AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0138950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0138950 MtrunA17_Chr1g0194121 95.686 255 11 0 1 255 1 255 2.85e-159 468
Msa0138950 MtrunA17_Chr7g0270541 66.409 259 65 8 8 253 2 251 4.66e-90 287
Msa0138950 MtrunA17_Chr2g0302791 54.440 259 99 7 1 253 1 246 4.60e-79 258
Msa0138950 MtrunA17_Chr1g0162871 56.115 139 56 3 115 251 74 209 5.95e-41 150
Msa0138950 MtrunA17_Chr8g0360361 69.767 86 26 0 145 230 63 148 2.79e-35 125
Msa0138950 MtrunA17_Chr8g0334671 42.051 195 90 6 47 221 70 261 6.55e-35 128
Msa0138950 MtrunA17_Chr8g0386271 58.511 94 39 0 133 226 85 178 2.37e-33 125
Msa0138950 MtrunA17_Chr4g0046991 62.921 89 33 0 133 221 59 147 3.05e-33 119
Msa0138950 MtrunA17_Chr5g0420051 61.798 89 34 0 132 220 166 254 4.50e-33 125
Msa0138950 MtrunA17_Chr2g0308321 64.773 88 31 0 133 220 157 244 2.07e-32 124
Msa0138950 MtrunA17_Chr2g0282521 63.043 92 33 1 133 224 51 141 2.69e-32 116
Msa0138950 MtrunA17_Chr7g0231911 60.000 90 36 0 137 226 139 228 3.32e-32 120
Msa0138950 MtrunA17_Chr4g0061651 64.773 88 28 1 133 220 112 196 3.52e-31 120
Msa0138950 MtrunA17_Chr3g0122411 56.842 95 41 0 132 226 150 244 8.18e-31 119
Msa0138950 MtrunA17_Chr3g0132091 48.361 122 60 2 133 251 58 179 2.08e-30 116
Msa0138950 MtrunA17_Chr7g0224821 57.447 94 39 1 133 226 64 156 4.27e-30 116
Msa0138950 MtrunA17_Chr7g0258471 63.750 80 29 0 147 226 142 221 2.58e-29 114
Msa0138950 MtrunA17_Chr8g0377421 56.250 80 35 0 147 226 132 211 9.50e-25 100
Msa0138950 MtrunA17_Chr8g0377401 57.333 75 32 0 145 219 160 234 1.97e-22 93.2
Msa0138950 MtrunA17_Chr2g0286661 48.315 89 46 0 132 220 88 176 5.84e-22 95.5
Msa0138950 MtrunA17_Chr2g0317041 60.317 63 25 0 131 193 83 145 8.12e-20 84.0
Msa0138950 MtrunA17_Chr8g0377431 45.070 71 39 0 132 202 136 206 2.44e-13 67.4
Msa0138950 MtrunA17_Chr1g0175031 55.556 54 24 0 140 193 67 120 1.30e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0138950 AT2G47070.1 57.258 248 62 8 6 253 8 211 1.59e-73 241
Msa0138950 AT3G60030.1 53.815 249 78 7 16 253 11 233 1.48e-72 239
Msa0138950 AT1G20980.1 42.128 235 90 7 26 254 38 232 1.77e-42 155
Msa0138950 AT1G76580.3 39.744 234 82 7 30 254 40 223 3.74e-40 147
Msa0138950 AT1G76580.2 39.744 234 82 7 30 254 40 223 3.76e-40 147
Msa0138950 AT1G76580.1 39.744 234 82 7 30 254 40 223 1.04e-39 147
Msa0138950 AT2G47070.2 78.313 83 17 1 171 253 1 82 2.70e-36 137
Msa0138950 AT2G33810.1 65.060 83 29 0 140 222 47 129 2.43e-34 121
Msa0138950 AT1G69170.1 61.458 96 37 0 132 227 109 204 5.70e-34 127
Msa0138950 AT1G02065.1 69.620 79 24 0 147 225 188 266 6.74e-33 123
Msa0138950 AT1G53160.2 51.181 127 47 3 134 245 35 161 1.89e-32 117
Msa0138950 AT1G53160.1 51.181 127 47 3 134 245 35 161 1.89e-32 117
Msa0138950 AT1G53160.3 60.606 99 33 2 134 226 35 133 2.25e-32 117
Msa0138950 AT3G15270.1 58.163 98 38 1 136 230 49 146 2.69e-32 117
Msa0138950 AT5G50570.1 55.319 94 40 1 140 233 94 185 1.09e-30 117
Msa0138950 AT5G50570.2 55.319 94 40 1 140 233 94 185 1.09e-30 117
Msa0138950 AT5G50670.1 55.319 94 40 1 140 233 94 185 1.09e-30 117
Msa0138950 AT5G50670.2 55.319 94 40 1 140 233 94 185 1.09e-30 117
Msa0138950 AT5G43270.3 56.701 97 42 0 147 243 169 265 1.31e-30 118
Msa0138950 AT5G43270.1 56.701 97 42 0 147 243 169 265 1.31e-30 118
Msa0138950 AT5G43270.2 56.701 97 42 0 147 243 169 265 1.31e-30 118
Msa0138950 AT1G27370.6 50.450 111 51 2 110 220 143 249 3.37e-30 116
Msa0138950 AT1G27370.1 50.450 111 51 2 110 220 143 249 4.73e-30 117
Msa0138950 AT1G27370.5 50.450 111 51 2 110 220 143 249 4.73e-30 117
Msa0138950 AT1G27370.3 50.450 111 51 2 110 220 143 249 4.73e-30 117
Msa0138950 AT1G27370.2 50.450 111 51 2 110 220 143 249 4.73e-30 117
Msa0138950 AT1G27370.4 50.450 111 51 2 110 220 143 249 4.73e-30 117
Msa0138950 AT1G27370.7 50.450 111 51 2 110 220 143 249 4.73e-30 117
Msa0138950 AT1G27360.2 50.450 111 50 2 110 220 143 248 2.16e-28 112
Msa0138950 AT1G27360.1 50.450 111 50 2 110 220 143 248 2.16e-28 112
