Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480800 | XP_013444743.1 | 97.458 | 1023 | 26 | 0 | 1 | 1023 | 1 | 1023 | 0.0 | 2069 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480800 | A0A072TPJ6 | 97.458 | 1023 | 26 | 0 | 1 | 1023 | 1 | 1023 | 0.0 | 2069 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003050 | Msa0480800 | 0.817229 | 3.674583e-52 | -8.615850e-47 |
| Msa0027390 | Msa0480800 | 0.814974 | 1.171858e-51 | -8.615850e-47 |
| Msa0032320 | Msa0480800 | 0.815845 | 7.503855e-52 | -8.615850e-47 |
| Msa0077450 | Msa0480800 | 0.805065 | 1.597904e-49 | -8.615850e-47 |
| Msa0144790 | Msa0480800 | 0.839138 | 1.895143e-57 | -8.615850e-47 |
| Msa0165300 | Msa0480800 | 0.826264 | 2.984021e-54 | -8.615850e-47 |
| Msa0191890 | Msa0480800 | 0.800690 | 1.280618e-48 | -8.615850e-47 |
| Msa0230370 | Msa0480800 | 0.809298 | 2.027964e-50 | -8.615850e-47 |
| Msa0422500 | Msa0480800 | 0.817483 | 3.221049e-52 | -8.615850e-47 |
| Msa0436370 | Msa0480800 | 0.815330 | 9.772227e-52 | -8.615850e-47 |
| Msa0450350 | Msa0480800 | 0.831396 | 1.708978e-55 | -8.615850e-47 |
| Msa0480800 | Msa0511250 | 0.817859 | 2.650627e-52 | -8.615850e-47 |
| Msa0480800 | Msa0572480 | 0.823954 | 1.048492e-53 | -8.615850e-47 |
| Msa0480800 | Msa0608200 | 0.838267 | 3.183246e-57 | -8.615850e-47 |
| Msa0480800 | Msa0626280 | 0.816830 | 4.518125e-52 | -8.615850e-47 |
| Msa0480800 | Msa0648520 | 0.809793 | 1.587378e-50 | -8.615850e-47 |
| Msa0480800 | Msa0689760 | 0.800389 | 1.474940e-48 | -8.615850e-47 |
| Msa0480800 | Msa0691050 | 0.845039 | 5.206830e-59 | -8.615850e-47 |
| Msa0480800 | Msa0716860 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0480800 | Msa0738940 | 0.807544 | 4.798670e-50 | -8.615850e-47 |
| Msa0480800 | Msa0757800 | 0.814055 | 1.871912e-51 | -8.615850e-47 |
| Msa0480800 | Msa0780280 | 0.813394 | 2.617441e-51 | -8.615850e-47 |
| Msa0480800 | Msa0794950 | 0.801763 | 7.723971e-49 | -8.615850e-47 |
| Msa0480800 | Msa0821800 | 0.811037 | 8.551888e-51 | -8.615850e-47 |
| Msa0480800 | Msa0861830 | 0.805093 | 1.576717e-49 | -8.615850e-47 |
| Msa0480800 | Msa0863800 | 0.807899 | 4.034602e-50 | -8.615850e-47 |
| Msa0480800 | Msa0929950 | 0.809736 | 1.632555e-50 | -8.615850e-47 |
| Msa0480800 | Msa1010070 | 0.821705 | 3.502474e-53 | -8.615850e-47 |
| Msa0480800 | Msa1021510 | 0.821917 | 3.129449e-53 | -8.615850e-47 |
| Msa0480800 | Msa1056460 | 0.801042 | 1.084940e-48 | -8.615850e-47 |
| Msa0480800 | Msa1105500 | 0.802880 | 4.547840e-49 | -8.615850e-47 |
| Msa0480800 | Msa1152950 | 0.824478 | 7.897206e-54 | -8.615850e-47 |
| Msa0480800 | Msa1158660 | 0.805819 | 1.110152e-49 | -8.615850e-47 |
| Msa0480800 | Msa1188720 | 0.821177 | 4.637274e-53 | -8.615850e-47 |
| Msa0480800 | Msa1227330 | 0.834340 | 3.172161e-56 | -8.615850e-47 |
| Msa0480800 | Msa1288450 | 0.815609 | 8.467895e-52 | -8.615850e-47 |
| Msa0480800 | Msa1317580 | 0.958478 | 2.133000e-116 | -8.615850e-47 |
| Msa0480800 | Msa1338130 | 0.877849 | 4.516756e-69 | -8.615850e-47 |
