AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1445030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1445030 MtrunA17_Chr1g0182481 98.662 897 11 1 1 896 1 897 0.0 1843
Msa1445030 MtrunA17_Chr7g0265211 53.846 468 194 6 445 892 482 947 3.74e-170 519
Msa1445030 MtrunA17_Chr7g0265211 28.492 358 220 11 27 364 19 360 1.57e-19 94.4
Msa1445030 MtrunA17_Chr1g0179841 51.860 457 199 5 456 892 347 802 1.97e-153 471
Msa1445030 MtrunA17_Chr4g0028111 39.093 463 218 9 458 862 102 558 1.56e-97 318
Msa1445030 MtrunA17_Chr2g0320451 36.750 517 262 11 253 712 226 734 2.05e-93 317
Msa1445030 MtrunA17_Chr2g0320451 54.211 190 77 4 712 892 835 1023 3.29e-54 204
Msa1445030 MtrunA17_Chr4g0025251 35.262 553 256 14 429 890 158 699 7.04e-92 306
Msa1445030 MtrunA17_Chr4g0027811 33.786 515 249 9 398 890 132 576 1.60e-85 285
Msa1445030 MtrunA17_Chr1g0205451 29.909 438 240 10 476 892 621 1012 4.50e-51 195
Msa1445030 MtrunA17_Chr7g0270101 29.327 416 231 12 494 891 417 787 9.14e-47 180
Msa1445030 MtrunA17_Chr5g0430361 28.235 425 240 10 486 892 680 1057 6.49e-46 179
Msa1445030 MtrunA17_Chr2g0316251 29.665 418 223 16 494 890 797 1164 4.81e-45 176
Msa1445030 MtrunA17_Chr3g0105291 27.556 450 262 10 444 874 587 991 5.14e-42 166
Msa1445030 MtrunA17_Chr5g0407251 25.745 470 240 15 477 891 4 419 1.34e-41 158
Msa1445030 MtrunA17_Chr1g0182221 51.449 138 67 0 241 378 389 526 1.76e-41 160
Msa1445030 MtrunA17_Chr5g0407211 25.319 470 242 15 477 891 4 419 5.01e-41 156
Msa1445030 MtrunA17_Chr1g0185491 28.471 425 241 13 487 892 840 1220 1.55e-40 162
Msa1445030 MtrunA17_Chr4g0030901 45.324 139 75 1 240 378 305 442 1.10e-37 147
Msa1445030 MtrunA17_Chr3g0134821 26.992 389 228 11 494 866 459 807 8.82e-37 149
Msa1445030 MtrunA17_Chr7g0222931 48.485 132 68 0 239 370 390 521 1.41e-34 139
Msa1445030 MtrunA17_Chr3g0134811 26.857 350 195 10 550 887 491 791 1.49e-33 139
Msa1445030 MtrunA17_Chr3g0134851 24.306 432 198 11 497 888 128 470 9.26e-28 118
Msa1445030 MtrunA17_Chr2g0320431 36.697 109 64 1 253 356 23 131 3.50e-16 80.1
Msa1445030 MtrunA17_Chr7g0259981 24.915 293 166 10 640 896 22 296 2.30e-15 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1445030 AT2G37520.1 54.374 903 313 16 1 892 1 815 0.0 948
Msa1445030 AT3G53680.1 51.313 914 340 17 1 892 1 831 0.0 879
Msa1445030 AT3G53680.2 51.366 915 340 17 1 892 1 833 0.0 879
Msa1445030 AT2G36720.1 40.193 724 357 13 246 894 253 975 2.43e-165 508
Msa1445030 AT2G36720.2 40.193 724 357 13 246 894 253 975 2.43e-165 508
Msa1445030 AT2G27980.1 36.390 698 386 10 246 894 371 1059 1.52e-143 453
Msa1445030 AT4G14920.3 27.854 438 236 12 482 894 603 985 8.42e-49 188
Msa1445030 AT4G14920.2 27.854 438 236 12 482 894 603 985 8.48e-49 188
Msa1445030 AT4G14920.1 27.854 438 236 12 482 894 603 985 8.48e-49 188
Msa1445030 AT5G58610.4 30.266 413 234 11 495 892 404 777 4.58e-45 176
Msa1445030 AT5G58610.8 30.266 413 234 11 495 892 635 1008 4.78e-45 176
Msa1445030 AT5G58610.2 30.266 413 234 11 495 892 635 1008 4.78e-45 176
Msa1445030 AT5G58610.7 30.266 413 234 11 495 892 626 999 5.28e-45 176
Msa1445030 AT5G58610.3 30.266 413 234 11 495 892 635 1008 5.46e-45 176
Msa1445030 AT5G58610.5 30.266 413 234 11 495 892 626 999 6.42e-45 176
Msa1445030 AT3G14980.6 29.384 422 231 13 489 892 651 1023 8.85e-44 172
Msa1445030 AT3G14980.1 29.384 422 231 13 489 892 651 1023 8.85e-44 172
Msa1445030 AT3G14980.2 29.384 422 231 13 489 892 651 1023 8.85e-44 172
Msa1445030 AT3G14980.5 29.384 422 231 13 489 892 606 978 1.02e-43 172
Msa1445030 AT3G14980.3 29.117 419 236 12 489 892 651 1023 1.72e-43 171
Msa1445030 AT1G05380.3 29.691 421 236 10 486 890 547 923 2.40e-42 168
Msa1445030 AT1G05380.1 29.691 421 236 10 486 890 547 923 2.40e-42 168
Msa1445030 AT1G05380.2 29.691 421 236 10 486 890 547 923 2.40e-42 168
Msa1445030 AT5G58610.1 29.298 413 212 12 495 892 626 973 1.51e-39 159
Msa1445030 AT5G58610.6 29.298 413 212 12 495 892 626 973 1.93e-39 159
Msa1445030 AT5G59830.3 49.275 138 69 1 241 378 278 414 3.09e-39 151
Msa1445030 AT5G59830.1 49.275 138 69 1 241 378 278 414 3.09e-39 151
Msa1445030 AT5G59830.2 49.275 138 69 1 241 378 278 414 3.09e-39 151
Msa1445030 AT5G36740.5 28.605 423 237 13 486 890 572 947 4.45e-39 157
Msa1445030 AT5G36740.1 28.605 423 237 13 486 890 572 947 4.45e-39 157
Msa1445030 AT5G36740.4 27.650 434 241 15 486 892 419 806 5.52e-37 150
Msa1445030 AT5G58610.10 29.444 360 201 10 495 839 635 956 3.13e-36 148
Msa1445030 AT5G58610.9 29.444 360 201 10 495 839 626 947 4.03e-36 148
Msa1445030 AT5G13660.1 49.296 142 72 0 229 370 374 515 1.64e-35 142
Msa1445030 AT5G13660.2 48.951 143 72 1 229 370 374 516 5.08e-35 141
Msa1445030 AT5G36670.4 26.879 439 238 18 486 890 572 961 1.14e-30 130
Msa1445030 AT5G36670.5 26.879 439 238 18 486 890 572 961 1.14e-30 130
Msa1445030 AT5G63900.1 27.356 329 170 11 554 873 257 525 1.38e-30 128
Msa1445030 AT5G36670.2 27.596 366 201 13 486 833 572 891 7.84e-30 127
Msa1445030 AT5G36740.2 27.596 366 201 13 486 833 572 891 7.84e-30 127
Msa1445030 AT5G36740.3 27.596 366 201 13 486 833 572 891 7.84e-30 127
Msa1445030 AT5G36670.3 26.000 450 242 19 486 892 419 820 1.23e-28 124
Msa1445030 AT5G36670.1 26.116 448 240 19 486 890 572 971 1.68e-28 124
Msa1445030 AT5G58610.11 29.193 322 175 10 495 801 626 909 3.01e-27 119
Msa1445030 AT3G14980.4 26.444 329 182 11 489 802 651 934 8.81e-25 111

Find 257 sgRNAs with CRISPR-Local

Find 699 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCGATTCATGTCTCTTTA+AGG 0.127417 tig0030904:-16041 Msa1445030:intron
TCTAGGAATATGTGATTATT+TGG 0.150813 tig0030904:+14453 Msa1445030:intergenic
TTGTGCAGGCGAAATATTTC+TGG 0.184888 tig0030904:-7137 Msa1445030:intron
AATCTGCTCTTTACCTTTCC+AGG 0.198769 tig0030904:+14746 Msa1445030:intergenic
CTGATTCCTGTTATGGTATA+TGG 0.204303 tig0030904:-7794 Msa1445030:CDS
TGAGATTTGGAGTTTATATA+TGG 0.220931 tig0030904:+16207 Msa1445030:intergenic
GCAAATGATGATTATAATAG+TGG 0.236158 tig0030904:-14947 Msa1445030:CDS
GTTGAGCTCGATGGGATTAT+TGG 0.243862 tig0030904:-14657 Msa1445030:CDS
TCATGTATAATGCTATAAAT+TGG 0.250757 tig0030904:+14420 Msa1445030:intergenic
AATCACATATTCCTAGAAAA+TGG 0.255410 tig0030904:-14447 Msa1445030:CDS
AATATTGTTGTACATATTTA+CGG 0.256569 tig0030904:-5962 Msa1445030:three_prime_UTR
TAGTATCTGCCGGGCTTCTT+AGG 0.257711 tig0030904:-6981 Msa1445030:CDS
TCACGGGGATGATGAATATT+TGG 0.260379 tig0030904:-14969 Msa1445030:CDS
TCCATTTGGACTAAGAAATT+AGG 0.275286 tig0030904:-6657 Msa1445030:CDS
GAAGATTCGGAGTTGTATTC+TGG 0.287560 tig0030904:-14884 Msa1445030:CDS
GAATTGACTTGCATGGTTCT+TGG 0.294612 tig0030904:-6023 Msa1445030:three_prime_UTR
ATTGGAGAGAGAAGAGTGTT+AGG 0.298052 tig0030904:+16118 Msa1445030:intergenic
AATATTTCTGGCCAAGAATT+CGG 0.299340 tig0030904:-7125 Msa1445030:CDS
CTGCACCTCTTTAAGATGTT+TGG 0.299842 tig0030904:+6417 Msa1445030:intergenic
CATCCACCCACTTCATATTC+TGG 0.300717 tig0030904:+9583 Msa1445030:intergenic
ATATTTCTGGCCAAGAATTC+GGG 0.311304 tig0030904:-7124 Msa1445030:CDS
GAACCTTCTTGCTGCTTTGT+AGG 0.312071 tig0030904:+13177 Msa1445030:intergenic
TACTTCTATGTTCTTGCTCT+TGG 0.323315 tig0030904:-6267 Msa1445030:three_prime_UTR
TATGGGAATGGCAGTGGATA+TGG 0.328598 tig0030904:-15007 Msa1445030:CDS
ACATTATTGGGGAAGGCGTT+TGG 0.335634 tig0030904:+14827 Msa1445030:intergenic
TTGGAGAGAGAAGAGTGTTA+GGG 0.338277 tig0030904:+16119 Msa1445030:intergenic
TATCAACGAGGGATCCTTCC+AGG 0.341212 tig0030904:-14337 Msa1445030:CDS
TTGGTGTTGTAACTAAATTT+TGG 0.344094 tig0030904:-6329 Msa1445030:three_prime_UTR
ATGGGGAACGTGGCCTAAAA+TGG 0.351198 tig0030904:-6152 Msa1445030:three_prime_UTR
ATTTCAATTGCAGCCTGCTT+GGG 0.355527 tig0030904:-9718 Msa1445030:intron
TATTTCAATTGCAGCCTGCT+TGG 0.361264 tig0030904:-9719 Msa1445030:intron
AGAAGTGTAGTGAAGGAGAT+TGG 0.370702 tig0030904:+16100 Msa1445030:intergenic
GCCTAATTTCTTAGTCCAAA+TGG 0.376041 tig0030904:+6656 Msa1445030:intergenic
ACGAGGGATCCTTCCAGGTT+TGG 0.376818 tig0030904:-14332 Msa1445030:CDS
GGAGTTGTATTCTGGCAATA+TGG 0.378266 tig0030904:-14876 Msa1445030:CDS
CGGTATAGCCAGTAGGTGTT+TGG 0.378831 tig0030904:+15059 Msa1445030:intergenic
CAGGGGATGCAGAGTCCATT+TGG 0.382960 tig0030904:-6671 Msa1445030:CDS
TGGGTGGATGCGTTGTTTGC+AGG 0.387332 tig0030904:-9570 Msa1445030:intron
GATCCCATCGTTGCAATATC+TGG 0.389667 tig0030904:-7824 Msa1445030:CDS
CGGTTGAACTAGCATGCTTC+GGG 0.390012 tig0030904:+15137 Msa1445030:intergenic
GAGAGAAGAGTGTTAGGGTT+TGG 0.391498 tig0030904:+16124 Msa1445030:intergenic
GCTTACCCATATACCATAAC+AGG 0.391501 tig0030904:+7788 Msa1445030:intergenic
TGTTCTGTTGCAGAAACATT+TGG 0.398769 tig0030904:+15388 Msa1445030:intergenic
AGAGTGTTAGGGTTTGGTTT+AGG 0.400190 tig0030904:+16130 Msa1445030:intergenic
GATGGCAGTGGCAGTGACTA+TGG 0.400420 tig0030904:-15037 Msa1445030:CDS
GTATCATGTTGGTTGCTTGC+GGG 0.403484 tig0030904:-8996 Msa1445030:CDS
CTCATCTGGCGTGCTGTTTG+TGG 0.404835 tig0030904:+14386 Msa1445030:intergenic
AACTACTCACGGTTGACGTC+TGG 0.405856 tig0030904:+10293 Msa1445030:intergenic
AAGTGTTCGTGGTTGAGATT+TGG 0.406597 tig0030904:+16194 Msa1445030:intergenic
TTATCAACCGGTATCCTTGA+TGG 0.408535 tig0030904:-14794 Msa1445030:CDS
GACTCTGCATCCCCTGCAGC+AGG 0.410293 tig0030904:+6678 Msa1445030:intergenic
AAGCTGGTGCTCCCTGCTGC+AGG 0.415428 tig0030904:-6690 Msa1445030:CDS
TCGTGACCTGATTCCTGTTA+TGG 0.418037 tig0030904:-7801 Msa1445030:CDS
CCTTGTCGGAACTAATAATC+AGG 0.420091 tig0030904:-8762 Msa1445030:CDS
AAAAGTAATCTTTCGAATAC+CGG 0.420888 tig0030904:+15117 Msa1445030:intergenic
TTCTCAGAGGCTCTGTTAGT+TGG 0.424678 tig0030904:-15602 Msa1445030:five_prime_UTR
CTGCAGAACTCAGTTTCTGC+TGG 0.425684 tig0030904:-8805 Msa1445030:CDS
AATTTCAGTGAATTCGTGTT+TGG 0.426088 tig0030904:-15696 Msa1445030:five_prime_UTR
AGTGGATATGGCTATGGATA+TGG 0.426832 tig0030904:-14995 Msa1445030:CDS
TGGTAGAGAGCTCGTATGGC+AGG 0.428854 tig0030904:-14922 Msa1445030:CDS
GTTGGTTGCTTGCGGGACAT+TGG 0.430834 tig0030904:-8989 Msa1445030:CDS
ACATTCTTTATAACCTCATC+TGG 0.434195 tig0030904:+14372 Msa1445030:intergenic
CCGGTTGAACTAGCATGCTT+CGG 0.435129 tig0030904:+15136 Msa1445030:intergenic
AGTTCTATTGTAGTATCTGC+CGG 0.436363 tig0030904:-6991 Msa1445030:CDS
AACAGTAATAATTTGTGATC+AGG 0.437855 tig0030904:-9113 Msa1445030:intron
CCGAAGCATGCTAGTTCAAC+CGG 0.438023 tig0030904:-15136 Msa1445030:CDS
AATTTGTGTCAGAATGATAA+AGG 0.439373 tig0030904:-15202 Msa1445030:CDS
CAATTCCAACCTTGATTCCT+CGG 0.442972 tig0030904:+15519 Msa1445030:intergenic
CGTGTCAACCGTATCATGAT+TGG 0.445167 tig0030904:+9619 Msa1445030:intergenic
TTCTTTGCAATGGATGTCCT+AGG 0.446094 tig0030904:-10073 Msa1445030:CDS
GAGATTTGGAGTTTATATAT+GGG 0.448844 tig0030904:+16208 Msa1445030:intergenic
GTTTCCACTCATCAGCTGTC+TGG 0.451039 tig0030904:+11053 Msa1445030:intergenic
TACCATACCATCTTCCTTGT+CGG 0.451679 tig0030904:-8776 Msa1445030:CDS
