Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317580 | XP_013444743.1 | 97.458 | 1023 | 26 | 0 | 1 | 1023 | 1 | 1023 | 0.0 | 2069 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317580 | A0A072TPJ6 | 97.458 | 1023 | 26 | 0 | 1 | 1023 | 1 | 1023 | 0.0 | 2069 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003050 | Msa1317580 | 0.823902 | 1.078354e-53 | -8.615850e-47 |
| Msa0027390 | Msa1317580 | 0.823194 | 1.579647e-53 | -8.615850e-47 |
| Msa0032320 | Msa1317580 | 0.821811 | 3.310985e-53 | -8.615850e-47 |
| Msa0077450 | Msa1317580 | 0.816189 | 6.288077e-52 | -8.615850e-47 |
| Msa0078610 | Msa1317580 | 0.802477 | 5.507624e-49 | -8.615850e-47 |
| Msa0608200 | Msa1317580 | 0.844136 | 9.113265e-59 | -8.615850e-47 |
| Msa0626280 | Msa1317580 | 0.801201 | 1.006821e-48 | -8.615850e-47 |
| Msa0648520 | Msa1317580 | 0.817647 | 2.958653e-52 | -8.615850e-47 |
| Msa0658570 | Msa1317580 | 0.804555 | 2.042211e-49 | -8.615850e-47 |
| Msa0687450 | Msa1317580 | 0.807779 | 4.278091e-50 | -8.615850e-47 |
| Msa0689760 | Msa1317580 | 0.805212 | 1.488370e-49 | -8.615850e-47 |
| Msa0691050 | Msa1317580 | 0.858554 | 7.606460e-63 | -8.615850e-47 |
| Msa0702570 | Msa1317580 | 0.801487 | 8.798531e-49 | -8.615850e-47 |
| Msa0735160 | Msa1317580 | 0.804396 | 2.204594e-49 | -8.615850e-47 |
| Msa0738940 | Msa1317580 | 0.819250 | 1.282064e-52 | -8.615850e-47 |
| Msa0757800 | Msa1317580 | 0.803585 | 3.249470e-49 | -8.615850e-47 |
| Msa0780280 | Msa1317580 | 0.803862 | 2.846399e-49 | -8.615850e-47 |
| Msa0794950 | Msa1317580 | 0.801871 | 7.338405e-49 | -8.615850e-47 |
| Msa0817110 | Msa1317580 | 0.805097 | 1.573580e-49 | -8.615850e-47 |
| Msa0144790 | Msa1317580 | 0.852974 | 3.246510e-61 | -8.615850e-47 |
| Msa0165300 | Msa1317580 | 0.826419 | 2.741011e-54 | -8.615850e-47 |
| Msa0170140 | Msa1317580 | 0.806722 | 7.163753e-50 | -8.615850e-47 |
| Msa0191890 | Msa1317580 | 0.803769 | 2.976135e-49 | -8.615850e-47 |
| Msa0227230 | Msa1317580 | 0.809280 | 2.045318e-50 | -8.615850e-47 |
| Msa0230370 | Msa1317580 | 0.812779 | 3.569710e-51 | -8.615850e-47 |
| Msa0238230 | Msa1317580 | 0.808435 | 3.101702e-50 | -8.615850e-47 |
| Msa1224830 | Msa1317580 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa1227330 | Msa1317580 | 0.847506 | 1.107559e-59 | -8.615850e-47 |
| Msa1229600 | Msa1317580 | 0.803340 | 3.653562e-49 | -8.615850e-47 |
| Msa1288450 | Msa1317580 | 0.817816 | 2.710294e-52 | -8.615850e-47 |
| Msa1299330 | Msa1317580 | 0.810579 | 1.074627e-50 | -8.615850e-47 |
| Msa1310210 | Msa1317580 | 0.819103 | 1.384517e-52 | -8.615850e-47 |
| Msa1317580 | Msa1329670 | 0.812468 | 4.175910e-51 | -8.615850e-47 |
| Msa1317580 | Msa1338130 | 0.892070 | 2.227889e-74 | -8.615850e-47 |
| Msa1317580 | Msa1379850 | 0.847218 | 1.329102e-59 | -8.615850e-47 |
| Msa1317580 | Msa1393410 | 0.814042 | 1.883927e-51 | -8.615850e-47 |
| Msa1317580 | Msa1396780 | 0.834763 | 2.483250e-56 | -8.615850e-47 |
| Msa1317580 | Msa1400070 | 0.806658 | 7.391041e-50 | -8.615850e-47 |
| Msa1317580 | Msa1401270 | 0.804030 | 2.627118e-49 | -8.615850e-47 |
| Msa1317580 | Msa1420250 | 0.806089 | 9.743313e-50 | -8.615850e-47 |
| Msa1317580 | Msa1433220 | 0.831151 | 1.963917e-55 | -8.615850e-47 |
| Msa1317580 | Msa1435400 | 0.844055 | 9.578515e-59 | -8.615850e-47 |
| Msa1317580 | Msa1435420 | 0.813601 | 2.357235e-51 | -8.615850e-47 |
| Msa1317580 | Msa1440740 | 0.803167 | 3.966768e-49 | -8.615850e-47 |
| Msa1317580 | Msa1440940 | 0.808949 | 2.408334e-50 | -8.615850e-47 |
| Msa1317580 | Msa1445220 | 0.809825 | 1.562816e-50 | -8.615850e-47 |
| Msa1317580 | Msa1447150 | 0.804298 | 2.310209e-49 | -8.615850e-47 |
| Msa0422500 | Msa1317580 | 0.835574 | 1.550132e-56 | -8.615850e-47 |
| Msa0436370 | Msa1317580 | 0.845955 | 2.940968e-59 | -8.615850e-47 |
| Msa0445280 | Msa1317580 | 0.803381 | 3.581527e-49 | -8.615850e-47 |
| Msa0450350 | Msa1317580 | 0.841621 | 4.252974e-58 | -8.615850e-47 |
| Msa0480800 | Msa1317580 | 0.958478 | 2.133000e-116 | -8.615850e-47 |
| Msa0982240 | Msa1317580 | 0.806972 | 6.344951e-50 | -8.615850e-47 |
| Msa1010070 | Msa1317580 | 0.816230 | 6.156420e-52 | -8.615850e-47 |
| Msa1021510 | Msa1317580 | 0.834214 | 3.411493e-56 | -8.615850e-47 |
| Msa1070690 | Msa1317580 | 0.805926 | 1.054436e-49 | -8.615850e-47 |
| Msa1084260 | Msa1317580 | 0.811703 | 6.131148e-51 | -8.615850e-47 |
| Msa1105500 | Msa1317580 | 0.821119 | 4.782045e-53 | -8.615850e-47 |
| Msa0255550 | Msa1317580 | 0.831624 | 1.501752e-55 | -8.615850e-47 |
| Msa0274670 | Msa1317580 | 0.807104 | 5.948994e-50 | -8.615850e-47 |
| Msa0294590 | Msa1317580 | 0.838907 | 2.176007e-57 | -8.615850e-47 |
| Msa0312530 | Msa1317580 | 0.803409 | 3.534385e-49 | -8.615850e-47 |
| Msa1118760 | Msa1317580 | 0.805410 | 1.352963e-49 | -8.615850e-47 |
| Msa1133220 | Msa1317580 | 0.803712 | 3.057866e-49 | -8.615850e-47 |
| Msa1152950 | Msa1317580 | 0.821405 | 4.108495e-53 | -8.615850e-47 |
| Msa1158660 | Msa1317580 | 0.822490 | 2.304277e-53 | -8.615850e-47 |
| Msa1179970 | Msa1317580 | 0.808143 | 3.579376e-50 | -8.615850e-47 |
| Msa1188720 | Msa1317580 | 0.827851 | 1.244947e-54 | -8.615850e-47 |
| Msa0492880 | Msa1317580 | 0.813509 | 2.468866e-51 | -8.615850e-47 |
| Msa0511250 | Msa1317580 | 0.828953 | 6.748537e-55 | -8.615850e-47 |
| Msa0516370 | Msa1317580 | 0.803685 | 3.097647e-49 | -8.615850e-47 |
| Msa0570640 | Msa1317580 | 0.820326 | 7.278248e-53 | -8.615850e-47 |
| Msa0572420 | Msa1317580 | 0.817063 | 4.005353e-52 | -8.615850e-47 |
| Msa0572480 | Msa1317580 | 0.832127 | 1.128619e-55 | -8.615850e-47 |
| Msa0573040 | Msa1317580 | 0.830253 | 3.259085e-55 | -8.615850e-47 |
| Msa0870530 | Msa1317580 | 0.803297 | 3.728527e-49 | -8.615850e-47 |
| Msa0900620 | Msa1317580 | 0.809056 | 2.284543e-50 | -8.615850e-47 |
| Msa0929950 | Msa1317580 | 0.804772 | 1.840299e-49 | -8.615850e-47 |
| Msa0961300 | Msa1317580 | 0.820316 | 7.314364e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317580 | MtrunA17_Chr8g0348021 | 97.458 | 1023 | 26 | 0 | 1 | 1023 | 1 | 1023 | 0.0 | 2069 |
| Msa1317580 | MtrunA17_Chr1g0197621 | 40.989 | 971 | 539 | 14 | 54 | 1003 | 80 | 1037 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317580 | AT4G01210.1 | 58.293 | 1043 | 400 | 11 | 1 | 1023 | 1 | 1028 | 0.0 | 1222 |
| Msa1317580 | AT5G04480.1 | 42.588 | 904 | 488 | 13 | 121 | 1003 | 156 | 1049 | 0.0 | 724 |
| Msa1317580 | AT5G04480.2 | 42.035 | 904 | 478 | 14 | 121 | 1003 | 156 | 1034 | 0.0 | 702 |
Find 251 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCAACCTCCTGCATTAA+TGG | 0.111874 | 8_4:+19004532 | None:intergenic |
| CTGGAATTATCTTTGCTTAA+AGG | 0.130726 | 8_4:+19007352 | None:intergenic |
| ATTAGAAGCAGATGCATTTA+TGG | 0.137762 | 8_4:-19007524 | Msa1317580:CDS |
| TGTGCAATATATTCCATATT+TGG | 0.157335 | 8_4:-19002857 | Msa1317580:three_prime_UTR |
| CAAATTCGACGTATCAAAAT+AGG | 0.189886 | 8_4:-19006118 | Msa1317580:CDS |
| ACGGGGATACATTATATTTC+TGG | 0.193517 | 8_4:-19004616 | Msa1317580:CDS |
| GATCTAAACCTCTGTGAAAA+TGG | 0.201595 | 8_4:+19010816 | None:intergenic |
| CGAGATGTACTAGGTGAATT+TGG | 0.213222 | 8_4:-19004909 | Msa1317580:CDS |
| TCCTGCATTACACCGGTTTC+CGG | 0.219473 | 8_4:+19003485 | None:intergenic |
| TGATGGGACTGTAATGTAAA+TGG | 0.222366 | 8_4:-19010901 | Msa1317580:exon |
| GAGGATTTCGGAGAAGTTTA+AGG | 0.232833 | 8_4:-19010562 | Msa1317580:CDS |
| TGGCCACAACCAGTGTTTAT+TGG | 0.251752 | 8_4:+19003352 | None:intergenic |
| GCAGGCTTTGTCACCACTTT+TGG | 0.264501 | 8_4:-19007383 | Msa1317580:CDS |
| GAAATATCAGGAGCAATAAT+TGG | 0.267581 | 8_4:+19007024 | None:intergenic |
| CCCAGATGAGAAAACTTTAA+TGG | 0.270948 | 8_4:+19011014 | None:intergenic |
| ATACCAAGAAAAGGCATTTC+TGG | 0.280408 | 8_4:+19008004 | None:intergenic |
| ATGGCAGATGTTGTGATATA+TGG | 0.295079 | 8_4:-19007108 | Msa1317580:CDS |
| GAGCTGTGAAGATGCGTTCT+TGG | 0.295118 | 8_4:-19010653 | Msa1317580:CDS |
| AGCTCCCTCTAATCCAAATA+TGG | 0.299700 | 8_4:+19002844 | None:intergenic |
| AGAGATTGGCTACGATATTC+AGG | 0.302902 | 8_4:-19008948 | Msa1317580:intron |
| ATGAGAGGGAGAGAAGTTTA+AGG | 0.304691 | 8_4:-19003298 | Msa1317580:CDS |
| TCAAATGTTTCTTCCTGTTT+CGG | 0.308966 | 8_4:-19010703 | Msa1317580:CDS |
| GGCCACAACCAGTGTTTATT+GGG | 0.317679 | 8_4:+19003353 | None:intergenic |
| ATTACCGGCAAGACATAGTT+TGG | 0.319997 | 8_4:+19007718 | None:intergenic |
| TGTGAAGCCTCCACCAGATT+TGG | 0.322661 | 8_4:-19003186 | Msa1317580:CDS |
| AACCGAACCGGGAAGCGATT+TGG | 0.322908 | 8_4:-19010525 | Msa1317580:CDS |
| CCAGATGAGAAAACTTTAAT+GGG | 0.323529 | 8_4:+19011015 | None:intergenic |
| TTAGAGCTTTCTTCCAAATC+TGG | 0.324471 | 8_4:+19003173 | None:intergenic |
| ATATGCTCTATGGTCCCTTT+TGG | 0.336577 | 8_4:+19007165 | None:intergenic |
| TTAAGTTTCTCCACATATTA+CGG | 0.338698 | 8_4:+19008603 | None:intergenic |
| TCCCAAAAGAATAAAATTAC+AGG | 0.341637 | 8_4:+19002959 | None:intergenic |
| CTTTCCAAACTATGTCTTGC+CGG | 0.342132 | 8_4:-19007722 | Msa1317580:intron |
| TTCAATCTGTTGAACCGAAC+CGG | 0.349878 | 8_4:-19010537 | Msa1317580:CDS |
| AACCAAATCGCTTCCCGGTT+CGG | 0.350066 | 8_4:+19010523 | None:intergenic |
| AGTTCATGGTTTAAATTTGA+TGG | 0.351649 | 8_4:-19010918 | Msa1317580:five_prime_UTR |
| TTGTACAAGGGCATGTGGTT+GGG | 0.351751 | 8_4:-19007421 | Msa1317580:CDS |
| TTGCCTCCCATGCCCGTAGA+TGG | 0.352250 | 8_4:-19004353 | Msa1317580:CDS |
| ATGGCTTTAATCAAAATCTC+TGG | 0.352504 | 8_4:+19007060 | None:intergenic |
| ATCGCGATAATGACATCTTC+TGG | 0.354481 | 8_4:+19007460 | None:intergenic |
