Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263050 | XP_003610522.1 | 92.857 | 140 | 9 | 1 | 1 | 139 | 1 | 140 | 6.38e-37 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263050 | G7JKJ2 | 92.857 | 140 | 9 | 1 | 1 | 139 | 1 | 140 | 3.05e-37 | 133 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0646010 | Msa1263050 | 0.800327 | 1.518305e-48 | -8.615850e-47 |
| Msa0646430 | Msa1263050 | 0.817142 | 3.843839e-52 | -8.615850e-47 |
| Msa0689830 | Msa1263050 | 0.820150 | 7.986743e-53 | -8.615850e-47 |
| Msa0745140 | Msa1263050 | 0.820196 | 7.794148e-53 | -8.615850e-47 |
| Msa0776640 | Msa1263050 | 0.816432 | 5.547088e-52 | -8.615850e-47 |
| Msa0776940 | Msa1263050 | 0.803262 | 3.791580e-49 | -8.615850e-47 |
| Msa0804170 | Msa1263050 | 0.800840 | 1.193438e-48 | -8.615850e-47 |
| Msa0825920 | Msa1263050 | 0.819033 | 1.436395e-52 | -8.615850e-47 |
| Msa0168380 | Msa1263050 | 0.809875 | 1.523896e-50 | -8.615850e-47 |
| Msa0206370 | Msa1263050 | 0.812728 | 3.663638e-51 | -8.615850e-47 |
| Msa1263050 | Msa1265570 | 0.825090 | 5.665429e-54 | -8.615850e-47 |
| Msa1263050 | Msa1334670 | 0.825553 | 4.402406e-54 | -8.615850e-47 |
| Msa1263050 | Msa1365230 | 0.825740 | 3.975504e-54 | -8.615850e-47 |
| Msa1263050 | Msa1413020 | 0.801786 | 7.639282e-49 | -8.615850e-47 |
| Msa1263050 | Msa1447900 | 0.802518 | 5.400689e-49 | -8.615850e-47 |
| Msa0416210 | Msa1263050 | 0.804522 | 2.074967e-49 | -8.615850e-47 |
| Msa0422820 | Msa1263050 | 0.805477 | 1.310019e-49 | -8.615850e-47 |
| Msa0422900 | Msa1263050 | 0.802075 | 6.662616e-49 | -8.615850e-47 |
| Msa0260980 | Msa1263050 | 0.813516 | 2.460063e-51 | -8.615850e-47 |
| Msa0328870 | Msa1263050 | 0.801864 | 7.364392e-49 | -8.615850e-47 |
| Msa1130770 | Msa1263050 | 0.803521 | 3.351121e-49 | -8.615850e-47 |
| Msa1217890 | Msa1263050 | 0.805275 | 1.443759e-49 | -8.615850e-47 |
| Msa1220720 | Msa1263050 | 0.816684 | 4.870836e-52 | -8.615850e-47 |
| Msa1223860 | Msa1263050 | 0.998418 | 1.745731e-264 | -8.615850e-47 |
| Msa0549960 | Msa1263050 | 0.804723 | 1.883954e-49 | -8.615850e-47 |
| Msa0850600 | Msa1263050 | 0.801999 | 6.907715e-49 | -8.615850e-47 |
| Msa0865420 | Msa1263050 | 0.807888 | 4.056603e-50 | -8.615850e-47 |
| Msa0913520 | Msa1263050 | 0.800819 | 1.205071e-48 | -8.615850e-47 |
| Msa0926310 | Msa1263050 | 0.803704 | 3.070821e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1263050 | MtrunA17_Chr4g0075751 | 92.857 | 140 | 9 | 1 | 1 | 139 | 1 | 140 | 5.87e-41 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 33 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCACTGCTACTACTTCTT+CGG | 0.329034 | 8_2:-66136212 | None:intergenic |