| Msa0480800 | Msa1379850 | 0.816438 | 5.530192e-52 | -8.615850e-47 |
| Msa0480800 | Msa1396780 | 0.819556 | 1.091408e-52 | -8.615850e-47 |
| Msa0480800 | Msa1420250 | 0.801466 | 8.887870e-49 | -8.615850e-47 |
| Msa0480800 | Msa1433220 | 0.821875 | 3.199563e-53 | -8.615850e-47 |
| Msa0480800 | Msa1435400 | 0.833470 | 5.237170e-56 | -8.615850e-47 |
| Msa0274670 | Msa0480800 | 0.805858 | 1.089376e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480800 | MtrunA17_Chr8g0348021 | 97.458 | 1023 | 26 | 0 | 1 | 1023 | 1 | 1023 | 0.0 | 2069 |
| Msa0480800 | MtrunA17_Chr1g0197621 | 40.989 | 971 | 539 | 14 | 54 | 1003 | 80 | 1037 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480800 | AT4G01210.1 | 58.293 | 1043 | 400 | 11 | 1 | 1023 | 1 | 1028 | 0.0 | 1221 |
| Msa0480800 | AT5G04480.1 | 42.588 | 904 | 488 | 13 | 121 | 1003 | 156 | 1049 | 0.0 | 723 |
| Msa0480800 | AT5G04480.2 | 42.035 | 904 | 478 | 14 | 121 | 1003 | 156 | 1034 | 0.0 | 702 |
Find 251 sgRNAs with CRISPR-Local
Find 515 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCAACCTCCTGCATTAA+TGG | 0.111874 | 3_3:-86403649 | None:intergenic |
| CTGGAATTATCTTTGCTTAA+AGG | 0.130726 | 3_3:-86400824 | None:intergenic |
| ATTAGAAGCAGATGCATTTA+TGG | 0.137762 | 3_3:+86400652 | Msa0480800:CDS |
| TGTGCAATATATTCCATATT+TGG | 0.157335 | 3_3:+86405356 | Msa0480800:three_prime_UTR |
| CAAATTCGACGTATCAAAAT+AGG | 0.189886 | 3_3:+86402064 | Msa0480800:CDS |
| ACGGGGATACATTATATTTC+TGG | 0.193517 | 3_3:+86403565 | Msa0480800:CDS |
| GATCTAAACCTCTGTGAAAA+TGG | 0.201595 | 3_3:-86397283 | None:intergenic |
| CGAGATGTACTAGGTGAATT+TGG | 0.213222 | 3_3:+86403273 | Msa0480800:CDS |
| TCCTGCATTACACCGGTTTC+CGG | 0.219473 | 3_3:-86404727 | None:intergenic |
| TGATGGGACTGTAATGTAAA+TGG | 0.222366 | 3_3:+86397198 | Msa0480800:exon |
| GAGGATTTCGGAGAAGTTTA+AGG | 0.232833 | 3_3:+86397537 | Msa0480800:CDS |
| TGGCCACAACCAGTGTTTAT+TGG | 0.251752 | 3_3:-86404860 | None:intergenic |
| GCAGGCTTTGTCACCACTTT+TGG | 0.264501 | 3_3:+86400793 | Msa0480800:CDS |
| GAAATATCAGGAGCAATAAT+TGG | 0.267581 | 3_3:-86401152 | None:intergenic |
| CCCAGATGAGAAAACTTTAA+TGG | 0.270948 | 3_3:-86397087 | None:intergenic |
| ATACCAAGAAAAGGCATTTC+TGG | 0.280408 | 3_3:-86400172 | None:intergenic |
| ATGGCAGATGTTGTGATATA+TGG | 0.295079 | 3_3:+86401068 | Msa0480800:CDS |
| GAGCTGTGAAGATGCGTTCT+TGG | 0.295118 | 3_3:+86397446 | Msa0480800:CDS |
| AGCTCCCTCTAATCCAAATA+TGG | 0.299700 | 3_3:-86405369 | None:intergenic |
| AGAGATTGGCTACGATATTC+AGG | 0.302902 | 3_3:+86399228 | Msa0480800:CDS |
| ATGAGAGGGAGAGAAGTTTA+AGG | 0.304691 | 3_3:+86404914 | Msa0480800:CDS |
| AGATAATTTGCGCATCAGTA+TGG | 0.308151 | 3_3:+86400685 | Msa0480800:CDS |
| TCAAATGTTTCTTCCTGTTT+CGG | 0.308966 | 3_3:+86397396 | Msa0480800:CDS |
| GGCCACAACCAGTGTTTATT+GGG | 0.317679 | 3_3:-86404859 | None:intergenic |
| ATTACCGGCAAGACATAGTT+TGG | 0.319997 | 3_3:-86400458 | None:intergenic |
| TGTGAAGCCTCCACCAGATT+TGG | 0.322661 | 3_3:+86405026 | Msa0480800:CDS |