Msa0138950 AT1G27360.3 50.450 111 50 2 110 220 143 248 2.16e-28 112
Msa0138950 AT1G27360.4 50.450 111 50 2 110 220 143 248 2.16e-28 112
Msa0138950 AT2G42200.1 61.250 80 31 0 147 226 74 153 2.14e-27 109
Msa0138950 AT3G57920.1 65.000 80 28 0 141 220 53 132 2.41e-27 108
Msa0138950 AT5G18830.3 54.545 88 39 1 133 220 125 211 1.35e-23 100
Msa0138950 AT5G18830.2 54.545 88 39 1 133 220 125 211 1.48e-23 100
Msa0138950 AT5G18830.1 54.545 88 39 1 133 220 125 211 1.49e-23 100
Msa0138950 AT1G02065.2 68.750 48 15 0 147 194 188 235 1.29e-16 77.8

Find 108 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATGTGGATTGCTCTTAAT+TGG 0.197692 1_3:-72163660 Msa0138950:five_prime_UTR
TTAATTGTGAATTGTGATTA+TGG 0.233638 1_3:-72163483 Msa0138950:exon
GGATTGTTGGGGATGAATTA+AGG 0.244299 1_3:-72163608 Msa0138950:five_prime_UTR
CAACTATAGCCTAGAGGAAT+TGG 0.295642 1_3:-72161349 Msa0138950:CDS
AGATCTTGAGAAAGGGAATA+AGG 0.299596 1_3:-72163207 Msa0138950:CDS
GGGAATGGAATTTGAATGAT+TGG 0.316466 1_3:-72163379 Msa0138950:CDS
GCACTTAGCTTAAATCTTGC+AGG 0.340035 1_3:-72163122 Msa0138950:CDS
CTGGCAAGACATGCTAACTA+TGG 0.340843 1_3:-72161201 Msa0138950:three_prime_UTR
TCATTTGTTGGACTTCCATT+AGG 0.355984 1_3:+72161468 None:intergenic
TAGTTGTTGATTTGTGAAAT+TGG 0.356206 1_3:-72163721 Msa0138950:five_prime_UTR
AGTTTGTGAGATGCATTCTA+AGG 0.361547 1_3:-72162964 Msa0138950:CDS
CCCACTCCGGTCTGGGATCC+CGG 0.362139 1_3:-72163276 Msa0138950:CDS
AGTTTGCTTAGTTATAAATC+TGG 0.377878 1_3:-72161245 Msa0138950:three_prime_UTR
TAATTGTGAATTGTGATTAT+GGG 0.396686 1_3:-72163482 Msa0138950:exon
AATCAAGAAGCTGTTCCTAA+TGG 0.397811 1_3:-72161483 Msa0138950:CDS
CTAGTCTGATCATCATTTGT+TGG 0.400423 1_3:+72161456 None:intergenic
CCTGTACATAACTGATCCTT+TGG 0.405418 1_3:-72161283 Msa0138950:three_prime_UTR
AGATGCATTCTAAGGCTAGT+AGG 0.412881 1_3:-72162956 Msa0138950:CDS
TCATCTGATTTGAGTGGGAT+GGG 0.427804 1_3:-72163413 Msa0138950:CDS
TTCATCTGATTTGAGTGGGA+TGG 0.429528 1_3:-72163414 Msa0138950:CDS
TACTGTTGTACTTGATTATG+TGG 0.432479 1_3:-72163675 Msa0138950:five_prime_UTR
CAACAAGTGTGGCAGGCAAA+TGG 0.445930 1_3:+72163893 None:intergenic
CGGTCTGGGATCCCGGTGGT+TGG 0.446088 1_3:-72163269 Msa0138950:CDS
AGCTGTCGAAGACGCTTGGC+TGG 0.450145 1_3:-72161531 Msa0138950:CDS
AGATGTTATGTGGACGGAAA+CGG 0.452839 1_3:+72163919 None:intergenic
TTCGAATCGAGCTGTCTGTC+AGG 0.452984 1_3:-72163042 Msa0138950:CDS
GTGGGATGGGGAGGAGGTCA+AGG 0.453462 1_3:-72163400 Msa0138950:CDS
TATAGCTAGCCGTGTGAATC+CGG 0.453788 1_3:-72163336 Msa0138950:CDS
CGCAAACTCTCCGCCTGCAC+CGG 0.454733 1_3:+72163317 None:intergenic
TGTGATGGTATATTCTGTTA+TGG 0.462083 1_3:+72164025 None:intergenic
TCTGGGATCCCGGTGGTTGG+AGG 0.462646 1_3:-72163266 Msa0138950:CDS
TTTCCGTCCCTTTCCACAGC+CGG 0.462810 1_3:+72163089 None:intergenic
CATCTGATTTGAGTGGGATG+GGG 0.463932 1_3:-72163412 Msa0138950:CDS
ATAAGGAAGGGGATAGGAAA+AGG 0.467611 1_3:-72163190 Msa0138950:CDS
AAGGGAATAAGGAAGGGGAT+AGG 0.469713 1_3:-72163196 Msa0138950:CDS
ATTTGAGTGGGATGGGGAGG+AGG 0.473356 1_3:-72163406 Msa0138950:CDS
AGAGGAATTGGTTTGAAATG+AGG 0.473839 1_3:-72161337 Msa0138950:exon
CTTGAGAAAGGGAATAAGGA+AGG 0.476247 1_3:-72163203 Msa0138950:CDS
TGGGGAGGAGGTCAAGGGAA+TGG 0.478218 1_3:-72163394 Msa0138950:CDS
AGGGCTAATTGTTTGTGTTG+AGG 0.478623 1_3:-72163529 Msa0138950:five_prime_UTR
AGGACATGTTTCACCGGCTG+TGG 0.490256 1_3:-72163102 Msa0138950:CDS
ACTGATCCTTTGGTAGCTAC+AGG 0.490479 1_3:-72161273 Msa0138950:three_prime_UTR
TGTTTCACCGGCTGTGGAAA+GGG 0.493285 1_3:-72163096 Msa0138950:CDS
TAAGGCTAGTAGGGCTCTTG+TGG 0.497571 1_3:-72162946 Msa0138950:CDS
GGAATTTGAATGATTGGAGA+TGG 0.498797 1_3:-72163373 Msa0138950:CDS
GTCAGAGAGGTGAGGTTGAA+AGG 0.503268 1_3:+72163858 None:intergenic
ATGATGACGAAGAAGAATTA+CGG 0.505958 1_3:+72163956 None:intergenic
GAGAAGCTGTCGAAGACGCT+TGG 0.511016 1_3:-72161535 Msa0138950:CDS
GAGGAAGGAGATCTTGAGAA+AGG 0.514583 1_3:-72163215 Msa0138950:CDS
GTGGTTCATCTGATTTGAGT+GGG 0.514851 1_3:-72163418 Msa0138950:CDS
GGAGCATGAAGAAGACGTAT+TGG 0.515867 1_3:+72163238 None:intergenic