| TTCTTCAACTGTTGCTGCTA+TGG | 0.377581 | 8_2:-66136461 | None:intergenic |
| TTACCTCAACAGTGGCCATT+TGG | 0.390008 | 8_2:-66135597 | None:intergenic |
| TGTGTACTCTCAGCTTCAAC+TGG | 0.435451 | 8_2:-66136253 | None:intergenic |
| TGCTACTACTTCTTCGGTGG+TGG | 0.459750 | 8_2:-66136206 | None:intergenic |
| ACTACTTCTTCGGTGGTGGC+TGG | 0.461076 | 8_2:-66136202 | None:intergenic |
| CACAAGTAACTGAGGAAGCC+AGG | 0.463325 | 8_2:+66136272 | Msa1263050:CDS |
| CGGGTTCTCTACCTCTGCCC+TGG | 0.474403 | 8_2:-66136290 | None:intergenic |
| ATTCATCTTTCCATTCCAAA+TGG | 0.477645 | 8_2:+66135582 | Msa1263050:exon |
| CGGTGTTGTTTCCTCGACCT+TGG | 0.487832 | 8_2:-66136155 | None:intergenic |
| AGAAACTACTGAAACAGAAT+CGG | 0.495909 | 8_2:+66136363 | Msa1263050:CDS |
| GAAGTAGTAGCAGTGGAGAA+AGG | 0.498978 | 8_2:+66136217 | Msa1263050:CDS |
| CAGGGCAGAGGTAGAGAACC+CGG | 0.499260 | 8_2:+66136291 | Msa1263050:CDS |
| GGTGGTGGCTGGTTCTGAAG+TGG | 0.534204 | 8_2:-66136191 | None:intergenic |
| AGAGGAAGTATCAGCTGAAG+AGG | 0.536609 | 8_2:+66136336 | Msa1263050:CDS |
| ATTCCAAATGGCCACTGTTG+AGG | 0.536707 | 8_2:+66135594 | Msa1263050:exon |
| AACTGAGGAAGCCAGGGCAG+AGG | 0.537053 | 8_2:+66136279 | Msa1263050:CDS |
| TCAACAGTGGCCATTTGGAA+TGG | 0.543349 | 8_2:-66135592 | None:intergenic |
| GTGGTGGCTGGTTCTGAAGT+GGG | 0.546159 | 8_2:-66136190 | None:intergenic |
| CACCGAAGAAGTAGTAGCAG+TGG | 0.549057 | 8_2:+66136210 | Msa1263050:CDS |
| GAAGTGGGAACCTCGGAGGC+CGG | 0.549296 | 8_2:-66136175 | None:intergenic |
| AGAAGAAGTATCAACTGAAG+AGG | 0.562005 | 8_2:+66136408 | Msa1263050:CDS |
| CACTGCTACTACTTCTTCGG+TGG | 0.564441 | 8_2:-66136209 | None:intergenic |
| TGGTTCTGAAGTGGGAACCT+CGG | 0.596316 | 8_2:-66136182 | None:intergenic |
| AGTTGAGGTAACCAAGGTCG+AGG | 0.604857 | 8_2:+66136144 | Msa1263050:CDS |
| GACAGAAAATGAAACAGTTG+AGG | 0.607247 | 8_2:+66136129 | Msa1263050:CDS |
| ACAAGTAACTGAGGAAGCCA+GGG | 0.632141 | 8_2:+66136273 | Msa1263050:CDS |
| TGAGAGTACACAAGTAACTG+AGG | 0.633074 | 8_2:+66136264 | Msa1263050:CDS |
| TGAAACAGTTGAGGTAACCA+AGG | 0.643241 | 8_2:+66136138 | Msa1263050:CDS |
| TTCTGAAGTGGGAACCTCGG+AGG | 0.645606 | 8_2:-66136179 | None:intergenic |
| GGAAACAACACCGGCCTCCG+AGG | 0.649162 | 8_2:+66136165 | Msa1263050:CDS |
| TCTTTGAATTACCTCAACAG+TGG | 0.681859 | 8_2:-66135605 | None:intergenic |
| CAAGGTCGAGGAAACAACAC+CGG | 0.700669 | 8_2:+66136156 | Msa1263050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGATTATTGATCTTTTT+TGG | - | chr8_2:66135874-66135893 | None:intergenic | 15.0% |
| !!! | AATTGATTATTGATCTTTTT+TGG | - | chr8_2:66135874-66135893 | None:intergenic | 15.0% |