| AACCGAACCGGGAAGCGATT+TGG | 0.322908 | 3_3:+86397574 | Msa0480800:CDS |
| CCAGATGAGAAAACTTTAAT+GGG | 0.323529 | 3_3:-86397086 | None:intergenic |
| TTAGAGCTTTCTTCCAAATC+TGG | 0.324471 | 3_3:-86405039 | None:intergenic |
| ATATGCTCTATGGTCCCTTT+TGG | 0.336577 | 3_3:-86401011 | None:intergenic |
| TTAAGTTTCTCCACATATTA+CGG | 0.338698 | 3_3:-86399573 | None:intergenic |
| TCCCAAAAGAATAAAATTAC+AGG | 0.341637 | 3_3:-86405254 | None:intergenic |
| CTTTCCAAACTATGTCTTGC+CGG | 0.342132 | 3_3:+86400454 | Msa0480800:CDS |
| TTCAATCTGTTGAACCGAAC+CGG | 0.349878 | 3_3:+86397562 | Msa0480800:CDS |
| AACCAAATCGCTTCCCGGTT+CGG | 0.350066 | 3_3:-86397576 | None:intergenic |
| AGTTCATGGTTTAAATTTGA+TGG | 0.351649 | 3_3:+86397181 | Msa0480800:five_prime_UTR |
| TTGTACAAGGGCATGTGGTT+GGG | 0.351751 | 3_3:+86400755 | Msa0480800:CDS |
| TTGCCTCCCATGCCCGTAGA+TGG | 0.352250 | 3_3:+86403828 | Msa0480800:CDS |
| ATGGCTTTAATCAAAATCTC+TGG | 0.352504 | 3_3:-86401116 | None:intergenic |
| ATCGCGATAATGACATCTTC+TGG | 0.354481 | 3_3:-86400716 | None:intergenic |
| GCCACATCTTTGTTAGAGAT+TGG | 0.356107 | 3_3:+86399214 | Msa0480800:CDS |
| ATTCATTTGTATATACCATA+TGG | 0.356668 | 3_3:+86402178 | Msa0480800:CDS |
| CCTGCATTACACCGGTTTCC+GGG | 0.357619 | 3_3:-86404726 | None:intergenic |
| ATATTCCATATTTGGATTAG+AGG | 0.365479 | 3_3:+86405364 | Msa0480800:three_prime_UTR |
| AGAACTCTAATGTTATCCTT+AGG | 0.366948 | 3_3:-86401802 | None:intergenic |
| AATGGAAAGAAACGAAGATT+TGG | 0.367327 | 3_3:-86396897 | None:intergenic |
| CTTGGATTGGATTTCAGTCT+TGG | 0.367794 | 3_3:+86403343 | Msa0480800:CDS |
| GCATTTATGAACCGTACGTT+GGG | 0.369771 | 3_3:+86402944 | Msa0480800:CDS |
| TCTATAACCAAATCGCTTCC+CGG | 0.371968 | 3_3:-86397581 | None:intergenic |
| ACCCTTCACAGAAAGACTTT+TGG | 0.372816 | 3_3:+86403613 | Msa0480800:CDS |
| TCAAGTCCATACCTCTTGTA+TGG | 0.377143 | 3_3:+86400321 | Msa0480800:CDS |
| ATGGTTAGGTTCTTTATTCT+AGG | 0.381140 | 3_3:+86405276 | Msa0480800:three_prime_UTR |
| GAATCTTCGACAACCGAAAC+AGG | 0.384577 | 3_3:-86397409 | None:intergenic |
| TGTACAAGGGCATGTGGTTG+GGG | 0.390090 | 3_3:+86400756 | Msa0480800:CDS |
| TCTTAGACAAATCATGTTAG+AGG | 0.390886 | 3_3:+86401822 | Msa0480800:CDS |
| GCTCGGAACATTGCCTCAAT+GGG | 0.391563 | 3_3:+86401874 | Msa0480800:CDS |
| CGACATCGACAACAAGTAAT+CGG | 0.395243 | 3_3:+86404997 | Msa0480800:CDS |
| AGGTTCTTTATTCTAGGAAA+TGG | 0.399050 | 3_3:+86405282 | Msa0480800:three_prime_UTR |
| ATTATTCAAAGCAGAAGTTC+CGG | 0.401791 | 3_3:+86405095 | Msa0480800:three_prime_UTR |
| CCGCCTTTGCCATTGCAAAC+AGG | 0.409018 | 3_3:+86403298 | Msa0480800:CDS |
| TGTGATATATGGGTCCTTGC+TGG | 0.409461 | 3_3:+86401079 | Msa0480800:CDS |
| CTTTACTTCAGAACATTCTC+AGG | 0.412356 | 3_3:+86401950 | Msa0480800:CDS |
| TTTCTGATCATAGAAATATC+AGG | 0.414616 | 3_3:-86401164 | None:intergenic |
| GGCTCGGAACATTGCCTCAA+TGG | 0.414731 | 3_3:+86401873 | Msa0480800:CDS |
| TGATTCACAACAATTGCTAA+TGG | 0.415244 | 3_3:+86399183 | Msa0480800:CDS |
| CATGGTCTGTCATGCTGAGT+TGG | 0.417197 | 3_3:+86403856 | Msa0480800:CDS |