TTGGTTGCTTGCGGGACATT+GGG 0.451865 tig0030904:-8988 Msa1445030:CDS
TTCTCTAAATGTAGAAAAGC+TGG 0.453959 tig0030904:-6706 Msa1445030:CDS
AAATACAGCACAAAGTATAC+TGG 0.455013 tig0030904:-13143 Msa1445030:CDS
AATTGTCACCTTTCCAAACC+TGG 0.456107 tig0030904:+14319 Msa1445030:intergenic
CATATACCATAACAGGAATC+AGG 0.457604 tig0030904:+7795 Msa1445030:intergenic
AGCAGTTTGTGTGCAAGAAT+TGG 0.459554 tig0030904:-15563 Msa1445030:CDS
GTTTACCTGTTGTATGTATG+AGG 0.461715 tig0030904:+13116 Msa1445030:intergenic
GGAACTGACATCTACTGGTT+TGG 0.462522 tig0030904:-15296 Msa1445030:CDS
ACTCACGGTATCATGAGAAC+TGG 0.465826 tig0030904:+15267 Msa1445030:intergenic
ATATGTTCCTTATGAAGATT+CGG 0.467208 tig0030904:-14897 Msa1445030:CDS
TCACAAGATGAGTGAAGATC+AGG 0.472645 tig0030904:-6631 Msa1445030:intron
GAGAGAAAAGTGAGAGAGTG+CGG 0.472812 tig0030904:+16166 Msa1445030:intergenic
TAAGCCAACTCGGCACCATC+TGG 0.474427 tig0030904:+10620 Msa1445030:intergenic
ATCAAATGATGAATTGCGTT+CGG 0.474499 tig0030904:-15422 Msa1445030:CDS
ACAACAAAACCACTTATCCT+TGG 0.476811 tig0030904:+8855 Msa1445030:intergenic
TGATTCCTGTTATGGTATAT+GGG 0.477661 tig0030904:-7793 Msa1445030:intron
GCTCTCTACTTGTAGCTACC+AGG 0.479856 tig0030904:+6929 Msa1445030:intergenic
GATGATTACCAAACACCTAC+TGG 0.479989 tig0030904:-15067 Msa1445030:CDS
GGAGGTTACAAACAAGGAAA+TGG 0.483140 tig0030904:-10476 Msa1445030:CDS
CAACAAAACCACTTATCCTT+GGG 0.483162 tig0030904:+8856 Msa1445030:intergenic
GGCTATGGATATGGTTATCA+CGG 0.483376 tig0030904:-14986 Msa1445030:CDS
CGTCACTATCTCCCGTAGTA+AGG 0.483399 tig0030904:+10132 Msa1445030:intergenic
AACAGTGAGAAGTGTAGTGA+AGG 0.484683 tig0030904:+16093 Msa1445030:intergenic
ATAGCTCTCTCTTTAGCAAA+TGG 0.484963 tig0030904:-10161 Msa1445030:CDS
TGTGTGCAAGAATTGGTTGA+TGG 0.485091 tig0030904:-15556 Msa1445030:CDS
AACATCAGTGCTGGAAAAGA+TGG 0.491255 tig0030904:-6377 Msa1445030:CDS
CGGAAAATACCGAGGAATCA+AGG 0.492209 tig0030904:-15528 Msa1445030:CDS
GCACCATCTGGTAGGCCATT+AGG 0.495313 tig0030904:+10632 Msa1445030:intergenic
CTTCAACAAAACATCAGTGC+TGG 0.496640 tig0030904:-6386 Msa1445030:CDS
GATCACAAATTATTACTGTT+CGG 0.496937 tig0030904:+9116 Msa1445030:intergenic
GTCTGGCCGCCATTCCAGCA+TGG 0.498328 tig0030904:+10310 Msa1445030:intergenic
ATTAGTTCCGACAAGGAAGA+TGG 0.499097 tig0030904:+8769 Msa1445030:intergenic
CGCCACATATATGCTTCCAA+TGG 0.499581 tig0030904:-10200 Msa1445030:CDS
TCGCAGTTTGAAGCCCATGC+TGG 0.501139 tig0030904:-10324 Msa1445030:CDS
ATGGCTAACATTCTCAGATT+CGG 0.501313 tig0030904:+15330 Msa1445030:intergenic
TGCCACTTAAAATTCTCCAT+TGG 0.501723 tig0030904:+8692 Msa1445030:intergenic
ATTATTAGGTTGAGCTCGAT+GGG 0.503113 tig0030904:-14665 Msa1445030:intron
AGACAATGCCAACCACTCTC+TGG 0.504882 tig0030904:+9682 Msa1445030:intergenic
TCTTTGCAATGGATGTCCTA+GGG 0.507931 tig0030904:-10072 Msa1445030:CDS
GCATGCCTCATACATACAAC+AGG 0.508258 tig0030904:-13121 Msa1445030:intron
AGTGACTATGGATATAGCTA+TGG 0.509498 tig0030904:-15025 Msa1445030:CDS
AGAGAAAAGTGAGAGAGTGC+GGG 0.510964 tig0030904:+16167 Msa1445030:intergenic
AGGAGCTTCCCAAGGATAAG+TGG 0.511538 tig0030904:-8864 Msa1445030:CDS
CATTCTCAGATTCGGTCGGT+TGG 0.512953 tig0030904:+15338 Msa1445030:intergenic
CTGTGGTTGTTGTGATATAG+AGG 0.515703 tig0030904:-10447 Msa1445030:intron
GCATGGGCTTCAAACTGCGA+AGG 0.518290 tig0030904:+10327 Msa1445030:intergenic
GTTTGAAGCCCATGCTGGAA+TGG 0.519222 tig0030904:-10319 Msa1445030:CDS
TACAACTCCGAATCTTCATA+AGG 0.519644 tig0030904:+14890 Msa1445030:intergenic
CTGATGGTTGCACTAAGAAA+AGG 0.521651 tig0030904:-10821 Msa1445030:intron
AGCATGCTGCTCAAACTCAT+AGG 0.521651 tig0030904:+14494 Msa1445030:intergenic
AATTATTAGGTTGAGCTCGA+TGG 0.522687 tig0030904:-14666 Msa1445030:intron
AGTATCATGTTGGTTGCTTG+CGG 0.523548 tig0030904:-8997 Msa1445030:CDS
GGAGATTTGATTCTTTGCAA+TGG 0.524987 tig0030904:-10083 Msa1445030:CDS
TCTGGCCGCCATTCCAGCAT+GGG 0.525191 tig0030904:+10311 Msa1445030:intergenic
GTGAAATATATTTATAACCC+TGG 0.528498 tig0030904:-14764 Msa1445030:CDS
ATCATGAAGTGTCAATCCAT+TGG 0.529107 tig0030904:+10184 Msa1445030:intergenic
TATAGCTATGGGAATGGCAG+TGG 0.529302 tig0030904:-15013 Msa1445030:CDS
ATCTGCTCTTTACCTTTCCA+GGG 0.529845 tig0030904:+14747 Msa1445030:intergenic
CAATATTGCTGAGCTTCCCC+TGG 0.530864 tig0030904:-6947 Msa1445030:CDS
TAATCAGGAAGCATGAGGAC+AGG 0.533029 tig0030904:-8747 Msa1445030:CDS
ATGTTAGCCATGCAGAGTGT+GGG 0.533335 tig0030904:-15318 Msa1445030:CDS
TCGCACACGCGAAGATGAGA+AGG 0.534198 tig0030904:+11105 Msa1445030:intergenic
GCTATGGATATGGTTATCAC+GGG 0.534961 tig0030904:-14985 Msa1445030:CDS
CGCTGTTCTCTTGCATAGAG+AGG 0.535338 tig0030904:-6737 Msa1445030:CDS
AATCAGGAAGCATGAGGACA+GGG 0.536694 tig0030904:-8746 Msa1445030:CDS
TTCCGACAAGGAAGATGGTA+TGG 0.538378 tig0030904:+8774 Msa1445030:intergenic
AATGGCAGTGGATATGGCTA+TGG 0.538700 tig0030904:-15001 Msa1445030:CDS
TATGAGTTTGAGCAGCATGC+TGG 0.538811 tig0030904:-14492 Msa1445030:CDS
TGCAGTGTCCCGTGTTGTGA+TGG 0.540141 tig0030904:-15164 Msa1445030:CDS
AGCTGGTGCTCCCTGCTGCA+GGG 0.540416 tig0030904:-6689 Msa1445030:CDS
TGTGGGGAACTGACATCTAC+TGG 0.541241 tig0030904:-15301 Msa1445030:CDS
GACAGGGGATTATGTACGTA+TGG 0.542273 tig0030904:-8730 Msa1445030:CDS
TGCAGCTCCATCAAGGATAC+CGG 0.549874 tig0030904:+14787 Msa1445030:intergenic
GTTAACCAAACATCTTAAAG+AGG 0.550069 tig0030904:-6422 Msa1445030:CDS
GCCTAAAATGGTAGAAGTAG+AGG 0.551481 tig0030904:-6140 Msa1445030:three_prime_UTR
CCTAGCACCTCTTTCATCAC+CGG 0.553179 tig0030904:+9642 Msa1445030:intergenic
GTTCTATTGTAGTATCTGCC+GGG 0.553325 tig0030904:-6990 Msa1445030:CDS
GCTGGTGCTCCCTGCTGCAG+GGG 0.553471 tig0030904:-6688 Msa1445030:CDS
TCAGGGACAACGATTTGCAC+AGG 0.553644 tig0030904:-10667 Msa1445030:intron
CCTACCAGATGGTGCCGAGT+TGG 0.554670 tig0030904:-10624 Msa1445030:CDS
ATAGTCACTGCCACTGCCAT+CGG 0.556162 tig0030904:+15039 Msa1445030:intergenic
ATGCCTAATGGCCTACCAGA+TGG 0.557585 tig0030904:-10635 Msa1445030:CDS
GGGTTTGGTTTAGGAACGAA+AGG 0.558482 tig0030904:+16139 Msa1445030:intergenic
AAATGGTCAAAACCTTACTA+CGG 0.559162 tig0030904:-10144 Msa1445030:CDS
CAGCATGCACGAATAAATCA+AGG 0.560419 tig0030904:+15673 Msa1445030:intergenic
GACGATATGTGTGCAGTATG+TGG 0.562409 tig0030904:-10113 Msa1445030:CDS
GGACATTGGGCTATGTGAGT+TGG 0.565407 tig0030904:-8975 Msa1445030:CDS
AAATACCGAGGAATCAAGGT+TGG 0.565993 tig0030904:-15524 Msa1445030:CDS
GGCTTACTATGTCAAAGGAC+AGG 0.566342 tig0030904:-10603 Msa1445030:intron
TACACTGTGTAAACCCAAGC+AGG 0.566345 tig0030904:+9705 Msa1445030:intergenic
CTAAATTGTGAAGATAATAC+CGG 0.566713 tig0030904:-9661 Msa1445030:CDS
GGATCCTTCCAGGTTTGGAA+AGG 0.568977 tig0030904:-14327 Msa1445030:intron
CAATCATGATACGGTTGACA+CGG 0.569872 tig0030904:-9618 Msa1445030:CDS
GAGACATGAATGATATCCAA+TGG 0.570210 tig0030904:-8708 Msa1445030:CDS
GAGGTTATAAAGAATGTGGC+TGG 0.571005 tig0030904:-14366 Msa1445030:CDS
TCATGTTGAATTGACTTGCA+TGG 0.572827 tig0030904:-6030 Msa1445030:three_prime_UTR
GAGTAGTAAGTGTAGGTGCT+TGG 0.573254 tig0030904:+10867 Msa1445030:intergenic
TTGGCTGCTAATATCATGAA+AGG 0.573840 tig0030904:+15357 Msa1445030:intergenic
AGTGCTGGAAAAGATGGTGC+AGG 0.576023 tig0030904:-6371 Msa1445030:CDS
CTCTCTACTTGTAGCTACCA+GGG 0.577610 tig0030904:+6930 Msa1445030:intergenic
ATTTCACTGCAGCTCCATCA+AGG 0.579262 tig0030904:+14780 Msa1445030:intergenic
GTGCGGGAATGAAGTGTTCG+TGG 0.579769 tig0030904:+16183 Msa1445030:intergenic
GTGACTATGGATATAGCTAT+GGG 0.582699 tig0030904:-15024 Msa1445030:CDS
AATGGTCAAAACCTTACTAC+GGG 0.583818 tig0030904:-10143 Msa1445030:CDS
CTCGATGGGATTATTGGTGA+TGG 0.584397 tig0030904:-14651 Msa1445030:CDS
GGTAGAGAGCTCGTATGGCA+GGG 0.584644 tig0030904:-14921 Msa1445030:CDS
CCTGATTATTAGTTCCGACA+AGG 0.584730 tig0030904:+8762 Msa1445030:intergenic
GATAATACCGGTGATGAAAG+AGG 0.586090 tig0030904:-9649 Msa1445030:CDS
CGGGATTTCCATCACAACAC+GGG 0.586430 tig0030904:+15156 Msa1445030:intergenic
GTCACCTTTCCAAACCTGGA+AGG 0.586888 tig0030904:+14323 Msa1445030:intergenic
ACAGTGTACCAGAGAGTGGT+TGG 0.587119 tig0030904:-9690 Msa1445030:CDS
TATGGATATAGCTATGGGAA+TGG 0.587377 tig0030904:-15019 Msa1445030:CDS
TCAGTTCCCCACACTCTGCA+TGG 0.587821 tig0030904:+15311 Msa1445030:intergenic
CGACCAGATATTGCAACGAT+GGG 0.591304 tig0030904:+7821 Msa1445030:intergenic
TCTCCTACAAAGCAGCAAGA+AGG 0.591457 tig0030904:-13180 Msa1445030:CDS
GTGCTAGGCCAATCATGATA+CGG 0.593336 tig0030904:-9627 Msa1445030:CDS
GGGTTGGTAGAGAGCTCGTA+TGG 0.593441 tig0030904:-14926 Msa1445030:CDS
TGAGTGATGAAGCTGGTGTT+CGG 0.593660 tig0030904:-15249 Msa1445030:CDS
CGACTGCAATCGAATATATG+TGG 0.593667 tig0030904:-8830 Msa1445030:CDS
CATGGGCTTCAAACTGCGAA+GGG 0.593763 tig0030904:+10328 Msa1445030:intergenic
ATGTGTGCAGTATGTGGAGA+TGG 0.595554 tig0030904:-10107 Msa1445030:CDS
CAAGGAAATGGTATAGTCTG+TGG 0.597162 tig0030904:-10464 Msa1445030:CDS
AGAATTGGTTGATGGAAAGA+CGG 0.598733 tig0030904:-15548 Msa1445030:CDS
AGCACCTACACTTACTACTC+AGG 0.600275 tig0030904:-10864 Msa1445030:CDS
ATCCATTGGAAGCATATATG+TGG 0.600631 tig0030904:+10198 Msa1445030:intergenic
GTGGCAGCCTTGTATAATGT+AGG 0.606958 tig0030904:-6196 Msa1445030:three_prime_UTR
TTTCAGTATCAGCAACACAT+TGG 0.609213 tig0030904:+15482 Msa1445030:intergenic
TAGAAGTAATGTTACAGTGA+GGG 0.611585 tig0030904:+6282 Msa1445030:intergenic
AACACCAGCTTCATCACTCA+CGG 0.612359 tig0030904:+15252 Msa1445030:intergenic
ATATATTTATAACCCTGGAA+AGG 0.612693 tig0030904:-14759 Msa1445030:intron
TTTACTACAGGAGCTTCCCA+AGG 0.613778 tig0030904:-8872 Msa1445030:intron
TGAAGCCCATGCTGGAATGG+CGG 0.615089 tig0030904:-10316 Msa1445030:CDS
GAACCAGAATATGAAGTGGG+TGG 0.615638 tig0030904:-9586 Msa1445030:CDS
ACGACCAGATATTGCAACGA+TGG 0.617395 tig0030904:+7820 Msa1445030:intergenic
TAAAGAACCAGAATATGAAG+TGG 0.620957 tig0030904:-9590 Msa1445030:CDS
TGATGATTATAATAGTGGGT+TGG 0.621646 tig0030904:-14942 Msa1445030:CDS
CCGCAGAAGAGAAGTGCTGA+TGG 0.622167 tig0030904:-10837 Msa1445030:CDS
GTAGAGAGCTCGTATGGCAG+GGG 0.622368 tig0030904:-14920 Msa1445030:CDS
CTAACATTCTCAGATTCGGT+CGG 0.622546 tig0030904:+15334 Msa1445030:intergenic
GAGTTGGCTTACTATGTCAA+AGG 0.622870 tig0030904:-10608 Msa1445030:CDS
TATTTCTGGCCAAGAATTCG+GGG 0.624320 tig0030904:-7123 Msa1445030:CDS
CACAAACAGCACGCCAGATG+AGG 0.626750 tig0030904:-14385 Msa1445030:CDS
TTACTTGGAGGTTACAAACA+AGG 0.627097 tig0030904:-10482 Msa1445030:CDS
AATCATGATACGGTTGACAC+GGG 0.627097 tig0030904:-9617 Msa1445030:CDS
TCACCTGCATGAAAAGCCCT+AGG 0.627515 tig0030904:+10056 Msa1445030:intergenic
CTGCCATCGGTATAGCCAGT+AGG 0.629361 tig0030904:+15052 Msa1445030:intergenic
TGTTAGCCATGCAGAGTGTG+GGG 0.629545 tig0030904:-15317 Msa1445030:CDS
CCAACTCGGCACCATCTGGT+AGG 0.631639 tig0030904:+10624 Msa1445030:intergenic
ACTCTGCATCCCCTGCAGCA+GGG 0.632470 tig0030904:+6679 Msa1445030:intergenic
CAAATGATGATTATAATAGT+GGG 0.633509 tig0030904:-14946 Msa1445030:CDS