| !! | AAACAAAAATATTAGTCCAA+TGG | + | chr8_2:66135794-66135813 | Msa1263050:intron | 20.0% |
| !!! | ATTTGTTGTTTATAATCCAT+TGG | - | chr8_2:66135813-66135832 | None:intergenic | 20.0% |
| !! | TGGATTATGAAAAATAAACA+CGG | - | chr8_2:66135854-66135873 | None:intergenic | 20.0% |
| !! | AAACAAAAATATTAGTCCAA+TGG | + | chr8_2:66135794-66135813 | Msa1263050:intron | 20.0% |
| !!! | ATTTGTTGTTTATAATCCAT+TGG | - | chr8_2:66135813-66135832 | None:intergenic | 20.0% |
| !! | TGGATTATGAAAAATAAACA+CGG | - | chr8_2:66135854-66135873 | None:intergenic | 20.0% |
| !!! | AATATTTTTGTTTGATCCAC+TGG | - | chr8_2:66135787-66135806 | None:intergenic | 25.0% |
| ! | GATTATGAAAAATAAACACG+GGG | - | chr8_2:66135852-66135871 | None:intergenic | 25.0% |
| ! | GGATTATGAAAAATAAACAC+GGG | - | chr8_2:66135853-66135872 | None:intergenic | 25.0% |
| !!! | AATATTTTTGTTTGATCCAC+TGG | - | chr8_2:66135787-66135806 | None:intergenic | 25.0% |
| ! | GATTATGAAAAATAAACACG+GGG | - | chr8_2:66135852-66135871 | None:intergenic | 25.0% |
| ! | GGATTATGAAAAATAAACAC+GGG | - | chr8_2:66135853-66135872 | None:intergenic | 25.0% |
| ATTCATCTTTCCATTCCAAA+TGG | + | chr8_2:66135582-66135601 | Msa1263050:exon | 30.0% | |
| ATATGACCAAGTAACTCATA+GGG | - | chr8_2:66136027-66136046 | None:intergenic | 30.0% | |
| TATATGACCAAGTAACTCAT+AGG | - | chr8_2:66136028-66136047 | None:intergenic | 30.0% | |
| TAACAAAACATGTTGAGCAT+TGG | + | chr8_2:66136052-66136071 | Msa1263050:intron | 30.0% | |
| AGAAACTACTGAAACAGAAT+CGG | + | chr8_2:66136363-66136382 | Msa1263050:CDS | 30.0% | |
| ATTCATCTTTCCATTCCAAA+TGG | + | chr8_2:66135582-66135601 | Msa1263050:exon | 30.0% | |
| ATATGACCAAGTAACTCATA+GGG | - | chr8_2:66136027-66136046 | None:intergenic | 30.0% | |
| TATATGACCAAGTAACTCAT+AGG | - | chr8_2:66136028-66136047 | None:intergenic | 30.0% | |
| TAACAAAACATGTTGAGCAT+TGG | + | chr8_2:66136052-66136071 | Msa1263050:intron | 30.0% | |
| AGAAACTACTGAAACAGAAT+CGG | + | chr8_2:66136363-66136382 | Msa1263050:CDS | 30.0% | |
| TCTTTGAATTACCTCAACAG+TGG | - | chr8_2:66135608-66135627 | None:intergenic | 35.0% | |
| ! | GCATTGGTGGTTAATGAAAA+TGG | + | chr8_2:66136068-66136087 | Msa1263050:intron | 35.0% |
| TTAATGAAAATGGATCCTGC+AGG | + | chr8_2:66136078-66136097 | Msa1263050:intron | 35.0% | |
| ! | TCATTTTCTGTCACAGTTGT+TGG | - | chr8_2:66136121-66136140 | None:intergenic | 35.0% |
| GACAGAAAATGAAACAGTTG+AGG | + | chr8_2:66136129-66136148 | Msa1263050:CDS | 35.0% | |
| !! | TCTTTCACTTCGACTTTTTC+AGG | - | chr8_2:66136319-66136338 | None:intergenic | 35.0% |
| TGAAAAAGTCGAAGTGAAAG+AGG | + | chr8_2:66136318-66136337 | Msa1263050:CDS | 35.0% | |