| GCCACATCTTTGTTAGAGAT+TGG | 0.356107 | 8_4:-19008962 | Msa1317580:CDS |
| ATTCATTTGTATATACCATA+TGG | 0.356668 | 8_4:-19006004 | Msa1317580:CDS |
| CCTGCATTACACCGGTTTCC+GGG | 0.357619 | 8_4:+19003486 | None:intergenic |
| ATATTCCATATTTGGATTAG+AGG | 0.365479 | 8_4:-19002849 | None:intergenic |
| AGAACTCTAATGTTATCCTT+AGG | 0.366948 | 8_4:+19006380 | None:intergenic |
| AATGGAAAGAAACGAAGATT+TGG | 0.367327 | 8_4:+19011204 | None:intergenic |
| CTTGGATTGGATTTCAGTCT+TGG | 0.367794 | 8_4:-19004839 | Msa1317580:CDS |
| GCATTTATGAACCGTACGTT+GGG | 0.369771 | 8_4:-19005238 | Msa1317580:CDS |
| TCTATAACCAAATCGCTTCC+CGG | 0.371968 | 8_4:+19010518 | None:intergenic |
| ACCCTTCACAGAAAGACTTT+TGG | 0.372816 | 8_4:-19004568 | Msa1317580:CDS |
| TCAAGTCCATACCTCTTGTA+TGG | 0.377143 | 8_4:-19007855 | Msa1317580:CDS |
| ATGGTTAGGTTCTTTATTCT+AGG | 0.381140 | 8_4:-19002937 | Msa1317580:three_prime_UTR |
| GAATCTTCGACAACCGAAAC+AGG | 0.384577 | 8_4:+19010690 | None:intergenic |
| TGTACAAGGGCATGTGGTTG+GGG | 0.390090 | 8_4:-19007420 | Msa1317580:CDS |
| TCTTAGACAAATCATGTTAG+AGG | 0.390886 | 8_4:-19006360 | Msa1317580:CDS |
| GCTCGGAACATTGCCTCAAT+GGG | 0.391563 | 8_4:-19006308 | Msa1317580:CDS |
| CGACATCGACAACAAGTAAT+CGG | 0.395243 | 8_4:-19003215 | Msa1317580:CDS |
| AGGTTCTTTATTCTAGGAAA+TGG | 0.399050 | 8_4:-19002931 | Msa1317580:three_prime_UTR |
| ATTATTCAAAGCAGAAGTTC+CGG | 0.401791 | 8_4:-19003117 | Msa1317580:three_prime_UTR |
| CCGCCTTTGCCATTGCAAAC+AGG | 0.409018 | 8_4:-19004884 | Msa1317580:CDS |
| TGTGATATATGGGTCCTTGC+TGG | 0.409461 | 8_4:-19007097 | Msa1317580:CDS |
| CTTTACTTCAGAACATTCTC+AGG | 0.412356 | 8_4:-19006232 | Msa1317580:CDS |
| TTTCTGATCATAGAAATATC+AGG | 0.414616 | 8_4:+19007012 | None:intergenic |
| GGCTCGGAACATTGCCTCAA+TGG | 0.414731 | 8_4:-19006309 | Msa1317580:CDS |
| TGATTCACAACAATTGCTAA+TGG | 0.415244 | 8_4:-19008993 | Msa1317580:CDS |
| CATGGTCTGTCATGCTGAGT+TGG | 0.417197 | 8_4:-19004325 | Msa1317580:CDS |
| AGAAACTAGATTACATTCAA+TGG | 0.418151 | 8_4:-19010767 | Msa1317580:CDS |
| CACTGGTTGTGGCCATCAAC+CGG | 0.420363 | 8_4:-19003344 | Msa1317580:CDS |
| ATCTCCAGCTATATGCTCTA+TGG | 0.420929 | 8_4:+19007155 | None:intergenic |
| ATGTTAGAGGTGATCTCAAA+AGG | 0.430983 | 8_4:-19006347 | Msa1317580:CDS |
| AAATTCGACGTATCAAAATA+GGG | 0.431205 | 8_4:-19006117 | Msa1317580:CDS |
| GAACTCTAATGTTATCCTTA+GGG | 0.437658 | 8_4:+19006381 | None:intergenic |
| ATGGTCTGTCATGCTGAGTT+GGG | 0.438199 | 8_4:-19004324 | Msa1317580:CDS |
| CGGGGATACATTATATTTCT+GGG | 0.442919 | 8_4:-19004615 | Msa1317580:CDS |
| TCTGGCAAAGGTCGAAGGCC+AGG | 0.449196 | 8_4:-19004987 | Msa1317580:CDS |
| GATAATTTGCGCATCAGAAT+GGG | 0.450695 | 8_4:-19007490 | Msa1317580:CDS |
| TAGAGTTTGTGATGTTCTCC+AGG | 0.452937 | 8_4:-19004280 | Msa1317580:intron |
| AAGAACTGCTAAGAACCTTA+TGG | 0.454177 | 8_4:-19006282 | Msa1317580:CDS |
| GAGGTAAAATGTGGATCAAA+TGG | 0.454661 | 8_4:-19003439 | Msa1317580:CDS |
| AGAGATCTTTGATGTAGAAA+AGG | 0.457176 | 8_4:+19005203 | None:intergenic |
| AAATAACTACAGTGTGGCTC+TGG | 0.457212 | 8_4:-19007290 | Msa1317580:CDS |
| GATATTTCTGAAACCGCCTT+AGG | 0.462019 | 8_4:+19006188 | None:intergenic |
| ATCATTCAAGACAGTGCTCT+TGG | 0.463289 | 8_4:-19007832 | Msa1317580:CDS |
| CGTACGTTGGGGAAGGAGCC+TGG | 0.465268 | 8_4:-19005226 | Msa1317580:CDS |
| TTTGTACAAGGGCATGTGGT+TGG | 0.465371 | 8_4:-19007422 | Msa1317580:CDS |
| GAGGAGAATGTATGGGGTAC+AGG | 0.465906 | 8_4:-19004390 | Msa1317580:CDS |
| TACGGTTCATAAATGCTTAG+TGG | 0.466643 | 8_4:+19005245 | None:intergenic |
| CAATTGCTTCGGATACCATA+AGG | 0.467841 | 8_4:+19006267 | None:intergenic |
| TTTATTCTAGGAAATGGTGT+GGG | 0.469299 | 8_4:-19002925 | Msa1317580:three_prime_UTR |
| TGTTTCGGTTGTCGAAGATT+CGG | 0.470780 | 8_4:-19010688 | Msa1317580:CDS |
| TGCATATCCATCAATTGCTT+CGG | 0.471101 | 8_4:+19006256 | None:intergenic |
| ATCTAAACCTCTGTGAAAAT+GGG | 0.471597 | 8_4:+19010817 | None:intergenic |
| CAGAGCAGTCACACGGAACA+TGG | 0.474531 | 8_4:-19005358 | Msa1317580:CDS |
| CTTTCTTCCAAATCTGGTGG+AGG | 0.475659 | 8_4:+19003179 | None:intergenic |
| GTATTTGTGAACCCGGAAAC+CGG | 0.478011 | 8_4:-19003497 | Msa1317580:CDS |
| ATAAATATCATACCAAGAAA+AGG | 0.478285 | 8_4:+19007995 | None:intergenic |
| AGATAATTTGCGCATCAGAA+TGG | 0.478457 | 8_4:-19007491 | Msa1317580:CDS |
| TAGGTTGATGACAGGGTGAA+TGG | 0.478461 | 8_4:-19006413 | Msa1317580:CDS |
| TTCATTTGTATATACCATAT+GGG | 0.478789 | 8_4:-19006003 | Msa1317580:CDS |
| GAAGCGATGAGGAGAATGTA+TGG | 0.479125 | 8_4:-19004398 | Msa1317580:CDS |
| TATTCCATATTTGGATTAGA+GGG | 0.479533 | 8_4:-19002848 | None:intergenic |
| ATGGTATCCGAAGCAATTGA+TGG | 0.482150 | 8_4:-19006263 | Msa1317580:CDS |
| AGACCATGTGTCACCATCTA+CGG | 0.483630 | 8_4:+19004340 | None:intergenic |
| GTTCATGGTTTAAATTTGAT+GGG | 0.484495 | 8_4:-19010917 | Msa1317580:five_prime_UTR |
| ACCAAAAGTCTTTCTGTGAA+GGG | 0.484824 | 8_4:+19004567 | None:intergenic |
| TAGATAAATACGAAGACCGT+TGG | 0.487438 | 8_4:-19006073 | Msa1317580:CDS |
| CCCCTCATGTTAAAGAAAAG+TGG | 0.487821 | 8_4:-19006166 | Msa1317580:CDS |
| TTGAGCTTCTTGTAAACGTG+TGG | 0.491219 | 8_4:-19003544 | Msa1317580:CDS |
| TTATTCTAGGAAATGGTGTG+GGG | 0.492632 | 8_4:-19002924 | Msa1317580:three_prime_UTR |
| TCTTTATCGCGGAGTTTCCC+TGG | 0.492885 | 8_4:-19005183 | Msa1317580:intron |
| CAGAGCTTGAAATATCCAAA+AGG | 0.493588 | 8_4:-19007180 | Msa1317580:CDS |
| GACCAAAAGTCTTTCTGTGA+AGG | 0.494411 | 8_4:+19004566 | None:intergenic |
| GCTTATTATCGAGATGTACT+AGG | 0.497421 | 8_4:-19004918 | Msa1317580:CDS |
| CCCGGAAACCGGTGTAATGC+AGG | 0.500427 | 8_4:-19003486 | Msa1317580:CDS |
| TCTTTCTGTGAAGGGTTTCG+CGG | 0.504740 | 8_4:+19004575 | None:intergenic |
| TCTGCTTCTAATGCTTCAGC+AGG | 0.505298 | 8_4:+19007535 | None:intergenic |
| ATCAGAGGTTGCTCCTCCTA+AGG | 0.505987 | 8_4:-19006204 | Msa1317580:CDS |
| TAGAAAACCTCAGTTGGCAT+TGG | 0.506230 | 8_4:-19010499 | Msa1317580:intron |
| AATGCTTCAGCAGGGGAACC+AGG | 0.508054 | 8_4:+19007544 | None:intergenic |
| ATTATATTTCTGGGTGCGGA+TGG | 0.509950 | 8_4:-19004606 | Msa1317580:CDS |
| TCAATCTGTTGAACCGAACC+GGG | 0.510873 | 8_4:-19010536 | Msa1317580:CDS |
| AGATGTCATTATCGCGATTG+TGG | 0.512339 | 8_4:-19007455 | Msa1317580:CDS |
| GATGGGACTGTAATGTAAAT+GGG | 0.513238 | 8_4:-19010900 | Msa1317580:exon |
| GAAACGCAAAGAAAGCTGAT+AGG | 0.516455 | 8_4:-19005322 | Msa1317580:CDS |
| ATTCTAGGAAATGGTGTGGG+GGG | 0.516735 | 8_4:-19002922 | Msa1317580:three_prime_UTR |
| TTAGGAGGAGCAACCTCTGA+TGG | 0.520076 | 8_4:+19006206 | None:intergenic |
| GGAAAATATCACCCTTGGCT+CGG | 0.520430 | 8_4:-19006325 | Msa1317580:CDS |
| GCATTAACTAGGTTGATGAC+AGG | 0.521338 | 8_4:-19006421 | Msa1317580:intron |
| CTTTATTCTAGGAAATGGTG+TGG | 0.524244 | 8_4:-19002926 | Msa1317580:three_prime_UTR |
| TGAGGCAATGTTCCGAGCCA+AGG | 0.526932 | 8_4:+19006313 | None:intergenic |
| AATGATCCATACAAGAGGTA+TGG | 0.526952 | 8_4:+19007849 | None:intergenic |
| GATGGAGAGCTTGAGCGGAC+TGG | 0.527406 | 8_4:-19005272 | Msa1317580:CDS |
| TGGTTATAGAAAACCTCAGT+TGG | 0.528095 | 8_4:-19010505 | Msa1317580:CDS |
| CATTCTCAGGCTTCCATCAG+AGG | 0.528749 | 8_4:-19006219 | Msa1317580:CDS |
| CATCCTCCTTGCGCTGTGGT+AGG | 0.531118 | 8_4:+19003520 | None:intergenic |
| TTTCTGGGTGCGGATGGATA+CGG | 0.531157 | 8_4:-19004600 | Msa1317580:CDS |
| ATACATTATATTTCTGGGTG+CGG | 0.533401 | 8_4:-19004610 | Msa1317580:CDS |
| GACCATGTGTCACCATCTAC+GGG | 0.533729 | 8_4:+19004341 | None:intergenic |
| TGTTAGAGGTGATCTCAAAA+GGG | 0.534000 | 8_4:-19006346 | Msa1317580:CDS |
| TTGGAGAGCAACAGCAAGGA+AGG | 0.534391 | 8_4:-19004820 | Msa1317580:intron |
| AGCAGTTCTTCTCCCCATTG+AGG | 0.534477 | 8_4:+19006295 | None:intergenic |
| CAGAATGTTTGTAGATGCAC+TGG | 0.535442 | 8_4:-19004134 | Msa1317580:CDS |
| AGCTGAGTTATCAGATTCTG+AGG | 0.535762 | 8_4:-19003378 | Msa1317580:CDS |
| ATGGACCGGGCCGTAATATG+TGG | 0.536386 | 8_4:-19008613 | Msa1317580:CDS |
| CAGGCTCCTTCCCCAACGTA+CGG | 0.537128 | 8_4:+19005227 | None:intergenic |
| GATGTCATTATCGCGATTGT+GGG | 0.537242 | 8_4:-19007454 | Msa1317580:CDS |
| ATCCCAATAAACACTGGTTG+TGG | 0.537370 | 8_4:-19003355 | Msa1317580:CDS |
| GGGTTTGAAAACAAAGTAAG+TGG | 0.537599 | 8_4:+19011036 | None:intergenic |
| GACATCGACAACAAGTAATC+GGG | 0.538295 | 8_4:-19003214 | Msa1317580:CDS |
| CTGTCCTTTGAGTTTGTCGA+AGG | 0.542286 | 8_4:-19004074 | Msa1317580:intron |
| GAGCTTTCTTCCAAATCTGG+TGG | 0.543362 | 8_4:+19003176 | None:intergenic |
| AGCATTTATGAACCGTACGT+TGG | 0.544194 | 8_4:-19005239 | Msa1317580:CDS |
| TGTGTCACCATCTACGGGCA+TGG | 0.544387 | 8_4:+19004346 | None:intergenic |
| AAAAGGGAAAATATCACCCT+TGG | 0.545228 | 8_4:-19006330 | Msa1317580:CDS |
| TTTGGCAAGGTTTATATGAG+AGG | 0.546690 | 8_4:-19003313 | Msa1317580:CDS |
| GATGATTCGTAGTTGCGCAC+TGG | 0.548354 | 8_4:+19007333 | None:intergenic |
| TGGCTTTAATCAAAATCTCT+GGG | 0.548494 | 8_4:+19007061 | None:intergenic |
| AAAATTTCCGGCATCAAATG+TGG | 0.548959 | 8_4:+19007576 | None:intergenic |
| GGGACCATAGAGCATATAGC+TGG | 0.549399 | 8_4:-19007159 | Msa1317580:CDS |
| TTGGCAAGGTTTATATGAGA+GGG | 0.550339 | 8_4:-19003312 | Msa1317580:CDS |
| TGAGCTTCTTGTAAACGTGT+GGG | 0.551828 | 8_4:-19003543 | Msa1317580:CDS |
| TAATAAGCATTGTTAAGCAA+TGG | 0.553372 | 8_4:+19004933 | None:intergenic |
| TATGAACCGTACGTTGGGGA+AGG | 0.556112 | 8_4:-19005233 | Msa1317580:CDS |
| ATTTCTGAAACCGCCTTAGG+AGG | 0.556834 | 8_4:+19006191 | None:intergenic |
| CCCAAAAGAATAAAATTACA+GGG | 0.558219 | 8_4:+19002960 | None:intergenic |
| CAAACTCAAAGGACAGTGTC+CGG | 0.559268 | 8_4:+19004081 | None:intergenic |