GCAGCAGCTCGTGAAAGTAA+CGG 0.635905 tig0030904:+8646 Msa1445030:intergenic
ACTAATAATCAGGAAGCATG+AGG 0.636804 tig0030904:-8752 Msa1445030:CDS
AAAGAACCAGAATATGAAGT+GGG 0.639564 tig0030904:-9589 Msa1445030:CDS
AATGTTAGCCATGCAGAGTG+TGG 0.640010 tig0030904:-15319 Msa1445030:CDS
TCGGGATTTCCATCACAACA+CGG 0.640467 tig0030904:+15155 Msa1445030:intergenic
ACACCTACTGGCTATACCGA+TGG 0.641142 tig0030904:-15055 Msa1445030:CDS
TGTGCAGTATGTGGAGATGG+AGG 0.641733 tig0030904:-10104 Msa1445030:CDS
GCTACAAGTAGAGAGCATCA+AGG 0.644661 tig0030904:-6922 Msa1445030:CDS
AGATGAGGTTATAAAGAATG+TGG 0.645405 tig0030904:-14370 Msa1445030:CDS
TATACCTGAGTAGTAAGTGT+AGG 0.646579 tig0030904:+10860 Msa1445030:intergenic
GGGGAAGCTCAGCAATATTG+CGG 0.647399 tig0030904:+6950 Msa1445030:intergenic
ACTGGCTATACCGATGGCAG+TGG 0.650962 tig0030904:-15049 Msa1445030:CDS
GATGGGATTATTGGTGATGG+TGG 0.652514 tig0030904:-14648 Msa1445030:CDS
TGAACCAGACAGCTGATGAG+TGG 0.653688 tig0030904:-11057 Msa1445030:CDS
TTACACAGTGTACCAGAGAG+TGG 0.659593 tig0030904:-9694 Msa1445030:CDS
CCATCAGCACTTCTCTTCTG+CGG 0.662514 tig0030904:+10837 Msa1445030:intergenic
AATACAGTAAAATTCTATAG+CGG 0.663217 tig0030904:+6073 Msa1445030:intergenic
TTTGACATAGTAAGCCAACT+CGG 0.664130 tig0030904:+10610 Msa1445030:intergenic
CCGGTGATGAAAGAGGTGCT+AGG 0.664182 tig0030904:-9642 Msa1445030:CDS
CATTGGAAGCATATATGTGG+CGG 0.666351 tig0030904:+10201 Msa1445030:intergenic
AAGAATTGAAGAGAGCGAAG+AGG 0.668339 tig0030904:+16233 Msa1445030:intergenic
ATTTCTGGCCAAGAATTCGG+GGG 0.674461 tig0030904:-7122 Msa1445030:CDS
ATCAGGAAGCATGAGGACAG+GGG 0.674473 tig0030904:-8745 Msa1445030:CDS
ATTTGAATTTGAATTCTCAG+AGG 0.674943 tig0030904:-15615 Msa1445030:five_prime_UTR
ATAGAAGTAATGTTACAGTG+AGG 0.687941 tig0030904:+6281 Msa1445030:intergenic
GCTGGTTCATCTATCAACGA+GGG 0.690296 tig0030904:-14348 Msa1445030:CDS
TCTCTACTTGTAGCTACCAG+GGG 0.693635 tig0030904:+6931 Msa1445030:intergenic
GATACCGTGAGTGATGAAGC+TGG 0.694052 tig0030904:-15256 Msa1445030:CDS
TGTGAGAAGGAGTATCATGT+TGG 0.706727 tig0030904:-9007 Msa1445030:CDS
TGGAAAGACGGAAAATACCG+AGG 0.709142 tig0030904:-15536 Msa1445030:CDS
CTATGGATATGGTTATCACG+GGG 0.709587 tig0030904:-14984 Msa1445030:CDS
GGCTGGTTCATCTATCAACG+AGG 0.715047 tig0030904:-14349 Msa1445030:CDS
GGTGATGGTGGATATCTGTG+TGG 0.715376 tig0030904:-14636 Msa1445030:CDS
ATTTATTCGTGCATGCTGTG+CGG 0.742034 tig0030904:-15668 Msa1445030:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGAATTTAAATTAATTC+TGG - tig0030904:6286-6305 Msa1445030:three_prime_UTR 10.0%
!!! TCTTATATTTTTCAATTATT+AGG - tig0030904:7546-7565 Msa1445030:intron 10.0%
!! ATTATTATTATTATTATTGC+AGG + tig0030904:8292-8311 Msa1445030:intergenic 10.0%
!!! CATTAAAAGATATTATTTTT+AGG + tig0030904:9145-9164 Msa1445030:intergenic 10.0%
!!! CTAAAAATAATATCTTTTAA+TGG - tig0030904:9143-9162 Msa1445030:CDS 10.0%
!!! CATTTTTTAGAAATTTAATT+AGG - tig0030904:9641-9660 Msa1445030:CDS 10.0%
!!! TTTAAAGAATTTAAAATTCT+AGG - tig0030904:10343-10362 Msa1445030:intron 10.0%
!!! ATTTGTTTTTATATTAAACT+TGG - tig0030904:10576-10595 Msa1445030:intron 10.0%
!!! TTTGTTTTTATATTAAACTT+GGG - tig0030904:10577-10596 Msa1445030:intron 10.0%
!!! ATTATTTTCCTTATTTAATT+AGG - tig0030904:10623-10642 Msa1445030:CDS 10.0%
!! GATATCATATTATAATATTA+TGG - tig0030904:12476-12495 Msa1445030:intron 10.0%
!!! TTATACCAATATATTTTTTT+GGG - tig0030904:12947-12966 Msa1445030:intron 10.0%
!!! TATTGAATTGTTAATTTTTT+TGG - tig0030904:13041-13060 Msa1445030:intron 10.0%
!! AAGATAACAATAATATATAA+AGG + tig0030904:15661-15680 Msa1445030:intergenic 10.0%
!! TTGAAAATGATTGAATTAAA+CGG - tig0030904:6325-6344 Msa1445030:three_prime_UTR 15.0%
!! ATAAAAACCATAATTAGAAA+CGG + tig0030904:6477-6496 Msa1445030:intergenic 15.0%
!!! AATAGTTTTTTCACATTATT+GGG + tig0030904:7413-7432 Msa1445030:intergenic 15.0%
!!! TAATAGTTTTTTCACATTAT+TGG + tig0030904:7414-7433 Msa1445030:intergenic 15.0%
!! ATAAAAAAAAAAAACAGACT+GGG + tig0030904:7507-7526 Msa1445030:intergenic 15.0%
!! TATAAAAAAAAAAAACAGAC+TGG + tig0030904:7508-7527 Msa1445030:intergenic 15.0%
!! GATTTATTTATCGATATTAT+TGG - tig0030904:7648-7667 Msa1445030:intron 15.0%
!! TAATAATAATAAATCCATAG+TGG - tig0030904:8302-8321 Msa1445030:intron 15.0%
!! AATAATAATAAATCCATAGT+GGG - tig0030904:8303-8322 Msa1445030:intron 15.0%
!!! ATATGTTTATATTTTTTCCA+TGG - tig0030904:9009-9028 Msa1445030:CDS 15.0%
!!! ATTATTTTTAGGTTTATTTC+TGG + tig0030904:9134-9153 Msa1445030:intergenic 15.0%
!!! ATAAAAGTATTACTGAAAAA+AGG - tig0030904:9370-9389 Msa1445030:intron 15.0%
!! ATCATTGATATGATTTATAA+CGG + tig0030904:9523-9542 Msa1445030:intergenic 15.0%
!! TTACTTATAAACTTATATTC+AGG + tig0030904:10222-10241 Msa1445030:intergenic 15.0%
!! TGAATATAAGTTTATAAGTA+AGG - tig0030904:10221-10240 Msa1445030:intron 15.0%
!! GAATATAAGTTTATAAGTAA+GGG - tig0030904:10222-10241 Msa1445030:intron 15.0%
!!! TCTAGGATTAATATAAATAA+GGG - tig0030904:10654-10673 Msa1445030:CDS 15.0%
!!! CAATTTTTAAAAAACATAGA+AGG + tig0030904:12203-12222 Msa1445030:intergenic 15.0%
!!! TTTACTTTCATTTAAGATTA+TGG - tig0030904:12758-12777 Msa1445030:intron 15.0%
!!! CTTATACCAATATATTTTTT+TGG - tig0030904:12946-12965 Msa1445030:intron 15.0%
!!! AAGTCACTTTATATTAAATA+GGG + tig0030904:13834-13853 Msa1445030:intergenic 15.0%
!!! AAAGTCACTTTATATTAAAT+AGG + tig0030904:13835-13854 Msa1445030:intergenic 15.0%
!!! ACTACAATTTATTTTAATGT+TGG - tig0030904:14461-14480 Msa1445030:CDS 15.0%
!!! ACAATTTTTGTTTTTTGTTT+TGG - tig0030904:15777-15796 Msa1445030:intron 15.0%
!! AATATTGTTGTACATATTTA+CGG - tig0030904:16263-16282 Msa1445030:five_prime_UTR 15.0%
!! TTCGATTCAAAAGTTTATAT+CGG - tig0030904:6361-6380 Msa1445030:CDS 20.0%
!! TTAAAAACCGTTTCTAATTA+TGG - tig0030904:6467-6486 Msa1445030:intron 20.0%
!!! TAATTATGGTTTTTATCTTC+AGG - tig0030904:6481-6500 Msa1445030:intron 20.0%
!!! TTGATTTTCTGTTAGTTATT+AGG - tig0030904:6585-6604 Msa1445030:intron 20.0%
!!! TCTTTAGCTTGTTTTTTATT+AGG + tig0030904:6780-6799 Msa1445030:intergenic 20.0%
!!! TTTTAAGTTCAGTAAAAAGA+AGG - tig0030904:7127-7146 Msa1445030:CDS 20.0%
!! CAAATGATGATTATAATAGT+GGG - tig0030904:7279-7298 Msa1445030:intron 20.0%
!!! ATAGTTTTTTCACATTATTG+GGG + tig0030904:7412-7431 Msa1445030:intergenic 20.0%
!! TCATGTATAATGCTATAAAT+TGG + tig0030904:7808-7827 Msa1445030:intergenic 20.0%
!!! ATTATTTCTCTGGTTTTTTT+TGG - tig0030904:7926-7945 Msa1445030:intron 20.0%
!!! TAGTGCTTCAATTTTTTTTT+TGG - tig0030904:7949-7968 Msa1445030:intron 20.0%
!! ATGTTACATAATACAATAAC+TGG + tig0030904:8197-8216 Msa1445030:intergenic 20.0%
!! AAACAACAATTAATAAGAGA+CGG + tig0030904:9242-9261 Msa1445030:intergenic 20.0%
!!! CTCTTATTAATTGTTGTTTA+AGG - tig0030904:9243-9262 Msa1445030:intron 20.0%
!! ACTAACTACTTTAGTAATAA+CGG + tig0030904:9318-9337 Msa1445030:intergenic 20.0%
!! TCATTGATATGATTTATAAC+GGG + tig0030904:9522-9541 Msa1445030:intergenic 20.0%
!! TTTAAACCACAAGAAAATTA+AGG + tig0030904:9670-9689 Msa1445030:intergenic 20.0%
!! AAAACTAAAACAGATGATAT+TGG + tig0030904:9770-9789 Msa1445030:intergenic 20.0%
!! CTCTTAATTCTTAGAAATTA+AGG + tig0030904:10296-10315 Msa1445030:intergenic 20.0%
!!! TTCCTTATTTAATTAGGATT+AGG - tig0030904:10629-10648 Msa1445030:CDS 20.0%
!!! GTCTAGGATTAATATAAATA+AGG - tig0030904:10653-10672 Msa1445030:CDS 20.0%
!! TGTAAATTACCTAATTCATT+TGG - tig0030904:10752-10771 Msa1445030:intron 20.0%
!! TCAAAATAAAATAGGTTAAG+AGG + tig0030904:11069-11088 Msa1445030:intergenic 20.0%
!! TATATTGTGAATATACAAGA+AGG + tig0030904:11324-11343 Msa1445030:intergenic 20.0%
!!! TTCTCTTAATATTGTGTTTT+TGG - tig0030904:11657-11676 Msa1445030:intron 20.0%
!!! TTCATTTAAGATTATGGTAA+TGG - tig0030904:12764-12783 Msa1445030:intron 20.0%
!!! GATATCATTTTGAAATTCAA+CGG + tig0030904:12856-12875 Msa1445030:intergenic 20.0%
!!! AGTTAAGTACAATTTTCATA+GGG + tig0030904:13149-13168 Msa1445030:intergenic 20.0%
!!! TAGTTAAGTACAATTTTCAT+AGG + tig0030904:13150-13169 Msa1445030:intergenic 20.0%
!! TAATATTTGTGTCAAAAATC+TGG - tig0030904:13677-13696 Msa1445030:intron 20.0%
!! GAAAAATAAATCTCAAAAGT+GGG + tig0030904:13751-13770 Msa1445030:intergenic 20.0%
!! TGTAAAGAATCTTATATCAA+GGG + tig0030904:13773-13792 Msa1445030:intergenic 20.0%
!! TTGTAAAGAATCTTATATCA+AGG + tig0030904:13774-13793 Msa1445030:intergenic 20.0%
!!! AGTCACTTTATATTAAATAG+GGG + tig0030904:13833-13852 Msa1445030:intergenic 20.0%
!!! ATATTTTTTATTACGAGTCT+TGG - tig0030904:14816-14835 Msa1445030:CDS 20.0%
!! ATCACAAGATTAAATGTTTA+AGG - tig0030904:14989-15008 Msa1445030:CDS 20.0%
!! AATTACTCATATTGAAAAAG+TGG - tig0030904:15353-15372 Msa1445030:CDS 20.0%
!! TTGGTAAAATATATCATCTT+TGG + tig0030904:15419-15438 Msa1445030:intergenic 20.0%
!!! TCCTTTTCCTATATTTTTTT+TGG - tig0030904:15993-16012 Msa1445030:intron 20.0%
!! TCCAAAAAAAATATAGGAAA+AGG + tig0030904:15997-16016 Msa1445030:intergenic 20.0%
!!! CTATATTTTTTTTGGAGTAT+GGG - tig0030904:16001-16020 Msa1445030:intron 20.0%
!!! AAAAGAGTAAGTTTTGAAAA+TGG - tig0030904:16054-16073 Msa1445030:five_prime_UTR 20.0%
!!! AAAGAGTAAGTTTTGAAAAT+GGG - tig0030904:16055-16074 Msa1445030:five_prime_UTR 20.0%
!! GCATGCTAATAAAAAAAAAT+TGG + tig0030904:16128-16147 Msa1445030:intergenic 20.0%
!! AATACAGTAAAATTCTATAG+CGG + tig0030904:16155-16174 Msa1445030:intergenic 20.0%
!! GAGATTTGGAGTTTATATAT+GGG + tig0030904:6020-6039 None:intergenic 25.0%
!! TGAGATTTGGAGTTTATATA+TGG + tig0030904:6021-6040 None:intergenic 25.0%
!!! CAATCATTTTCAAGAATATC+AGG + tig0030904:6318-6337 Msa1445030:intergenic 25.0%
! GATTGAATTAAACGGTTATT+CGG - tig0030904:6333-6352 Msa1445030:three_prime_UTR 25.0%
! TTCAAAAGTTTATATCGGAT+TGG - tig0030904:6366-6385 Msa1445030:CDS 25.0%
! ATTTGAATTTGAATTCTCAG+AGG - tig0030904:6610-6629 Msa1445030:intron 25.0%
!!! TTAGCTTGTTTTTTATTAGG+CGG + tig0030904:6777-6796 Msa1445030:intergenic 25.0%
! AATTTGTGTCAGAATGATAA+AGG - tig0030904:7023-7042 Msa1445030:intron 25.0%
! AAAAGTAATCTTTCGAATAC+CGG + tig0030904:7111-7130 Msa1445030:intergenic 25.0%
! GCAAATGATGATTATAATAG+TGG - tig0030904:7278-7297 Msa1445030:intron 25.0%
! ATATGTTCCTTATGAAGATT+CGG - tig0030904:7328-7347 Msa1445030:intron 25.0%
! GTGAAAAAACTATTATCAAC+CGG - tig0030904:7419-7438 Msa1445030:intron 25.0%
! GTGAAATATATTTATAACCC+TGG - tig0030904:7461-7480 Msa1445030:intron 25.0%
! ATATATTTATAACCCTGGAA+AGG - tig0030904:7466-7485 Msa1445030:intron 25.0%
! TCTAGGAATATGTGATTATT+TGG + tig0030904:7775-7794 Msa1445030:intergenic 25.0%
! AATCACATATTCCTAGAAAA+TGG - tig0030904:7778-7797 Msa1445030:intron 25.0%
!!! AAATTGGTTTTCCATTTTCT+AGG + tig0030904:7792-7811 Msa1445030:intergenic 25.0%
!! GAAAATGTGCTAATTTTTGT+GGG - tig0030904:8064-8083 Msa1445030:intron 25.0%
!! TTATTCCATAAAAGTGTACT+AGG + tig0030904:8239-8258 Msa1445030:intergenic 25.0%
! CAACAAGATAAAGATTACTT+GGG + tig0030904:8442-8461 Msa1445030:intergenic 25.0%