TAGCCGTGTGAATCCGGTGC+AGG 0.517976 1_3:-72163330 Msa0138950:CDS
CATTTCAAACCAATTCCTCT+AGG 0.520378 1_3:+72161340 None:intergenic
ATGTTTCACCGGCTGTGGAA+AGG 0.521156 1_3:-72163097 Msa0138950:CDS
CCAAAGGATCAGTTATGTAC+AGG 0.522084 1_3:+72161283 None:intergenic
TTTCTCAAGATCTCCTTCCT+CGG 0.522636 1_3:+72163217 None:intergenic
CAACCACCGGGATCCCAGAC+CGG 0.527167 1_3:+72163270 None:intergenic
GAAAAGGAGAGTTATTGTGC+TGG 0.529228 1_3:-72163174 Msa0138950:CDS
CCGGGATCCCAGACCGGAGT+GGG 0.530624 1_3:+72163276 None:intergenic
GCTTGGCTGGCCATAACAAA+CGG 0.533402 1_3:-72161518 Msa0138950:CDS
AGATCGGCAACAAGTGTGGC+AGG 0.534219 1_3:+72163886 None:intergenic
GAATTTGAATGATTGGAGAT+GGG 0.536595 1_3:-72163372 Msa0138950:CDS
GTTATTGTGCTGGAAGATGA+TGG 0.539294 1_3:-72163164 Msa0138950:CDS
CTGATTTGAGTGGGATGGGG+AGG 0.540249 1_3:-72163409 Msa0138950:CDS
AGGAAGGAGATCTTGAGAAA+GGG 0.547901 1_3:-72163214 Msa0138950:CDS
TTGGACGAACCTCCAACCAC+CGG 0.551797 1_3:+72163257 None:intergenic
TGAGAAAGGGAATAAGGAAG+GGG 0.552930 1_3:-72163201 Msa0138950:CDS
GATGCATTCTAAGGCTAGTA+GGG 0.556125 1_3:-72162955 Msa0138950:CDS
TGGGATGGGGAGGAGGTCAA+GGG 0.558672 1_3:-72163399 Msa0138950:CDS
TCTTCTTCATGCTCCGAGGA+AGG 0.558761 1_3:-72163230 Msa0138950:CDS
TTGAATGATTGGAGATGGGA+TGG 0.559506 1_3:-72163368 Msa0138950:CDS
AATTGTGAATTGTGATTATG+GGG 0.561310 1_3:-72163481 Msa0138950:exon
AAGGCTAGTAGGGCTCTTGT+GGG 0.562216 1_3:-72162945 Msa0138950:CDS
ATACTTCAAGAGTTCGATGA+AGG 0.564195 1_3:-72161561 Msa0138950:CDS
GTACTACTTTGAGCTCAGCT+AGG 0.565523 1_3:-72163757 Msa0138950:five_prime_UTR
CCGTGTGAATCCGGTGCAGG+CGG 0.578551 1_3:-72163327 Msa0138950:CDS
TGCAGATCTGAGTAGAGGTA+AGG 0.583887 1_3:-72163006 Msa0138950:CDS
TTGAGAAAGGGAATAAGGAA+GGG 0.585696 1_3:-72163202 Msa0138950:CDS
GGTGGTTCATCTGATTTGAG+TGG 0.587139 1_3:-72163419 Msa0138950:CDS
TGGGAGAGACAACGGTGTGA+TGG 0.587565 1_3:+72164010 None:intergenic
CAAATGGAGAAGATGTTATG+TGG 0.589422 1_3:+72163909 None:intergenic
TGGAGAAGATGTTATGTGGA+CGG 0.590392 1_3:+72163913 None:intergenic
AAGTAGATCGGCAACAAGTG+TGG 0.596325 1_3:+72163882 None:intergenic
TGGCAAGACATGCTAACTAT+GGG 0.600589 1_3:-72161200 Msa0138950:three_prime_UTR
TCTTGCAGGACATGTTTCAC+CGG 0.602620 1_3:-72163108 Msa0138950:CDS
TAACTTCCTGTAGCTACCAA+AGG 0.605045 1_3:+72161267 None:intergenic
TGGACGAACCTCCAACCACC+GGG 0.606579 1_3:+72163258 None:intergenic
AGACATGCTAACTATGGGAG+AGG 0.615647 1_3:-72161195 Msa0138950:three_prime_UTR
ATTGCTCTTAATTGGAACCA+TGG 0.616881 1_3:-72163652 Msa0138950:five_prime_UTR
GTCTGTCAGGTTGAAGACTG+TGG 0.617577 1_3:-72163029 Msa0138950:CDS
CTGGCCATAACAAACGGAGA+AGG 0.618872 1_3:-72161512 Msa0138950:CDS
TCACCGGCTGTGGAAAGGGA+CGG 0.619862 1_3:-72163092 Msa0138950:CDS
CAGGCGGAGAGTTTGCGAGT+GGG 0.622495 1_3:-72163311 Msa0138950:CDS
GAGAGAGGTGTACGTCAGAG+AGG 0.623693 1_3:+72163845 None:intergenic
CCGCCTGCACCGGATTCACA+CGG 0.624536 1_3:+72163327 None:intergenic
GCAGGCGGAGAGTTTGCGAG+TGG 0.624882 1_3:-72163312 Msa0138950:CDS
TTGTGGGAAATGCAATGCAG+AGG 0.630557 1_3:-72162929 Msa0138950:CDS
AGGTTGAAAGGAAAGTAGAT+CGG 0.643080 1_3:+72163870 None:intergenic
GATGGTTTGAATGATGAAGC+TGG 0.645206 1_3:-72163146 Msa0138950:CDS
TACGTCTTCTTCATGCTCCG+AGG 0.664152 1_3:-72163234 Msa0138950:CDS
ACCGGGATCCCAGACCGGAG+TGG 0.666079 1_3:+72163275 None:intergenic
TGTGGTGCAGATCTGAGTAG+AGG 0.668323 1_3:-72163011 Msa0138950:CDS
AGGTGTACGTCAGAGAGGTG+AGG 0.671365 1_3:+72163850 None:intergenic
AGAGCACACGGACACAACCA+TGG 0.676729 1_3:+72163635 None:intergenic
TCTTTGCAACTATAGCCTAG+AGG 0.681534 1_3:-72161355 Msa0138950:CDS
ACTCCGGTCTGGGATCCCGG+TGG 0.685385 1_3:-72163273 Msa0138950:CDS
ATTGTGAATTGTGATTATGG+GGG 0.703425 1_3:-72163480 Msa0138950:exon
GTGAAGTGTTGAACTGAGAG+AGG 0.726800 1_3:+72163830 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAAGTATGATTTTTTTA+AGG - chr1_3:72163256-72163275 Msa0138950:CDS 10.0%
!! AATACAAAATTATTGAATAA+AGG + chr1_3:72163539-72163558 None:intergenic 10.0%
!!! TTTTGTATTAATTTTTATGT+AGG - chr1_3:72163550-72163569 Msa0138950:five_prime_UTR 10.0%