| TCTTTGATGTAGAAAAGGCC+AGG | 0.561427 | 8_4:+19005208 | None:intergenic |
| TTAAACTTCTCCGAAATCCT+CGG | 0.563805 | 8_4:+19010564 | None:intergenic |
| TGGCAGATGTTGTGATATAT+GGG | 0.565269 | 8_4:-19007107 | Msa1317580:CDS |
| TCAAGACAATATACCGCTAG+TGG | 0.566079 | 8_4:-19007802 | Msa1317580:CDS |
| GGGCATGGGAGGCAAAGAAT+CGG | 0.567837 | 8_4:+19004361 | None:intergenic |
| TGCGATTCCATTAATGCAGG+AGG | 0.570143 | 8_4:-19004539 | Msa1317580:CDS |
| CACAGTCTGGCAAAGGTCGA+AGG | 0.570214 | 8_4:-19004992 | Msa1317580:intron |
| GTGTCACCATCTACGGGCAT+GGG | 0.571564 | 8_4:+19004347 | None:intergenic |
| CTGGCAAAGGTCGAAGGCCA+GGG | 0.572173 | 8_4:-19004986 | Msa1317580:CDS |
| AAGCGATGAGGAGAATGTAT+GGG | 0.573370 | 8_4:-19004397 | Msa1317580:CDS |
| CCTGTTTGCAATGGCAAAGG+CGG | 0.573462 | 8_4:+19004884 | None:intergenic |
| AGGACAAGCACTGCTACTCA+AGG | 0.574453 | 8_4:-19003571 | Msa1317580:CDS |
| AAGATTGAAACTTTGATGTG+TGG | 0.575418 | 8_4:+19011077 | None:intergenic |
| ATGAGCTAAACACACGGAGA+TGG | 0.577891 | 8_4:+19011273 | None:intergenic |
| CCTCATCGCTTCTGAGAAAG+CGG | 0.578187 | 8_4:+19004409 | None:intergenic |
| CTACCACAGCGCAAGGAGGA+TGG | 0.579052 | 8_4:-19003519 | Msa1317580:CDS |
| ATATACTCCACATTTGATGC+CGG | 0.579087 | 8_4:-19007583 | Msa1317580:CDS |
| CTACGAATCATCGTTCATAG+TGG | 0.580403 | 8_4:-19007322 | Msa1317580:CDS |
| AAAGGAAAATCTGCCAAAAG+TGG | 0.583261 | 8_4:+19007370 | None:intergenic |
| ATGTTAAAGAAAAGTGGCAG+TGG | 0.584460 | 8_4:-19006160 | Msa1317580:CDS |
| TATTCTAGGAAATGGTGTGG+GGG | 0.586016 | 8_4:-19002923 | Msa1317580:three_prime_UTR |
| AGAAGAAAAGTATATTCAGA+AGG | 0.588194 | 8_4:-19005979 | Msa1317580:CDS |
| AGACGGACAACACTGTAGAC+TGG | 0.588612 | 8_4:-19008547 | Msa1317580:CDS |
| TTTCTCCACATATTACGGCC+CGG | 0.588929 | 8_4:+19008608 | None:intergenic |
| TGTGGGCCTACCACAGCGCA+AGG | 0.590873 | 8_4:-19003526 | Msa1317580:CDS |
| GAGGCAATGTTCCGAGCCAA+GGG | 0.592243 | 8_4:+19006314 | None:intergenic |
| AGAGCTTGAAATATCCAAAA+GGG | 0.592788 | 8_4:-19007179 | Msa1317580:CDS |
| GCATCAAAATCATCTCTCCC+TGG | 0.592807 | 8_4:+19004969 | None:intergenic |
| CACAAGTTCAAGAGCCGTAG+AGG | 0.593174 | 8_4:-19003458 | Msa1317580:CDS |
| GTGTTGTTCCTGCATTACAC+CGG | 0.593994 | 8_4:+19003478 | None:intergenic |
| ACGATCAATCCTGTTTGCAA+TGG | 0.595857 | 8_4:+19004875 | None:intergenic |
| TAACTACAGTGTGGCTCTGG+AGG | 0.598529 | 8_4:-19007287 | Msa1317580:intron |
| TGCAGATTCTGTTCTCAGCA+TGG | 0.599563 | 8_4:-19007127 | Msa1317580:CDS |
| TCACCATCTACGGGCATGGG+AGG | 0.602080 | 8_4:+19004350 | None:intergenic |
| ACATGTTCACAGTCTGGCAA+AGG | 0.602310 | 8_4:-19004999 | Msa1317580:intron |
| AATTGGTTTCTCGAAGCACA+TGG | 0.602803 | 8_4:+19007041 | None:intergenic |
| TTACAACACACTGAAGAACA+TGG | 0.603274 | 8_4:-19003411 | Msa1317580:CDS |
| AATCCTGTTTGCAATGGCAA+AGG | 0.604520 | 8_4:+19004881 | None:intergenic |
| GGAGAGAAGTTTAAGGCACA+AGG | 0.605935 | 8_4:-19003291 | Msa1317580:CDS |
| GGCACAAGGAGAAAGAAAAG+AGG | 0.606007 | 8_4:-19003277 | Msa1317580:CDS |
| GAGACGATGGAGAGCTTGAG+CGG | 0.607041 | 8_4:-19005277 | Msa1317580:CDS |
| TTAAGCAATGGAAGACGAGA+AGG | 0.609691 | 8_4:+19004945 | None:intergenic |
| TATTAAAACTCGTGACAAGA+CGG | 0.610904 | 8_4:-19008564 | Msa1317580:CDS |
| GTCACCTTCGACAAACTCAA+AGG | 0.616958 | 8_4:+19004070 | None:intergenic |
| AGTCTTGGAGAGCAACAGCA+AGG | 0.617660 | 8_4:-19004824 | Msa1317580:CDS |
| CAGATGAGAAAACTTTAATG+GGG | 0.618796 | 8_4:+19011016 | None:intergenic |
| CACACTGAAGAACATGGATG+AGG | 0.619414 | 8_4:-19003405 | Msa1317580:CDS |
| CATTAACTAGGTTGATGACA+GGG | 0.620671 | 8_4:-19006420 | Msa1317580:intron |
| GAAAGACTGCTCTTCCAGCA+AGG | 0.621550 | 8_4:+19007083 | None:intergenic |
| GAGGATGGTATTTGTGAACC+CGG | 0.621629 | 8_4:-19003504 | Msa1317580:CDS |
| AGAGGTTGCTCCTCCTAAGG+CGG | 0.622561 | 8_4:-19006201 | Msa1317580:CDS |
| CTGAGGATCCCAATAAACAC+TGG | 0.623324 | 8_4:-19003361 | Msa1317580:CDS |
| CACTTTGCATCATAGTGATG+AGG | 0.624790 | 8_4:-19010628 | Msa1317580:CDS |
| ACAAGAGGTATGGACTTGAA+AGG | 0.625059 | 8_4:+19007859 | None:intergenic |
| TTGCGCATCAGAATGGGCTA+CGG | 0.627483 | 8_4:-19007484 | Msa1317580:CDS |
| GCCAATCTCTAACAAAGATG+TGG | 0.628553 | 8_4:+19008961 | None:intergenic |
| TGCTTCTAATGCTTCAGCAG+GGG | 0.630300 | 8_4:+19007537 | None:intergenic |
| TATGATGAACATCATTCCAC+CGG | 0.630963 | 8_4:-19004100 | Msa1317580:CDS |
| CTGCTTCTAATGCTTCAGCA+GGG | 0.632700 | 8_4:+19007536 | None:intergenic |
| GGACAAGCACTGCTACTCAA+GGG | 0.633281 | 8_4:-19003570 | Msa1317580:CDS |
| CATTTATGAACCGTACGTTG+GGG | 0.634494 | 8_4:-19005237 | Msa1317580:CDS |
| CAAGACAATATACCGCTAGT+GGG | 0.637642 | 8_4:-19007801 | Msa1317580:CDS |
| GAGGAGTATGTGTTAGACAT+TGG | 0.638600 | 8_4:-19010609 | Msa1317580:CDS |
| TCTTGAATGATCCATACAAG+AGG | 0.641710 | 8_4:+19007844 | None:intergenic |
| AGAGCAGTCACACGGAACAT+GGG | 0.644057 | 8_4:-19005357 | Msa1317580:CDS |
| TGCCCGTAGATGGTGACACA+TGG | 0.646414 | 8_4:-19004343 | Msa1317580:CDS |
| AAGTTCAATCTTCCCACTAG+CGG | 0.648000 | 8_4:+19007789 | None:intergenic |
| CCGCTTTCTCAGAAGCGATG+AGG | 0.650880 | 8_4:-19004409 | Msa1317580:CDS |
| GATTTACACGAAAGAGACGA+TGG | 0.651159 | 8_4:-19005290 | Msa1317580:CDS |
| CATCAAAGATCTCTTTATCG+CGG | 0.658337 | 8_4:-19005194 | Msa1317580:CDS |
| AGAGCCGTAGAGGTAAAATG+TGG | 0.658391 | 8_4:-19003448 | Msa1317580:CDS |
| GCAGTCACACGGAACATGGG+AGG | 0.664656 | 8_4:-19005354 | Msa1317580:CDS |
| ATACCATCCTCCTTGCGCTG+TGG | 0.665035 | 8_4:+19003516 | None:intergenic |
| AGCGATGAGGAGAATGTATG+GGG | 0.668638 | 8_4:-19004396 | Msa1317580:CDS |
| TAGCGGTATATTGTCTTGAG+CGG | 0.669578 | 8_4:+19007806 | None:intergenic |
| CTGTATATGAGCTAAACACA+CGG | 0.675264 | 8_4:+19011267 | None:intergenic |
| GATAGAACAGAGCAGTCACA+CGG | 0.676025 | 8_4:-19005365 | Msa1317580:CDS |
| ACTCAAAGGACAGTGTCCGG+TGG | 0.677184 | 8_4:+19004084 | None:intergenic |
| GAACTAACCAATGCCAACTG+AGG | 0.684691 | 8_4:+19010492 | None:intergenic |
| CCAAAAGAATAAAATTACAG+GGG | 0.687060 | 8_4:+19002961 | None:intergenic |
| TGACAAAGCCTGCAAAACAA+CGG | 0.688487 | 8_4:+19007393 | None:intergenic |
| CTCGGAACATTGCCTCAATG+GGG | 0.695600 | 8_4:-19006307 | Msa1317580:CDS |
| GTTTGGAAAGACAACAACAG+AGG | 0.709428 | 8_4:+19007735 | None:intergenic |
| GTATGTGTTAGACATTGGTG+AGG | 0.709592 | 8_4:-19010604 | Msa1317580:CDS |
| GGGCCTACCACAGCGCAAGG+AGG | 0.724672 | 8_4:-19003523 | Msa1317580:CDS |
| GTTAACAAATAACTACAGTG+TGG | 0.732246 | 8_4:-19007296 | Msa1317580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATTCCA+TGG | + | chr8_4:19005048-19005067 | None:intergenic | 10.0% |
| !!! | TATTATTTATGTTTTCTTTA+TGG | + | chr8_4:19010307-19010326 | None:intergenic | 10.0% |
| !! | CAACAAAACAAAAAAAAAAA+AGG | + | chr8_4:19003197-19003216 | None:intergenic | 15.0% |
| !!! | CTTTTTTTTTTTTGTTTTGT+TGG | - | chr8_4:19003195-19003214 | Msa1317580:CDS | 15.0% |
| !!! | TTTTATAAGATCTTTCAAAT+AGG | - | chr8_4:19004494-19004513 | Msa1317580:intron | 15.0% |
| !!! | TGTTGTTATTATTACTATTA+CGG | - | chr8_4:19005448-19005467 | Msa1317580:intron | 15.0% |
| !! | GGATTATAAATAAAATTACA+AGG | + | chr8_4:19005932-19005951 | None:intergenic | 15.0% |
| !!! | CATTTTCTTTTCAAATTTTA+TGG | - | chr8_4:19006885-19006904 | Msa1317580:intron | 15.0% |
| !!! | TTTAGTTTATTTATCTGTTA+TGG | - | chr8_4:19008650-19008669 | Msa1317580:intron | 15.0% |
| !! | AAAAAAAAAAAACAAGAATG+AGG | + | chr8_4:19009414-19009433 | None:intergenic | 15.0% |
| !!! | TCATTCTTGTTTTTTTTTTT+TGG | - | chr8_4:19009413-19009432 | Msa1317580:intron | 15.0% |
| !!! | ACAAATATTTTAGTTTTCTA+TGG | - | chr8_4:19010187-19010206 | Msa1317580:intron | 15.0% |
| !! | AAGATATCTACTTTAAATTA+CGG | - | chr8_4:19010216-19010235 | Msa1317580:intron | 15.0% |
| !! | TTAATTAATGTCTTAGTTAA+TGG | - | chr8_4:19010385-19010404 | Msa1317580:intron | 15.0% |
| !! | TAGAAAAATTAAATAGAATG+AGG | - | chr8_4:19010896-19010915 | Msa1317580:exon | 15.0% |
| !! | AGAAAAAAAGAATTTATATC+CGG | + | chr8_4:19011042-19011061 | None:intergenic | 15.0% |
| !! | AAAAATCACATGCAAATAAA+GGG | + | chr8_4:19003151-19003170 | None:intergenic | 20.0% |
| !!! | ATGTGATTTTTCATTTTGTT+TGG | - | chr8_4:19003160-19003179 | Msa1317580:CDS | 20.0% |
| !! | CTATAAATGCTTAATTAAGT+TGG | - | chr8_4:19004182-19004201 | Msa1317580:intron | 20.0% |
| !! | AACAATTTAGTTAATTGCTT+AGG | - | chr8_4:19004321-19004340 | Msa1317580:CDS | 20.0% |
| !! | CAATATAAGTATTACATTCT+TGG | - | chr8_4:19004696-19004715 | Msa1317580:intron | 20.0% |
| !!! | TTTAAATTTTGTTTCAGTTG+TGG | - | chr8_4:19004732-19004751 | Msa1317580:intron | 20.0% |
| !! | AAATGTTGTATCTATAAATG+TGG | - | chr8_4:19004829-19004848 | Msa1317580:CDS | 20.0% |
| !!! | ATAGTTTCAATTTCTTTTGA+AGG | - | chr8_4:19005102-19005121 | Msa1317580:intron | 20.0% |
| !!! | TATATACTTGTCTTACATTT+TGG | - | chr8_4:19005217-19005236 | Msa1317580:CDS | 20.0% |
| !! | TTTGGTCTAAATATTATTTC+TGG | - | chr8_4:19005235-19005254 | Msa1317580:CDS | 20.0% |
| !! | AAAAAATACTGTAAATGATG+TGG | + | chr8_4:19005406-19005425 | None:intergenic | 20.0% |
| !! | ATAAATATCATACCAAGAAA+AGG | + | chr8_4:19006145-19006164 | None:intergenic | 20.0% |
| !!! | ATAAAATCATTTGTGTTACT+TGG | + | chr8_4:19006236-19006255 | None:intergenic | 20.0% |
| !!! | ATGTCAACTAATGTTTTTAT+GGG | - | chr8_4:19006519-19006538 | Msa1317580:intron | 20.0% |
| !! | TACATTAAAAGATATAGAGT+AGG | + | chr8_4:19007162-19007181 | None:intergenic | 20.0% |
| !! | ATACTCTACGATTTATAAAA+TGG | + | chr8_4:19007258-19007277 | None:intergenic | 20.0% |