| AGAAACTAGATTACATTCAA+TGG | 0.418151 | 3_3:+86397332 | Msa0480800:CDS |
| CACTGGTTGTGGCCATCAAC+CGG | 0.420363 | 3_3:+86404868 | Msa0480800:CDS |
| ATCTCCAGCTATATGCTCTA+TGG | 0.420929 | 3_3:-86401021 | None:intergenic |
| ATGTTAGAGGTGATCTCAAA+AGG | 0.430983 | 3_3:+86401835 | Msa0480800:CDS |
| AAATTCGACGTATCAAAATA+GGG | 0.431205 | 3_3:+86402065 | Msa0480800:CDS |
| GAACTCTAATGTTATCCTTA+GGG | 0.437658 | 3_3:-86401801 | None:intergenic |
| ATGGTCTGTCATGCTGAGTT+GGG | 0.438199 | 3_3:+86403857 | Msa0480800:CDS |
| CGGGGATACATTATATTTCT+GGG | 0.442919 | 3_3:+86403566 | Msa0480800:CDS |
| TCTGGCAAAGGTCGAAGGCC+AGG | 0.449196 | 3_3:+86403195 | Msa0480800:CDS |
| TAGAGTTTGTGATGTTCTCC+AGG | 0.452937 | 3_3:+86403901 | Msa0480800:CDS |
| AAGAACTGCTAAGAACCTTA+TGG | 0.454177 | 3_3:+86401900 | Msa0480800:CDS |
| GAGGTAAAATGTGGATCAAA+TGG | 0.454661 | 3_3:+86404773 | Msa0480800:CDS |
| AGAGATCTTTGATGTAGAAA+AGG | 0.457176 | 3_3:-86402979 | None:intergenic |
| AAATAACTACAGTGTGGCTC+TGG | 0.457212 | 3_3:+86400886 | Msa0480800:CDS |
| GATATTTCTGAAACCGCCTT+AGG | 0.462019 | 3_3:-86401994 | None:intergenic |
| ATCATTCAAGACAGTGCTCT+TGG | 0.463289 | 3_3:+86400344 | Msa0480800:CDS |
| GAGGATAATGTATGGGGTAC+AGG | 0.463610 | 3_3:+86403791 | Msa0480800:CDS |
| CGTACGTTGGGGAAGGAGCC+TGG | 0.465268 | 3_3:+86402956 | Msa0480800:CDS |
| TTTGTACAAGGGCATGTGGT+TGG | 0.465371 | 3_3:+86400754 | Msa0480800:CDS |
| TACGGTTCATAAATGCTTAG+TGG | 0.466643 | 3_3:-86402937 | None:intergenic |
| CAATTGCTTCGGATACCATA+AGG | 0.467841 | 3_3:-86401915 | None:intergenic |
| TTTATTCTAGGAAATGGTGT+GGG | 0.469299 | 3_3:+86405288 | Msa0480800:three_prime_UTR |
| TGTTTCGGTTGTCGAAGATT+CGG | 0.470780 | 3_3:+86397411 | Msa0480800:CDS |
| TGCATATCCATCAATTGCTT+CGG | 0.471101 | 3_3:-86401926 | None:intergenic |
| ATCTAAACCTCTGTGAAAAT+GGG | 0.471597 | 3_3:-86397282 | None:intergenic |
| CAGAGCAGTCACACGGAACA+TGG | 0.474531 | 3_3:+86402824 | Msa0480800:CDS |
| CTTTCTTCCAAATCTGGTGG+AGG | 0.475659 | 3_3:-86405033 | None:intergenic |
| GTATTTGTGAACCCGGAAAC+CGG | 0.478011 | 3_3:+86404715 | Msa0480800:CDS |
| ATAAATATCATACCAAGAAA+AGG | 0.478285 | 3_3:-86400181 | None:intergenic |
| TAGGTTGATGACAGGGTGAA+TGG | 0.478461 | 3_3:+86401769 | Msa0480800:intron |
| TTCATTTGTATATACCATAT+GGG | 0.478789 | 3_3:+86402179 | Msa0480800:CDS |
| TATTCCATATTTGGATTAGA+GGG | 0.479533 | 3_3:+86405365 | Msa0480800:three_prime_UTR |
| ATGGTATCCGAAGCAATTGA+TGG | 0.482150 | 3_3:+86401919 | Msa0480800:CDS |
| AGACCATGTGTCACCATCTA+CGG | 0.483630 | 3_3:-86403841 | None:intergenic |
| GTTCATGGTTTAAATTTGAT+GGG | 0.484495 | 3_3:+86397182 | Msa0480800:five_prime_UTR |
| ACCAAAAGTCTTTCTGTGAA+GGG | 0.484824 | 3_3:-86403614 | None:intergenic |
| TAGATAAATACGAAGACCGT+TGG | 0.487438 | 3_3:+86402109 | Msa0480800:CDS |
| CCCCTCATGTTAAAGAAAAG+TGG | 0.487821 | 3_3:+86402016 | Msa0480800:CDS |
| TTGAGCTTCTTGTAAACGTG+TGG | 0.491219 | 3_3:+86404668 | Msa0480800:CDS |
| TTATTCTAGGAAATGGTGTG+GGG | 0.492632 | 3_3:+86405289 | Msa0480800:three_prime_UTR |