!!! AAAATTTATTTTTTTTTGAG+AGG + chr1_3:72163579-72163598 None:intergenic 10.0%
!!! TTTATTGTTGTTTTTGTTTT+GGG + chr1_3:72161242-72161261 None:intergenic 15.0%
!!! TTTTATTGTTGTTTTTGTTT+TGG + chr1_3:72161243-72161262 None:intergenic 15.0%
!! TAAAAAATTAAAGGATAACA+AGG + chr1_3:72162905-72162924 None:intergenic 15.0%
!! TAAATAGTTAAGGATATAAT+AGG - chr1_3:72163138-72163157 Msa0138950:CDS 15.0%
!! AATTAACATTAATGTTTCAT+TGG - chr1_3:72163163-72163182 Msa0138950:CDS 15.0%
!!! TTGTATTTTAAGCTAAGTTT+AGG - chr1_3:72161681-72161700 Msa0138950:intron 20.0%
!!! TGTATTTTAAGCTAAGTTTA+GGG - chr1_3:72161682-72161701 Msa0138950:intron 20.0%
!! TTAATTGTGAATTGTGATTA+TGG - chr1_3:72161747-72161766 Msa0138950:intron 20.0%
!! TAATTGTGAATTGTGATTAT+GGG - chr1_3:72161748-72161767 Msa0138950:intron 20.0%
!!! GCTGAAAATTATCATTTTTA+TGG - chr1_3:72161784-72161803 Msa0138950:intron 20.0%
!!! AATTATCATTTTTATGGTGT+TGG - chr1_3:72161790-72161809 Msa0138950:intron 20.0%
!!! TTCAGATATTGATTACATTT+TGG + chr1_3:72162447-72162466 None:intergenic 20.0%
!! TGAATAATCAGTGTAAAATT+AGG - chr1_3:72162679-72162698 Msa0138950:intron 20.0%
!! GAATAATCAGTGTAAAATTA+GGG - chr1_3:72162680-72162699 Msa0138950:intron 20.0%
!! TTAAAAAAACGAAAGAGTTT+GGG + chr1_3:72162826-72162845 None:intergenic 20.0%
!! ATTAAAAAAACGAAAGAGTT+TGG + chr1_3:72162827-72162846 None:intergenic 20.0%
!!! ATTTATAACCTGATTTTGAT+GGG - chr1_3:72162947-72162966 Msa0138950:CDS 20.0%
!! CGCATATAAAATTAATTACA+TGG + chr1_3:72163029-72163048 None:intergenic 20.0%
!! TAAAAATCCATCATGATATT+AGG + chr1_3:72163508-72163527 None:intergenic 20.0%
!!! TAGTTGTTGATTTGTGAAAT+TGG - chr1_3:72161509-72161528 Msa0138950:CDS 25.0%
! AATTGTGAATTGTGATTATG+GGG - chr1_3:72161749-72161768 Msa0138950:intron 25.0%
!!! ATATTGATTACATTTTGGAG+CGG + chr1_3:72162442-72162461 None:intergenic 25.0%
!! CATTTATAACCTGATTTTGA+TGG - chr1_3:72162946-72162965 Msa0138950:CDS 25.0%
! ACAAAATTGCCCTTAATAAA+TGG - chr1_3:72163072-72163091 Msa0138950:CDS 25.0%
! TTTGCCATACCATTTATTAA+GGG + chr1_3:72163084-72163103 None:intergenic 25.0%
!! TTTTGCCATACCATTTATTA+AGG + chr1_3:72163085-72163104 None:intergenic 25.0%
! GAGAGAGTAATAAATAGTTA+AGG - chr1_3:72163128-72163147 Msa0138950:CDS 25.0%
! TTGTAAAGCGACATATAATT+TGG - chr1_3:72163188-72163207 Msa0138950:CDS 25.0%
! TGTAAAGCGACATATAATTT+GGG - chr1_3:72163189-72163208 Msa0138950:CDS 25.0%
! GAGTATTTATTGTATCTTGT+TGG - chr1_3:72163330-72163349 Msa0138950:CDS 25.0%
!! AGTTTGCTTAGTTATAAATC+TGG - chr1_3:72163985-72164004 Msa0138950:five_prime_UTR 25.0%
TGTGATGGTATATTCTGTTA+TGG + chr1_3:72161208-72161227 None:intergenic 30.0%
! ATGATGACGAAGAAGAATTA+CGG + chr1_3:72161277-72161296 None:intergenic 30.0%
TACTGTTGTACTTGATTATG+TGG - chr1_3:72161555-72161574 Msa0138950:CDS 30.0%
! TTATGTGGATTGCTCTTAAT+TGG - chr1_3:72161570-72161589 Msa0138950:CDS 30.0%
ATTGTGAATTGTGATTATGG+GGG - chr1_3:72161750-72161769 Msa0138950:intron 30.0%
!! TATCATTTTTATGGTGTTGG+TGG - chr1_3:72161793-72161812 Msa0138950:intron 30.0%
GAATTTGAATGATTGGAGAT+GGG - chr1_3:72161858-72161877 Msa0138950:intron 30.0%
AACAGAAAGCAATCAATAAG+AGG + chr1_3:72162358-72162377 None:intergenic 30.0%
!!! ATTGCTTTCTGTTTTTGCTT+TGG - chr1_3:72162365-72162384 Msa0138950:intron 30.0%
!! GTTGATAGTTATGTGTGTAT+AGG - chr1_3:72162387-72162406 Msa0138950:intron 30.0%
CTGAAAATCTATGTTGTTGA+TGG - chr1_3:72162462-72162481 Msa0138950:intron 30.0%
TTATATAGAGAGATCTCACA+TGG + chr1_3:72162607-72162626 None:intergenic 30.0%
AAAATTGGGTTTGTCTAACT+GGG - chr1_3:72162737-72162756 Msa0138950:intron 30.0%
ATTAAAGGATAACAAGGACT+TGG + chr1_3:72162899-72162918 None:intergenic 30.0%
ATTGCCCTTAATAAATGGTA+TGG - chr1_3:72163077-72163096 Msa0138950:CDS 30.0%
TTTCCAAAGCGACATATAAT+TGG - chr1_3:72163222-72163241 Msa0138950:CDS 30.0%
TTCCAAAGCGACATATAATT+GGG - chr1_3:72163223-72163242 Msa0138950:CDS 30.0%
TAAAATATGCTACAGCAGTA+TGG + chr1_3:72163414-72163433 None:intergenic 30.0%
! ATACTGCTGTAGCATATTTT+AGG - chr1_3:72163413-72163432 Msa0138950:CDS 30.0%