| !! | TCTTTTGCTTCGACTTTTTC+AGG | - | chr8_2:66136391-66136410 | None:intergenic | 35.0% |
| !! | AGAAGAAGTATCAACTGAAG+AGG | + | chr8_2:66136408-66136427 | Msa1263050:CDS | 35.0% |
| TCTTTGAATTACCTCAACAG+TGG | - | chr8_2:66135608-66135627 | None:intergenic | 35.0% | |
| ! | GCATTGGTGGTTAATGAAAA+TGG | + | chr8_2:66136068-66136087 | Msa1263050:intron | 35.0% |
| TTAATGAAAATGGATCCTGC+AGG | + | chr8_2:66136078-66136097 | Msa1263050:intron | 35.0% | |
| ! | TCATTTTCTGTCACAGTTGT+TGG | - | chr8_2:66136121-66136140 | None:intergenic | 35.0% |
| GACAGAAAATGAAACAGTTG+AGG | + | chr8_2:66136129-66136148 | Msa1263050:CDS | 35.0% | |
| !! | TCTTTCACTTCGACTTTTTC+AGG | - | chr8_2:66136319-66136338 | None:intergenic | 35.0% |
| TGAAAAAGTCGAAGTGAAAG+AGG | + | chr8_2:66136318-66136337 | Msa1263050:CDS | 35.0% | |
| !! | TCTTTTGCTTCGACTTTTTC+AGG | - | chr8_2:66136391-66136410 | None:intergenic | 35.0% |
| !! | AGAAGAAGTATCAACTGAAG+AGG | + | chr8_2:66136408-66136427 | Msa1263050:CDS | 35.0% |
| ! | ATTCACACAGCATTTTCCAG+TGG | + | chr8_2:66135768-66135787 | Msa1263050:intron | 40.0% |
| CATGTTCCCTATGAGTTACT+TGG | + | chr8_2:66136018-66136037 | Msa1263050:intron | 40.0% | |
| !! | CAAAACATGTTGAGCATTGG+TGG | + | chr8_2:66136055-66136074 | Msa1263050:intron | 40.0% |
| TGAAACAGTTGAGGTAACCA+AGG | + | chr8_2:66136138-66136157 | Msa1263050:CDS | 40.0% | |
| ! | TGAGAGTACACAAGTAACTG+AGG | + | chr8_2:66136264-66136283 | Msa1263050:CDS | 40.0% |
| !!! | ACTTCGACTTTTTCAGGTTC+CGG | - | chr8_2:66136313-66136332 | None:intergenic | 40.0% |
| TTCTTCAACTGTTGCTGCTA+TGG | - | chr8_2:66136464-66136483 | None:intergenic | 40.0% | |
| ! | ATTCACACAGCATTTTCCAG+TGG | + | chr8_2:66135768-66135787 | Msa1263050:intron | 40.0% |
| CATGTTCCCTATGAGTTACT+TGG | + | chr8_2:66136018-66136037 | Msa1263050:intron | 40.0% | |
| !! | CAAAACATGTTGAGCATTGG+TGG | + | chr8_2:66136055-66136074 | Msa1263050:intron | 40.0% |
| TGAAACAGTTGAGGTAACCA+AGG | + | chr8_2:66136138-66136157 | Msa1263050:CDS | 40.0% | |
| ! | TGAGAGTACACAAGTAACTG+AGG | + | chr8_2:66136264-66136283 | Msa1263050:CDS | 40.0% |
| !!! | ACTTCGACTTTTTCAGGTTC+CGG | - | chr8_2:66136313-66136332 | None:intergenic | 40.0% |
| TTCTTCAACTGTTGCTGCTA+TGG | - | chr8_2:66136464-66136483 | None:intergenic | 40.0% | |
| TCAACAGTGGCCATTTGGAA+TGG | - | chr8_2:66135595-66135614 | None:intergenic | 45.0% | |
| ATTCCAAATGGCCACTGTTG+AGG | + | chr8_2:66135594-66135613 | Msa1263050:exon | 45.0% | |
| TTACCTCAACAGTGGCCATT+TGG | - | chr8_2:66135600-66135619 | None:intergenic | 45.0% | |
| CTCCACTGCTACTACTTCTT+CGG | - | chr8_2:66136215-66136234 | None:intergenic | 45.0% | |
| GAAGTAGTAGCAGTGGAGAA+AGG | + | chr8_2:66136217-66136236 | Msa1263050:CDS | 45.0% | |