| TCTTTATCGCGGAGTTTCCC+TGG | 0.492885 | 3_3:+86402999 | Msa0480800:CDS |
| CAGAGCTTGAAATATCCAAA+AGG | 0.493588 | 3_3:+86400996 | Msa0480800:CDS |
| GACCAAAAGTCTTTCTGTGA+AGG | 0.494411 | 3_3:-86403615 | None:intergenic |
| GCTTATTATCGAGATGTACT+AGG | 0.497421 | 3_3:+86403264 | Msa0480800:CDS |
| CCCGGAAACCGGTGTAATGC+AGG | 0.500427 | 3_3:+86404726 | Msa0480800:CDS |
| TCTTTCTGTGAAGGGTTTCG+CGG | 0.504740 | 3_3:-86403606 | None:intergenic |
| TCTGCTTCTAATGCTTCAGC+AGG | 0.505298 | 3_3:-86400641 | None:intergenic |
| ATCAGAGGTTGCTCCTCCTA+AGG | 0.505987 | 3_3:+86401978 | Msa0480800:CDS |
| TAGAAAACCTCAGTTGGCAT+TGG | 0.506230 | 3_3:+86397600 | Msa0480800:CDS |
| GAAGCGATGAGGATAATGTA+TGG | 0.506631 | 3_3:+86403783 | Msa0480800:CDS |
| AATGCTTCAGCAGGGGAACC+AGG | 0.508054 | 3_3:-86400632 | None:intergenic |
| ATTATATTTCTGGGTGCGGA+TGG | 0.509950 | 3_3:+86403575 | Msa0480800:CDS |
| TCAATCTGTTGAACCGAACC+GGG | 0.510873 | 3_3:+86397563 | Msa0480800:CDS |
| AGATGTCATTATCGCGATTG+TGG | 0.512339 | 3_3:+86400721 | Msa0480800:CDS |
| GATGGGACTGTAATGTAAAT+GGG | 0.513238 | 3_3:+86397199 | Msa0480800:exon |
| GATAATTTGCGCATCAGTAT+GGG | 0.516215 | 3_3:+86400686 | Msa0480800:CDS |
| GAAACGCAAAGAAAGCTGAT+AGG | 0.516455 | 3_3:+86402860 | Msa0480800:CDS |
| ATTCTAGGAAATGGTGTGGG+GGG | 0.516735 | 3_3:+86405291 | Msa0480800:three_prime_UTR |
| TTAGGAGGAGCAACCTCTGA+TGG | 0.520076 | 3_3:-86401976 | None:intergenic |
| GGAAAATATCACCCTTGGCT+CGG | 0.520430 | 3_3:+86401857 | Msa0480800:CDS |
| GCATTAACTAGGTTGATGAC+AGG | 0.521338 | 3_3:+86401761 | Msa0480800:intron |
| CTTTATTCTAGGAAATGGTG+TGG | 0.524244 | 3_3:+86405287 | Msa0480800:three_prime_UTR |
| TGAGGCAATGTTCCGAGCCA+AGG | 0.526932 | 3_3:-86401869 | None:intergenic |
| AATGATCCATACAAGAGGTA+TGG | 0.526952 | 3_3:-86400327 | None:intergenic |
| GATGGAGAGCTTGAGCGGAC+TGG | 0.527406 | 3_3:+86402910 | Msa0480800:CDS |
| TGGTTATAGAAAACCTCAGT+TGG | 0.528095 | 3_3:+86397594 | Msa0480800:CDS |
| CATTCTCAGGCTTCCATCAG+AGG | 0.528749 | 3_3:+86401963 | Msa0480800:CDS |
| CATCCTCCTTGCGCTGTGGT+AGG | 0.531118 | 3_3:-86404692 | None:intergenic |
| TTTCTGGGTGCGGATGGATA+CGG | 0.531157 | 3_3:+86403581 | Msa0480800:CDS |
| ATACATTATATTTCTGGGTG+CGG | 0.533401 | 3_3:+86403571 | Msa0480800:CDS |
| GACCATGTGTCACCATCTAC+GGG | 0.533729 | 3_3:-86403840 | None:intergenic |
| TGTTAGAGGTGATCTCAAAA+GGG | 0.534000 | 3_3:+86401836 | Msa0480800:CDS |
| TTGGAGAGCAACAGCAAGGA+AGG | 0.534391 | 3_3:+86403362 | Msa0480800:CDS |
| AGCAGTTCTTCTCCCCATTG+AGG | 0.534477 | 3_3:-86401887 | None:intergenic |
| CAGAATGTTTGTAGATGCAC+TGG | 0.535442 | 3_3:+86404047 | Msa0480800:intron |
| AGCTGAGTTATCAGATTCTG+AGG | 0.535762 | 3_3:+86404834 | Msa0480800:CDS |
| ATGGACCGGGCCGTAATATG+TGG | 0.536386 | 3_3:+86399563 | Msa0480800:CDS |
| CAGGCTCCTTCCCCAACGTA+CGG | 0.537128 | 3_3:-86402955 | None:intergenic |
| GATGTCATTATCGCGATTGT+GGG | 0.537242 | 3_3:+86400722 | Msa0480800:CDS |
| ATCCCAATAAACACTGGTTG+TGG | 0.537370 | 3_3:+86404857 | Msa0480800:CDS |