!!! ATATTTTAGGTTTGGTGCTA+TGG - chr1_3:72163426-72163445 Msa0138950:CDS 30.0%
!!! TATTTTAGGTTTGGTGCTAT+GGG - chr1_3:72163427-72163446 Msa0138950:CDS 30.0%
!! GCTAACTTGTTAATAACAGA+TGG + chr1_3:72163456-72163475 None:intergenic 30.0%
AATACTGCCTAATATCATGA+TGG - chr1_3:72163498-72163517 Msa0138950:five_prime_UTR 30.0%
!! ATCGCAGTTGTATTTTTAAC+TGG - chr1_3:72164010-72164029 Msa0138950:five_prime_UTR 30.0%
!!! TTTTGTTTTGGGAGAGACAA+CGG + chr1_3:72161231-72161250 None:intergenic 35.0%
CAAATGGAGAAGATGTTATG+TGG + chr1_3:72161324-72161343 None:intergenic 35.0%
AGGTTGAAAGGAAAGTAGAT+CGG + chr1_3:72161363-72161382 None:intergenic 35.0%
ATTGCTCTTAATTGGAACCA+TGG - chr1_3:72161578-72161597 Msa0138950:intron 35.0%
! AACAATCCAAAAAGAGCACA+CGG + chr1_3:72161610-72161629 None:intergenic 35.0%
! TGTGCTCTTTTTGGATTGTT+GGG - chr1_3:72161610-72161629 Msa0138950:intron 35.0%
GGGAATGGAATTTGAATGAT+TGG - chr1_3:72161851-72161870 Msa0138950:intron 35.0%
GGAATTTGAATGATTGGAGA+TGG - chr1_3:72161857-72161876 Msa0138950:intron 35.0%
AGATCTTGAGAAAGGGAATA+AGG - chr1_3:72162023-72162042 Msa0138950:intron 35.0%
TTGAGAAAGGGAATAAGGAA+GGG - chr1_3:72162028-72162047 Msa0138950:intron 35.0%
AGTTTGTGAGATGCATTCTA+AGG - chr1_3:72162266-72162285 Msa0138950:intron 35.0%
CAAAATTGGGTTTGTCTAAC+TGG - chr1_3:72162736-72162755 Msa0138950:intron 35.0%
!! TAACCTGATTTTGATGGGAA+AGG - chr1_3:72162952-72162971 Msa0138950:CDS 35.0%
AAACGTCAGATAATTTGGGA+CGG + chr1_3:72163003-72163022 None:intergenic 35.0%
! TCCCAAATTATCTGACGTTT+TGG - chr1_3:72163003-72163022 Msa0138950:CDS 35.0%
GCCAAAACGTCAGATAATTT+GGG + chr1_3:72163007-72163026 None:intergenic 35.0%
AAAGCGACATATAATTGGGA+CGG - chr1_3:72163227-72163246 Msa0138950:CDS 35.0%
!!! GCTGTAGCATATTTTAGGTT+TGG - chr1_3:72163418-72163437 Msa0138950:CDS 35.0%
AGTATGTGAAACCTGTTGAT+GGG + chr1_3:72163654-72163673 None:intergenic 35.0%
AAGTATGTGAAACCTGTTGA+TGG + chr1_3:72163655-72163674 None:intergenic 35.0%
ATACTTCAAGAGTTCGATGA+AGG - chr1_3:72163669-72163688 Msa0138950:five_prime_UTR 35.0%
!! TTTTCCTTCTCCGTTTGTTA+TGG + chr1_3:72163725-72163744 None:intergenic 35.0%
AATCAAGAAGCTGTTCCTAA+TGG - chr1_3:72163747-72163766 Msa0138950:five_prime_UTR 35.0%
! TCATTTGTTGGACTTCCATT+AGG + chr1_3:72163765-72163784 None:intergenic 35.0%
CTAGTCTGATCATCATTTGT+TGG + chr1_3:72163777-72163796 None:intergenic 35.0%
CATTTCAAACCAATTCCTCT+AGG + chr1_3:72163893-72163912 None:intergenic 35.0%
!! AGAGGAATTGGTTTGAAATG+AGG - chr1_3:72163893-72163912 Msa0138950:five_prime_UTR 35.0%
AGATGTTATGTGGACGGAAA+CGG + chr1_3:72161314-72161333 None:intergenic 40.0%
TGGAGAAGATGTTATGTGGA+CGG + chr1_3:72161320-72161339 None:intergenic 40.0%
! GTGTGCTCTTTTTGGATTGT+TGG - chr1_3:72161609-72161628 Msa0138950:intron 40.0%
! GTGCTCTTTTTGGATTGTTG+GGG - chr1_3:72161611-72161630 Msa0138950:intron 40.0%
GGATTGTTGGGGATGAATTA+AGG - chr1_3:72161622-72161641 Msa0138950:intron 40.0%
AGGGCTAATTGTTTGTGTTG+AGG - chr1_3:72161701-72161720 Msa0138950:intron 40.0%
GAATTGTGATTATGGGGGAA+AGG - chr1_3:72161755-72161774 Msa0138950:intron 40.0%
! GTGGTTCATCTGATTTGAGT+GGG - chr1_3:72161812-72161831 Msa0138950:intron 40.0%
! TTCATCTGATTTGAGTGGGA+TGG - chr1_3:72161816-72161835 Msa0138950:intron 40.0%
! TCATCTGATTTGAGTGGGAT+GGG - chr1_3:72161817-72161836 Msa0138950:intron 40.0%
TTGAATGATTGGAGATGGGA+TGG - chr1_3:72161862-72161881 Msa0138950:intron 40.0%
TTTCTCAAGATCTCCTTCCT+CGG + chr1_3:72162016-72162035 None:intergenic 40.0%
AGGAAGGAGATCTTGAGAAA+GGG - chr1_3:72162016-72162035 Msa0138950:intron 40.0%
CTTGAGAAAGGGAATAAGGA+AGG - chr1_3:72162027-72162046 Msa0138950:intron 40.0%
TGAGAAAGGGAATAAGGAAG+GGG - chr1_3:72162029-72162048 Msa0138950:intron 40.0%
ATAAGGAAGGGGATAGGAAA+AGG - chr1_3:72162040-72162059 Msa0138950:intron 40.0%
GAAAAGGAGAGTTATTGTGC+TGG - chr1_3:72162056-72162075 Msa0138950:intron 40.0%
GTTATTGTGCTGGAAGATGA+TGG - chr1_3:72162066-72162085 Msa0138950:intron 40.0%
GATGGTTTGAATGATGAAGC+TGG - chr1_3:72162084-72162103 Msa0138950:intron 40.0%