| TGTGTACTCTCAGCTTCAAC+TGG | - | chr8_2:66136256-66136275 | None:intergenic | 45.0% | |
| ACAAGTAACTGAGGAAGCCA+GGG | + | chr8_2:66136273-66136292 | Msa1263050:CDS | 45.0% | |
| !!! | CTTCGACTTTTTCAGGTTCC+GGG | - | chr8_2:66136312-66136331 | None:intergenic | 45.0% |
| !! | AGAGGAAGTATCAGCTGAAG+AGG | + | chr8_2:66136336-66136355 | Msa1263050:CDS | 45.0% |
| TCAACAGTGGCCATTTGGAA+TGG | - | chr8_2:66135595-66135614 | None:intergenic | 45.0% | |
| ATTCCAAATGGCCACTGTTG+AGG | + | chr8_2:66135594-66135613 | Msa1263050:exon | 45.0% | |
| TTACCTCAACAGTGGCCATT+TGG | - | chr8_2:66135600-66135619 | None:intergenic | 45.0% | |
| CTCCACTGCTACTACTTCTT+CGG | - | chr8_2:66136215-66136234 | None:intergenic | 45.0% | |
| GAAGTAGTAGCAGTGGAGAA+AGG | + | chr8_2:66136217-66136236 | Msa1263050:CDS | 45.0% | |
| TGTGTACTCTCAGCTTCAAC+TGG | - | chr8_2:66136256-66136275 | None:intergenic | 45.0% | |
| ACAAGTAACTGAGGAAGCCA+GGG | + | chr8_2:66136273-66136292 | Msa1263050:CDS | 45.0% | |
| !!! | CTTCGACTTTTTCAGGTTCC+GGG | - | chr8_2:66136312-66136331 | None:intergenic | 45.0% |
| !! | AGAGGAAGTATCAGCTGAAG+AGG | + | chr8_2:66136336-66136355 | Msa1263050:CDS | 45.0% |
| ! | CTTGCTGTGTTTCAACCTGC+AGG | - | chr8_2:66136096-66136115 | None:intergenic | 50.0% |
| AGTTGAGGTAACCAAGGTCG+AGG | + | chr8_2:66136144-66136163 | Msa1263050:CDS | 50.0% | |
| CAAGGTCGAGGAAACAACAC+CGG | + | chr8_2:66136156-66136175 | Msa1263050:CDS | 50.0% | |
| !! | TGGTTCTGAAGTGGGAACCT+CGG | - | chr8_2:66136185-66136204 | None:intergenic | 50.0% |
| TGCTACTACTTCTTCGGTGG+TGG | - | chr8_2:66136209-66136228 | None:intergenic | 50.0% | |
| CACTGCTACTACTTCTTCGG+TGG | - | chr8_2:66136212-66136231 | None:intergenic | 50.0% | |
| CACCGAAGAAGTAGTAGCAG+TGG | + | chr8_2:66136210-66136229 | Msa1263050:CDS | 50.0% | |
| CACAAGTAACTGAGGAAGCC+AGG | + | chr8_2:66136272-66136291 | Msa1263050:CDS | 50.0% | |
| ! | CTTGCTGTGTTTCAACCTGC+AGG | - | chr8_2:66136096-66136115 | None:intergenic | 50.0% |
| AGTTGAGGTAACCAAGGTCG+AGG | + | chr8_2:66136144-66136163 | Msa1263050:CDS | 50.0% | |
| CAAGGTCGAGGAAACAACAC+CGG | + | chr8_2:66136156-66136175 | Msa1263050:CDS | 50.0% | |
| !! | TGGTTCTGAAGTGGGAACCT+CGG | - | chr8_2:66136185-66136204 | None:intergenic | 50.0% |
| TGCTACTACTTCTTCGGTGG+TGG | - | chr8_2:66136209-66136228 | None:intergenic | 50.0% | |
| CACTGCTACTACTTCTTCGG+TGG | - | chr8_2:66136212-66136231 | None:intergenic | 50.0% | |
| CACCGAAGAAGTAGTAGCAG+TGG | + | chr8_2:66136210-66136229 | Msa1263050:CDS | 50.0% | |
| CACAAGTAACTGAGGAAGCC+AGG | + | chr8_2:66136272-66136291 | Msa1263050:CDS | 50.0% | |