! TCAACAAGATAAAGATTACT+TGG + tig0030904:8443-8462 Msa1445030:intergenic 25.0%
! AGAATGCTTGTTTAAACTTT+CGG + tig0030904:8623-8642 Msa1445030:intergenic 25.0%
! TGGTATACATATTAGTCATA+TGG - tig0030904:8917-8936 Msa1445030:intron 25.0%
! ACTACATATCAAATAGTAAG+AGG - tig0030904:8946-8965 Msa1445030:intron 25.0%
! AACATATATAAGACAAATCC+AGG + tig0030904:8996-9015 Msa1445030:intergenic 25.0%
! AAACTGAACATGCAATAATT+GGG + tig0030904:9199-9218 Msa1445030:intergenic 25.0%
! TGAAAACAAGATCGAAATTT+AGG + tig0030904:9623-9642 Msa1445030:intergenic 25.0%
!!! AGCTTCCATATTTTGTTATT+TGG - tig0030904:9689-9708 Msa1445030:CDS 25.0%
!!! TTCCATATTTTGTTATTTGG+CGG - tig0030904:9692-9711 Msa1445030:CDS 25.0%
! ATGATACCATCTTAGAATTT+GGG + tig0030904:10087-10106 Msa1445030:intergenic 25.0%
! TATGATACCATCTTAGAATT+TGG + tig0030904:10088-10107 Msa1445030:intergenic 25.0%
! AGGTAAAATATCATCCAATA+TGG + tig0030904:10202-10221 Msa1445030:intergenic 25.0%
! AATTCTTAGAAATTAAGGCT+TGG + tig0030904:10291-10310 Msa1445030:intergenic 25.0%
! CTCCTAATCCTAATTAAATA+AGG + tig0030904:10634-10653 Msa1445030:intergenic 25.0%
! AATTTACACACTGAAGTTAT+AGG + tig0030904:10740-10759 Msa1445030:intergenic 25.0%
! TACCTAATTCATTTGGATAT+AGG - tig0030904:10759-10778 Msa1445030:intron 25.0%
! CTGGAACATCAAAATAAAAT+AGG + tig0030904:11077-11096 Msa1445030:intergenic 25.0%
!!! TTGATTTTTGAGCATGTTTT+TGG - tig0030904:11248-11267 Msa1445030:intron 25.0%
!!! TGATTTTTGAGCATGTTTTT+GGG - tig0030904:11249-11268 Msa1445030:intron 25.0%
!!! AATTGCATTTTGCTTTTTCA+GGG - tig0030904:11541-11560 Msa1445030:intron 25.0%
! CACATGTATAAATATGTAGT+CGG + tig0030904:11826-11845 Msa1445030:intergenic 25.0%
!! CTTTATAACATTTTGTTCGT+GGG - tig0030904:11862-11881 Msa1445030:intron 25.0%
! GTTATTTAACAAACTACTCA+CGG + tig0030904:11946-11965 Msa1445030:intergenic 25.0%
!!! CTACCTTATTTTGTTAATAC+CGG - tig0030904:12447-12466 Msa1445030:intron 25.0%
! ATAATATGATATCTTGTTGC+CGG + tig0030904:12469-12488 Msa1445030:intergenic 25.0%
! CTAAATTGTGAAGATAATAC+CGG - tig0030904:12564-12583 Msa1445030:intron 25.0%
! TATTATGTATCATGAGATCA+AGG - tig0030904:12789-12808 Msa1445030:intron 25.0%
! ATTATGTATCATGAGATCAA+GGG - tig0030904:12790-12809 Msa1445030:intron 25.0%
! CAGTTCCCAAAAAAATATAT+TGG + tig0030904:12955-12974 Msa1445030:intergenic 25.0%
! GATCACAAATTATTACTGTT+CGG + tig0030904:13112-13131 Msa1445030:intergenic 25.0%
!! AACAGTAATAATTTGTGATC+AGG - tig0030904:13112-13131 Msa1445030:intron 25.0%
! GGAAAAATAAATCTCAAAAG+TGG + tig0030904:13752-13771 Msa1445030:intergenic 25.0%
! TACCATCTTATAATTGAACT+TGG - tig0030904:13939-13958 Msa1445030:intron 25.0%
! ACCATCTTATAATTGAACTT+GGG - tig0030904:13940-13959 Msa1445030:intron 25.0%
! ACTACTTAAGCTATATTTCT+AGG - tig0030904:14022-14041 Msa1445030:intron 25.0%
! TAGAGTTTATTAGGTTTGAA+CGG + tig0030904:14087-14106 Msa1445030:intergenic 25.0%
! TAGCTTAAGTAGAGTTTATT+AGG + tig0030904:14096-14115 Msa1445030:intergenic 25.0%
! TCTACTTAAGCTATATTTCT+AGG - tig0030904:14103-14122 Msa1445030:intron 25.0%
!!! TACTGACTTTTCCTTTAATT+GGG - tig0030904:14209-14228 Msa1445030:intron 25.0%
!!! TTAGGTTGTAGAATAGTTTT+TGG - tig0030904:14262-14281 Msa1445030:intron 25.0%
! AAATAAAGATAGAATGCTAG+AGG + tig0030904:14331-14350 Msa1445030:intergenic 25.0%
!!! ATTTTAATGTTGGTTGATAG+TGG - tig0030904:14471-14490 Msa1445030:CDS 25.0%
! ATGCATATTTATCACAATTC+AGG + tig0030904:14631-14650 Msa1445030:intergenic 25.0%
!! GCTCAATTAAATGTATTTTG+TGG - tig0030904:15021-15040 Msa1445030:CDS 25.0%
! CACTATATTATCAGAAAACA+TGG + tig0030904:15057-15076 Msa1445030:intergenic 25.0%
!! TTCCTGATAGTTCTTAATTT+TGG - tig0030904:15180-15199 Msa1445030:CDS 25.0%
! AGTTCATCTTCTAAATTTAC+TGG - tig0030904:15620-15639 Msa1445030:five_prime_UTR 25.0%
! TTATTGTTATCTTACTGACA+TGG - tig0030904:15668-15687 Msa1445030:five_prime_UTR 25.0%
!!! TTGGTGTTGTAACTAAATTT+TGG - tig0030904:15896-15915 Msa1445030:intron 25.0%
! CCATACTCCAAAAAAAATAT+AGG + tig0030904:16003-16022 Msa1445030:intergenic 25.0%
!!! CCTATATTTTTTTTGGAGTA+TGG - tig0030904:16000-16019 Msa1445030:intron 25.0%
!! CTTTTATCCTACATTATACA+AGG + tig0030904:16039-16058 Msa1445030:intergenic 25.0%
!!! AAGAGTAAGTTTTGAAAATG+GGG - tig0030904:16056-16075 Msa1445030:five_prime_UTR 25.0%
AATTTCAGTGAATTCGTGTT+TGG - tig0030904:6529-6548 Msa1445030:intron 30.0%
ATCAAATGATGAATTGCGTT+CGG - tig0030904:6803-6822 Msa1445030:intron 30.0%
TAAGTTCAGTAAAAAGAAGG+AGG - tig0030904:7130-7149 Msa1445030:CDS 30.0%
!! TGATGATTATAATAGTGGGT+TGG - tig0030904:7283-7302 Msa1445030:intron 30.0%
!!! TTTTTTCACATTATTGGGGA+AGG + tig0030904:7408-7427 Msa1445030:intergenic 30.0%
! GCTAATTTCAATGTTTTCTC+AGG - tig0030904:7699-7718 Msa1445030:intron 30.0%
ACATTCTTTATAACCTCATC+TGG + tig0030904:7856-7875 Msa1445030:intergenic 30.0%
AGATGAGGTTATAAAGAATG+TGG - tig0030904:7855-7874 Msa1445030:intron 30.0%
! AAAGGTGACAATTATTTCTC+TGG - tig0030904:7916-7935 Msa1445030:intron 30.0%
!! TTGGTAGTGAATTATTTCTC+TGG - tig0030904:7968-7987 Msa1445030:intron 30.0%
! TCTGGTTTATAATTGCATTG+TGG - tig0030904:7986-8005 Msa1445030:intron 30.0%
AACATGAACCGAAAACATAT+AGG + tig0030904:8014-8033 Msa1445030:intergenic 30.0%
! TATATGTTTTCGGTTCATGT+TGG - tig0030904:8013-8032 Msa1445030:intron 30.0%
! GGAAAATGTGCTAATTTTTG+TGG - tig0030904:8063-8082 Msa1445030:intron 30.0%
! ATTATTTGCTGGCAAGTTAT+TGG - tig0030904:8092-8111 Msa1445030:intron 30.0%
! TCTTTCCTAGTACACTTTTA+TGG - tig0030904:8231-8250 Msa1445030:intron 30.0%
ATAAACCTCTCGTAAATGTA+AGG - tig0030904:8255-8274 Msa1445030:intron 30.0%
! TTTTACCTTACATTTACGAG+AGG + tig0030904:8263-8282 Msa1445030:intergenic 30.0%
ATAAAACTCCCACTATAACA+AGG + tig0030904:8346-8365 Msa1445030:intergenic 30.0%
TACTTGGGTAGAGAAATATA+TGG + tig0030904:8427-8446 Msa1445030:intergenic 30.0%
AGTGTAGATTATACAGAAGA+TGG + tig0030904:8478-8497 Msa1445030:intergenic 30.0%
TGTTAGAAACTCAAGTCAAA+AGG + tig0030904:8503-8522 Msa1445030:intergenic 30.0%
CTCATAAATATCGAAGTAGA+TGG + tig0030904:8560-8579 Msa1445030:intergenic 30.0%
!!! ACTTAAGCTTTTGGAACATT+TGG + tig0030904:8771-8790 Msa1445030:intergenic 30.0%
! TGTTTCTTTTGCTTTGCTTT+TGG - tig0030904:8969-8988 Msa1445030:intron 30.0%
!!! GTGCTGTATTTTTTTTGAGT+TGG + tig0030904:9073-9092 Msa1445030:intergenic 30.0%
AAATACAGCACAAAGTATAC+TGG - tig0030904:9082-9101 Msa1445030:intron 30.0%
CAAACTGAACATGCAATAAT+TGG + tig0030904:9200-9219 Msa1445030:intergenic 30.0%
CAATTATTGCATGTTCAGTT+TGG - tig0030904:9198-9217 Msa1445030:intron 30.0%
! TTGATATGATTTATAACGGG+CGG + tig0030904:9519-9538 Msa1445030:intergenic 30.0%
AACAAGATCGAAATTTAGGT+TGG + tig0030904:9619-9638 Msa1445030:intergenic 30.0%
TTCCGCCAAATAACAAAATA+TGG + tig0030904:9697-9716 Msa1445030:intergenic 30.0%
TCACTAACAATTAAGCTTGT+TGG + tig0030904:9883-9902 Msa1445030:intergenic 30.0%
ATATCAAATCCAATCCAATG+TGG + tig0030904:9991-10010 Msa1445030:intergenic 30.0%
! ACATTGGATTGGATTTGATA+TGG - tig0030904:9990-10009 Msa1445030:intron 30.0%
TTGTGTTAAGAGTTCCATAT+TGG - tig0030904:10185-10204 Msa1445030:CDS 30.0%
! CTAAGAATTAAGAGTGTGTT+TGG - tig0030904:10302-10321 Msa1445030:intron 30.0%
GAGGAAATGTAATGTTATGA+GGG + tig0030904:10394-10413 Msa1445030:intergenic 30.0%
TGAGGAAATGTAATGTTATG+AGG + tig0030904:10395-10414 Msa1445030:intergenic 30.0%
AGTATCTTGAACTTTGTCTT+AGG - tig0030904:10526-10545 Msa1445030:intron 30.0%
TTAATTAGGATTAGGAGTCT+AGG - tig0030904:10637-10656 Msa1445030:CDS 30.0%
AAGACATGAGAAAGAACTTA+CGG + tig0030904:10701-10720 Msa1445030:intergenic 30.0%
TGCCTATATCCAAATGAATT+AGG + tig0030904:10764-10783 Msa1445030:intergenic 30.0%
TGTGAATATACAAGAAGGAA+AGG + tig0030904:11319-11338 Msa1445030:intergenic 30.0%
CTAAGAAAACTCTATTCACA+TGG + tig0030904:11501-11520 Msa1445030:intergenic 30.0%
! CATGTGAATAGAGTTTTCTT+AGG - tig0030904:11499-11518 Msa1445030:intron 30.0%
!!! GAATTGCATTTTGCTTTTTC+AGG - tig0030904:11540-11559 Msa1445030:intron 30.0%
!!! AGGTTACTTTTTATGCCTAA+TGG - tig0030904:11578-11597 Msa1445030:intron 30.0%
! GCTTTATAACATTTTGTTCG+TGG - tig0030904:11861-11880 Msa1445030:intron 30.0%
AAATGGTCAAAACCTTACTA+CGG - tig0030904:12081-12100 Msa1445030:intron 30.0%
ACTTGAGAAACTGATATTGT+TGG + tig0030904:12336-12355 Msa1445030:intergenic 30.0%
AAATAAGGTAGAAAGAAACC+AGG + tig0030904:12438-12457 Msa1445030:intergenic 30.0%
TTGCCGGTATTAACAAAATA+AGG + tig0030904:12453-12472 Msa1445030:intergenic 30.0%
TAAAGAACCAGAATATGAAG+TGG - tig0030904:12635-12654 Msa1445030:intron 30.0%
AAAGAACCAGAATATGAAGT+GGG - tig0030904:12636-12655 Msa1445030:intron 30.0%
ATATCAAAGCAATCACATTC+TGG - tig0030904:12710-12729 Msa1445030:intron 30.0%
!!! ATATTTTTTTGGGAACTGTG+AGG - tig0030904:12957-12976 Msa1445030:intron 30.0%
!!! TATTTTTTTGGGAACTGTGA+GGG - tig0030904:12958-12977 Msa1445030:intron 30.0%
AAATAAAGCTTAATGCTGAC+TGG + tig0030904:13014-13033 Msa1445030:intergenic 30.0%
!!! ATTTTTTTGGATTGATCGAC+AGG - tig0030904:13054-13073 Msa1445030:intron 30.0%
!!! TTTTTTTGGATTGATCGACA+GGG - tig0030904:13055-13074 Msa1445030:intron 30.0%
! TCACATGGATATTTTCTACA+AGG + tig0030904:13290-13309 Msa1445030:intergenic 30.0%
AAGAAAACACAAGTATCACA+TGG + tig0030904:13305-13324 Msa1445030:intergenic 30.0%
!!! TCACATGCTATTTTTACTAC+AGG - tig0030904:13341-13360 Msa1445030:intron 30.0%
! ATCCAATGGAGAATTTTAAG+TGG - tig0030904:13531-13550 Msa1445030:intron 30.0%
!!! ATTTTTCGAGTGAGTGTTTA+TGG - tig0030904:13603-13622 Msa1445030:intron 30.0%
CCATATACAGCAAAAATTCA+AGG + tig0030904:13647-13666 Msa1445030:intergenic 30.0%
!! CCTTGAATTTTTGCTGTATA+TGG - tig0030904:13644-13663 Msa1445030:intron 30.0%
!!! TGTCAAAAATCTGGTTTTCA+TGG - tig0030904:13686-13705 Msa1445030:intron 30.0%
!! CAAAAGTGGGTTTTATAGTA+AGG + tig0030904:13738-13757 Msa1445030:intergenic 30.0%
TCCCAAGTTCAATTATAAGA+TGG + tig0030904:13944-13963 Msa1445030:intergenic 30.0%
!!! CTACTGACTTTTCCTTTAAT+TGG - tig0030904:14208-14227 Msa1445030:intron 30.0%
ATCTCAGTAAACCCAATTAA+AGG + tig0030904:14223-14242 Msa1445030:intergenic 30.0%
TTTAATTGGGTTTACTGAGA+TGG - tig0030904:14222-14241 Msa1445030:intron 30.0%
TTAATTGGGTTTACTGAGAT+GGG - tig0030904:14223-14242 Msa1445030:intron 30.0%
TGATTCCTGTTATGGTATAT+GGG - tig0030904:14432-14451 Msa1445030:CDS 30.0%
ATGATGCATTTGTCAACAAT+GGG - tig0030904:14868-14887 Msa1445030:CDS 30.0%
TTCTTAACTAGTGTCCTTAT+GGG + tig0030904:14942-14961 Msa1445030:intergenic 30.0%
TTTCTTAACTAGTGTCCTTA+TGG + tig0030904:14943-14962 Msa1445030:intergenic 30.0%
!! GTGTATTTTGAATTTTGTGC+AGG - tig0030904:15074-15093 Msa1445030:CDS 30.0%
!! AATATTTCTGGCCAAGAATT+CGG - tig0030904:15100-15119 Msa1445030:CDS 30.0%
!!! CGTTTTAATTGTGAAGTATG+TGG - tig0030904:15138-15157 Msa1445030:CDS 30.0%
GACCAAAATTAAGAACTATC+AGG + tig0030904:15185-15204 Msa1445030:intergenic 30.0%