GCACTTAGCTTAAATCTTGC+AGG - chr1_3:72162108-72162127 Msa0138950:intron 40.0%
!! AGATGCATTCTAAGGCTAGT+AGG - chr1_3:72162274-72162293 Msa0138950:intron 40.0%
!! GATGCATTCTAAGGCTAGTA+GGG - chr1_3:72162275-72162294 Msa0138950:intron 40.0%
!! GGTTTTGTCAACAGTGTAGT+AGG - chr1_3:72162322-72162341 Msa0138950:intron 40.0%
CATGGCAAACTTTCGAACAA+TGG + chr1_3:72162589-72162608 None:intergenic 40.0%
! AGCGAGCATAGTTTGTATGT+CGG + chr1_3:72162657-72162676 None:intergenic 40.0%
! ACAAACCCAATTTTGCACCA+GGG + chr1_3:72162731-72162750 None:intergenic 40.0%
TAACCCTCCTCAGGAAAAAT+GGG + chr1_3:72162784-72162803 None:intergenic 40.0%
ATAACCCTCCTCAGGAAAAA+TGG + chr1_3:72162785-72162804 None:intergenic 40.0%
! TTTTTCCTGAGGAGGGTTAT+TGG - chr1_3:72162785-72162804 Msa0138950:intron 40.0%
TGTCCTTTCCCATCAAAATC+AGG + chr1_3:72162958-72162977 None:intergenic 40.0%
GGCCAAAACGTCAGATAATT+TGG + chr1_3:72163008-72163027 None:intergenic 40.0%
! GTCCCAATTATATGTCGCTT+TGG + chr1_3:72163228-72163247 None:intergenic 40.0%
AATATGCTACAGCAGTATGG+CGG + chr1_3:72163411-72163430 None:intergenic 40.0%
! CATTCTTTTACCCCATCAAC+AGG - chr1_3:72163640-72163659 Msa0138950:five_prime_UTR 40.0%
GTATGTGAAACCTGTTGATG+GGG + chr1_3:72163653-72163672 None:intergenic 40.0%
TCTTTGCAACTATAGCCTAG+AGG - chr1_3:72163875-72163894 Msa0138950:five_prime_UTR 40.0%
CAACTATAGCCTAGAGGAAT+TGG - chr1_3:72163881-72163900 Msa0138950:five_prime_UTR 40.0%
CCAAAGGATCAGTTATGTAC+AGG + chr1_3:72163950-72163969 None:intergenic 40.0%
CCTGTACATAACTGATCCTT+TGG - chr1_3:72163947-72163966 Msa0138950:five_prime_UTR 40.0%
TAACTTCCTGTAGCTACCAA+AGG + chr1_3:72163966-72163985 None:intergenic 40.0%
TGGCAAGACATGCTAACTAT+GGG - chr1_3:72164030-72164049 Msa0138950:five_prime_UTR 40.0%
AAGTAGATCGGCAACAAGTG+TGG + chr1_3:72161351-72161370 None:intergenic 45.0%
!! GTGAAGTGTTGAACTGAGAG+AGG + chr1_3:72161403-72161422 None:intergenic 45.0%
GTACTACTTTGAGCTCAGCT+AGG - chr1_3:72161473-72161492 Msa0138950:CDS 45.0%
! TTGTGTCCGTGTGCTCTTTT+TGG - chr1_3:72161601-72161620 Msa0138950:intron 45.0%
TGTGATTATGGGGGAAAGGT+TGG - chr1_3:72161759-72161778 Msa0138950:intron 45.0%
GTGATTATGGGGGAAAGGTT+GGG - chr1_3:72161760-72161779 Msa0138950:intron 45.0%
! GGTGGTTCATCTGATTTGAG+TGG - chr1_3:72161811-72161830 Msa0138950:intron 45.0%
! CATCTGATTTGAGTGGGATG+GGG - chr1_3:72161818-72161837 Msa0138950:intron 45.0%
TATAGCTAGCCGTGTGAATC+CGG - chr1_3:72161894-72161913 Msa0138950:intron 45.0%
! GACAACAGTTTTTCCCACTC+CGG - chr1_3:72161941-72161960 Msa0138950:intron 45.0%
GGAGCATGAAGAAGACGTAT+TGG + chr1_3:72161995-72162014 None:intergenic 45.0%
GAGGAAGGAGATCTTGAGAA+AGG - chr1_3:72162015-72162034 Msa0138950:intron 45.0%
AAGGGAATAAGGAAGGGGAT+AGG - chr1_3:72162034-72162053 Msa0138950:intron 45.0%
TCTTGCAGGACATGTTTCAC+CGG - chr1_3:72162122-72162141 Msa0138950:intron 45.0%
GGAAAAAAGAGCAGAGTAGC+TGG - chr1_3:72162159-72162178 Msa0138950:intron 45.0%
AAAAAGAGCAGAGTAGCTGG+AGG - chr1_3:72162162-72162181 Msa0138950:intron 45.0%
TGCAGATCTGAGTAGAGGTA+AGG - chr1_3:72162224-72162243 Msa0138950:intron 45.0%
TTGTGGGAAATGCAATGCAG+AGG - chr1_3:72162301-72162320 Msa0138950:intron 45.0%
ACTACACTATTCCGCTATCG+CGG + chr1_3:72162490-72162509 None:intergenic 45.0%
!! CGATAGCGGAATAGTGTAGT+GGG - chr1_3:72162490-72162509 Msa0138950:intron 45.0%
TGGGTCAGGGTTTGAAGAAA+TGG - chr1_3:72162509-72162528 Msa0138950:intron 45.0%
TTCGAACAATGGCACATTGC+AGG + chr1_3:72162578-72162597 None:intergenic 45.0%
! GACAAACCCAATTTTGCACC+AGG + chr1_3:72162732-72162751 None:intergenic 45.0%
!! TTCCTCTCCCATTTTTCCTG+AGG - chr1_3:72162774-72162793 Msa0138950:intron 45.0%
!! TCTCCCATTTTTCCTGAGGA+GGG - chr1_3:72162778-72162797 Msa0138950:intron 45.0%
AACGAAAGAGTTTGGGCTGT+GGG + chr1_3:72162819-72162838 None:intergenic 45.0%
AAACGAAAGAGTTTGGGCTG+TGG + chr1_3:72162820-72162839 None:intergenic 45.0%
! GTCAGATAATTTGGGACGGA+GGG + chr1_3:72162999-72163018 None:intergenic 45.0%
CGACATATAATTGGGACGGA+GGG - chr1_3:72163231-72163250 Msa0138950:CDS 45.0%
!! ACTGTTAGTCTTCGCAACAG+CGG - chr1_3:72163373-72163392 Msa0138950:CDS 45.0%