| GGGTTTGAAAACAAAGTAAG+TGG | 0.537599 | 3_3:-86397065 | None:intergenic |
| GACATCGACAACAAGTAATC+GGG | 0.538295 | 3_3:+86404998 | Msa0480800:CDS |
| CTGTCCTTTGAGTTTGTCGA+AGG | 0.542286 | 3_3:+86404107 | Msa0480800:CDS |
| GAGCTTTCTTCCAAATCTGG+TGG | 0.543362 | 3_3:-86405036 | None:intergenic |
| AGCATTTATGAACCGTACGT+TGG | 0.544194 | 3_3:+86402943 | Msa0480800:CDS |
| TGTGTCACCATCTACGGGCA+TGG | 0.544387 | 3_3:-86403835 | None:intergenic |
| AAAAGGGAAAATATCACCCT+TGG | 0.545228 | 3_3:+86401852 | Msa0480800:CDS |
| TTTGGCAAGGTTTATATGAG+AGG | 0.546690 | 3_3:+86404899 | Msa0480800:CDS |
| GATGATTCGTAGTTGCGCAC+TGG | 0.548354 | 3_3:-86400843 | None:intergenic |
| TGGCTTTAATCAAAATCTCT+GGG | 0.548494 | 3_3:-86401115 | None:intergenic |
| AAAATTTCCGGCATCAAATG+TGG | 0.548959 | 3_3:-86400600 | None:intergenic |
| GGGACCATAGAGCATATAGC+TGG | 0.549399 | 3_3:+86401017 | Msa0480800:CDS |
| TTGGCAAGGTTTATATGAGA+GGG | 0.550339 | 3_3:+86404900 | Msa0480800:CDS |
| TGAGCTTCTTGTAAACGTGT+GGG | 0.551828 | 3_3:+86404669 | Msa0480800:CDS |
| TAATAAGCATTGTTAAGCAA+TGG | 0.553372 | 3_3:-86403249 | None:intergenic |
| AAGCGATGAGGATAATGTAT+GGG | 0.554913 | 3_3:+86403784 | Msa0480800:CDS |
| TATGAACCGTACGTTGGGGA+AGG | 0.556112 | 3_3:+86402949 | Msa0480800:CDS |
| ATTTCTGAAACCGCCTTAGG+AGG | 0.556834 | 3_3:-86401991 | None:intergenic |
| CCCAAAAGAATAAAATTACA+GGG | 0.558219 | 3_3:-86405253 | None:intergenic |
| CAAACTCAAAGGACAGTGTC+CGG | 0.559268 | 3_3:-86404100 | None:intergenic |
| TCTTTGATGTAGAAAAGGCC+AGG | 0.561427 | 3_3:-86402974 | None:intergenic |
| TTAAACTTCTCCGAAATCCT+CGG | 0.563805 | 3_3:-86397535 | None:intergenic |
| TGGCAGATGTTGTGATATAT+GGG | 0.565269 | 3_3:+86401069 | Msa0480800:CDS |
| TCAAGACAATATACCGCTAG+TGG | 0.566079 | 3_3:+86400374 | Msa0480800:CDS |
| GGGCATGGGAGGCAAAGAAT+CGG | 0.567837 | 3_3:-86403820 | None:intergenic |
| TGCGATTCCATTAATGCAGG+AGG | 0.570143 | 3_3:+86403642 | Msa0480800:CDS |
| CACAGTCTGGCAAAGGTCGA+AGG | 0.570214 | 3_3:+86403190 | Msa0480800:intron |
| GTGTCACCATCTACGGGCAT+GGG | 0.571564 | 3_3:-86403834 | None:intergenic |
| CTGGCAAAGGTCGAAGGCCA+GGG | 0.572173 | 3_3:+86403196 | Msa0480800:CDS |
| CCTGTTTGCAATGGCAAAGG+CGG | 0.573462 | 3_3:-86403298 | None:intergenic |
| AGGACAAGCACTGCTACTCA+AGG | 0.574453 | 3_3:+86404641 | Msa0480800:intron |
| AAGATTGAAACTTTGATGTG+TGG | 0.575418 | 3_3:-86397024 | None:intergenic |
| ATGAGCTAAACACACGGAGA+TGG | 0.577891 | 3_3:-86396828 | None:intergenic |
| CTACCACAGCGCAAGGAGGA+TGG | 0.579052 | 3_3:+86404693 | Msa0480800:CDS |
| ATATACTCCACATTTGATGC+CGG | 0.579087 | 3_3:+86400593 | Msa0480800:CDS |
| CTACGAATCATCGTTCATAG+TGG | 0.580403 | 3_3:+86400854 | Msa0480800:CDS |
| AAAGGAAAATCTGCCAAAAG+TGG | 0.583261 | 3_3:-86400806 | None:intergenic |
| ATGTTAAAGAAAAGTGGCAG+TGG | 0.584460 | 3_3:+86402022 | Msa0480800:CDS |
| TATTCTAGGAAATGGTGTGG+GGG | 0.586016 | 3_3:+86405290 | Msa0480800:three_prime_UTR |
| CCTCATCGCTTCTGAGAAAG+CGG | 0.587840 | 3_3:-86403772 | None:intergenic |
| AGAAGAAAAGTATATTCAGA+AGG | 0.588194 | 3_3:+86402203 | Msa0480800:CDS |