ATGTTAATAGAGCTTATCGT+TGG + tig0030904:15438-15457 Msa1445030:intergenic 30.0%
TTCTCTAAATGTAGAAAAGC+TGG - tig0030904:15519-15538 Msa1445030:CDS 30.0%
TCCATTTGGACTAAGAAATT+AGG - tig0030904:15568-15587 Msa1445030:CDS 30.0%
!! CTTTAAGATGTTTGGTTAAC+TGG + tig0030904:15803-15822 Msa1445030:intergenic 30.0%
GTTAACCAAACATCTTAAAG+AGG - tig0030904:15803-15822 Msa1445030:intron 30.0%
!! CGACAGAATGATGTTTTATT+TGG - tig0030904:15877-15896 Msa1445030:intron 30.0%
TAGAAGTAATGTTACAGTGA+GGG + tig0030904:15946-15965 Msa1445030:intergenic 30.0%
ATAGAAGTAATGTTACAGTG+AGG + tig0030904:15947-15966 Msa1445030:intergenic 30.0%
ACTCGATTCATGTCTCTTTA+AGG - tig0030904:6184-6203 Msa1445030:three_prime_UTR 35.0%
CAAATCCAAACACGTTGAAT+CGG + tig0030904:6237-6256 Msa1445030:intergenic 35.0%
!!! CTCTGTTAGTTGGTTTTGAT+GGG - tig0030904:6633-6652 Msa1445030:CDS 35.0%
!! AGAATTGGTTGATGGAAAGA+CGG - tig0030904:6677-6696 Msa1445030:CDS 35.0%
TTTCAGTATCAGCAACACAT+TGG + tig0030904:6746-6765 Msa1445030:intergenic 35.0%
TGTTCTGTTGCAGAAACATT+TGG + tig0030904:6840-6859 Msa1445030:intergenic 35.0%
TTGGCTGCTAATATCATGAA+AGG + tig0030904:6871-6890 Msa1445030:intergenic 35.0%
ATGGCTAACATTCTCAGATT+CGG + tig0030904:6898-6917 Msa1445030:intergenic 35.0%
AGTGACTATGGATATAGCTA+TGG - tig0030904:7200-7219 Msa1445030:intron 35.0%
GTGACTATGGATATAGCTAT+GGG - tig0030904:7201-7220 Msa1445030:intron 35.0%
TATGGATATAGCTATGGGAA+TGG - tig0030904:7206-7225 Msa1445030:intron 35.0%
TACAACTCCGAATCTTCATA+AGG + tig0030904:7338-7357 Msa1445030:intergenic 35.0%
!! AATTATTAGGTTGAGCTCGA+TGG - tig0030904:7559-7578 Msa1445030:intron 35.0%
!! ATTATTAGGTTGAGCTCGAT+GGG - tig0030904:7560-7579 Msa1445030:intron 35.0%
! TTGTGGAGCCTATATGTTTT+CGG - tig0030904:8003-8022 Msa1445030:intron 35.0%
TCAAATAATGACATGTGTGC+TGG - tig0030904:8041-8060 Msa1445030:intron 35.0%
CAAATAATGACATGTGTGCT+GGG - tig0030904:8042-8061 Msa1445030:intron 35.0%
TGTGGGTTTAGATTATTTGC+TGG - tig0030904:8081-8100 Msa1445030:intron 35.0%
CTTTATCTTGTTGATGTCCA+CGG - tig0030904:8449-8468 Msa1445030:intron 35.0%
!! GCATTCTAAAAGCACTTAAG+TGG - tig0030904:8636-8655 Msa1445030:CDS 35.0%
!!! CTTTTGGAACATTTGGTGAT+TGG + tig0030904:8764-8783 Msa1445030:intergenic 35.0%
! TTCCAAAAGCTTAAGTTGCT+AGG - tig0030904:8775-8794 Msa1445030:CDS 35.0%
ATGTATACCAATGCAAGTTG+CGG + tig0030904:8907-8926 Msa1445030:intergenic 35.0%
GTTTACCTGTTGTATGTATG+AGG + tig0030904:9112-9131 Msa1445030:intergenic 35.0%
AAGTAGTTAGTGACATCGTT+AGG - tig0030904:9327-9346 Msa1445030:intron 35.0%
AATTCTATTGCAGCATGACT+TGG + tig0030904:9570-9589 Msa1445030:intergenic 35.0%
! AGGTCTCCTTAATTTTCTTG+TGG - tig0030904:9661-9680 Msa1445030:CDS 35.0%
GATCGTTAATGGAAATTTCC+TGG + tig0030904:9744-9763 Msa1445030:intergenic 35.0%
GATATTGGACTGATCGTTAA+TGG + tig0030904:9755-9774 Msa1445030:intergenic 35.0%
! ATTGTTAGTGAGCTTTAGCT+TGG - tig0030904:9892-9911 Msa1445030:intron 35.0%
!! ATGTGTTAAGAGTACCACAT+TGG - tig0030904:9974-9993 Msa1445030:intron 35.0%
!! TTAAGAGTACCACATTGGAT+TGG - tig0030904:9979-9998 Msa1445030:intron 35.0%
! ACCATCTTAGAATTTGGGTT+GGG + tig0030904:10082-10101 Msa1445030:intergenic 35.0%
TACCATCTTAGAATTTGGGT+TGG + tig0030904:10083-10102 Msa1445030:intergenic 35.0%
! ATTAAGAGTGTGTTTGGATG+AGG - tig0030904:10308-10327 Msa1445030:CDS 35.0%
TGTGTTTGGATGAGGTAATT+TGG - tig0030904:10316-10335 Msa1445030:CDS 35.0%
GAGGGAATTCAAATACTTAG+AGG + tig0030904:10376-10395 Msa1445030:intergenic 35.0%
GGGAATGTAATGTAATGTTG+AGG + tig0030904:10413-10432 Msa1445030:intergenic 35.0%
TGAATTCCATTGTTTGGATG+GGG + tig0030904:10434-10453 Msa1445030:intergenic 35.0%
GTGAATTCCATTGTTTGGAT+GGG + tig0030904:10435-10454 Msa1445030:intergenic 35.0%
TTGAGGTGAATTCCATTGTT+TGG + tig0030904:10440-10459 Msa1445030:intergenic 35.0%
GAGGGAATTCAAATACTTTG+AGG + tig0030904:10457-10476 Msa1445030:intergenic 35.0%
AGATACTCTTAGAGTGTGTT+TGG + tig0030904:10513-10532 Msa1445030:intergenic 35.0%
AGGCAACCTTCTTAGAATTA+AGG - tig0030904:10779-10798 Msa1445030:intron 35.0%
ACCTTCTTAGAATTAAGGCT+TGG - tig0030904:10784-10803 Msa1445030:intron 35.0%
TAGTTCAACCCTTACAAAAC+CGG - tig0030904:10809-10828 Msa1445030:intron 35.0%
!! AATTAGTCTTATCCACAAGC+CGG + tig0030904:10831-10850 Msa1445030:intergenic 35.0%
! CTAAGTTTTCAGAAATGCTG+TGG + tig0030904:10960-10979 Msa1445030:intergenic 35.0%
TATACCTGAGTAGTAAGTGT+AGG + tig0030904:11368-11387 Msa1445030:intergenic 35.0%
TTTGACATAGTAAGCCAACT+CGG + tig0030904:11618-11637 Msa1445030:intergenic 35.0%
! CGTGCTTTTCAGAAATTACT+TGG - tig0030904:11728-11747 Msa1445030:intron 35.0%
! GCTTTTCAGAAATTACTTGG+AGG - tig0030904:11731-11750 Msa1445030:intron 35.0%
TTACTTGGAGGTTACAAACA+AGG - tig0030904:11743-11762 Msa1445030:intron 35.0%
GTTGTTGTGATATAGAGGTA+TGG - tig0030904:11783-11802 Msa1445030:intron 35.0%
AGGTATGGTCATATACCTAT+TGG - tig0030904:11798-11817 Msa1445030:intron 35.0%
! ATCCATTGGAAGCATATATG+TGG + tig0030904:12030-12049 Msa1445030:intergenic 35.0%
! ATCATGAAGTGTCAATCCAT+TGG + tig0030904:12044-12063 Msa1445030:intergenic 35.0%
ATAGCTCTCTCTTTAGCAAA+TGG - tig0030904:12064-12083 Msa1445030:intron 35.0%
AATGGTCAAAACCTTACTAC+GGG - tig0030904:12082-12101 Msa1445030:intron 35.0%
GGAGATTTGATTCTTTGCAA+TGG - tig0030904:12142-12161 Msa1445030:intron 35.0%
ATCACATTCTGGCAACTTTA+TGG - tig0030904:12721-12740 Msa1445030:intron 35.0%
ATTCTGGCAACTTTATGGAA+AGG - tig0030904:12726-12745 Msa1445030:intron 35.0%
CTGCTAAAGATAGTTCAGTT+TGG - tig0030904:12894-12913 Msa1445030:intron 35.0%
!!! TGTTATTTTCCAGTGTGAGA+AGG - tig0030904:13205-13224 Msa1445030:intron 35.0%
! TGGATATTTTCTACAAGGCT+TGG + tig0030904:13285-13304 Msa1445030:intergenic 35.0%
CAACAAAACCACTTATCCTT+GGG + tig0030904:13372-13391 Msa1445030:intergenic 35.0%
ACAACAAAACCACTTATCCT+TGG + tig0030904:13373-13392 Msa1445030:intergenic 35.0%
! ACTAATAATCAGGAAGCATG+AGG - tig0030904:13473-13492 Msa1445030:intron 35.0%
GAGACATGAATGATATCCAA+TGG - tig0030904:13517-13536 Msa1445030:intron 35.0%
! TGCCACTTAAAATTCTCCAT+TGG + tig0030904:13536-13555 Msa1445030:intergenic 35.0%
TGTCTTCTAAATCCATCGTT+GGG + tig0030904:13913-13932 Msa1445030:intergenic 35.0%
! CAAGATCATTTTGCAAAACG+AGG - tig0030904:13979-13998 Msa1445030:intron 35.0%
TAATTGGGTTTACTGAGATG+GGG - tig0030904:14224-14243 Msa1445030:intron 35.0%
CATATACCATAACAGGAATC+AGG + tig0030904:14433-14452 Msa1445030:intergenic 35.0%
CTGATTCCTGTTATGGTATA+TGG - tig0030904:14431-14450 Msa1445030:CDS 35.0%
GTGTACAATAACTAACCACT+GGG + tig0030904:14538-14557 Msa1445030:intergenic 35.0%
TGTGTACAATAACTAACCAC+TGG + tig0030904:14539-14558 Msa1445030:intergenic 35.0%
TTAGCTTCAACATATGGCAT+TGG + tig0030904:14607-14626 Msa1445030:intergenic 35.0%
! TCAGGTTTAGCTTCAACATA+TGG + tig0030904:14613-14632 Msa1445030:intergenic 35.0%
ATTGATTATGTAGAGGAGAG+GGG + tig0030904:14676-14695 Msa1445030:intergenic 35.0%
! CATTGATTATGTAGAGGAGA+GGG + tig0030904:14677-14696 Msa1445030:intergenic 35.0%
! ATCGACCATTGATTATGTAG+AGG + tig0030904:14683-14702 Msa1445030:intergenic 35.0%
TCTACATAATCAATGGTCGA+TGG - tig0030904:14682-14701 Msa1445030:intron 35.0%
!! ATTGCGTAAGAGCATGTTTT+AGG - tig0030904:14731-14750 Msa1445030:intron 35.0%
!! TTGCGTAAGAGCATGTTTTA+GGG - tig0030904:14732-14751 Msa1445030:intron 35.0%
GAAAAAATTCCTGTGAACGA+TGG + tig0030904:14779-14798 Msa1445030:intergenic 35.0%
GATGATGCATTTGTCAACAA+TGG - tig0030904:14867-14886 Msa1445030:CDS 35.0%
!! ATATTTCTGGCCAAGAATTC+GGG - tig0030904:15101-15120 Msa1445030:CDS 35.0%
AGTTCTATTGTAGTATCTGC+CGG - tig0030904:15234-15253 Msa1445030:CDS 35.0%
GCTTGAAAATAACCCTGAAA+GGG + tig0030904:15469-15488 Msa1445030:intergenic 35.0%
GCCTAATTTCTTAGTCCAAA+TGG + tig0030904:15572-15591 Msa1445030:intergenic 35.0%
TTTCTTCCAATTCTGAACTC+AGG + tig0030904:15719-15738 Msa1445030:intergenic 35.0%
!! CACTGATGTTTTGTTGAAGA+GGG + tig0030904:15838-15857 Msa1445030:intergenic 35.0%
TACTTCTATGTTCTTGCTCT+TGG - tig0030904:15958-15977 Msa1445030:intron 35.0%
! TCCTCTACTTCTACCATTTT+AGG + tig0030904:16089-16108 Msa1445030:intergenic 35.0%
!! TCATGTTGAATTGACTTGCA+TGG - tig0030904:16195-16214 Msa1445030:five_prime_UTR 35.0%
AAGAATTGAAGAGAGCGAAG+AGG + tig0030904:5995-6014 None:intergenic 40.0%
AAGTGTTCGTGGTTGAGATT+TGG + tig0030904:6034-6053 None:intergenic 40.0%
! AGAGTGTTAGGGTTTGGTTT+AGG + tig0030904:6098-6117 None:intergenic 40.0%
!! TTGGAGAGAGAAGAGTGTTA+GGG + tig0030904:6109-6128 None:intergenic 40.0%
!! ATTGGAGAGAGAAGAGTGTT+AGG + tig0030904:6110-6129 None:intergenic 40.0%
! AGAAGTGTAGTGAAGGAGAT+TGG + tig0030904:6128-6147 None:intergenic 40.0%
! AACAGTGAGAAGTGTAGTGA+AGG + tig0030904:6135-6154 None:intergenic 40.0%
!! TCTTACCGATTCAACGTGTT+TGG - tig0030904:6229-6248 Msa1445030:three_prime_UTR 40.0%
CAGCATGCACGAATAAATCA+AGG + tig0030904:6555-6574 Msa1445030:intergenic 40.0%
ATTTATTCGTGCATGCTGTG+CGG - tig0030904:6557-6576 Msa1445030:intron 40.0%
!!! GCTCTGTTAGTTGGTTTTGA+TGG - tig0030904:6632-6651 Msa1445030:CDS 40.0%
AGCAGTTTGTGTGCAAGAAT+TGG - tig0030904:6662-6681 Msa1445030:CDS 40.0%
TGTGTGCAAGAATTGGTTGA+TGG - tig0030904:6669-6688 Msa1445030:CDS 40.0%
AAATACCGAGGAATCAAGGT+TGG - tig0030904:6701-6720 Msa1445030:CDS 40.0%
CAATTCCAACCTTGATTCCT+CGG + tig0030904:6709-6728 Msa1445030:intergenic 40.0%
! CTAACATTCTCAGATTCGGT+CGG + tig0030904:6894-6913 Msa1445030:intergenic 40.0%
GATGATTACCAAACACCTAC+TGG - tig0030904:7158-7177 Msa1445030:intron 40.0%
AGTGGATATGGCTATGGATA+TGG - tig0030904:7230-7249 Msa1445030:intron 40.0%
GGCTATGGATATGGTTATCA+CGG - tig0030904:7239-7258 Msa1445030:intron 40.0%
GCTATGGATATGGTTATCAC+GGG - tig0030904:7240-7259 Msa1445030:intron 40.0%
CTATGGATATGGTTATCACG+GGG - tig0030904:7241-7260 Msa1445030:intron 40.0%
TCACGGGGATGATGAATATT+TGG - tig0030904:7256-7275 Msa1445030:intron 40.0%
GAAGATTCGGAGTTGTATTC+TGG - tig0030904:7341-7360 Msa1445030:intron 40.0%
GGAGTTGTATTCTGGCAATA+TGG - tig0030904:7349-7368 Msa1445030:intron 40.0%
TTATCAACCGGTATCCTTGA+TGG - tig0030904:7431-7450 Msa1445030:intron 40.0%
ATCTGCTCTTTACCTTTCCA+GGG + tig0030904:7481-7500 Msa1445030:intergenic 40.0%
AATCTGCTCTTTACCTTTCC+AGG + tig0030904:7482-7501 Msa1445030:intergenic 40.0%
GAGGTTATAAAGAATGTGGC+TGG - tig0030904:7859-7878 Msa1445030:intron 40.0%
AATTGTCACCTTTCCAAACC+TGG + tig0030904:7909-7928 Msa1445030:intergenic 40.0%
ACTATAACAAGGTCCAAGGA+AGG + tig0030904:8335-8354 Msa1445030:intergenic 40.0%
! TTCCTTGGACCTTGTTATAG+TGG - tig0030904:8334-8353 Msa1445030:intron 40.0%
! TCCTTGGACCTTGTTATAGT+GGG - tig0030904:8335-8354 Msa1445030:intron 40.0%
TTCTCCTCCTCTCTTATCTA+GGG - tig0030904:8378-8397 Msa1445030:intron 40.0%
TATACAGAAGATGGAATCCG+TGG + tig0030904:8469-8488 Msa1445030:intergenic 40.0%
TCGCAATCATGATAGTCGTT+TGG - tig0030904:8717-8736 Msa1445030:CDS 40.0%
TGATAGTCGTTTGGTCATCT+AGG - tig0030904:8726-8745 Msa1445030:CDS 40.0%