| !!! | AGTATTTTAGATTATCTCTT+AGG | - | chr8_4:19007273-19007292 | Msa1317580:intron | 20.0% |
| !!! | GTATTTTAGATTATCTCTTA+GGG | - | chr8_4:19007274-19007293 | Msa1317580:intron | 20.0% |
| !!! | TATTTATTTCCTGATTTTCT+CGG | - | chr8_4:19007362-19007381 | Msa1317580:CDS | 20.0% |
| !!! | GAAATTACTAACTATTTTGT+TGG | - | chr8_4:19007694-19007713 | Msa1317580:intron | 20.0% |
| !! | ATTCATTTGTATATACCATA+TGG | - | chr8_4:19008133-19008152 | Msa1317580:intron | 20.0% |
| !! | TTCATTTGTATATACCATAT+GGG | - | chr8_4:19008134-19008153 | Msa1317580:intron | 20.0% |
| !! | TATTACCAAAAAAAGAATAG+AGG | - | chr8_4:19008182-19008201 | Msa1317580:intron | 20.0% |
| !! | TACTTTCTTCATTAAGTATT+AGG | + | chr8_4:19008248-19008267 | None:intergenic | 20.0% |
| !!! | ATTAATTGCTTTAGATATTG+TGG | - | chr8_4:19008280-19008299 | Msa1317580:intron | 20.0% |
| !!! | TTTTCCTATTTTTATTTGCA+AGG | - | chr8_4:19008436-19008455 | Msa1317580:intron | 20.0% |
| !!! | ATTTGTCTTCATACAATTTT+CGG | - | chr8_4:19009346-19009365 | Msa1317580:intron | 20.0% |
| !! | TTTCATATATTTGGATAAAG+TGG | + | chr8_4:19010541-19010560 | None:intergenic | 20.0% |
| ! | GAGTGAAAAAAGAAAGAAAA+TGG | + | chr8_4:19002954-19002973 | None:intergenic | 25.0% |
| ! | AAAATGGGAAAAAAGATTGT+GGG | + | chr8_4:19003032-19003051 | None:intergenic | 25.0% |
| ! | AAAAATGGGAAAAAAGATTG+TGG | + | chr8_4:19003033-19003052 | None:intergenic | 25.0% |
| ! | GAAAAATCACATGCAAATAA+AGG | + | chr8_4:19003152-19003171 | None:intergenic | 25.0% |
| ! | AGTTCATGGTTTAAATTTGA+TGG | - | chr8_4:19003219-19003238 | Msa1317580:CDS | 25.0% |
| ! | GTTCATGGTTTAAATTTGAT+GGG | - | chr8_4:19003220-19003239 | Msa1317580:CDS | 25.0% |
| !!! | ATAAACTCCCTTTTTTCAAT+GGG | + | chr8_4:19003281-19003300 | None:intergenic | 25.0% |
| !!! | AATAAACTCCCTTTTTTCAA+TGG | + | chr8_4:19003282-19003301 | None:intergenic | 25.0% |
| ! | TTGAAAAAAGGGAGTTTATT+TGG | - | chr8_4:19003282-19003301 | Msa1317580:CDS | 25.0% |
| ! | AGAAACTAGATTACATTCAA+TGG | - | chr8_4:19003370-19003389 | Msa1317580:CDS | 25.0% |
| ! | TATGCATTCTGATGAAAATT+AGG | + | chr8_4:19003672-19003691 | None:intergenic | 25.0% |
| !!! | GTGTTTGTTTAGAATGTTTT+TGG | - | chr8_4:19003704-19003723 | Msa1317580:intron | 25.0% |
| !!! | GTTTTTGGTTTGTTAATTGT+TGG | - | chr8_4:19003719-19003738 | Msa1317580:intron | 25.0% |
| ! | ATTTACTTATGTAGCATCTA+TGG | + | chr8_4:19004285-19004304 | None:intergenic | 25.0% |
| ! | ATAGATGCTACATAAGTAAA+TGG | - | chr8_4:19004284-19004303 | Msa1317580:CDS | 25.0% |
| ! | TTATGAAAATCATCTGTACA+AGG | + | chr8_4:19004415-19004434 | None:intergenic | 25.0% |
| ! | GTGAAAATATAAGCTCAAAT+TGG | - | chr8_4:19004458-19004477 | Msa1317580:intron | 25.0% |
| !!! | TTTCAGTTGTGGTTTTATTA+TGG | - | chr8_4:19004743-19004762 | Msa1317580:intron | 25.0% |
| !!! | CAATTTCTTTTGAAGGTATT+TGG | - | chr8_4:19005109-19005128 | Msa1317580:intron | 25.0% |
| ! | TTAGGCAAAAGAAAAGAAAT+AGG | - | chr8_4:19005277-19005296 | Msa1317580:CDS | 25.0% |
| ! | TAGGCAAAAGAAAAGAAATA+GGG | - | chr8_4:19005278-19005297 | Msa1317580:CDS | 25.0% |
| ! | TTAAGTTTCTCCACATATTA+CGG | + | chr8_4:19005537-19005556 | None:intergenic | 25.0% |
| !!! | CGAGTTTTAATAATAGTGAT+GGG | + | chr8_4:19005565-19005584 | None:intergenic | 25.0% |
| !!! | ACGAGTTTTAATAATAGTGA+TGG | + | chr8_4:19005566-19005585 | None:intergenic | 25.0% |
| ! | TAATTATTCTTCTACCTGAA+TGG | - | chr8_4:19005756-19005775 | Msa1317580:intron | 25.0% |
| !! | TATTATCCATTTTCAGTTTG+CGG | - | chr8_4:19005853-19005872 | Msa1317580:intron | 25.0% |
| ! | ATTAATCCAACAAAAAGAGT+AGG | + | chr8_4:19006042-19006061 | None:intergenic | 25.0% |
| ! | TACTTGGAGAAAGAAATTAA+TGG | + | chr8_4:19006220-19006239 | None:intergenic | 25.0% |
| !!! | TATTTGTTACAGTTTTTTGC+AGG | - | chr8_4:19006253-19006272 | Msa1317580:CDS | 25.0% |
| !! | AGATTGAACTTTTGAATGAT+TGG | - | chr8_4:19006360-19006379 | Msa1317580:CDS | 25.0% |
| !!! | CATGTCAACTAATGTTTTTA+TGG | - | chr8_4:19006518-19006537 | Msa1317580:intron | 25.0% |
| ! | AGGAATGACATAAAAATTTC+CGG | + | chr8_4:19006576-19006595 | None:intergenic | 25.0% |
| ! | TTTCTGATCATAGAAATATC+AGG | + | chr8_4:19007128-19007147 | None:intergenic | 25.0% |
| ! | GTATATGTATACCTATATAC+CGG | - | chr8_4:19007384-19007403 | Msa1317580:CDS | 25.0% |
| ! | TATATGTATACCTATATACC+GGG | - | chr8_4:19007385-19007404 | Msa1317580:CDS | 25.0% |
| !! | GTTGTGCAATTTAAGATAAA+CGG | + | chr8_4:19007487-19007506 | None:intergenic | 25.0% |
| ! | TCTTATATTAGATGTTTGCT+CGG | - | chr8_4:19007558-19007577 | Msa1317580:CDS | 25.0% |
| ! | TTCCTACAATAATCTAGATT+AGG | - | chr8_4:19007607-19007626 | Msa1317580:intron | 25.0% |
| ! | AAAGTTTCTCATATATTGTC+TGG | - | chr8_4:19007672-19007691 | Msa1317580:intron | 25.0% |
| ! | AAATTCGACGTATCAAAATA+GGG | - | chr8_4:19008020-19008039 | Msa1317580:CDS | 25.0% |
| !! | AGAAGAAAAGTATATTCAGA+AGG | - | chr8_4:19008158-19008177 | Msa1317580:intron | 25.0% |
| ! | TTTCTTCATTAAGTATTAGG+AGG | + | chr8_4:19008245-19008264 | None:intergenic | 25.0% |
| ! | TTGTGGAACATAAAAAAATC+AGG | - | chr8_4:19008297-19008316 | Msa1317580:intron | 25.0% |
| ! | TATTAACTAGGAAGATTGTT+GGG | - | chr8_4:19008330-19008349 | Msa1317580:intron | 25.0% |
| ! | TCTAATAAGTCAATTCAAAC+AGG | + | chr8_4:19008483-19008502 | None:intergenic | 25.0% |
| ! | AAGTACTATTGAGATTGTTT+GGG | - | chr8_4:19008519-19008538 | Msa1317580:intron | 25.0% |
| !!! | TAAGATGTTTTAAGAGCTTA+CGG | + | chr8_4:19008598-19008617 | None:intergenic | 25.0% |
| ! | TTAAAACATGACTTAAGCTT+TGG | + | chr8_4:19008741-19008760 | None:intergenic | 25.0% |
| ! | CATATTTGGTACAAATTGTT+TGG | - | chr8_4:19009054-19009073 | Msa1317580:intron | 25.0% |
| !! | TAATAAGCATTGTTAAGCAA+TGG | + | chr8_4:19009207-19009226 | None:intergenic | 25.0% |
| !!! | AACACATATAATGGGTTTAA+AGG | + | chr8_4:19009637-19009656 | None:intergenic | 25.0% |
| !! | AACTCTAAAAATGATCTTGT+GGG | + | chr8_4:19009844-19009863 | None:intergenic | 25.0% |
| !! | AAACTCTAAAAATGATCTTG+TGG | + | chr8_4:19009845-19009864 | None:intergenic | 25.0% |
| ! | AAGAAATCCATTAATGAAAC+CGG | + | chr8_4:19009890-19009909 | None:intergenic | 25.0% |
| !!! | CATTAATGGATTTCTTTCAT+TGG | - | chr8_4:19009894-19009913 | Msa1317580:intron | 25.0% |
| !! | ATTTGTTTCCTTTGTTTGTT+TGG | - | chr8_4:19010105-19010124 | Msa1317580:intron | 25.0% |
| ! | ATTAAACCATGAGGATAAAA+TGG | + | chr8_4:19010137-19010156 | None:intergenic | 25.0% |
| ! | ATATGAAAGATTAAACCATG+AGG | + | chr8_4:19010146-19010165 | None:intergenic | 25.0% |
| ! | TCCAAATATATGAAAATTGC+AGG | - | chr8_4:19010546-19010565 | Msa1317580:CDS | 25.0% |
| !! | TCCTGCAATTTTCATATATT+TGG | + | chr8_4:19010550-19010569 | None:intergenic | 25.0% |
| !! | ATTGTGATTTTCATTCAGTA+AGG | - | chr8_4:19011087-19011106 | Msa1317580:five_prime_UTR | 25.0% |
| ! | CCAAAAGAATAAAATTACAG+GGG | + | chr8_4:19011179-19011198 | None:intergenic | 25.0% |
| ! | CCCAAAAGAATAAAATTACA+GGG | + | chr8_4:19011180-19011199 | None:intergenic | 25.0% |
| !! | CCCTGTAATTTTATTCTTTT+GGG | - | chr8_4:19011177-19011196 | Msa1317580:five_prime_UTR | 25.0% |
| ! | TCCCAAAAGAATAAAATTAC+AGG | + | chr8_4:19011181-19011200 | None:intergenic | 25.0% |
| !!! | GTAATTTTATTCTTTTGGGA+TGG | - | chr8_4:19011181-19011200 | Msa1317580:five_prime_UTR | 25.0% |
| ! | TGTGCAATATATTCCATATT+TGG | - | chr8_4:19011280-19011299 | Msa1317580:five_prime_UTR | 25.0% |
| AATGGAAAGAAACGAAGATT+TGG | + | chr8_4:19002936-19002955 | None:intergenic | 30.0% | |
| AAATGGGAAAAAAGATTGTG+GGG | + | chr8_4:19003031-19003050 | None:intergenic | 30.0% | |
| TGTGTGGAATGAAGAAAAAT+GGG | + | chr8_4:19003047-19003066 | None:intergenic | 30.0% | |
| ATGTGTGGAATGAAGAAAAA+TGG | + | chr8_4:19003048-19003067 | None:intergenic | 30.0% | |
| AAGATTGAAACTTTGATGTG+TGG | + | chr8_4:19003063-19003082 | None:intergenic | 30.0% | |
| CAGATGAGAAAACTTTAATG+GGG | + | chr8_4:19003124-19003143 | None:intergenic | 30.0% | |
| CCAGATGAGAAAACTTTAAT+GGG | + | chr8_4:19003125-19003144 | None:intergenic | 30.0% | |
| ! | CCATTAAAGTTTTCTCATCT+GGG | - | chr8_4:19003123-19003142 | Msa1317580:three_prime_UTR | 30.0% |
| !!! | TTTGTTTTGTTGGAAGTTCA+TGG | - | chr8_4:19003205-19003224 | Msa1317580:CDS | 30.0% |
| ATCTAAACCTCTGTGAAAAT+GGG | + | chr8_4:19003323-19003342 | None:intergenic | 30.0% | |
| TCAAATGTTTCTTCCTGTTT+CGG | - | chr8_4:19003434-19003453 | Msa1317580:CDS | 30.0% | |
| !! | TTGGTTTGTTAATTGTTGGT+AGG | - | chr8_4:19003723-19003742 | Msa1317580:intron | 30.0% |
| TATGTGTATTTGAGTCTCTA+CGG | - | chr8_4:19003775-19003794 | Msa1317580:intron | 30.0% | |
| TTCCATAAGCTTCAAATTGT+AGG | - | chr8_4:19003862-19003881 | Msa1317580:intron | 30.0% | |
| ! | TACCTACAATTTGAAGCTTA+TGG | + | chr8_4:19003867-19003886 | None:intergenic | 30.0% |
| ATAAGCTTCAAATTGTAGGT+AGG | - | chr8_4:19003866-19003885 | Msa1317580:intron | 30.0% | |
| TTTGAGTCTTTGAGTATGTT+TGG | - | chr8_4:19003950-19003969 | Msa1317580:intron | 30.0% | |
| ACATAAGTAAATGGTTTACG+AGG | - | chr8_4:19004293-19004312 | Msa1317580:CDS | 30.0% | |
| CATAAGTAAATGGTTTACGA+GGG | - | chr8_4:19004294-19004313 | Msa1317580:CDS | 30.0% | |
| !! | GTTGTTTCTACTATTGAAGA+TGG | - | chr8_4:19004366-19004385 | Msa1317580:CDS | 30.0% |
| TACTATTGAAGATGGAATGA+GGG | - | chr8_4:19004374-19004393 | Msa1317580:CDS | 30.0% | |
| AGAGCTCATAAATATAGCTT+CGG | + | chr8_4:19004574-19004593 | None:intergenic | 30.0% | |
| ! | TCAAATGCCTTTTGTATACA+TGG | - | chr8_4:19004649-19004668 | Msa1317580:CDS | 30.0% |