! ACTGATCCTTTGGTAGCTAC+AGG - chr1_3:72163957-72163976 Msa0138950:five_prime_UTR 45.0%
CTGGCAAGACATGCTAACTA+TGG - chr1_3:72164029-72164048 Msa0138950:five_prime_UTR 45.0%
AGACATGCTAACTATGGGAG+AGG - chr1_3:72164035-72164054 Msa0138950:five_prime_UTR 45.0%
!! AATTAGAATTAAAAAATTAA+AGG + chr1_3:72162914-72162933 None:intergenic 5.0%
CAACAAGTGTGGCAGGCAAA+TGG + chr1_3:72161340-72161359 None:intergenic 50.0%
GTCAGAGAGGTGAGGTTGAA+AGG + chr1_3:72161375-72161394 None:intergenic 50.0%
! AGTTTTTCCCACTCCGGTCT+GGG - chr1_3:72161947-72161966 Msa0138950:intron 50.0%
TACGTCTTCTTCATGCTCCG+AGG - chr1_3:72161996-72162015 Msa0138950:intron 50.0%
TCTTCTTCATGCTCCGAGGA+AGG - chr1_3:72162000-72162019 Msa0138950:intron 50.0%
! ATGTTTCACCGGCTGTGGAA+AGG - chr1_3:72162133-72162152 Msa0138950:intron 50.0%
! TGTTTCACCGGCTGTGGAAA+GGG - chr1_3:72162134-72162153 Msa0138950:intron 50.0%
TTCGAATCGAGCTGTCTGTC+AGG - chr1_3:72162188-72162207 Msa0138950:intron 50.0%
!! GTCTGTCAGGTTGAAGACTG+TGG - chr1_3:72162201-72162220 Msa0138950:intron 50.0%
TGTGGTGCAGATCTGAGTAG+AGG - chr1_3:72162219-72162238 Msa0138950:intron 50.0%
TAAGGCTAGTAGGGCTCTTG+TGG - chr1_3:72162284-72162303 Msa0138950:intron 50.0%
AAGGCTAGTAGGGCTCTTGT+GGG - chr1_3:72162285-72162304 Msa0138950:intron 50.0%
!! GCGATAGCGGAATAGTGTAG+TGG - chr1_3:72162489-72162508 Msa0138950:intron 50.0%
!! CGGAATAGTGTAGTGGGTCA+GGG - chr1_3:72162496-72162515 Msa0138950:intron 50.0%
! ATTTTGCACCAGGGATGCGT+AGG + chr1_3:72162722-72162741 None:intergenic 50.0%
ACGCATCCCTGGTGCAAAAT+TGG - chr1_3:72162722-72162741 Msa0138950:intron 50.0%
CGCATCCCTGGTGCAAAATT+GGG - chr1_3:72162723-72162742 Msa0138950:intron 50.0%
GGAGAGGAACTGCACATGTT+TGG + chr1_3:72162763-72162782 None:intergenic 50.0%
CTCCTCAGGAAAAATGGGAG+AGG + chr1_3:72162779-72162798 None:intergenic 50.0%
!! CTCTCCCATTTTTCCTGAGG+AGG - chr1_3:72162777-72162796 Msa0138950:intron 50.0%
! CGTCAGATAATTTGGGACGG+AGG + chr1_3:72163000-72163019 None:intergenic 50.0%
GCGACATATAATTGGGACGG+AGG - chr1_3:72163230-72163249 Msa0138950:CDS 50.0%
TCTTCGCAACAGCGGTTATC+CGG - chr1_3:72163381-72163400 Msa0138950:CDS 50.0%
! GCTTGGCTGGCCATAACAAA+CGG - chr1_3:72163712-72163731 Msa0138950:five_prime_UTR 50.0%
CTGGCCATAACAAACGGAGA+AGG - chr1_3:72163718-72163737 Msa0138950:five_prime_UTR 50.0%
TGGGAGAGACAACGGTGTGA+TGG + chr1_3:72161223-72161242 None:intergenic 55.0%
AGATCGGCAACAAGTGTGGC+AGG + chr1_3:72161347-72161366 None:intergenic 55.0%
AGGTGTACGTCAGAGAGGTG+AGG + chr1_3:72161383-72161402 None:intergenic 55.0%
! GAGAGAGGTGTACGTCAGAG+AGG + chr1_3:72161388-72161407 None:intergenic 55.0%
AGAGCACACGGACACAACCA+TGG + chr1_3:72161598-72161617 None:intergenic 55.0%
! CTGATTTGAGTGGGATGGGG+AGG - chr1_3:72161821-72161840 Msa0138950:intron 55.0%
ATTTGAGTGGGATGGGGAGG+AGG - chr1_3:72161824-72161843 Msa0138950:intron 55.0%
! CAGTTTTTCCCACTCCGGTC+TGG - chr1_3:72161946-72161965 Msa0138950:intron 55.0%
TTGGACGAACCTCCAACCAC+CGG + chr1_3:72161976-72161995 None:intergenic 55.0%
! AGGACATGTTTCACCGGCTG+TGG - chr1_3:72162128-72162147 Msa0138950:intron 55.0%
TTTCCGTCCCTTTCCACAGC+CGG + chr1_3:72162144-72162163 None:intergenic 55.0%
!! GCGGAATAGTGTAGTGGGTC+AGG - chr1_3:72162495-72162514 Msa0138950:intron 55.0%
ATGTCGTGTGCAAGAGAGCG+AGG + chr1_3:72162535-72162554 None:intergenic 55.0%
ACAATGGCACATTGCAGGCG+CGG + chr1_3:72162573-72162592 None:intergenic 55.0%
AGGGATGCGTAGGCTATGAC+AGG + chr1_3:72162712-72162731 None:intergenic 55.0%
TGTCATAGCCTACGCATCCC+TGG - chr1_3:72162711-72162730 Msa0138950:intron 55.0%
TGAGGCCAATAACCCTCCTC+AGG + chr1_3:72162793-72162812 None:intergenic 55.0%
!! ACAGCAGTATGGCGGATAGC+CGG + chr1_3:72163403-72163422 None:intergenic 55.0%
GAGAAGCTGTCGAAGACGCT+TGG - chr1_3:72163695-72163714 Msa0138950:five_prime_UTR 55.0%
TGGGATGGGGAGGAGGTCAA+GGG - chr1_3:72161831-72161850 Msa0138950:intron 60.0%
TGGGGAGGAGGTCAAGGGAA+TGG - chr1_3:72161836-72161855 Msa0138950:intron 60.0%
TAGCCGTGTGAATCCGGTGC+AGG - chr1_3:72161900-72161919 Msa0138950:intron 60.0%