! CACCTAGCAACTTAAGCTTT+TGG + tig0030904:8780-8799 Msa1445030:intergenic 40.0%
TTATCATTGCACAGCATCCA+CGG - tig0030904:8830-8849 Msa1445030:CDS 40.0%
!! TTTTGCTTTGCTTTTGGACC+TGG - tig0030904:8975-8994 Msa1445030:CDS 40.0%
ATTGGGTCCAAACTGGATTT+GGG + tig0030904:9182-9201 Msa1445030:intergenic 40.0%
AATTGGGTCCAAACTGGATT+TGG + tig0030904:9183-9202 Msa1445030:intergenic 40.0%
TGCAATAATTGGGTCCAAAC+TGG + tig0030904:9189-9208 Msa1445030:intergenic 40.0%
GACGGAGAGAATAATAACTG+AGG + tig0030904:9224-9243 Msa1445030:intergenic 40.0%
TAGTTAGTGACATCGTTAGG+TGG - tig0030904:9330-9349 Msa1445030:intron 40.0%
!! TATGATTTATAACGGGCGGT+TGG + tig0030904:9515-9534 Msa1445030:intergenic 40.0%
ATGCTGCAATAGAATTTCCC+TGG - tig0030904:9574-9593 Msa1445030:CDS 40.0%
CAATAGAATTTCCCTGGCTA+TGG - tig0030904:9580-9599 Msa1445030:CDS 40.0%
! AAGTCTTAGTTCTTGTTGCC+AGG - tig0030904:9723-9742 Msa1445030:intron 40.0%
TTCACAAAACATGACTGCAG+AGG + tig0030904:9818-9837 Msa1445030:intergenic 40.0%
!! TTAGTGAGCTTTAGCTTGGT+GGG - tig0030904:9896-9915 Msa1445030:intron 40.0%
ACCTTGCAAACCTGTTGTAA+GGG - tig0030904:10046-10065 Msa1445030:intron 40.0%
ATAGTCTATCCAAGATCCGT+CGG - tig0030904:10105-10124 Msa1445030:CDS 40.0%
AAGTTCAACCCTCACAAAAG+CGG + tig0030904:10266-10285 Msa1445030:intergenic 40.0%
GAATTCCATTGTTTGGATGG+GGG + tig0030904:10433-10452 Msa1445030:intergenic 40.0%
GGTGAATTCCATTGTTTGGA+TGG + tig0030904:10436-10455 Msa1445030:intergenic 40.0%
GAGGGAATGTAATGTTGTGA+GGG + tig0030904:10475-10494 Msa1445030:intergenic 40.0%
TGAGGGAATGTAATGTTGTG+AGG + tig0030904:10476-10495 Msa1445030:intergenic 40.0%
TCTTAGAGTGTGTTTGGATG+GGG + tig0030904:10507-10526 Msa1445030:intergenic 40.0%
CTCTTAGAGTGTGTTTGGAT+GGG + tig0030904:10508-10527 Msa1445030:intergenic 40.0%
ACTCTTAGAGTGTGTTTGGA+TGG + tig0030904:10509-10528 Msa1445030:intergenic 40.0%
GAAAGAACTTACGGAGACTA+TGG + tig0030904:10692-10711 Msa1445030:intergenic 40.0%
! GCCAAGCCTTAATTCTAAGA+AGG + tig0030904:10788-10807 Msa1445030:intergenic 40.0%
!! GGTTTTGTAAGGGTTGAACT+AGG + tig0030904:10810-10829 Msa1445030:intergenic 40.0%
! CCAAGTTTTCAGAAATGCTG+TGG + tig0030904:10860-10879 Msa1445030:intergenic 40.0%
! CCACAGCATTTCTGAAAACT+TGG - tig0030904:10857-10876 Msa1445030:CDS 40.0%
CGCACTTTCTATAGATTGAC+TGG + tig0030904:11096-11115 Msa1445030:intergenic 40.0%
CTGATGGTTGCACTAAGAAA+AGG - tig0030904:11404-11423 Msa1445030:intron 40.0%
! GAGTTGGCTTACTATGTCAA+AGG - tig0030904:11617-11636 Msa1445030:intron 40.0%
GGAGGTTACAAACAAGGAAA+TGG - tig0030904:11749-11768 Msa1445030:intron 40.0%
CAAGGAAATGGTATAGTCTG+TGG - tig0030904:11761-11780 Msa1445030:intron 40.0%
CTGTGGTTGTTGTGATATAG+AGG - tig0030904:11778-11797 Msa1445030:intron 40.0%
!! AATATGTAGTCGGTGCCAAT+AGG + tig0030904:11816-11835 Msa1445030:intergenic 40.0%
! CATTGGAAGCATATATGTGG+CGG + tig0030904:12027-12046 Msa1445030:intergenic 40.0%
TTCTTTGCAATGGATGTCCT+AGG - tig0030904:12152-12171 Msa1445030:intron 40.0%
TCTTTGCAATGGATGTCCTA+GGG - tig0030904:12153-12172 Msa1445030:intron 40.0%
AATACTGCACTGGATAACAG+AGG + tig0030904:12386-12405 Msa1445030:intergenic 40.0%
!! GATGAAGTTTGTTGCATACC+TGG - tig0030904:12417-12436 Msa1445030:intron 40.0%
TATTTCAATTGCAGCCTGCT+TGG - tig0030904:12506-12525 Msa1445030:intron 40.0%
ATTTCAATTGCAGCCTGCTT+GGG - tig0030904:12507-12526 Msa1445030:intron 40.0%
GATAATACCGGTGATGAAAG+AGG - tig0030904:12576-12595 Msa1445030:intron 40.0%
CAATCATGATACGGTTGACA+CGG - tig0030904:12607-12626 Msa1445030:intron 40.0%
AATCATGATACGGTTGACAC+GGG - tig0030904:12608-12627 Msa1445030:intron 40.0%
!! TGTGAGAAGGAGTATCATGT+TGG - tig0030904:13218-13237 Msa1445030:intron 40.0%
! AGTATCATGTTGGTTGCTTG+CGG - tig0030904:13228-13247 Msa1445030:intron 40.0%
CGACTGCAATCGAATATATG+TGG - tig0030904:13395-13414 Msa1445030:intron 40.0%
TACCATACCATCTTCCTTGT+CGG - tig0030904:13449-13468 Msa1445030:intron 40.0%
ATTAGTTCCGACAAGGAAGA+TGG + tig0030904:13459-13478 Msa1445030:intergenic 40.0%
CCTGATTATTAGTTCCGACA+AGG + tig0030904:13466-13485 Msa1445030:intergenic 40.0%
CCTTGTCGGAACTAATAATC+AGG - tig0030904:13463-13482 Msa1445030:intron 40.0%
TTCTACATACCCTTTCACAC+CGG - tig0030904:13854-13873 Msa1445030:intron 40.0%
GTGTCTTCTAAATCCATCGT+TGG + tig0030904:13914-13933 Msa1445030:intergenic 40.0%
GTGTTAACTGTGGAGTCTTT+GGG + tig0030904:14172-14191 Msa1445030:intergenic 40.0%
AGTGTTAACTGTGGAGTCTT+TGG + tig0030904:14173-14192 Msa1445030:intergenic 40.0%
GGAAAAGTCAGTAGTTGCTT+TGG + tig0030904:14202-14221 Msa1445030:intergenic 40.0%
AATTGGGTTTACTGAGATGG+GGG - tig0030904:14225-14244 Msa1445030:intron 40.0%
! ACTGCATTTTGTTCATGCTC+TGG - tig0030904:14355-14374 Msa1445030:CDS 40.0%
GCTTACCCATATACCATAAC+AGG + tig0030904:14440-14459 Msa1445030:intergenic 40.0%
GGAAAGAAGGTTGTATAGAG+AGG + tig0030904:14500-14519 Msa1445030:intergenic 40.0%
! CCATTGATTATGTAGAGGAG+AGG + tig0030904:14678-14697 Msa1445030:intergenic 40.0%
CCTCTCCTCTACATAATCAA+TGG - tig0030904:14675-14694 Msa1445030:intron 40.0%
CGATGGAAAACCTAGTTGAT+AGG - tig0030904:14699-14718 Msa1445030:intron 40.0%
TTGTGCAGGCGAAATATTTC+TGG - tig0030904:15088-15107 Msa1445030:CDS 40.0%
!! TATTTCTGGCCAAGAATTCG+GGG - tig0030904:15102-15121 Msa1445030:CDS 40.0%
AATACATTCCCCCGAATTCT+TGG + tig0030904:15114-15133 Msa1445030:intergenic 40.0%
GTTCTATTGTAGTATCTGCC+GGG - tig0030904:15235-15254 Msa1445030:CDS 40.0%
! AACATGCGATTTTCCCTTTC+AGG - tig0030904:15453-15472 Msa1445030:CDS 40.0%
! ACATGCGATTTTCCCTTTCA+GGG - tig0030904:15454-15473 Msa1445030:CDS 40.0%
CGCTTGAAAATAACCCTGAA+AGG + tig0030904:15470-15489 Msa1445030:intergenic 40.0%
TCACAAGATGAGTGAAGATC+AGG - tig0030904:15594-15613 Msa1445030:exon 40.0%
GACATGGCATACTAAGAGAA+TGG - tig0030904:15684-15703 Msa1445030:five_prime_UTR 40.0%
TGTTGACCTGAGTTCAGAAT+TGG - tig0030904:15710-15729 Msa1445030:five_prime_UTR 40.0%
!! CTGCACCTCTTTAAGATGTT+TGG + tig0030904:15811-15830 Msa1445030:intergenic 40.0%
!! GCACTGATGTTTTGTTGAAG+AGG + tig0030904:15839-15858 Msa1445030:intergenic 40.0%
CTTCAACAAAACATCAGTGC+TGG - tig0030904:15839-15858 Msa1445030:intron 40.0%
! AACATCAGTGCTGGAAAAGA+TGG - tig0030904:15848-15867 Msa1445030:intron 40.0%
!!! TTTTGGAGTATGGGTGATTG+TGG - tig0030904:16010-16029 Msa1445030:intron 40.0%
!!! AGTTTTGAAAATGGGGAACG+TGG - tig0030904:16063-16082 Msa1445030:five_prime_UTR 40.0%
GCCTAAAATGGTAGAAGTAG+AGG - tig0030904:16085-16104 Msa1445030:five_prime_UTR 40.0%
!! GAATTGACTTGCATGGTTCT+TGG - tig0030904:16202-16221 Msa1445030:five_prime_UTR 40.0%
! AGAGAAAAGTGAGAGAGTGC+GGG + tig0030904:6061-6080 None:intergenic 45.0%
GAGAGAAAAGTGAGAGAGTG+CGG + tig0030904:6062-6081 None:intergenic 45.0%
! GGGTTTGGTTTAGGAACGAA+AGG + tig0030904:6089-6108 None:intergenic 45.0%
!! GAGAGAAGAGTGTTAGGGTT+TGG + tig0030904:6104-6123 None:intergenic 45.0%
TTCTCAGAGGCTCTGTTAGT+TGG - tig0030904:6623-6642 Msa1445030:intron 45.0%
TGGAAAGACGGAAAATACCG+AGG - tig0030904:6689-6708 Msa1445030:CDS 45.0%
CGGAAAATACCGAGGAATCA+AGG - tig0030904:6697-6716 Msa1445030:CDS 45.0%
AATGTTAGCCATGCAGAGTG+TGG - tig0030904:6906-6925 Msa1445030:intron 45.0%
ATGTTAGCCATGCAGAGTGT+GGG - tig0030904:6907-6926 Msa1445030:intron 45.0%
! GGAACTGACATCTACTGGTT+TGG - tig0030904:6929-6948 Msa1445030:CDS 45.0%
ACTCACGGTATCATGAGAAC+TGG + tig0030904:6961-6980 Msa1445030:intergenic 45.0%
AACACCAGCTTCATCACTCA+CGG + tig0030904:6976-6995 Msa1445030:intergenic 45.0%
TGAGTGATGAAGCTGGTGTT+CGG - tig0030904:6976-6995 Msa1445030:CDS 45.0%
TCGGGATTTCCATCACAACA+CGG + tig0030904:7073-7092 Msa1445030:intergenic 45.0%
TATAGCTATGGGAATGGCAG+TGG - tig0030904:7212-7231 Msa1445030:intron 45.0%
TATGGGAATGGCAGTGGATA+TGG - tig0030904:7218-7237 Msa1445030:intron 45.0%
AATGGCAGTGGATATGGCTA+TGG - tig0030904:7224-7243 Msa1445030:intron 45.0%
!! ACATTATTGGGGAAGGCGTT+TGG + tig0030904:7401-7420 Msa1445030:intergenic 45.0%
ATTTCACTGCAGCTCCATCA+AGG + tig0030904:7448-7467 Msa1445030:intergenic 45.0%
GTTGAGCTCGATGGGATTAT+TGG - tig0030904:7568-7587 Msa1445030:intron 45.0%
CTCGATGGGATTATTGGTGA+TGG - tig0030904:7574-7593 Msa1445030:intron 45.0%
!! GATGGGATTATTGGTGATGG+TGG - tig0030904:7577-7596 Msa1445030:intron 45.0%
AGCATGCTGCTCAAACTCAT+AGG + tig0030904:7734-7753 Msa1445030:intergenic 45.0%
TATGAGTTTGAGCAGCATGC+TGG - tig0030904:7733-7752 Msa1445030:intron 45.0%
! GCTGGTTCATCTATCAACGA+GGG - tig0030904:7877-7896 Msa1445030:intron 45.0%
TCCCACTATAACAAGGTCCA+AGG + tig0030904:8339-8358 Msa1445030:intergenic 45.0%
AAGAGAGGAGGAGAACAATC+TGG + tig0030904:8373-8392 Msa1445030:intergenic 45.0%
GTTCTCCTCCTCTCTTATCT+AGG - tig0030904:8377-8396 Msa1445030:intron 45.0%
ACAACCCTAGATAAGAGAGG+AGG + tig0030904:8385-8404 Msa1445030:intergenic 45.0%
AGCACAACCCTAGATAAGAG+AGG + tig0030904:8388-8407 Msa1445030:intergenic 45.0%
TTTCTATTCCTTCCCATCCG+TGG + tig0030904:8850-8869 Msa1445030:intergenic 45.0%
TTGTTTGCCGCAACTTGCAT+TGG - tig0030904:8897-8916 Msa1445030:intron 45.0%
GAGACTTTCTGCAGAATCCA+TGG + tig0030904:9029-9048 Msa1445030:intergenic 45.0%
TCTCCTACAAAGCAGCAAGA+AGG - tig0030904:9045-9064 Msa1445030:intron 45.0%
!! GAACCTTCTTGCTGCTTTGT+AGG + tig0030904:9051-9070 Msa1445030:intergenic 45.0%
GCATGCCTCATACATACAAC+AGG - tig0030904:9104-9123 Msa1445030:intron 45.0%
TGTACCACCCAAATCCAGTT+TGG - tig0030904:9172-9191 Msa1445030:intron 45.0%
ATGACTGCAGAGGCAAATGA+TGG + tig0030904:9808-9827 Msa1445030:intergenic 45.0%
!! GTTAGTGAGCTTTAGCTTGG+TGG - tig0030904:9895-9914 Msa1445030:intron 45.0%
!! TAGTGAGCTTTAGCTTGGTG+GGG - tig0030904:9897-9916 Msa1445030:intron 45.0%
TACAACAGGTTTGCAAGGTG+AGG + tig0030904:10045-10064 Msa1445030:intergenic 45.0%
CACCTTGCAAACCTGTTGTA+AGG - tig0030904:10045-10064 Msa1445030:intron 45.0%
ACCCTTACAACAGGTTTGCA+AGG + tig0030904:10050-10069 Msa1445030:intergenic 45.0%
CCTAACTCAACCCTTACAAC+AGG + tig0030904:10059-10078 Msa1445030:intergenic 45.0%
CCTGTTGTAAGGGTTGAGTT+AGG - tig0030904:10056-10075 Msa1445030:intron 45.0%
! GCCCAACCCAAATTCTAAGA+TGG - tig0030904:10078-10097 Msa1445030:CDS 45.0%
TAGTCTATCCAAGATCCGTC+GGG - tig0030904:10106-10125 Msa1445030:CDS 45.0%
CACTCCATATGTCCAATCCT+AGG - tig0030904:10152-10171 Msa1445030:CDS 45.0%
CAAAAGCGGCTTGTAAGGTA+AGG + tig0030904:10252-10271 Msa1445030:intergenic 45.0%
!!! CTTACAAGCCGCTTTTGTGA+GGG - tig0030904:10255-10274 Msa1445030:intron 45.0%
! GCTTTTGTGAGGGTTGAACT+TGG - tig0030904:10265-10284 Msa1445030:intron 45.0%
ACATTCCCCCATCCAAACAA+TGG - tig0030904:10425-10444 Msa1445030:intron 45.0%
!! TGGATGGGGGAATGTTTTGA+GGG + tig0030904:10493-10512 Msa1445030:intergenic 45.0%
! TTGGATGGGGGAATGTTTTG+AGG + tig0030904:10494-10513 Msa1445030:intergenic 45.0%
CTTAGAGTGTGTTTGGATGG+GGG + tig0030904:10506-10525 Msa1445030:intergenic 45.0%
!! TCCACAAGCCGGTTTTGTAA+GGG + tig0030904:10820-10839 Msa1445030:intergenic 45.0%