| !!! | ATTATGGTTTTTGAAGTTGC+TGG | - | chr8_4:19004759-19004778 | Msa1317580:intron | 30.0% |
| !! | GCTTTGAAATTGCAGATAAA+TGG | - | chr8_4:19004784-19004803 | Msa1317580:intron | 30.0% |
| ! | TGAGCTGAAAATTTAGAACT+TGG | - | chr8_4:19004855-19004874 | Msa1317580:CDS | 30.0% |
| ! | GAGCTGAAAATTTAGAACTT+GGG | - | chr8_4:19004856-19004875 | Msa1317580:CDS | 30.0% |
| TATTCCATGGATCAATAACA+GGG | + | chr8_4:19005035-19005054 | None:intergenic | 30.0% | |
| ATATTCCATGGATCAATAAC+AGG | + | chr8_4:19005036-19005055 | None:intergenic | 30.0% | |
| TGATTCACAACAATTGCTAA+TGG | - | chr8_4:19005144-19005163 | Msa1317580:intron | 30.0% | |
| !! | GGTCTAAATATTATTTCTGG+TGG | - | chr8_4:19005238-19005257 | Msa1317580:CDS | 30.0% |
| ! | TTTCTTTTGCCTAAACTCAA+AGG | + | chr8_4:19005271-19005290 | None:intergenic | 30.0% |
| GAAAACATTGATCATTTAGC+AGG | + | chr8_4:19005306-19005325 | None:intergenic | 30.0% | |
| ! | TAATAATCTCTACCTTTTGC+AGG | - | chr8_4:19005486-19005505 | Msa1317580:intron | 30.0% |
| TATTAAAACTCGTGACAAGA+CGG | - | chr8_4:19005573-19005592 | Msa1317580:intron | 30.0% | |
| GTAGAAGAATAATTACACAC+AGG | + | chr8_4:19005751-19005770 | None:intergenic | 30.0% | |
| ! | TTAAAGCTTGATTGCACTTT+TGG | + | chr8_4:19005809-19005828 | None:intergenic | 30.0% |
| TTGCGATGCTCAAAATATTA+TGG | - | chr8_4:19005961-19005980 | Msa1317580:CDS | 30.0% | |
| ! | TGAAAACCTACTCTTTTTGT+TGG | - | chr8_4:19006033-19006052 | Msa1317580:CDS | 30.0% |
| ! | TAATGGTACATGAAGTATTC+AGG | + | chr8_4:19006203-19006222 | None:intergenic | 30.0% |
| ! | GGAAATTTTTATGTCATTCC+TGG | - | chr8_4:19006575-19006594 | Msa1317580:intron | 30.0% |
| ATTAGAAGCAGATGCATTTA+TGG | - | chr8_4:19006613-19006632 | Msa1317580:intron | 30.0% | |
| CTGGAATTATCTTTGCTTAA+AGG | + | chr8_4:19006788-19006807 | None:intergenic | 30.0% | |
| GTTAACAAATAACTACAGTG+TGG | - | chr8_4:19006841-19006860 | Msa1317580:intron | 30.0% | |
| GTCTGATGAAACAGAATATA+CGG | + | chr8_4:19006930-19006949 | None:intergenic | 30.0% | |
| AGAGCTTGAAATATCCAAAA+GGG | - | chr8_4:19006958-19006977 | Msa1317580:intron | 30.0% | |
| !! | TGGCTTTAATCAAAATCTCT+GGG | + | chr8_4:19007079-19007098 | None:intergenic | 30.0% |
| !! | ATGGCTTTAATCAAAATCTC+TGG | + | chr8_4:19007080-19007099 | None:intergenic | 30.0% |
| GAAATATCAGGAGCAATAAT+TGG | + | chr8_4:19007116-19007135 | None:intergenic | 30.0% | |
| AGTGTCTTAGATTAATTCCT+AGG | - | chr8_4:19007231-19007250 | Msa1317580:intron | 30.0% | |
| ACGATTTATAAAATGGTCCT+AGG | + | chr8_4:19007251-19007270 | None:intergenic | 30.0% | |
| TTTAGATTATCTCTTAGGGT+TGG | - | chr8_4:19007278-19007297 | Msa1317580:intron | 30.0% | |
| ATACATATACCGAGAAAATC+AGG | + | chr8_4:19007374-19007393 | None:intergenic | 30.0% | |
| AAAAGACTAAACACTAATCC+CGG | + | chr8_4:19007406-19007425 | None:intergenic | 30.0% | |
| AAAATAGACCAATAGCATGA+TGG | + | chr8_4:19007521-19007540 | None:intergenic | 30.0% | |
| AGCCTAATCTAGATTATTGT+AGG | + | chr8_4:19007612-19007631 | None:intergenic | 30.0% | |
| ! | CTATTTTGTTGGCATTAACT+AGG | - | chr8_4:19007705-19007724 | Msa1317580:intron | 30.0% |
| GAACTCTAATGTTATCCTTA+GGG | + | chr8_4:19007759-19007778 | None:intergenic | 30.0% | |
| AGAACTCTAATGTTATCCTT+AGG | + | chr8_4:19007760-19007779 | None:intergenic | 30.0% | |
| TCTTAGACAAATCATGTTAG+AGG | - | chr8_4:19007777-19007796 | Msa1317580:CDS | 30.0% | |
| !!! | CTATTTTGATACGTCGAATT+TGG | + | chr8_4:19008021-19008040 | None:intergenic | 30.0% |
| CAAATTCGACGTATCAAAAT+AGG | - | chr8_4:19008019-19008038 | Msa1317580:CDS | 30.0% | |
| ! | ATACTTTTCTTCTTCCCATA+TGG | + | chr8_4:19008151-19008170 | None:intergenic | 30.0% |
| !!! | TTCGTCCTCTATTCTTTTTT+TGG | + | chr8_4:19008190-19008209 | None:intergenic | 30.0% |
| ! | GGATTTTCTGTGTATTAACT+AGG | - | chr8_4:19008318-19008337 | Msa1317580:intron | 30.0% |
| GTATTAACTAGGAAGATTGT+TGG | - | chr8_4:19008329-19008348 | Msa1317580:intron | 30.0% | |
| CCATCCTTGCAAATAAAAAT+AGG | + | chr8_4:19008443-19008462 | None:intergenic | 30.0% | |
| !!! | CCTATTTTTATTTGCAAGGA+TGG | - | chr8_4:19008440-19008459 | Msa1317580:intron | 30.0% |
| CAAGTACTATTGAGATTGTT+TGG | - | chr8_4:19008518-19008537 | Msa1317580:intron | 30.0% | |
| AGATTGTTTGGGAGAATTTA+TGG | - | chr8_4:19008530-19008549 | Msa1317580:intron | 30.0% | |
| AATAAGCTAAAAACAGCCTA+TGG | + | chr8_4:19008574-19008593 | None:intergenic | 30.0% | |
| AGAGATCTTTGATGTAGAAA+AGG | + | chr8_4:19008937-19008956 | None:intergenic | 30.0% | |
| AAATATGATGCTGTTGCAAA+AGG | + | chr8_4:19009041-19009060 | None:intergenic | 30.0% | |
| ! | TTTTGCAACAGCATCATATT+TGG | - | chr8_4:19009040-19009059 | Msa1317580:intron | 30.0% |
| ATCGTTTACACAAAAATGCT+TGG | - | chr8_4:19009280-19009299 | Msa1317580:intron | 30.0% | |
| TTACACAAAAATGCTTGGAT+TGG | - | chr8_4:19009285-19009304 | Msa1317580:intron | 30.0% | |
| !! | ATACATTATATTTCTGGGTG+CGG | - | chr8_4:19009527-19009546 | Msa1317580:intron | 30.0% |
| TCGTGAGAAACACATATAAT+GGG | + | chr8_4:19009645-19009664 | None:intergenic | 30.0% | |
| AGAAATCCATTAATGAAACC+GGG | + | chr8_4:19009889-19009908 | None:intergenic | 30.0% | |
| !! | TTCCTTTGTTTGTTTGGTTT+TGG | - | chr8_4:19010111-19010130 | Msa1317580:intron | 30.0% |
| GGTGCAAGTAAAATAATCAA+TGG | - | chr8_4:19010362-19010381 | Msa1317580:intron | 30.0% | |
| CAACTTTACTGTCAAGAATA+GGG | + | chr8_4:19010428-19010447 | None:intergenic | 30.0% | |
| ACAACTTTACTGTCAAGAAT+AGG | + | chr8_4:19010429-19010448 | None:intergenic | 30.0% | |
| ATTATTCAAAGCAGAAGTTC+CGG | - | chr8_4:19011020-19011039 | Msa1317580:five_prime_UTR | 30.0% | |
| ! | CCCCTGTAATTTTATTCTTT+TGG | - | chr8_4:19011176-19011195 | Msa1317580:five_prime_UTR | 30.0% |
| !!! | TTTATTCTTTTGGGATGGTT+AGG | - | chr8_4:19011186-19011205 | Msa1317580:five_prime_UTR | 30.0% |
| ATGGTTAGGTTCTTTATTCT+AGG | - | chr8_4:19011200-19011219 | Msa1317580:five_prime_UTR | 30.0% | |
| ! | AGGTTCTTTATTCTAGGAAA+TGG | - | chr8_4:19011206-19011225 | Msa1317580:five_prime_UTR | 30.0% |
| ! | TTTATTCTAGGAAATGGTGT+GGG | - | chr8_4:19011212-19011231 | Msa1317580:five_prime_UTR | 30.0% |
| CTGTATATGAGCTAAACACA+CGG | + | chr8_4:19002873-19002892 | None:intergenic | 35.0% | |
| ! | GAAGATTTGGCGTTGAAAAA+TGG | + | chr8_4:19002923-19002942 | None:intergenic | 35.0% |
| TGGGGTGTGAAGATAAAAAT+GGG | + | chr8_4:19003013-19003032 | None:intergenic | 35.0% | |
| GGGTTTGAAAACAAAGTAAG+TGG | + | chr8_4:19003104-19003123 | None:intergenic | 35.0% | |
| ! | CCCATTAAAGTTTTCTCATC+TGG | - | chr8_4:19003122-19003141 | Msa1317580:three_prime_UTR | 35.0% |
| CCCAGATGAGAAAACTTTAA+TGG | + | chr8_4:19003126-19003145 | None:intergenic | 35.0% | |
| TGATGGGACTGTAATGTAAA+TGG | - | chr8_4:19003236-19003255 | Msa1317580:CDS | 35.0% | |
| GATGGGACTGTAATGTAAAT+GGG | - | chr8_4:19003237-19003256 | Msa1317580:CDS | 35.0% | |
| TCAACGATCCCATTGAAAAA+AGG | - | chr8_4:19003270-19003289 | Msa1317580:CDS | 35.0% | |
| CAACGATCCCATTGAAAAAA+GGG | - | chr8_4:19003271-19003290 | Msa1317580:CDS | 35.0% | |
| GATCTAAACCTCTGTGAAAA+TGG | + | chr8_4:19003324-19003343 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTTGCCGAGGATTT+CGG | - | chr8_4:19003563-19003582 | Msa1317580:CDS | 35.0% |
| TTAAACTTCTCCGAAATCCT+CGG | + | chr8_4:19003576-19003595 | None:intergenic | 35.0% | |
| TGGTTATAGAAAACCTCAGT+TGG | - | chr8_4:19003632-19003651 | Msa1317580:intron | 35.0% | |
| AGAATGCATATGTTGCATGT+TGG | - | chr8_4:19003682-19003701 | Msa1317580:intron | 35.0% | |
| ! | GTTAATTGTTGGTAGGATTG+AGG | - | chr8_4:19003730-19003749 | Msa1317580:intron | 35.0% |
| ATGTGTATTTGAGTCTCTAC+GGG | - | chr8_4:19003776-19003795 | Msa1317580:intron | 35.0% | |
| ACTGAGCTAGAGTAAATTGT+AGG | - | chr8_4:19003889-19003908 | Msa1317580:intron | 35.0% | |
| AGCTAGAGTAAATTGTAGGT+AGG | - | chr8_4:19003893-19003912 | Msa1317580:intron | 35.0% | |
| CAAAGACTCAAAAACATGCT+AGG | + | chr8_4:19003942-19003961 | None:intergenic | 35.0% | |
| AGACATACATAGGACTTACT+TGG | + | chr8_4:19004212-19004231 | None:intergenic | 35.0% | |
| AGTAAGTCCTATGTATGTCT+AGG | - | chr8_4:19004212-19004231 | Msa1317580:intron | 35.0% | |
| GTAAGTCCTATGTATGTCTA+GGG | - | chr8_4:19004213-19004232 | Msa1317580:intron | 35.0% | |
| TTAGGACTCATTATAAGAGC+TGG | - | chr8_4:19004339-19004358 | Msa1317580:CDS | 35.0% | |
| CTACTATTGAAGATGGAATG+AGG | - | chr8_4:19004373-19004392 | Msa1317580:CDS | 35.0% | |
| !! | CATAACATATCTTCTAGAGC+TGG | - | chr8_4:19004430-19004449 | Msa1317580:intron | 35.0% |
| ! | TAAGCTCAAATTGGTCTCAT+AGG | - | chr8_4:19004467-19004486 | Msa1317580:intron | 35.0% |
| CTCATAAATATAGCTTCGGA+AGG | + | chr8_4:19004570-19004589 | None:intergenic | 35.0% | |
| ACAAGCTCCATGTATACAAA+AGG | + | chr8_4:19004659-19004678 | None:intergenic | 35.0% | |
| ! | CTGAAAATTTAGAACTTGGG+TGG | - | chr8_4:19004859-19004878 | Msa1317580:CDS | 35.0% |
| ! | TTTTCCCTGTTATTGATCCA+TGG | - | chr8_4:19005028-19005047 | Msa1317580:intron | 35.0% |
| !! | GGAAAAGTACCTTTGAGTTT+AGG | - | chr8_4:19005259-19005278 | Msa1317580:CDS | 35.0% |
| ATAATTACACACAGGTGTCA+AGG | + | chr8_4:19005743-19005762 | None:intergenic | 35.0% | |
| !!! | GACTTCTATTTTGACCATTC+AGG | + | chr8_4:19005773-19005792 | None:intergenic | 35.0% |
| !!! | CACTTTTGGTTCTTCTCATT+AGG | + | chr8_4:19005795-19005814 | None:intergenic | 35.0% |
| ! | CTTTTTCCGCAAACTGAAAA+TGG | + | chr8_4:19005862-19005881 | None:intergenic | 35.0% |
| ! | TGAGCATCGCAAAATTTGAA+AGG | + | chr8_4:19005953-19005972 | None:intergenic | 35.0% |
| !! | ATACCAAGAAAAGGCATTTC+TGG | + | chr8_4:19006136-19006155 | None:intergenic | 35.0% |