| AGACGGACAACACTGTAGAC+TGG | 0.588612 | 3_3:+86399629 | Msa0480800:CDS |
| TTTCTCCACATATTACGGCC+CGG | 0.588929 | 3_3:-86399568 | None:intergenic |
| TGTGGGCCTACCACAGCGCA+AGG | 0.590873 | 3_3:+86404686 | Msa0480800:CDS |
| GAGGCAATGTTCCGAGCCAA+GGG | 0.592243 | 3_3:-86401868 | None:intergenic |
| AGAGCTTGAAATATCCAAAA+GGG | 0.592788 | 3_3:+86400997 | Msa0480800:CDS |
| GCATCAAAATCATCTCTCCC+TGG | 0.592807 | 3_3:-86403213 | None:intergenic |
| CACAAGTTCAAGAGCCGTAG+AGG | 0.593174 | 3_3:+86404754 | Msa0480800:CDS |
| GTGTTGTTCCTGCATTACAC+CGG | 0.593994 | 3_3:-86404734 | None:intergenic |
| ACGATCAATCCTGTTTGCAA+TGG | 0.595857 | 3_3:-86403307 | None:intergenic |
| TAACTACAGTGTGGCTCTGG+AGG | 0.598529 | 3_3:+86400889 | Msa0480800:CDS |
| TGCAGATTCTGTTCTCAGCA+TGG | 0.599563 | 3_3:+86401049 | Msa0480800:CDS |
| TCACCATCTACGGGCATGGG+AGG | 0.602080 | 3_3:-86403831 | None:intergenic |
| ACATGTTCACAGTCTGGCAA+AGG | 0.602310 | 3_3:+86403183 | Msa0480800:intron |
| AATTGGTTTCTCGAAGCACA+TGG | 0.602803 | 3_3:-86401135 | None:intergenic |
| TTACAACACACTGAAGAACA+TGG | 0.603274 | 3_3:+86404801 | Msa0480800:CDS |
| AATCCTGTTTGCAATGGCAA+AGG | 0.604520 | 3_3:-86403301 | None:intergenic |
| GGAGAGAAGTTTAAGGCACA+AGG | 0.605935 | 3_3:+86404921 | Msa0480800:CDS |
| GGCACAAGGAGAAAGAAAAG+AGG | 0.606007 | 3_3:+86404935 | Msa0480800:CDS |
| GAGACGATGGAGAGCTTGAG+CGG | 0.607041 | 3_3:+86402905 | Msa0480800:CDS |
| TTAAGCAATGGAAGACGAGA+AGG | 0.609691 | 3_3:-86403237 | None:intergenic |
| TTGCGCATCAGTATGGGCTA+CGG | 0.610502 | 3_3:+86400692 | Msa0480800:CDS |
| TATTAAAACTCGTGACAAGA+CGG | 0.610904 | 3_3:+86399612 | Msa0480800:CDS |
| GTCACCTTCGACAAACTCAA+AGG | 0.616958 | 3_3:-86404111 | None:intergenic |
| AGTCTTGGAGAGCAACAGCA+AGG | 0.617660 | 3_3:+86403358 | Msa0480800:CDS |
| CAGATGAGAAAACTTTAATG+GGG | 0.618796 | 3_3:-86397085 | None:intergenic |
| CACACTGAAGAACATGGATG+AGG | 0.619414 | 3_3:+86404807 | Msa0480800:CDS |
| CATTAACTAGGTTGATGACA+GGG | 0.620671 | 3_3:+86401762 | Msa0480800:intron |
| GAAAGACTGCTCTTCCAGCA+AGG | 0.621550 | 3_3:-86401093 | None:intergenic |
| GAGGATGGTATTTGTGAACC+CGG | 0.621629 | 3_3:+86404708 | Msa0480800:CDS |
| AGAGGTTGCTCCTCCTAAGG+CGG | 0.622561 | 3_3:+86401981 | Msa0480800:CDS |
| CTGAGGATCCCAATAAACAC+TGG | 0.623324 | 3_3:+86404851 | Msa0480800:CDS |
| CACTTTGCATCATAGTGATG+AGG | 0.624790 | 3_3:+86397471 | Msa0480800:CDS |
| ACAAGAGGTATGGACTTGAA+AGG | 0.625059 | 3_3:-86400317 | None:intergenic |
| GCCAATCTCTAACAAAGATG+TGG | 0.628553 | 3_3:-86399215 | None:intergenic |
| TGCTTCTAATGCTTCAGCAG+GGG | 0.630300 | 3_3:-86400639 | None:intergenic |
| TATGATGAACATCATTCCAC+CGG | 0.630963 | 3_3:+86404081 | Msa0480800:CDS |
| CTGCTTCTAATGCTTCAGCA+GGG | 0.632700 | 3_3:-86400640 | None:intergenic |
| GGACAAGCACTGCTACTCAA+GGG | 0.633281 | 3_3:+86404642 | Msa0480800:intron |
| CATTTATGAACCGTACGTTG+GGG | 0.634494 | 3_3:+86402945 | Msa0480800:CDS |
| CAAGACAATATACCGCTAGT+GGG | 0.637642 | 3_3:+86400375 | Msa0480800:CDS |