!! ATCCACAAGCCGGTTTTGTA+AGG + tig0030904:10821-10840 Msa1445030:intergenic 45.0%
! AAGAAGTGTGTTCTCCCTCT+TGG - tig0030904:11203-11222 Msa1445030:intron 45.0%
GAGTAGTAAGTGTAGGTGCT+TGG + tig0030904:11361-11380 Msa1445030:intergenic 45.0%
AGCACCTACACTTACTACTC+AGG - tig0030904:11361-11380 Msa1445030:intron 45.0%
GGCTTACTATGTCAAAGGAC+AGG - tig0030904:11622-11641 Msa1445030:intron 45.0%
ATGTGGCGGTAACTGCAAAA+AGG + tig0030904:12013-12032 Msa1445030:intergenic 45.0%
CGCCACATATATGCTTCCAA+TGG - tig0030904:12025-12044 Msa1445030:intron 45.0%
GACGATATGTGTGCAGTATG+TGG - tig0030904:12112-12131 Msa1445030:intron 45.0%
ATGTGTGCAGTATGTGGAGA+TGG - tig0030904:12118-12137 Msa1445030:intron 45.0%
GTCACTGTCTAATACTGCAC+TGG + tig0030904:12396-12415 Msa1445030:intergenic 45.0%
TACACTGTGTAAACCCAAGC+AGG + tig0030904:12523-12542 Msa1445030:intergenic 45.0%
TTACACAGTGTACCAGAGAG+TGG - tig0030904:12531-12550 Msa1445030:intron 45.0%
GTGCTAGGCCAATCATGATA+CGG - tig0030904:12598-12617 Msa1445030:intron 45.0%
CGTGTCAACCGTATCATGAT+TGG + tig0030904:12609-12628 Msa1445030:intergenic 45.0%
GAACCAGAATATGAAGTGGG+TGG - tig0030904:12639-12658 Msa1445030:intron 45.0%
CATCCACCCACTTCATATTC+TGG + tig0030904:12645-12664 Msa1445030:intergenic 45.0%
CATGATACTCCTTCTCACAC+TGG + tig0030904:13217-13236 Msa1445030:intergenic 45.0%
! GTATCATGTTGGTTGCTTGC+GGG - tig0030904:13229-13248 Msa1445030:intron 45.0%
TTTACTACAGGAGCTTCCCA+AGG - tig0030904:13353-13372 Msa1445030:intron 45.0%
TTCCGACAAGGAAGATGGTA+TGG + tig0030904:13454-13473 Msa1445030:intergenic 45.0%
! TAATCAGGAAGCATGAGGAC+AGG - tig0030904:13478-13497 Msa1445030:intron 45.0%
! AATCAGGAAGCATGAGGACA+GGG - tig0030904:13479-13498 Msa1445030:intron 45.0%
GACAGGGGATTATGTACGTA+TGG - tig0030904:13495-13514 Msa1445030:intron 45.0%
GGAACAGAGAATATCGTGCA+AGG + tig0030904:13717-13736 Msa1445030:intergenic 45.0%
TCTACATACCCTTTCACACC+GGG - tig0030904:13855-13874 Msa1445030:intron 45.0%
! ACCAACATTTTCCATGCTCC+AGG + tig0030904:13888-13907 Msa1445030:intergenic 45.0%
TGGAGCATGGAAAATGTTGG+TGG - tig0030904:13887-13906 Msa1445030:intron 45.0%
ACACCCCCTTACACAAAATG+AGG - tig0030904:14060-14079 Msa1445030:intron 45.0%
CACCCCCTTACACAAAATGA+GGG - tig0030904:14061-14080 Msa1445030:intron 45.0%
! ACGGCCCTCATTTTGTGTAA+GGG + tig0030904:14068-14087 Msa1445030:intergenic 45.0%
! AACGGCCCTCATTTTGTGTA+AGG + tig0030904:14069-14088 Msa1445030:intergenic 45.0%
TGGCAAAGCAGTGTTAACTG+TGG + tig0030904:14182-14201 Msa1445030:intergenic 45.0%
GGGGATTCTCTTGCTCATTT+AGG - tig0030904:14244-14263 Msa1445030:intron 45.0%
! TGCTCTGGTAATGTTTCGAC+AGG - tig0030904:14370-14389 Msa1445030:CDS 45.0%
GATCCCATCGTTGCAATATC+TGG - tig0030904:14401-14420 Msa1445030:CDS 45.0%
CGACCAGATATTGCAACGAT+GGG + tig0030904:14407-14426 Msa1445030:intergenic 45.0%
ACGACCAGATATTGCAACGA+TGG + tig0030904:14408-14427 Msa1445030:intergenic 45.0%
TCGTGACCTGATTCCTGTTA+TGG - tig0030904:14424-14443 Msa1445030:CDS 45.0%
! ACTGAAAGCACGAGGAAAGA+AGG + tig0030904:14513-14532 Msa1445030:intergenic 45.0%
AGGGGATGAGAGAGTAAAAG+AGG + tig0030904:14658-14677 Msa1445030:intergenic 45.0%
TGTCAGACAGCCTATCAACT+AGG + tig0030904:14712-14731 Msa1445030:intergenic 45.0%
CTGTGAACGATGGATAGAAG+TGG + tig0030904:14769-14788 Msa1445030:intergenic 45.0%
CACTTCTATCCATCGTTCAC+AGG - tig0030904:14767-14786 Msa1445030:CDS 45.0%
! GAGTCTTGGCAGAGTCTTTT+TGG - tig0030904:14830-14849 Msa1445030:CDS 45.0%
! ACTAGTGTCCTTATGGGCTA+TGG + tig0030904:14936-14955 Msa1445030:intergenic 45.0%
!! ATTTCTGGCCAAGAATTCGG+GGG - tig0030904:15103-15122 Msa1445030:CDS 45.0%
GCCAAAAATCCTAAGAAGCC+CGG + tig0030904:15256-15275 Msa1445030:intergenic 45.0%
TCTCTACTTGTAGCTACCAG+GGG + tig0030904:15297-15316 Msa1445030:intergenic 45.0%
CTCTCTACTTGTAGCTACCA+GGG + tig0030904:15298-15317 Msa1445030:intergenic 45.0%
!! GCTACAAGTAGAGAGCATCA+AGG - tig0030904:15303-15322 Msa1445030:CDS 45.0%
! GTGGCAGCCTTGTATAATGT+AGG - tig0030904:16029-16048 Msa1445030:intron 45.0%
!! GCATGGTTCTTGGCTCTTTT+TGG - tig0030904:16212-16231 Msa1445030:five_prime_UTR 45.0%
!! TAACAAAAAATAAAAAAAAT+TGG + tig0030904:6267-6286 Msa1445030:intergenic 5.0%
! CATTCTCAGATTCGGTCGGT+TGG + tig0030904:6890-6909 Msa1445030:intergenic 50.0%
TGTTAGCCATGCAGAGTGTG+GGG - tig0030904:6908-6927 Msa1445030:intron 50.0%
TGTGGGGAACTGACATCTAC+TGG - tig0030904:6924-6943 Msa1445030:CDS 50.0%
GATACCGTGAGTGATGAAGC+TGG - tig0030904:6969-6988 Msa1445030:CDS 50.0%
CGGGATTTCCATCACAACAC+GGG + tig0030904:7072-7091 Msa1445030:intergenic 50.0%
CGGTTGAACTAGCATGCTTC+GGG + tig0030904:7091-7110 Msa1445030:intergenic 50.0%
CCGGTTGAACTAGCATGCTT+CGG + tig0030904:7092-7111 Msa1445030:intergenic 50.0%
CCGAAGCATGCTAGTTCAAC+CGG - tig0030904:7089-7108 Msa1445030:intron 50.0%
CGGTATAGCCAGTAGGTGTT+TGG + tig0030904:7169-7188 Msa1445030:intergenic 50.0%
! ACACCTACTGGCTATACCGA+TGG - tig0030904:7170-7189 Msa1445030:intron 50.0%
ATAGTCACTGCCACTGCCAT+CGG + tig0030904:7189-7208 Msa1445030:intergenic 50.0%
TGCAGCTCCATCAAGGATAC+CGG + tig0030904:7441-7460 Msa1445030:intergenic 50.0%
!! GGTGATGGTGGATATCTGTG+TGG - tig0030904:7589-7608 Msa1445030:intron 50.0%
! GGCTGGTTCATCTATCAACG+AGG - tig0030904:7876-7895 Msa1445030:intron 50.0%
TATCAACGAGGGATCCTTCC+AGG - tig0030904:7888-7907 Msa1445030:intron 50.0%
GGATCCTTCCAGGTTTGGAA+AGG - tig0030904:7898-7917 Msa1445030:intron 50.0%
GTCACCTTTCCAAACCTGGA+AGG + tig0030904:7905-7924 Msa1445030:intergenic 50.0%
AGGAAGGATCAGACCCACTA+TGG + tig0030904:8319-8338 Msa1445030:intergenic 50.0%
! TAGTGGGTCTGATCCTTCCT+TGG - tig0030904:8319-8338 Msa1445030:intron 50.0%
ATTGCACAGCATCCACGGAT+GGG - tig0030904:8835-8854 Msa1445030:CDS 50.0%
! TGCAGCATGACTTGGCTCAT+CGG + tig0030904:9562-9581 Msa1445030:intergenic 50.0%
! GAGGCAAATGATGGAGGTGT+AGG + tig0030904:9799-9818 Msa1445030:intergenic 50.0%
ACTGCAGAGGCAAATGATGG+AGG + tig0030904:9805-9824 Msa1445030:intergenic 50.0%
!! AGTGAGCTTTAGCTTGGTGG+GGG - tig0030904:9898-9917 Msa1445030:intron 50.0%
TGACGTGAGCGGATAGAAGA+TGG + tig0030904:10132-10151 Msa1445030:intergenic 50.0%
CATATGGAGTGTGACGTGAG+CGG + tig0030904:10143-10162 Msa1445030:intergenic 50.0%
CACGCCTAGGATTGGACATA+TGG + tig0030904:10159-10178 Msa1445030:intergenic 50.0%
TATGTCCAATCCTAGGCGTG+AGG - tig0030904:10159-10178 Msa1445030:CDS 50.0%
ATGTCCAATCCTAGGCGTGA+GGG - tig0030904:10160-10179 Msa1445030:CDS 50.0%
CCTCACAAAAGCGGCTTGTA+AGG + tig0030904:10257-10276 Msa1445030:intergenic 50.0%
!!! CCTTACAAGCCGCTTTTGTG+AGG - tig0030904:10254-10273 Msa1445030:intron 50.0%
!! ACCCTTACAAAACCGGCTTG+TGG - tig0030904:10816-10835 Msa1445030:intron 50.0%
TGAACCAGACAGCTGATGAG+TGG - tig0030904:11168-11187 Msa1445030:intron 50.0%
GTTTCCACTCATCAGCTGTC+TGG + tig0030904:11175-11194 Msa1445030:intergenic 50.0%
GGGCAGTCTGCATATGTAGA+AGG - tig0030904:11269-11288 Msa1445030:intron 50.0%
GGTGCTTGGTCTGCAGAAAA+AGG + tig0030904:11347-11366 Msa1445030:intergenic 50.0%
CCATCAGCACTTCTCTTCTG+CGG + tig0030904:11391-11410 Msa1445030:intergenic 50.0%
TCAGGGACAACGATTTGCAC+AGG - tig0030904:11558-11577 Msa1445030:intron 50.0%
ATGCCTAATGGCCTACCAGA+TGG - tig0030904:11590-11609 Msa1445030:intron 50.0%
CATGGGCTTCAAACTGCGAA+GGG + tig0030904:11900-11919 Msa1445030:intergenic 50.0%
! GTTTGAAGCCCATGCTGGAA+TGG - tig0030904:11906-11925 Msa1445030:intron 50.0%
AACTACTCACGGTTGACGTC+TGG + tig0030904:11935-11954 Msa1445030:intergenic 50.0%
CGTCACTATCTCCCGTAGTA+AGG + tig0030904:12096-12115 Msa1445030:intergenic 50.0%
TGTGCAGTATGTGGAGATGG+AGG - tig0030904:12121-12140 Msa1445030:intron 50.0%
! TGTCCTAGGGCTTTTCATGC+AGG - tig0030904:12166-12185 Msa1445030:intron 50.0%
TCACCTGCATGAAAAGCCCT+AGG + tig0030904:12172-12191 Msa1445030:intergenic 50.0%
ACAGTGTACCAGAGAGTGGT+TGG - tig0030904:12535-12554 Msa1445030:intron 50.0%
AGACAATGCCAACCACTCTC+TGG + tig0030904:12546-12565 Msa1445030:intergenic 50.0%
CCTAGCACCTCTTTCATCAC+CGG + tig0030904:12586-12605 Msa1445030:intergenic 50.0%
TGGATGCGTTGTTTGCAGGT+AGG - tig0030904:12659-12678 Msa1445030:intron 50.0%
TTGGTTGCTTGCGGGACATT+GGG - tig0030904:13237-13256 Msa1445030:intron 50.0%
GGACATTGGGCTATGTGAGT+TGG - tig0030904:13250-13269 Msa1445030:intron 50.0%
AGGAGCTTCCCAAGGATAAG+TGG - tig0030904:13361-13380 Msa1445030:intron 50.0%
CTGCAGAACTCAGTTTCTGC+TGG - tig0030904:13420-13439 Msa1445030:intron 50.0%
! ATCAGGAAGCATGAGGACAG+GGG - tig0030904:13480-13499 Msa1445030:intron 50.0%
GCAGCAGCTCGTGAAAGTAA+CGG + tig0030904:13582-13601 Msa1445030:intergenic 50.0%
ACCCTTTCACACCGGGTTAT+AGG - tig0030904:13862-13881 Msa1445030:intron 50.0%
GCCTATAACCCGGTGTGAAA+GGG + tig0030904:13866-13885 Msa1445030:intergenic 50.0%
GCCTGGAGCATGGAAAATGT+TGG - tig0030904:13884-13903 Msa1445030:intron 50.0%
!! AAATGTTGGTGGCCCAACGA+TGG - tig0030904:13898-13917 Msa1445030:intron 50.0%
! GGCCCTCATTTTGTGTAAGG+GGG + tig0030904:14066-14085 Msa1445030:intergenic 50.0%
! CGGCCCTCATTTTGTGTAAG+GGG + tig0030904:14067-14086 Msa1445030:intergenic 50.0%
TGCCTTCATTGGGTGTAAGG+GGG + tig0030904:14148-14167 Msa1445030:intergenic 50.0%
CTGCCTTCATTGGGTGTAAG+GGG + tig0030904:14149-14168 Msa1445030:intergenic 50.0%
GCTGCCTTCATTGGGTGTAA+GGG + tig0030904:14150-14169 Msa1445030:intergenic 50.0%
GTCTTTGGGCTGCCTTCATT+GGG + tig0030904:14158-14177 Msa1445030:intergenic 50.0%
AGTCTTTGGGCTGCCTTCAT+TGG + tig0030904:14159-14178 Msa1445030:intergenic 50.0%
! ACTGGGAAACTGAAAGCACG+AGG + tig0030904:14521-14540 Msa1445030:intergenic 50.0%
TCGTGCTTTCAGTTTCCCAG+TGG - tig0030904:14520-14539 Msa1445030:intron 50.0%
GTGTAGTGCCATAGCCCATA+AGG - tig0030904:14925-14944 Msa1445030:CDS 50.0%
TAGTATCTGCCGGGCTTCTT+AGG - tig0030904:15244-15263 Msa1445030:CDS 50.0%
! GCCGGGCTTCTTAGGATTTT+TGG - tig0030904:15252-15271 Msa1445030:CDS 50.0%
GGGGAAGCTCAGCAATATTG+CGG + tig0030904:15278-15297 Msa1445030:intergenic 50.0%
CAATATTGCTGAGCTTCCCC+TGG - tig0030904:15278-15297 Msa1445030:CDS 50.0%
GCTCTCTACTTGTAGCTACC+AGG + tig0030904:15299-15318 Msa1445030:intergenic 50.0%
CGCTGTTCTCTTGCATAGAG+AGG - tig0030904:15488-15507 Msa1445030:CDS 50.0%
! AGTGCTGGAAAAGATGGTGC+AGG - tig0030904:15854-15873 Msa1445030:intron 50.0%
ATGGGGAACGTGGCCTAAAA+TGG - tig0030904:16073-16092 Msa1445030:five_prime_UTR 50.0%
! GTGCGGGAATGAAGTGTTCG+TGG + tig0030904:6045-6064 None:intergenic 55.0%
TCAGTTCCCCACACTCTGCA+TGG + tig0030904:6917-6936 Msa1445030:intergenic 55.0%
TGCAGTGTCCCGTGTTGTGA+TGG - tig0030904:7061-7080 Msa1445030:intron 55.0%
CTGCCATCGGTATAGCCAGT+AGG + tig0030904:7176-7195 Msa1445030:intergenic 55.0%
ACTGGCTATACCGATGGCAG+TGG - tig0030904:7176-7195 Msa1445030:intron 55.0%
GATGGCAGTGGCAGTGACTA+TGG - tig0030904:7188-7207 Msa1445030:intron 55.0%
!! GGGTTGGTAGAGAGCTCGTA+TGG - tig0030904:7299-7318 Msa1445030:intron 55.0%
