819310:intron | 45.0% |
| ! | TCATTGGTTGATGTTGGAGG+AGG | - | chr5_3:55646248-55646267 | Msa0819310:intron | 45.0% |
| TGCAAGCCATCAACAACATG+TGG | + | chr5_3:55646341-55646360 | None:intergenic | 45.0% | |
| !! | CATGTTGTTGATGGCTTGCA+AGG | - | chr5_3:55646341-55646360 | Msa0819310:intron | 45.0% |
| AACAAAATGGCGTCTGTTGG+AGG | + | chr5_3:55646413-55646432 | None:intergenic | 45.0% | |
| !! | ATGGTGTTGACTTGAGACCT+TGG | - | chr5_3:55646486-55646505 | Msa0819310:intron | 45.0% |
| ! | CATGGTGTTGGAAAGTGAGA+AGG | - | chr5_3:55647104-55647123 | Msa0819310:CDS | 45.0% |
| TGCCACGGATTTGTCAAAAC+TGG | + | chr5_3:55646038-55646057 | None:intergenic | 45.0% | |
| CGTGGCATCAATTCTCTACT+TGG | - | chr5_3:55646051-55646070 | Msa0819310:intron | 45.0% | |
| !! | CCCATGTGTCGTTTCAAATG+TGG | + | chr5_3:55646096-55646115 | None:intergenic | 45.0% |
| CGACACATGGGATGTTGTTA+TGG | - | chr5_3:55646105-55646124 | Msa0819310:intron | 45.0% | |
| !! | CAGGGGAGTATTCAATGGAT+TGG | - | chr5_3:55646223-55646242 | Msa0819310:intron | 45.0% |
| ! | GAGTCATTGGTTGATGTTGG+AGG | - | chr5_3:55646245-55646264 | Msa0819310:intron | 45.0% |
| ! | TCATTGGTTGATGTTGGAGG+AGG | - | chr5_3:55646248-55646267 | Msa0819310:intron | 45.0% |
| TGCAAGCCATCAACAACATG+TGG | + | chr5_3:55646341-55646360 | None:intergenic | 45.0% | |
| !! | CATGTTGTTGATGGCTTGCA+AGG | - | chr5_3:55646341-55646360 | Msa0819310:intron | 45.0% |
| AACAAAATGGCGTCTGTTGG+AGG | + | chr5_3:55646413-55646432 | None:intergenic | 45.0% | |
| !! | ATGGTGTTGACTTGAGACCT+TGG | - | chr5_3:55646486-55646505 | Msa0819310:intron | 45.0% |
| ! | CATGGTGTTGGAAAGTGAGA+AGG | - | chr5_3:55647104-55647123 | Msa0819310:CDS | 45.0% |
| !! | ACGAAAGGTGTCACGCTCAT+TGG | + | chr5_3:55645999-55646018 | None:intergenic | 50.0% |
| !! | AAGGGCAGGGGAGTATTCAA+TGG | - | chr5_3:55646218-55646237 | Msa0819310:intron | 50.0% |
| TTTAGCAAGGGCCTTTGCCA+TGG | + | chr5_3:55646282-55646301 | None:intergenic | 50.0% | |
| !! | ACGAAAGGTGTCACGCTCAT+TGG | + | chr5_3:55645999-55646018 | None:intergenic | 50.0% |
| !! | AAGGGCAGGGGAGTATTCAA+TGG | - | chr5_3:55646218-55646237 | Msa0819310:intron | 50.0% |
| TTTAGCAAGGGCCTTTGCCA+TGG | + | chr5_3:55646282-55646301 | None:intergenic | 50.0% | |
| ! | GGTTGATGTTGGAGGAGGCA+CGG | - | chr5_3:55646253-55646272 | Msa0819310:intron | 55.0% |
| ! | GTTGATGTTGGAGGAGGCAC+GGG | - | chr5_3:55646254-55646273 | Msa0819310:intron | 55.0% |
| ! | TTGATGTTGGAGGAGGCACG+GGG | - | chr5_3:55646255-55646274 | Msa0819310:intron | 55.0% |
| ! | GGTTGATGTTGGAGGAGGCA+CGG | - | chr5_3:55646253-55646272 | Msa0819310:intron | 55.0% |
| ! | GTTGATGTTGGAGGAGGCAC+GGG | - | chr5_3:55646254-55646273 | Msa0819310:intron | 55.0% |
| ! | TTGATGTTGGAGGAGGCACG+GGG | - | chr5_3:55646255-55646274 | Msa0819310:intron | 55.0% |
| ! | TCGAGCATCGCGTGCACGAA+AGG | + | chr5_3:55646014-55646033 | None:intergenic | 60.0% |
| ! | TCGAGCATCGCGTGCACGAA+AGG | + | chr5_3:55646014-55646033 | None:intergenic | 60.0% |
| AGGCACGGGGACCATGGCAA+AGG | - | chr5_3:55646268-55646287 | Msa0819310:intron | 65.0% | |
| AGGCACGGGGACCATGGCAA+AGG | - | chr5_3:55646268-55646287 | Msa0819310:intron | 65.0% | |
| ! | TGGAGGAGGCACGGGGACCA+TGG | - | chr5_3:55646262-55646281 | Msa0819310:intron | 70.0% |
| ! | TGGAGGAGGCACGGGGACCA+TGG | - | chr5_3:55646262-55646281 | Msa0819310:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 55645660 | 55647305 | 55645660 | ID=Msa0819310;Name=Msa0819310 |
| chr5_3 | mRNA | 55645660 | 55647305 | 55645660 | ID=Msa0819310-mRNA-1;Parent=Msa0819310;Name=Msa0819310-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|360 |
| chr5_3 | exon | 55646529 | 55647305 | 55646529 | ID=Msa0819310-mRNA-1:exon:16853;Parent=Msa0819310-mRNA-1 |
| chr5_3 | exon | 55645660 | 55645965 | 55645660 | ID=Msa0819310-mRNA-1:exon:16852;Parent=Msa0819310-mRNA-1 |
| chr5_3 | CDS | 55646529 | 55647305 | 55646529 | ID=Msa0819310-mRNA-1:cds;Parent=Msa0819310-mRNA-1 |
| chr5_3 | CDS | 55645660 | 55645965 | 55645660 | ID=Msa0819310-mRNA-1:cds;Parent=Msa0819310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