| AATGATCCATACAAGAGGTA+TGG | + | chr8_4:19006291-19006310 | None:intergenic | 35.0% | |
| TCTTGAATGATCCATACAAG+AGG | + | chr8_4:19006296-19006315 | None:intergenic | 35.0% | |
| AATGTGGAGTATATCATCTG+CGG | + | chr8_4:19006548-19006567 | None:intergenic | 35.0% | |
| ATATACTCCACATTTGATGC+CGG | - | chr8_4:19006554-19006573 | Msa1317580:intron | 35.0% | |
| AAAATTTCCGGCATCAAATG+TGG | + | chr8_4:19006564-19006583 | None:intergenic | 35.0% | |
| ! | AGATAATTTGCGCATCAGAA+TGG | - | chr8_4:19006646-19006665 | Msa1317580:intron | 35.0% |
| ! | GATAATTTGCGCATCAGAAT+GGG | - | chr8_4:19006647-19006666 | Msa1317580:intron | 35.0% |
| ! | GGCAGTCAATTTTTGTACAA+GGG | - | chr8_4:19006704-19006723 | Msa1317580:intron | 35.0% |
| !! | AATTTTTGTACAAGGGCATG+TGG | - | chr8_4:19006711-19006730 | Msa1317580:intron | 35.0% |
| AAAGGAAAATCTGCCAAAAG+TGG | + | chr8_4:19006770-19006789 | None:intergenic | 35.0% | |
| TATTCTGTTTCATCAGACGA+TGG | - | chr8_4:19006932-19006951 | Msa1317580:intron | 35.0% | |
| CAGAGCTTGAAATATCCAAA+AGG | - | chr8_4:19006957-19006976 | Msa1317580:intron | 35.0% | |
| ATGGCAGATGTTGTGATATA+TGG | - | chr8_4:19007029-19007048 | Msa1317580:CDS | 35.0% | |
| TGGCAGATGTTGTGATATAT+GGG | - | chr8_4:19007030-19007049 | Msa1317580:CDS | 35.0% | |
| AAACACTAATCCCGGTATAT+AGG | + | chr8_4:19007398-19007417 | None:intergenic | 35.0% | |
| AACAATAGCCATCATGCTAT+TGG | - | chr8_4:19007510-19007529 | Msa1317580:CDS | 35.0% | |
| !! | TGCTATTGGTCTATTTTGCT+CGG | - | chr8_4:19007524-19007543 | Msa1317580:CDS | 35.0% |
| !! | CATTAACTAGGTTGATGACA+GGG | - | chr8_4:19007717-19007736 | Msa1317580:intron | 35.0% |
| ! | GAATGGATATCTTTTCCCTA+AGG | - | chr8_4:19007741-19007760 | Msa1317580:CDS | 35.0% |
| ATGTTAGAGGTGATCTCAAA+AGG | - | chr8_4:19007790-19007809 | Msa1317580:CDS | 35.0% | |
| TGTTAGAGGTGATCTCAAAA+GGG | - | chr8_4:19007791-19007810 | Msa1317580:CDS | 35.0% | |
| AAAAGGGAAAATATCACCCT+TGG | - | chr8_4:19007807-19007826 | Msa1317580:CDS | 35.0% | |
| AAGAACTGCTAAGAACCTTA+TGG | - | chr8_4:19007855-19007874 | Msa1317580:CDS | 35.0% | |
| TGCATATCCATCAATTGCTT+CGG | + | chr8_4:19007884-19007903 | None:intergenic | 35.0% | |
| CTTTACTTCAGAACATTCTC+AGG | - | chr8_4:19007905-19007924 | Msa1317580:intron | 35.0% | |
| !! | CCACTTTTCTTTAACATGAG+GGG | + | chr8_4:19007974-19007993 | None:intergenic | 35.0% |
| !!! | GCCACTTTTCTTTAACATGA+GGG | + | chr8_4:19007975-19007994 | None:intergenic | 35.0% |
| !!! | TGCCACTTTTCTTTAACATG+AGG | + | chr8_4:19007976-19007995 | None:intergenic | 35.0% |
| ATGTTAAAGAAAAGTGGCAG+TGG | - | chr8_4:19007977-19007996 | Msa1317580:intron | 35.0% | |
| TAGATAAATACGAAGACCGT+TGG | - | chr8_4:19008064-19008083 | Msa1317580:intron | 35.0% | |
| !! | CTTTTCGAGAATGATTCCAA+CGG | + | chr8_4:19008083-19008102 | None:intergenic | 35.0% |
| AAAAAGAATAGAGGACGAAG+AGG | - | chr8_4:19008191-19008210 | Msa1317580:intron | 35.0% | |
| AATGATCAGGAGGAACATTT+AGG | - | chr8_4:19008356-19008375 | Msa1317580:intron | 35.0% | |
| CGTTTAAAAGATTAGCGTCT+CGG | - | chr8_4:19008385-19008404 | Msa1317580:intron | 35.0% | |
| ! | AACATGACTTAAGCTTTGGT+TGG | + | chr8_4:19008737-19008756 | None:intergenic | 35.0% |
| TACGGTTCATAAATGCTTAG+TGG | + | chr8_4:19008895-19008914 | None:intergenic | 35.0% | |
| CATCAAAGATCTCTTTATCG+CGG | - | chr8_4:19008943-19008962 | Msa1317580:intron | 35.0% | |
| CTAGAGTGATGTATCATTAG+AGG | + | chr8_4:19009102-19009121 | None:intergenic | 35.0% | |
| GCTTATTATCGAGATGTACT+AGG | - | chr8_4:19009219-19009238 | Msa1317580:intron | 35.0% | |
| ! | TAATGTATCCCCGTTCTTTT+TGG | + | chr8_4:19009515-19009534 | None:intergenic | 35.0% |
| ACGGGGATACATTATATTTC+TGG | - | chr8_4:19009521-19009540 | Msa1317580:intron | 35.0% | |
| CGGGGATACATTATATTTCT+GGG | - | chr8_4:19009522-19009541 | Msa1317580:intron | 35.0% | |
| ACCAAAAGTCTTTCTGTGAA+GGG | + | chr8_4:19009573-19009592 | None:intergenic | 35.0% | |
| ! | TTTTGCGATTCCATTAATGC+AGG | - | chr8_4:19009595-19009614 | Msa1317580:intron | 35.0% |
| CTCGTGAGAAACACATATAA+TGG | + | chr8_4:19009646-19009665 | None:intergenic | 35.0% | |
| ATGTGTTTCTCACGAGTATA+TGG | - | chr8_4:19009650-19009669 | Msa1317580:intron | 35.0% | |
| TATGATGAACATCATTCCAC+CGG | - | chr8_4:19010037-19010056 | Msa1317580:intron | 35.0% | |
| !! | TTTTGGCCATTTTATCCTCA+TGG | - | chr8_4:19010128-19010147 | Msa1317580:intron | 35.0% |
| TGAATTAGGCACAGAAAAGA+TGG | + | chr8_4:19010272-19010291 | None:intergenic | 35.0% | |
| ! | CTTTTCTGTGCCTAATTCAA+TGG | - | chr8_4:19010273-19010292 | Msa1317580:intron | 35.0% |
| ! | TGATCCACATTTTACCTCTA+CGG | + | chr8_4:19010696-19010715 | None:intergenic | 35.0% |
| GAGGTAAAATGTGGATCAAA+TGG | - | chr8_4:19010698-19010717 | Msa1317580:CDS | 35.0% | |
| TTACAACACACTGAAGAACA+TGG | - | chr8_4:19010726-19010745 | Msa1317580:CDS | 35.0% | |
| TTTGGCAAGGTTTATATGAG+AGG | - | chr8_4:19010824-19010843 | Msa1317580:CDS | 35.0% | |
| TTGGCAAGGTTTATATGAGA+GGG | - | chr8_4:19010825-19010844 | Msa1317580:CDS | 35.0% | |
| TTAGAGCTTTCTTCCAAATC+TGG | + | chr8_4:19010967-19010986 | None:intergenic | 35.0% | |
| ! | CTTTATTCTAGGAAATGGTG+TGG | - | chr8_4:19011211-19011230 | Msa1317580:five_prime_UTR | 35.0% |
| ! | TTATTCTAGGAAATGGTGTG+GGG | - | chr8_4:19011213-19011232 | Msa1317580:five_prime_UTR | 35.0% |
| GGGTGTGAAGATAAAAATGG+GGG | + | chr8_4:19003011-19003030 | None:intergenic | 40.0% | |
| GGGGTGTGAAGATAAAAATG+GGG | + | chr8_4:19003012-19003031 | None:intergenic | 40.0% | |
| GTGGGGTGTGAAGATAAAAA+TGG | + | chr8_4:19003014-19003033 | None:intergenic | 40.0% | |
| TGTTTCGGTTGTCGAAGATT+CGG | - | chr8_4:19003449-19003468 | Msa1317580:CDS | 40.0% | |
| CACTTTGCATCATAGTGATG+AGG | - | chr8_4:19003509-19003528 | Msa1317580:CDS | 40.0% | |
| ! | GAGGAGTATGTGTTAGACAT+TGG | - | chr8_4:19003528-19003547 | Msa1317580:CDS | 40.0% |
| GTATGTGTTAGACATTGGTG+AGG | - | chr8_4:19003533-19003552 | Msa1317580:CDS | 40.0% | |
| !!! | ATGTAGCTGTTTTTTTGCCG+AGG | - | chr8_4:19003556-19003575 | Msa1317580:CDS | 40.0% |
| GAGGATTTCGGAGAAGTTTA+AGG | - | chr8_4:19003575-19003594 | Msa1317580:intron | 40.0% | |
| TTCAATCTGTTGAACCGAAC+CGG | - | chr8_4:19003600-19003619 | Msa1317580:intron | 40.0% | |
| TCTATAACCAAATCGCTTCC+CGG | + | chr8_4:19003622-19003641 | None:intergenic | 40.0% | |
| TAGAAAACCTCAGTTGGCAT+TGG | - | chr8_4:19003638-19003657 | Msa1317580:intron | 40.0% | |
| TAAGCTCCCTAGACATACAT+AGG | + | chr8_4:19004222-19004241 | None:intergenic | 40.0% | |
| TTGTATACATGGAGCTTGTG+AGG | - | chr8_4:19004660-19004679 | Msa1317580:CDS | 40.0% | |
| GGTGGTTATATGATCAGAGA+CGG | - | chr8_4:19004877-19004896 | Msa1317580:CDS | 40.0% | |
| !! | ACAGAGAGAGCGTTGTAAAA+TGG | - | chr8_4:19004920-19004939 | Msa1317580:CDS | 40.0% |
| !! | CAGAGAGAGCGTTGTAAAAT+GGG | - | chr8_4:19004921-19004940 | Msa1317580:CDS | 40.0% |
| GCCACATCTTTGTTAGAGAT+TGG | - | chr8_4:19005175-19005194 | Msa1317580:intron | 40.0% | |
| GCCAATCTCTAACAAAGATG+TGG | + | chr8_4:19005179-19005198 | None:intergenic | 40.0% | |
| ! | AGAGATTGGCTACGATATTC+AGG | - | chr8_4:19005189-19005208 | Msa1317580:CDS | 40.0% |
| CAAGTGAAAAGACCTGCAAA+AGG | + | chr8_4:19005501-19005520 | None:intergenic | 40.0% | |
| ! | CAGGTCTTTTCACTTGAAGA+TGG | - | chr8_4:19005505-19005524 | Msa1317580:intron | 40.0% |
| ! | CTTTTCACTTGAAGATGGAC+CGG | - | chr8_4:19005510-19005529 | Msa1317580:intron | 40.0% |
| ! | TTTTCACTTGAAGATGGACC+GGG | - | chr8_4:19005511-19005530 | Msa1317580:intron | 40.0% |
| TGTCGGCAGTTAAGATTAGT+TGG | + | chr8_4:19005701-19005720 | None:intergenic | 40.0% | |
| ACTAATCTTAACTGCCGACA+CGG | - | chr8_4:19005701-19005720 | Msa1317580:intron | 40.0% | |
| TATACCATCGTAGCTGCAAA+AGG | + | chr8_4:19006094-19006113 | None:intergenic | 40.0% | |
| ! | AAGCCAGAAATGCCTTTTCT+TGG | - | chr8_4:19006130-19006149 | Msa1317580:CDS | 40.0% |
| ! | ACAAGAGGTATGGACTTGAA+AGG | + | chr8_4:19006281-19006300 | None:intergenic | 40.0% |
| TCAAGTCCATACCTCTTGTA+TGG | - | chr8_4:19006282-19006301 | Msa1317580:CDS | 40.0% | |
| ATCATTCAAGACAGTGCTCT+TGG | - | chr8_4:19006305-19006324 | Msa1317580:CDS | 40.0% | |
| TAGCGGTATATTGTCTTGAG+CGG | + | chr8_4:19006334-19006353 | None:intergenic | 40.0% | |
| TCAAGACAATATACCGCTAG+TGG | - | chr8_4:19006335-19006354 | Msa1317580:CDS | 40.0% | |
| CAAGACAATATACCGCTAGT+GGG | - | chr8_4:19006336-19006355 | Msa1317580:CDS | 40.0% | |
| AAGTTCAATCTTCCCACTAG+CGG | + | chr8_4:19006351-19006370 | None:intergenic | 40.0% | |
| GTTTGGAAAGACAACAACAG+AGG | + | chr8_4:19006405-19006424 | None:intergenic | 40.0% | |
| CTTTCCAAACTATGTCTTGC+CGG | - | chr8_4:19006415-19006434 | Msa1317580:intron | 40.0% | |
| ATTACCGGCAAGACATAGTT+TGG | + | chr8_4:19006422-19006441 | None:intergenic | 40.0% | |
| ATCGCGATAATGACATCTTC+TGG | + | chr8_4:19006680-19006699 | None:intergenic | 40.0% | |
| AGATGTCATTATCGCGATTG+TGG | - | chr8_4:19006682-19006701 | Msa1317580:intron | 40.0% | |
| GATGTCATTATCGCGATTGT+GGG | - | chr8_4:19006683-19006702 | Msa1317580:intron | 40.0% | |
| ! | GGGCAGTCAATTTTTGTACA+AGG | - | chr8_4:19006703-19006722 | Msa1317580:intron | 40.0% |
| TGACAAAGCCTGCAAAACAA+CGG | + | chr8_4:19006747-19006766 | None:intergenic | 40.0% | |
| CTACGAATCATCGTTCATAG+TGG | - | chr8_4:19006815-19006834 | Msa1317580:intron | 40.0% | |
| AAATAACTACAGTGTGGCTC+TGG | - | chr8_4:19006847-19006866 | Msa1317580:intron | 40.0% | |
| ! | ATATGCTCTATGGTCCCTTT+TGG | + | chr8_4:19006975-19006994 | None:intergenic | 40.0% |