| !! | CGGTGTTGTTTCCTCGACCT+TGG | - | chr8_2:66136158-66136177 | None:intergenic | 55.0% |
| !! | TTCTGAAGTGGGAACCTCGG+AGG | - | chr8_2:66136182-66136201 | None:intergenic | 55.0% |
| !! | GTGGTGGCTGGTTCTGAAGT+GGG | - | chr8_2:66136193-66136212 | None:intergenic | 55.0% |
| ! | ACTACTTCTTCGGTGGTGGC+TGG | - | chr8_2:66136205-66136224 | None:intergenic | 55.0% |
| !! | CGGTGTTGTTTCCTCGACCT+TGG | - | chr8_2:66136158-66136177 | None:intergenic | 55.0% |
| !! | TTCTGAAGTGGGAACCTCGG+AGG | - | chr8_2:66136182-66136201 | None:intergenic | 55.0% |
| !! | GTGGTGGCTGGTTCTGAAGT+GGG | - | chr8_2:66136193-66136212 | None:intergenic | 55.0% |
| ! | ACTACTTCTTCGGTGGTGGC+TGG | - | chr8_2:66136205-66136224 | None:intergenic | 55.0% |
| !! | GGTGGTGGCTGGTTCTGAAG+TGG | - | chr8_2:66136194-66136213 | None:intergenic | 60.0% |
| AACTGAGGAAGCCAGGGCAG+AGG | + | chr8_2:66136279-66136298 | Msa1263050:CDS | 60.0% | |
| CAGGGCAGAGGTAGAGAACC+CGG | + | chr8_2:66136291-66136310 | Msa1263050:CDS | 60.0% | |
| !! | GGTGGTGGCTGGTTCTGAAG+TGG | - | chr8_2:66136194-66136213 | None:intergenic | 60.0% |
| AACTGAGGAAGCCAGGGCAG+AGG | + | chr8_2:66136279-66136298 | Msa1263050:CDS | 60.0% | |
| CAGGGCAGAGGTAGAGAACC+CGG | + | chr8_2:66136291-66136310 | Msa1263050:CDS | 60.0% | |
| GGAAACAACACCGGCCTCCG+AGG | + | chr8_2:66136165-66136184 | Msa1263050:CDS | 65.0% | |
| GAAGTGGGAACCTCGGAGGC+CGG | - | chr8_2:66136178-66136197 | None:intergenic | 65.0% | |
| CGGGTTCTCTACCTCTGCCC+TGG | - | chr8_2:66136293-66136312 | None:intergenic | 65.0% | |
| GGAAACAACACCGGCCTCCG+AGG | + | chr8_2:66136165-66136184 | Msa1263050:CDS | 65.0% | |
| GAAGTGGGAACCTCGGAGGC+CGG | - | chr8_2:66136178-66136197 | None:intergenic | 65.0% | |
| CGGGTTCTCTACCTCTGCCC+TGG | - | chr8_2:66136293-66136312 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 66135514 | 66136504 | 66135514 | ID=Msa1263050;Name=Msa1263050 |
| chr8_2 | mRNA | 66135514 | 66136504 | 66135514 | ID=Msa1263050-mRNA-1;Parent=Msa1263050;Name=Msa1263050-mRNA-1;_AED=0.01;_eAED=0.01;_QI=87|1|0.5|1|1|1|2|0|139 |
| chr8_2 | exon | 66135514 | 66135615 | 66135514 | ID=Msa1263050-mRNA-1:exon:21534;Parent=Msa1263050-mRNA-1 |
| chr8_2 | exon | 66136100 | 66136504 | 66136100 | ID=Msa1263050-mRNA-1:exon:21535;Parent=Msa1263050-mRNA-1 |
| chr8_2 | five_prime_UTR | 66135514 | 66135600 | 66135514 | ID=Msa1263050-mRNA-1:five_prime_utr;Parent=Msa1263050-mRNA-1 |
| chr8_2 | CDS | 66135601 | 66135615 | 66135601 | ID=Msa1263050-mRNA-1:cds;Parent=Msa1263050-mRNA-1 |
| chr8_2 | CDS | 66136100 | 66136504 | 66136100 | ID=Msa1263050-mRNA-1:cds;Parent=Msa1263050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