TGGTAGAGAGCTCGTATGGC+AGG - tig0030904:7303-7322 Msa1445030:intron 55.0%
GGTAGAGAGCTCGTATGGCA+GGG - tig0030904:7304-7323 Msa1445030:intron 55.0%
GTAGAGAGCTCGTATGGCAG+GGG - tig0030904:7305-7324 Msa1445030:intron 55.0%
!! CTCATCTGGCGTGCTGTTTG+TGG + tig0030904:7842-7861 Msa1445030:intergenic 55.0%
CACAAACAGCACGCCAGATG+AGG - tig0030904:7840-7859 Msa1445030:intron 55.0%
ACGAGGGATCCTTCCAGGTT+TGG - tig0030904:7893-7912 Msa1445030:intron 55.0%
CATTGCACAGCATCCACGGA+TGG - tig0030904:8834-8853 Msa1445030:CDS 55.0%
GGGTCCAAACTGGATTTGGG+TGG + tig0030904:9179-9198 Msa1445030:intergenic 55.0%
TGCACTGTGCACCATAGCCA+GGG + tig0030904:9594-9613 Msa1445030:intergenic 55.0%
TGTCCAATCCTAGGCGTGAG+GGG - tig0030904:10161-10180 Msa1445030:CDS 55.0%
TCGCACACGCGAAGATGAGA+AGG + tig0030904:11123-11142 Msa1445030:intergenic 55.0%
!! CCGCAGAAGAGAAGTGCTGA+TGG - tig0030904:11388-11407 Msa1445030:intron 55.0%
GCACCATCTGGTAGGCCATT+AGG + tig0030904:11596-11615 Msa1445030:intergenic 55.0%
TAAGCCAACTCGGCACCATC+TGG + tig0030904:11608-11627 Msa1445030:intergenic 55.0%
GCATGGGCTTCAAACTGCGA+AGG + tig0030904:11901-11920 Msa1445030:intergenic 55.0%
! TCGCAGTTTGAAGCCCATGC+TGG - tig0030904:11901-11920 Msa1445030:intron 55.0%
TGAAGCCCATGCTGGAATGG+CGG - tig0030904:11909-11928 Msa1445030:intron 55.0%
!! CCGGTGATGAAAGAGGTGCT+AGG - tig0030904:12583-12602 Msa1445030:intron 55.0%
TGGGTGGATGCGTTGTTTGC+AGG - tig0030904:12655-12674 Msa1445030:intron 55.0%
GTTGGTTGCTTGCGGGACAT+TGG - tig0030904:13236-13255 Msa1445030:intron 55.0%
GGCCTATAACCCGGTGTGAA+AGG + tig0030904:13867-13886 Msa1445030:intergenic 55.0%
TTCACACCGGGTTATAGGCC+TGG - tig0030904:13867-13886 Msa1445030:intron 55.0%
CATGCTCCAGGCCTATAACC+CGG + tig0030904:13876-13895 Msa1445030:intergenic 55.0%
CACCCCCTTACACCCAATGA+AGG - tig0030904:14143-14162 Msa1445030:intron 55.0%
GGCTGCCTTCATTGGGTGTA+AGG + tig0030904:14151-14170 Msa1445030:intergenic 55.0%
CAGGGGATGCAGAGTCCATT+TGG - tig0030904:15554-15573 Msa1445030:CDS 55.0%
CACAGCATCCACGGATGGGA+AGG - tig0030904:8839-8858 Msa1445030:CDS 60.0%
GTGCACTGTGCACCATAGCC+AGG + tig0030904:9595-9614 Msa1445030:intergenic 60.0%
GAAGATGGCCCGACGGATCT+TGG + tig0030904:10117-10136 Msa1445030:intergenic 60.0%
GCGGATAGAAGATGGCCCGA+CGG + tig0030904:10124-10143 Msa1445030:intergenic 60.0%
AAGCCCCTCACGCCTAGGAT+TGG + tig0030904:10167-10186 Msa1445030:intergenic 60.0%
AACACAAGCCCCTCACGCCT+AGG + tig0030904:10172-10191 Msa1445030:intergenic 60.0%
CCAACTCGGCACCATCTGGT+AGG + tig0030904:11604-11623 Msa1445030:intergenic 60.0%
! CCTACCAGATGGTGCCGAGT+TGG - tig0030904:11601-11620 Msa1445030:intron 60.0%
TCTGGCCGCCATTCCAGCAT+GGG + tig0030904:11917-11936 Msa1445030:intergenic 60.0%
CGGGTTATAGGCCTGGAGCA+TGG - tig0030904:13874-13893 Msa1445030:intron 60.0%
ACTCTGCATCCCCTGCAGCA+GGG + tig0030904:15549-15568 Msa1445030:intergenic 60.0%
GTCTGGCCGCCATTCCAGCA+TGG + tig0030904:11918-11937 Msa1445030:intergenic 65.0%
AAGCTGGTGCTCCCTGCTGC+AGG - tig0030904:15535-15554 Msa1445030:CDS 65.0%
AGCTGGTGCTCCCTGCTGCA+GGG - tig0030904:15536-15555 Msa1445030:CDS 65.0%
GACTCTGCATCCCCTGCAGC+AGG + tig0030904:15550-15569 Msa1445030:intergenic 65.0%
GCTGGTGCTCCCTGCTGCAG+GGG - tig0030904:15537-15556 Msa1445030:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0030904 gene 5927 16320 5927 ID=Msa1445030;Name=Msa1445030
tig0030904 mRNA 5927 16320 5927 ID=Msa1445030-mRNA-1;Parent=Msa1445030;Name=Msa1445030-mRNA-1;_AED=0.06;_eAED=0.06;_QI=427|1|1|1|0.94|0.9|20|433|896
tig0030904 exon 5927 6443 5927 ID=Msa1445030-mRNA-1:exon:14793;Parent=Msa1445030-mRNA-1
tig0030904 exon 6632 6772 6632 ID=Msa1445030-mRNA-1:exon:14792;Parent=Msa1445030-mRNA-1
tig0030904 exon 6918 7011 6918 ID=Msa1445030-mRNA-1:exon:14791;Parent=Msa1445030-mRNA-1
tig0030904 exon 7095 7151 7095 ID=Msa1445030-mRNA-1:exon:14790;Parent=Msa1445030-mRNA-1
tig0030904 exon 7794 7855 7794 ID=Msa1445030-mRNA-1:exon:14789;Parent=Msa1445030-mRNA-1
tig0030904 exon 8636 8884 8636 ID=Msa1445030-mRNA-1:exon:14788;Parent=Msa1445030-mRNA-1
tig0030904 exon 8973 9029 8973 ID=Msa1445030-mRNA-1:exon:14787;Parent=Msa1445030-mRNA-1
tig0030904 exon 9114 9171 9114 ID=Msa1445030-mRNA-1:exon:14786;Parent=Msa1445030-mRNA-1
tig0030904 exon 9571 9727 9571 ID=Msa1445030-mRNA-1:exon:14785;Parent=Msa1445030-mRNA-1
tig0030904 exon 10060 10226 10060 ID=Msa1445030-mRNA-1:exon:14784;Parent=Msa1445030-mRNA-1
tig0030904 exon 10303 10355 10303 ID=Msa1445030-mRNA-1:exon:14783;Parent=Msa1445030-mRNA-1
tig0030904 exon 10448 10507 10448 ID=Msa1445030-mRNA-1:exon:14782;Parent=Msa1445030-mRNA-1
tig0030904 exon 10604 10685 10604 ID=Msa1445030-mRNA-1:exon:14781;Parent=Msa1445030-mRNA-1
tig0030904 exon 10822 10890 10822 ID=Msa1445030-mRNA-1:exon:14780;Parent=Msa1445030-mRNA-1
tig0030904 exon 11040 11150 11040 ID=Msa1445030-mRNA-1:exon:14779;Parent=Msa1445030-mRNA-1
tig0030904 exon 13122 13206 13122 ID=Msa1445030-mRNA-1:exon:14778;Parent=Msa1445030-mRNA-1
tig0030904 exon 14328 14526 14328 ID=Msa1445030-mRNA-1:exon:14777;Parent=Msa1445030-mRNA-1
tig0030904 exon 14611 14679 14611 ID=Msa1445030-mRNA-1:exon:14776;Parent=Msa1445030-mRNA-1
tig0030904 exon 14760 15744 14760 ID=Msa1445030-mRNA-1:exon:14775;Parent=Msa1445030-mRNA-1
tig0030904 exon 16042 16320 16042 ID=Msa1445030-mRNA-1:exon:14774;Parent=Msa1445030-mRNA-1
tig0030904 five_prime_UTR 16042 16320 16042 ID=Msa1445030-mRNA-1:five_prime_utr;Parent=Msa1445030-mRNA-1
tig0030904 five_prime_UTR 15597 15744 15597 ID=Msa1445030-mRNA-1:five_prime_utr;Parent=Msa1445030-mRNA-1
tig0030904 CDS 14760 15596 14760 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 14611 14679 14611 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 14328 14526 14328 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 13122 13206 13122 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 11040 11150 11040 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 10822 10890 10822 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 10604 10685 10604 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 10448 10507 10448 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 10303 10355 10303 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 10060 10226 10060 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 9571 9727 9571 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 9114 9171 9114 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 8973 9029 8973 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 8636 8884 8636 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 7794 7855 7794 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 7095 7151 7095 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 6918 7011 6918 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 6632 6772 6632 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 CDS 6360 6443 6360 ID=Msa1445030-mRNA-1:cds;Parent=Msa1445030-mRNA-1
tig0030904 three_prime_UTR 5927 6359 5927 ID=Msa1445030-mRNA-1:three_prime_utr;Parent=Msa1445030-mRNA-1
Gene Sequence

>Msa1445030

ATGGGAGAAGAAGCAGTTTGTGTGCAAGAATTGGTTGATGGAAAGACGGAAAATACCGAGGAATCAAGGTTGGAATTGAAACGTGATTATAACCAATGTGTTGCTGATACTGAAACAAATGTTCCGCCTAATAAAAAACAAGCTAAAGAAGTATCAAATGATGAATTGCGTTCGGAAGTTACAAATCCAAATGTTTCTGCAACAGAACATGCACAAACCTTTCATGATATTAGCAGCCAACCGACCGAATCTGAGAATGTTAGCCATGCAGAGTGTGGGGAACTGACATCTACTGGTTTGGAGAATTCCAGTTCTCATGATACCGTGAGTGATGAAGCTGGTGTTCGGAATAATGATAATGATAATATTAATAATTTGTGTCAGAATGATAAAGGTACGAGTAGTAACGATGCAGTGTCCCGTGTTGTGATGGAAATCCCGAAGCATGCTAGTTCAACCGGTATTCGAAAGATTACTTTTAAGTTCAGTAAAAAGAAGGAGGATTATGATGATTACCAAACACCTACTGGCTATACCGATGGCAGTGGCAGTGACTATGGATATAGCTATGGGAATGGCAGTGGATATGGCTATGGATATGGTTATCACGGGGATGATGAATATTTGGCAAATGATGATTATAATAGTGGGTTGGTAGAGAGCTCGTATGGCAGGGGATATGTTCCTTATGAAGATTCGGAGTTGTATTCTGGCAATATGGAATTGAAAATGTCAAAGAAAGTAGTTCCAAACGCCTTCCCCAATAATGTGAAAAAACTATTATCAACCGGTATCCTTGATGGAGCTGCAGTGAAATATATTTATAACCCTGGAAAGGTTGAGCTCGATGGGATTATTGGTGATGGTGGATATCTGTGTGGCTGTTCAATGTGCAGTTACTCTAGAGTGCTCAGTGCCTATGAGTTTGAGCAGCATGCTGGTGCTAAGACTAGACATCCAAATAATCACATATTCCTAGAAAATGGAAAACCAATTTATAGCATTATACATGAAATAAAAACTGCCACAAACAGCACGCCAGATGAGGTTATAAAGAATGTGGCTGGTTCATCTATCAACGAGGGATCCTTCCAGGTTTGGAAAGAAAGTCTCCTACAAAGCAGCAAGAAGGTTCCAACTCAAAAAAAATACAGCACAAAGTATACTGGCATGCCTCATACATACAACAGTCAATCTATAGAAAGTGCGAGCTCCTTCTCATCTTCGCGTGTGCGAAATCATTTTGAGCAGCAAATGTATGTGAACCAGACAGCTGATGAGTGGAAACGAGTCGTAAAGAAACCAAGCACCTACACTTACTACTCAGGTATACCGCAGAAGAGAAGTGCTGATGGTTGCACTAAGAAAAGGGACAACGATTTGCACAGGTTACTTTTTATGCCTAATGGCCTACCAGATGGTGCCGAGTTGGCTTACTATGTCAAAGGACAGAAATTACTTGGAGGTTACAAACAAGGAAATGGTATAGTCTGTGGTTGTTGTGATATAGAGATAAGCCCTTCGCAGTTTGAAGCCCATGCTGGAATGGCGGCCAGACGTCAACCTTACCGCCACATATATGCTTCCAATGGATTGACACTTCATGATATAGCTCTCTCTTTAGCAAATGGTCAAAACCTTACTACGGGAGATAGTGACGATATGTGTGCAGTATGTGGAGATGGAGGAGATTTGATTCTTTGCAATGGATGTCCTAGGGCTTTTCATGCAGCCTGCTTGGGTTTACACAGTGTACCAGAGAGTGGTTGGCATTGTCTAAATTGTGAAGATAATACCGGTGATGAAAGAGGTGCTAGGCCAATCATGATACGGTTGACACGGGTTGATAAAGAACCAGAATATGAAGTGGGTGGATGCGTTGTTTGCAGGGCAAATGATTTCAGTGTTGATAAATTTGATGACCGAACAGTAATAATTTGTGATCAGTGTGAGAAGGAGTATCATGTTGGTTGCTTGCGGGACATTGGGCTATGTGAGTTGGAAGAGCTTCCCAAGGATAAGTGGTTTTGTTGTGACGACTGCAATCGAATATATGTGGCTCTGCAGAACTCAGTTTCTGCTGGAGCAGATACCATACCATCTTCCTTGTCGGAACTAATAATCAGGAAGCATGAGGACAGGGGATTATGTACGTATGGAGACATGAATGATATCCAATGGAGAATTTTAAGTGGCAAAAGTCGTTATGCAGAGCATTTACCGTTACTTTCACGAGCTGCTGCAATTTTTCGAGAGTGCTTTGATCCCATCGTTGCAATATCTGGTCGTGACCTGATTCCTGTTATGGTATATGGGCGAAATATTTCTGGCCAAGAATTCGGGGGAATGTATTGCATCGTTTTAATTGTGAATTCTATTGTAGTATCTGCCGGGCTTCTTAGGATTTTTGGCCGCAATATTGCTGAGCTTCCCCTGGTAGCTACAAGTAGAGAGCATCAAGGAAAAGGTTATTTTCAAGCGCTGTTCTCTTGCATAGAGAGGTTGCTGTCTTCTCTAAATGTAGAAAAGCTGGTGCTCCCTGCTGCAGGGGATGCAGAGTCCATTTGGACTAAGAAATTAGGCTTTCACAAGATGAGTGAAGATCAGTTAACCAAACATCTTAAAGAGGTGCAGCTCACCCTCTTCAACAAAACATCAGTGCTGGAAAAGATGGTGCAGGCGACAGAATGA
Protein sequence

>Msa1445030

MGEEAVCVQELVDGKTENTEESRLELKRDYNQCVADTETNVPPNKKQAKEVSNDELRSEVTNPNVSATEHAQTFHDISSQPTESENVSHAECGELTSTGLENSSSHDTVSDEAGVRNNDNDNINNLCQNDKGTSSNDAVSRVVMEIPKHASSTGIRKITFKFSKKKEDYDDYQTPTGYTDGSGSDYGYSYGNGSGYGYGYGYHGDDEYLANDDYNSGLVESSYGRGYVPYEDSELYSGNMELKMSKKVVPNAFPNNVKKLLSTGILDGAAVKYIYNPGKVELDGIIGDGGYLCGCSMCSYSRVLSAYEFEQHAGAKTRHPNNHIFLENGKPIYSIIHEIKTATNSTPDEVIKNVAGSSINEGSFQVWKESLLQSSKKVPTQKKYSTKYTGMPHTYNSQSIESASSFSSSRVRNHFEQQMYVNQTADEWKRVVKKPSTYTYYSGIPQKRSADGCTKKRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYASNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHAACLGLHSVPESGWHCLNCEDNTGDERGARPIMIRLTRVDKEPEYEVGGCVVCRANDFSVDKFDDRTVIICDQCEKEYHVGCLRDIGLCELEELPKDKWFCCDDCNRIYVALQNSVSAGADTIPSSLSELIIRKHEDRGLCTYGDMNDIQWRILSGKSRYAEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSIVVSAGLLRIFGRNIAELPLVATSREHQGKGYFQALFSCIERLLSSLNVEKLVLPAAGDAESIWTKKLGFHKMSEDQLTKHLKEVQLTLFNKTSVLEKMVQATE*