| ATCTCCAGCTATATGCTCTA+TGG | + | chr8_4:19006985-19007004 | None:intergenic | 40.0% | |
| ! | AATTGGTTTCTCGAAGCACA+TGG | + | chr8_4:19007099-19007118 | None:intergenic | 40.0% |
| !! | GCATTAACTAGGTTGATGAC+AGG | - | chr8_4:19007716-19007735 | Msa1317580:intron | 40.0% |
| CAATTGCTTCGGATACCATA+AGG | + | chr8_4:19007873-19007892 | None:intergenic | 40.0% | |
| ATGGTATCCGAAGCAATTGA+TGG | - | chr8_4:19007874-19007893 | Msa1317580:CDS | 40.0% | |
| !! | GATATTTCTGAAACCGCCTT+AGG | + | chr8_4:19007952-19007971 | None:intergenic | 40.0% |
| CCCCTCATGTTAAAGAAAAG+TGG | - | chr8_4:19007971-19007990 | Msa1317580:intron | 40.0% | |
| GATTGTTGGGAAGAATGATC+AGG | - | chr8_4:19008343-19008362 | Msa1317580:intron | 40.0% | |
| GGATGGTGAGCTTAACTTAA+AGG | - | chr8_4:19008457-19008476 | Msa1317580:intron | 40.0% | |
| ACAGCTTATGACATCTCCAT+AGG | - | chr8_4:19008555-19008574 | Msa1317580:CDS | 40.0% | |
| GAAACGCAAAGAAAGCTGAT+AGG | - | chr8_4:19008815-19008834 | Msa1317580:intron | 40.0% | |
| GATTTACACGAAAGAGACGA+TGG | - | chr8_4:19008847-19008866 | Msa1317580:intron | 40.0% | |
| AGCATTTATGAACCGTACGT+TGG | - | chr8_4:19008898-19008917 | Msa1317580:intron | 40.0% | |
| GCATTTATGAACCGTACGTT+GGG | - | chr8_4:19008899-19008918 | Msa1317580:intron | 40.0% | |
| CATTTATGAACCGTACGTTG+GGG | - | chr8_4:19008900-19008919 | Msa1317580:intron | 40.0% | |
| TCTTTGATGTAGAAAAGGCC+AGG | + | chr8_4:19008932-19008951 | None:intergenic | 40.0% | |
| GTATTCACATGTTCACAGTC+TGG | - | chr8_4:19009132-19009151 | Msa1317580:intron | 40.0% | |
| TTAAGCAATGGAAGACGAGA+AGG | + | chr8_4:19009195-19009214 | None:intergenic | 40.0% | |
| CGAGATGTACTAGGTGAATT+TGG | - | chr8_4:19009228-19009247 | Msa1317580:intron | 40.0% | |
| AATCCTGTTTGCAATGGCAA+AGG | + | chr8_4:19009259-19009278 | None:intergenic | 40.0% | |
| ACGATCAATCCTGTTTGCAA+TGG | + | chr8_4:19009265-19009284 | None:intergenic | 40.0% | |
| ! | CTTGGATTGGATTTCAGTCT+TGG | - | chr8_4:19009298-19009317 | Msa1317580:intron | 40.0% |
| !!! | TTTTTGGTTGACGTTTTGCG+TGG | - | chr8_4:19009429-19009448 | Msa1317580:intron | 40.0% |
| !! | TTTTGGTTGACGTTTTGCGT+GGG | - | chr8_4:19009430-19009449 | Msa1317580:intron | 40.0% |
| ! | TAATGCATTTTCAGCAGCTC+TGG | + | chr8_4:19009476-19009495 | None:intergenic | 40.0% |
| GCTGTCCAATCCAAAAAGAA+CGG | - | chr8_4:19009502-19009521 | Msa1317580:intron | 40.0% | |
| CTGTCCAATCCAAAAAGAAC+GGG | - | chr8_4:19009503-19009522 | Msa1317580:intron | 40.0% | |
| TGTCCAATCCAAAAAGAACG+GGG | - | chr8_4:19009504-19009523 | Msa1317580:intron | 40.0% | |
| ! | TATCCCCGTTCTTTTTGGAT+TGG | + | chr8_4:19009510-19009529 | None:intergenic | 40.0% |
| !! | ATTATATTTCTGGGTGCGGA+TGG | - | chr8_4:19009531-19009550 | Msa1317580:intron | 40.0% |
| ! | ACCCTTCACAGAAAGACTTT+TGG | - | chr8_4:19009569-19009588 | Msa1317580:intron | 40.0% |
| GACCAAAAGTCTTTCTGTGA+AGG | + | chr8_4:19009574-19009593 | None:intergenic | 40.0% | |
| AAGCGATGAGGAGAATGTAT+GGG | - | chr8_4:19009740-19009759 | Msa1317580:intron | 40.0% | |
| TAGAGTTTGTGATGTTCTCC+AGG | - | chr8_4:19009857-19009876 | Msa1317580:intron | 40.0% | |
| TACACACCCGGTTTCATTAA+TGG | - | chr8_4:19009880-19009899 | Msa1317580:intron | 40.0% | |
| CAGAATGTTTGTAGATGCAC+TGG | - | chr8_4:19010003-19010022 | Msa1317580:intron | 40.0% | |
| GGCCAAAACCAAACAAACAA+AGG | + | chr8_4:19010116-19010135 | None:intergenic | 40.0% | |
| ! | TTGACCAGCTTTTACTTCGT+CGG | - | chr8_4:19010341-19010360 | Msa1317580:intron | 40.0% |
| TTGAGCTTCTTGTAAACGTG+TGG | - | chr8_4:19010593-19010612 | Msa1317580:CDS | 40.0% | |
| TGAGCTTCTTGTAAACGTGT+GGG | - | chr8_4:19010594-19010613 | Msa1317580:CDS | 40.0% | |
| AGCTGAGTTATCAGATTCTG+AGG | - | chr8_4:19010759-19010778 | Msa1317580:CDS | 40.0% | |
| ! | ATCCCAATAAACACTGGTTG+TGG | - | chr8_4:19010782-19010801 | Msa1317580:CDS | 40.0% |
| ! | CAAAAAACTTCACCGGTTGA+TGG | + | chr8_4:19010808-19010827 | None:intergenic | 40.0% |
| !!! | CATCAACCGGTGAAGTTTTT+TGG | - | chr8_4:19010806-19010825 | Msa1317580:CDS | 40.0% |
| ACCTTGCCAAAAAACTTCAC+CGG | + | chr8_4:19010815-19010834 | None:intergenic | 40.0% | |
| ATGAGAGGGAGAGAAGTTTA+AGG | - | chr8_4:19010839-19010858 | Msa1317580:CDS | 40.0% | |
| CGACATCGACAACAAGTAAT+CGG | - | chr8_4:19010922-19010941 | Msa1317580:five_prime_UTR | 40.0% | |
| GACATCGACAACAAGTAATC+GGG | - | chr8_4:19010923-19010942 | Msa1317580:five_prime_UTR | 40.0% | |
| ! | TATTCTAGGAAATGGTGTGG+GGG | - | chr8_4:19011214-19011233 | Msa1317580:five_prime_UTR | 40.0% |
| ATGAGCTAAACACACGGAGA+TGG | + | chr8_4:19002867-19002886 | None:intergenic | 45.0% | |
| !!! | AGAAGCACCCATTTTCACAG+AGG | - | chr8_4:19003313-19003332 | Msa1317580:CDS | 45.0% |
| GAATCTTCGACAACCGAAAC+AGG | + | chr8_4:19003450-19003469 | None:intergenic | 45.0% | |
| TCAATCTGTTGAACCGAACC+GGG | - | chr8_4:19003601-19003620 | Msa1317580:intron | 45.0% | |
| GAACTAACCAATGCCAACTG+AGG | + | chr8_4:19003648-19003667 | None:intergenic | 45.0% | |
| TTTCTCCACATATTACGGCC+CGG | + | chr8_4:19005532-19005551 | None:intergenic | 45.0% | |
| TGTCTTGCCGGTAATATGCA+CGG | - | chr8_4:19006427-19006446 | Msa1317580:intron | 45.0% | |
| ACATGTCCCGTGCATATTAC+CGG | + | chr8_4:19006437-19006456 | None:intergenic | 45.0% | |
| TGCTTCTAATGCTTCAGCAG+GGG | + | chr8_4:19006603-19006622 | None:intergenic | 45.0% | |
| CTGCTTCTAATGCTTCAGCA+GGG | + | chr8_4:19006604-19006623 | None:intergenic | 45.0% | |
| TCTGCTTCTAATGCTTCAGC+AGG | + | chr8_4:19006605-19006624 | None:intergenic | 45.0% | |
| ! | TTTGTACAAGGGCATGTGGT+TGG | - | chr8_4:19006715-19006734 | Msa1317580:intron | 45.0% |
| ! | TTGTACAAGGGCATGTGGTT+GGG | - | chr8_4:19006716-19006735 | Msa1317580:intron | 45.0% |
| TGCAGATTCTGTTCTCAGCA+TGG | - | chr8_4:19007010-19007029 | Msa1317580:CDS | 45.0% | |
| TGTGATATATGGGTCCTTGC+TGG | - | chr8_4:19007040-19007059 | Msa1317580:CDS | 45.0% | |
| !! | TAGGTTGATGACAGGGTGAA+TGG | - | chr8_4:19007724-19007743 | Msa1317580:CDS | 45.0% |
| GGAAAATATCACCCTTGGCT+CGG | - | chr8_4:19007812-19007831 | Msa1317580:CDS | 45.0% | |
| !! | ATTTCTGAAACCGCCTTAGG+AGG | + | chr8_4:19007949-19007968 | None:intergenic | 45.0% |
| TGTTGGGAAGAATGATCAGG+AGG | - | chr8_4:19008346-19008365 | Msa1317580:intron | 45.0% | |
| GATAGAACAGAGCAGTCACA+CGG | - | chr8_4:19008772-19008791 | Msa1317580:intron | 45.0% | |
| ACATGTTCACAGTCTGGCAA+AGG | - | chr8_4:19009138-19009157 | Msa1317580:intron | 45.0% | |
| GCATCAAAATCATCTCTCCC+TGG | + | chr8_4:19009171-19009190 | None:intergenic | 45.0% | |
| ! | TTTGGTTGACGTTTTGCGTG+GGG | - | chr8_4:19009431-19009450 | Msa1317580:intron | 45.0% |
| !! | GTTTTGCGTGGGGTTTTAAC+AGG | - | chr8_4:19009441-19009460 | Msa1317580:intron | 45.0% |
| TCTTTCTGTGAAGGGTTTCG+CGG | + | chr8_4:19009565-19009584 | None:intergenic | 45.0% | |
| TGCGATTCCATTAATGCAGG+AGG | - | chr8_4:19009598-19009617 | Msa1317580:intron | 45.0% | |
| CTTGCAACCTCCTGCATTAA+TGG | + | chr8_4:19009608-19009627 | None:intergenic | 45.0% | |
| GAAGCGATGAGGAGAATGTA+TGG | - | chr8_4:19009739-19009758 | Msa1317580:intron | 45.0% | |
| AGCGATGAGGAGAATGTATG+GGG | - | chr8_4:19009741-19009760 | Msa1317580:intron | 45.0% | |
| AGACCATGTGTCACCATCTA+CGG | + | chr8_4:19009800-19009819 | None:intergenic | 45.0% | |
| ATGGTCTGTCATGCTGAGTT+GGG | - | chr8_4:19009813-19009832 | Msa1317580:intron | 45.0% | |
| CAAACTCAAAGGACAGTGTC+CGG | + | chr8_4:19010059-19010078 | None:intergenic | 45.0% | |
| ! | CTGTCCTTTGAGTTTGTCGA+AGG | - | chr8_4:19010063-19010082 | Msa1317580:intron | 45.0% |
| GTCACCTTCGACAAACTCAA+AGG | + | chr8_4:19010070-19010089 | None:intergenic | 45.0% | |
| CTGAACACATGCACAGAAGA+TGG | + | chr8_4:19010249-19010268 | None:intergenic | 45.0% | |
| GGTCTCTCAGCCATTGAATT+AGG | + | chr8_4:19010286-19010305 | None:intergenic | 45.0% | |
| GAGGATGGTATTTGTGAACC+CGG | - | chr8_4:19010633-19010652 | Msa1317580:CDS | 45.0% | |
| GTATTTGTGAACCCGGAAAC+CGG | - | chr8_4:19010640-19010659 | Msa1317580:CDS | 45.0% | |
| ! | GTGTTGTTCCTGCATTACAC+CGG | + | chr8_4:19010662-19010681 | None:intergenic | 45.0% |
| AGAGCCGTAGAGGTAAAATG+TGG | - | chr8_4:19010689-19010708 | Msa1317580:CDS | 45.0% | |
| CACACTGAAGAACATGGATG+AGG | - | chr8_4:19010732-19010751 | Msa1317580:CDS | 45.0% | |
| CTGAGGATCCCAATAAACAC+TGG | - | chr8_4:19010776-19010795 | Msa1317580:CDS | 45.0% | |
| GGCCACAACCAGTGTTTATT+GGG | + | chr8_4:19010787-19010806 | None:intergenic | 45.0% | |
| TGGCCACAACCAGTGTTTAT+TGG | + | chr8_4:19010788-19010807 | None:intergenic | 45.0% | |
| !!! | ACCGGTGAAGTTTTTTGGCA+AGG | - | chr8_4:19010811-19010830 | Msa1317580:CDS | 45.0% |
| ! | GGAGAGAAGTTTAAGGCACA+AGG | - | chr8_4:19010846-19010865 | Msa1317580:CDS | 45.0% |
| GGCACAAGGAGAAAGAAAAG+AGG | - | chr8_4:19010860-19010879 | Msa1317580:CDS | 45.0% | |
| CTTTCTTCCAAATCTGGTGG+AGG | + | chr8_4:19010961-19010980 | None:intergenic | 45.0% | |
| GAGCTTTCTTCCAAATCTGG+TGG | + | chr8_4:19010964-19010983 | None:intergenic | 45.0% | |
| ! | ATTCTAGGAAATGGTGTGGG+GGG | - | chr8_4:19011215-19011234 | Msa1317580:five_prime_UTR | 45.0% |
| GAGCTGTGAAGATGCGTTCT+TGG | - | chr8_4:19003484-19003503 | Msa1317580:CDS | 50.0% | |
| AACCAAATCGCTTCCCGGTT+CGG | + | chr8_4:19003617-19003636 | None:intergenic | 50.0% | |
| ! | TGAGTCTCTACGGGTTTGCT+TGG | - | chr8_4:19003785-19003804 | Msa1317580:intron | 50.0% |
| AGACGGACAACACTGTAGAC+TGG | - | chr8_4:19005590-19005609 | Msa1317580:intron | 50.0% | |
| CGTAATACAGACAGCCGTGT+CGG | + | chr8_4:19005718-19005737 | None:intergenic | 50.0% | |
| ! | TCTGCCTTTTGCAGCTACGA+TGG | - | chr8_4:19006087-19006106 | Msa1317580:CDS | 50.0% |