CAGGCGGAGAGTTTGCGAGT+GGG - chr1_3:72161919-72161938 Msa0138950:intron 60.0%
TGGACGAACCTCCAACCACC+GGG + chr1_3:72161975-72161994 None:intergenic 60.0%
! TCACCGGCTGTGGAAAGGGA+CGG - chr1_3:72162138-72162157 Msa0138950:intron 60.0%
!! TGTTGATGGCGCCGCGATAG+CGG - chr1_3:72162476-72162495 Msa0138950:intron 60.0%
AATGGCACATTGCAGGCGCG+GGG + chr1_3:72162571-72162590 None:intergenic 60.0%
CAATGGCACATTGCAGGCGC+GGG + chr1_3:72162572-72162591 None:intergenic 60.0%
AGTTTGGGCTGTGGGTCGTG+AGG + chr1_3:72162811-72162830 None:intergenic 60.0%
AGCTGTCGAAGACGCTTGGC+TGG - chr1_3:72163699-72163718 Msa0138950:five_prime_UTR 60.0%
GTGGGATGGGGAGGAGGTCA+AGG - chr1_3:72161830-72161849 Msa0138950:intron 65.0%
CCGCCTGCACCGGATTCACA+CGG + chr1_3:72161906-72161925 None:intergenic 65.0%
CCGTGTGAATCCGGTGCAGG+CGG - chr1_3:72161903-72161922 Msa0138950:intron 65.0%
CGCAAACTCTCCGCCTGCAC+CGG + chr1_3:72161916-72161935 None:intergenic 65.0%
GCAGGCGGAGAGTTTGCGAG+TGG - chr1_3:72161918-72161937 Msa0138950:intron 65.0%
CAACCACCGGGATCCCAGAC+CGG + chr1_3:72161963-72161982 None:intergenic 65.0%
! TCTGGGATCCCGGTGGTTGG+AGG - chr1_3:72161964-72161983 Msa0138950:intron 65.0%
CCGGGATCCCAGACCGGAGT+GGG + chr1_3:72161957-72161976 None:intergenic 70.0%
! CCCACTCCGGTCTGGGATCC+CGG - chr1_3:72161954-72161973 Msa0138950:intron 70.0%
ACCGGGATCCCAGACCGGAG+TGG + chr1_3:72161958-72161977 None:intergenic 70.0%
! ACTCCGGTCTGGGATCCCGG+TGG - chr1_3:72161957-72161976 Msa0138950:intron 70.0%
! CGGTCTGGGATCCCGGTGGT+TGG - chr1_3:72161961-72161980 Msa0138950:intron 70.0%
ACATTGCAGGCGCGGGGAGG+GGG + chr1_3:72162565-72162584 None:intergenic 70.0%
CACATTGCAGGCGCGGGGAG+GGG + chr1_3:72162566-72162585 None:intergenic 70.0%
GCACATTGCAGGCGCGGGGA+GGG + chr1_3:72162567-72162586 None:intergenic 70.0%
GGCACATTGCAGGCGCGGGG+AGG + chr1_3:72162568-72162587 None:intergenic 75.0%
! TTGCAGGCGCGGGGAGGGGG+AGG + chr1_3:72162562-72162581 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 72161180 72164072 72161180 ID=Msa0138950;Name=Msa0138950
chr1_3 mRNA 72161180 72164072 72161180 ID=Msa0138950-mRNA-1;Parent=Msa0138950;Name=Msa0138950-mRNA-1;_AED=0.02;_eAED=0.02;_QI=586|1|1|1|1|1|2|164|274
chr1_3 exon 72161180 72161590 72161180 ID=Msa0138950-mRNA-1:exon:25154;Parent=Msa0138950-mRNA-1
chr1_3 exon 72162909 72164072 72162909 ID=Msa0138950-mRNA-1:exon:25153;Parent=Msa0138950-mRNA-1
chr1_3 five_prime_UTR 72163487 72164072 72163487 ID=Msa0138950-mRNA-1:five_prime_utr;Parent=Msa0138950-mRNA-1
chr1_3 CDS 72162909 72163486 72162909 ID=Msa0138950-mRNA-1:cds;Parent=Msa0138950-mRNA-1
chr1_3 CDS 72161344 72161590 72161344 ID=Msa0138950-mRNA-1:cds;Parent=Msa0138950-mRNA-1
chr1_3 three_prime_UTR 72161180 72161343 72161180 ID=Msa0138950-mRNA-1:three_prime_utr;Parent=Msa0138950-mRNA-1
Gene Sequence

>Msa0138950

ATGGGGGAAAGGTTGGGTGCTGAAAATTATCATTTTTATGGTGTTGGTGGTTCATCTGATTTGAGTGGGATGGGGAGGAGGTCAAGGGAATGGAATTTGAATGATTGGAGATGGGATGGTGATTTGTTTATAGCTAGCCGTGTGAATCCGGTGCAGGCGGAGAGTTTGCGAGTGGGACAACAGTTTTTCCCACTCCGGTCTGGGATCCCGGTGGTTGGAGGTTCGTCCAATACGTCTTCTTCATGCTCCGAGGAAGGAGATCTTGAGAAAGGGAATAAGGAAGGGGATAGGAAAAGGAGAGTTATTGTGCTGGAAGATGATGGTTTGAATGATGAAGCTGGTGCACTTAGCTTAAATCTTGCAGGACATGTTTCACCGGCTGTGGAAAGGGACGGAAAAAAGAGCAGAGTAGCTGGAGGAACTTCGAATCGAGCTGTCTGTCAGGTTGAAGACTGTGGTGCAGATCTGAGTAGAGGTAAGGATTATCACAGACGTCATAAAGTTTGTGAGATGCATTCTAAGGCTAGTAGGGCTCTTGTGGGAAATGCAATGCAGAGGTTTTGTCAACAGTGTAGTAGGTTTCACATACTTCAAGAGTTCGATGAAGGAAAGAGAAGCTGTCGAAGACGCTTGGCTGGCCATAACAAACGGAGAAGGAAAACAAATCAAGAAGCTGTTCCTAATGGAAGTCCAACAAATGATGATCAGACTAGTAGTTATCTGTTGATTAGTTTATTGAAGATACTTTCAAATATGCATTGTGAGTTTTTCTATATTTCTTTAAATCATTATCTTTGCAACTATAGCCTAGAGGAATTGGTTTGA
Protein sequence

>Msa0138950

MGERLGAENYHFYGVGGSSDLSGMGRRSREWNLNDWRWDGDLFIASRVNPVQAESLRVGQQFFPLRSGIPVVGGSSNTSSSCSEEGDLEKGNKEGDRKRRVIVLEDDGLNDEAGALSLNLAGHVSPAVERDGKKSRVAGGTSNRAVCQVEDCGADLSRGKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHILQEFDEGKRSCRRRLAGHNKRRRKTNQEAVPNGSPTNDDQTSSYLLISLLKILSNMHCEFFYISLNHYLCNYSLEELV*