| GTCTTGCCGGTAATATGCAC+GGG | - | chr8_4:19006428-19006447 | Msa1317580:intron | 50.0% | |
| !! | TTGCGCATCAGAATGGGCTA+CGG | - | chr8_4:19006653-19006672 | Msa1317580:intron | 50.0% |
| ! | TGTACAAGGGCATGTGGTTG+GGG | - | chr8_4:19006717-19006736 | Msa1317580:intron | 50.0% |
| !! | GCAGGCTTTGTCACCACTTT+TGG | - | chr8_4:19006754-19006773 | Msa1317580:intron | 50.0% |
| GATGATTCGTAGTTGCGCAC+TGG | + | chr8_4:19006807-19006826 | None:intergenic | 50.0% | |
| !! | TAACTACAGTGTGGCTCTGG+AGG | - | chr8_4:19006850-19006869 | Msa1317580:intron | 50.0% |
| GGGACCATAGAGCATATAGC+TGG | - | chr8_4:19006978-19006997 | Msa1317580:intron | 50.0% | |
| GAAAGACTGCTCTTCCAGCA+AGG | + | chr8_4:19007057-19007076 | None:intergenic | 50.0% | |
| CATTCTCAGGCTTCCATCAG+AGG | - | chr8_4:19007918-19007937 | Msa1317580:intron | 50.0% | |
| TTAGGAGGAGCAACCTCTGA+TGG | + | chr8_4:19007934-19007953 | None:intergenic | 50.0% | |
| ATCAGAGGTTGCTCCTCCTA+AGG | - | chr8_4:19007933-19007952 | Msa1317580:intron | 50.0% | |
| AGAGCAGTCACACGGAACAT+GGG | - | chr8_4:19008780-19008799 | Msa1317580:intron | 50.0% | |
| TATGAACCGTACGTTGGGGA+AGG | - | chr8_4:19008904-19008923 | Msa1317580:intron | 50.0% | |
| TCTTTATCGCGGAGTTTCCC+TGG | - | chr8_4:19008954-19008973 | Msa1317580:CDS | 50.0% | |
| CTCGCGCACAAACTTTACCA+GGG | + | chr8_4:19008974-19008993 | None:intergenic | 50.0% | |
| ACTCGCGCACAAACTTTACC+AGG | + | chr8_4:19008975-19008994 | None:intergenic | 50.0% | |
| CCTGTTTGCAATGGCAAAGG+CGG | + | chr8_4:19009256-19009275 | None:intergenic | 50.0% | |
| AGTCTTGGAGAGCAACAGCA+AGG | - | chr8_4:19009313-19009332 | Msa1317580:intron | 50.0% | |
| TTGGAGAGCAACAGCAAGGA+AGG | - | chr8_4:19009317-19009336 | Msa1317580:intron | 50.0% | |
| TTTCTGGGTGCGGATGGATA+CGG | - | chr8_4:19009537-19009556 | Msa1317580:intron | 50.0% | |
| ! | CCTCATCGCTTCTGAGAAAG+CGG | + | chr8_4:19009731-19009750 | None:intergenic | 50.0% |
| GAGGAGAATGTATGGGGTAC+AGG | - | chr8_4:19009747-19009766 | Msa1317580:intron | 50.0% | |
| GACCATGTGTCACCATCTAC+GGG | + | chr8_4:19009799-19009818 | None:intergenic | 50.0% | |
| CATGGTCTGTCATGCTGAGT+TGG | - | chr8_4:19009812-19009831 | Msa1317580:intron | 50.0% | |
| ATGTTCTCCAGGTACACACC+CGG | - | chr8_4:19009868-19009887 | Msa1317580:intron | 50.0% | |
| AATGAAACCGGGTGTGTACC+TGG | + | chr8_4:19009878-19009897 | None:intergenic | 50.0% | |
| ! | TGCACCGACGAAGTAAAAGC+TGG | + | chr8_4:19010348-19010367 | None:intergenic | 50.0% |
| ! | AGGACAAGCACTGCTACTCA+AGG | - | chr8_4:19010566-19010585 | Msa1317580:CDS | 50.0% |
| ! | GGACAAGCACTGCTACTCAA+GGG | - | chr8_4:19010567-19010586 | Msa1317580:CDS | 50.0% |
| !! | TCCTGCATTACACCGGTTTC+CGG | + | chr8_4:19010655-19010674 | None:intergenic | 50.0% |
| CACAAGTTCAAGAGCCGTAG+AGG | - | chr8_4:19010679-19010698 | Msa1317580:CDS | 50.0% | |
| TGTGAAGCCTCCACCAGATT+TGG | - | chr8_4:19010951-19010970 | Msa1317580:five_prime_UTR | 50.0% | |
| AACCGAACCGGGAAGCGATT+TGG | - | chr8_4:19003612-19003631 | Msa1317580:intron | 55.0% | |
| ATGGACCGGGCCGTAATATG+TGG | - | chr8_4:19005524-19005543 | Msa1317580:intron | 55.0% | |
| TCGCTCAGCTCTCACTGTGT+TGG | - | chr8_4:19006483-19006502 | Msa1317580:intron | 55.0% | |
| AATGCTTCAGCAGGGGAACC+AGG | + | chr8_4:19006596-19006615 | None:intergenic | 55.0% | |
| GAGGCAATGTTCCGAGCCAA+GGG | + | chr8_4:19007826-19007845 | None:intergenic | 55.0% | |
| TGAGGCAATGTTCCGAGCCA+AGG | + | chr8_4:19007827-19007846 | None:intergenic | 55.0% | |
| AGAGGTTGCTCCTCCTAAGG+CGG | - | chr8_4:19007936-19007955 | Msa1317580:intron | 55.0% | |
| CAGAGCAGTCACACGGAACA+TGG | - | chr8_4:19008779-19008798 | Msa1317580:intron | 55.0% | |
| GAGACGATGGAGAGCTTGAG+CGG | - | chr8_4:19008860-19008879 | Msa1317580:intron | 55.0% | |
| CACAGTCTGGCAAAGGTCGA+AGG | - | chr8_4:19009145-19009164 | Msa1317580:intron | 55.0% | |
| CCGCCTTTGCCATTGCAAAC+AGG | - | chr8_4:19009253-19009272 | Msa1317580:intron | 55.0% | |
| CCGCTTTCTCAGAAGCGATG+AGG | - | chr8_4:19009728-19009747 | Msa1317580:intron | 55.0% | |
| GGGCATGGGAGGCAAAGAAT+CGG | + | chr8_4:19009779-19009798 | None:intergenic | 55.0% | |
| GTGTCACCATCTACGGGCAT+GGG | + | chr8_4:19009793-19009812 | None:intergenic | 55.0% | |
| TGTGTCACCATCTACGGGCA+TGG | + | chr8_4:19009794-19009813 | None:intergenic | 55.0% | |
| TGCCCGTAGATGGTGACACA+TGG | - | chr8_4:19009794-19009813 | Msa1317580:intron | 55.0% | |
| ACTCAAAGGACAGTGTCCGG+TGG | + | chr8_4:19010056-19010075 | None:intergenic | 55.0% | |
| ATACCATCCTCCTTGCGCTG+TGG | + | chr8_4:19010624-19010643 | None:intergenic | 55.0% | |
| !! | CCTGCATTACACCGGTTTCC+GGG | + | chr8_4:19010654-19010673 | None:intergenic | 55.0% |
| ! | CACTGGTTGTGGCCATCAAC+CGG | - | chr8_4:19010793-19010812 | Msa1317580:CDS | 55.0% |
| GCAGTCACACGGAACATGGG+AGG | - | chr8_4:19008783-19008802 | Msa1317580:intron | 60.0% | |
| GATGGAGAGCTTGAGCGGAC+TGG | - | chr8_4:19008865-19008884 | Msa1317580:intron | 60.0% | |
| CAGGCTCCTTCCCCAACGTA+CGG | + | chr8_4:19008913-19008932 | None:intergenic | 60.0% | |
| TCTGGCAAAGGTCGAAGGCC+AGG | - | chr8_4:19009150-19009169 | Msa1317580:intron | 60.0% | |
| CTGGCAAAGGTCGAAGGCCA+GGG | - | chr8_4:19009151-19009170 | Msa1317580:intron | 60.0% | |
| TTGCCTCCCATGCCCGTAGA+TGG | - | chr8_4:19009784-19009803 | Msa1317580:intron | 60.0% | |
| TCACCATCTACGGGCATGGG+AGG | + | chr8_4:19009790-19009809 | None:intergenic | 60.0% | |
| CATCCTCCTTGCGCTGTGGT+AGG | + | chr8_4:19010620-19010639 | None:intergenic | 60.0% | |
| CTACCACAGCGCAAGGAGGA+TGG | - | chr8_4:19010618-19010637 | Msa1317580:CDS | 60.0% | |
| CCCGGAAACCGGTGTAATGC+AGG | - | chr8_4:19010651-19010670 | Msa1317580:CDS | 60.0% | |
| !! | GGGGCACGCCGTTGTTTTGC+AGG | - | chr8_4:19006736-19006755 | Msa1317580:intron | 65.0% |
| CGTACGTTGGGGAAGGAGCC+TGG | - | chr8_4:19008911-19008930 | Msa1317580:intron | 65.0% | |
| TGTGGGCCTACCACAGCGCA+AGG | - | chr8_4:19010611-19010630 | Msa1317580:CDS | 65.0% | |
| GGGCCTACCACAGCGCAAGG+AGG | - | chr8_4:19010614-19010633 | Msa1317580:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 19002850 | 19011309 | 19002850 | ID=Msa1317580;Name=Msa1317580 |
| chr8_4 | mRNA | 19002850 | 19011309 | 19002850 | ID=Msa1317580-mRNA-1;Parent=Msa1317580;Name=Msa1317580-mRNA-1;_AED=0.07;_eAED=0.07;_QI=405|1|1|1|1|1|14|301|1023 |
| chr8_4 | exon | 19002850 | 19003591 | 19002850 | ID=Msa1317580-mRNA-1:exon:7041;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19004075 | 19004153 | 19004075 | ID=Msa1317580-mRNA-1:exon:7040;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19004281 | 19004433 | 19004281 | ID=Msa1317580-mRNA-1:exon:7039;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19004533 | 19004696 | 19004533 | ID=Msa1317580-mRNA-1:exon:7038;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19004821 | 19005009 | 19004821 | ID=Msa1317580-mRNA-1:exon:7037;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19005184 | 19005393 | 19005184 | ID=Msa1317580-mRNA-1:exon:7036;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19005947 | 19006432 | 19005947 | ID=Msa1317580-mRNA-1:exon:7035;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19007008 | 19007211 | 19007008 | ID=Msa1317580-mRNA-1:exon:7034;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19007288 | 19007608 | 19007288 | ID=Msa1317580-mRNA-1:exon:7033;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19007723 | 19007894 | 19007723 | ID=Msa1317580-mRNA-1:exon:7032;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19008008 | 19008058 | 19008008 | ID=Msa1317580-mRNA-1:exon:7031;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19008542 | 19008651 | 19008542 | ID=Msa1317580-mRNA-1:exon:7030;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19008949 | 19009035 | 19008949 | ID=Msa1317580-mRNA-1:exon:7029;Parent=Msa1317580-mRNA-1 |
| chr8_4 | exon | 19010500 | 19011309 | 19010500 | ID=Msa1317580-mRNA-1:exon:7028;Parent=Msa1317580-mRNA-1 |
| chr8_4 | five_prime_UTR | 19010905 | 19011309 | 19010905 | ID=Msa1317580-mRNA-1:five_prime_utr;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19010500 | 19010904 | 19010500 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19008949 | 19009035 | 19008949 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19008542 | 19008651 | 19008542 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19008008 | 19008058 | 19008008 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19007723 | 19007894 | 19007723 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19007288 | 19007608 | 19007288 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19007008 | 19007211 | 19007008 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19005947 | 19006432 | 19005947 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19005184 | 19005393 | 19005184 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19004821 | 19005009 | 19004821 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19004533 | 19004696 | 19004533 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19004281 | 19004433 | 19004281 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19004075 | 19004153 | 19004075 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | CDS | 19003151 | 19003591 | 19003151 | ID=Msa1317580-mRNA-1:cds;Parent=Msa1317580-mRNA-1 |
| chr8_4 | three_prime_UTR | 19002850 | 19003150 | 19002850 | ID=Msa1317580-mRNA-1:three_prime_utr;Parent=Msa1317580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