| GAGGAGTATGTGTTAGACAT+TGG | 0.638600 | 3_3:+86397490 | Msa0480800:CDS |
| TCTTGAATGATCCATACAAG+AGG | 0.641710 | 3_3:-86400332 | None:intergenic |
| AGAGCAGTCACACGGAACAT+GGG | 0.644057 | 3_3:+86402825 | Msa0480800:CDS |
| TGCCCGTAGATGGTGACACA+TGG | 0.646414 | 3_3:+86403838 | Msa0480800:CDS |
| AAGTTCAATCTTCCCACTAG+CGG | 0.648000 | 3_3:-86400387 | None:intergenic |
| GATTTACACGAAAGAGACGA+TGG | 0.651159 | 3_3:+86402892 | Msa0480800:CDS |
| CCGCTTTCTCAGAAGCGATG+AGG | 0.655578 | 3_3:+86403772 | Msa0480800:CDS |
| CATCAAAGATCTCTTTATCG+CGG | 0.658337 | 3_3:+86402988 | Msa0480800:CDS |
| AGAGCCGTAGAGGTAAAATG+TGG | 0.658391 | 3_3:+86404764 | Msa0480800:CDS |
| GCAGTCACACGGAACATGGG+AGG | 0.664656 | 3_3:+86402828 | Msa0480800:CDS |
| ATACCATCCTCCTTGCGCTG+TGG | 0.665035 | 3_3:-86404696 | None:intergenic |
| TAGCGGTATATTGTCTTGAG+CGG | 0.669578 | 3_3:-86400370 | None:intergenic |
| AGCGATGAGGATAATGTATG+GGG | 0.671833 | 3_3:+86403785 | Msa0480800:CDS |
| CTGTATATGAGCTAAACACA+CGG | 0.675264 | 3_3:-86396834 | None:intergenic |
| GATAGAACAGAGCAGTCACA+CGG | 0.676025 | 3_3:+86402817 | Msa0480800:CDS |
| ACTCAAAGGACAGTGTCCGG+TGG | 0.677184 | 3_3:-86404097 | None:intergenic |
| GAACTAACCAATGCCAACTG+AGG | 0.684691 | 3_3:-86397607 | None:intergenic |
| CCAAAAGAATAAAATTACAG+GGG | 0.687060 | 3_3:-86405252 | None:intergenic |
| TGACAAAGCCTGCAAAACAA+CGG | 0.688487 | 3_3:-86400783 | None:intergenic |
| CTCGGAACATTGCCTCAATG+GGG | 0.695600 | 3_3:+86401875 | Msa0480800:CDS |
| GTTTGGAAAGACAACAACAG+AGG | 0.709428 | 3_3:-86400441 | None:intergenic |
| GTATGTGTTAGACATTGGTG+AGG | 0.709592 | 3_3:+86397495 | Msa0480800:CDS |
| GGGCCTACCACAGCGCAAGG+AGG | 0.724672 | 3_3:+86404689 | Msa0480800:CDS |
| GTTAACAAATAACTACAGTG+TGG | 0.732246 | 3_3:+86400880 | Msa0480800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATTCCA+TGG | - | chr3_3:86399010-86399029 | None:intergenic | 10.0% |
| !!! | TATTATTTATGTTTTCTTTA+TGG | - | chr3_3:86404382-86404401 | None:intergenic | 10.0% |
| !!! | TTTTATAAGATCTTTCAAAT+AGG | + | chr3_3:86398456-86398475 | Msa0480800:intron | 15.0% |
| !!! | TGTTGTTATTATTACTATTA+CGG | + | chr3_3:86399487-86399506 | Msa0480800:intron | 15.0% |
| !! | GGATTATAAATAAAATTACA+AGG | - | chr3_3:86399971-86399990 | None:intergenic | 15.0% |
| !!! | CATTTTCTTTTCAAATTTTA+TGG | + | chr3_3:86400924-86400943 | Msa0480800:intron | 15.0% |
| !!! | TTTAGTTTATTTATCTGTTA+TGG | + | chr3_3:86402695-86402714 | Msa0480800:intron | 15.0% |
| !!! | ACAAATATTTTAGTTTTCTA+TGG | + | chr3_3:86404231-86404250 | Msa0480800:intron | 15.0% |
| !! | AAGATATCTACTTTAAATTA+CGG | + | chr3_3:86404291-86404310 | Msa0480800:intron | 15.0% |
| !! | TTAATTAATGTCTTAGTTAA+TGG | + | chr3_3:86404460-86404479 | Msa0480800:intron | 15.0% |
| !! | TAGAAAAATTAAATAGAATG+AGG | + | chr3_3:86404971-86404990 | Msa0480800:CDS | 15.0% |
| !! | AGAAAAAAAGAATTTATATC+CGG | - | chr3_3:86405117-86405136 | None:intergenic | 15.0% |
| !! | AAAAATCACATGCAAATAAA+GGG | - | chr3_3:86397115-86397134 | None:intergenic | 20.0% |
| !!! | ATGTGATTTTTCATTTTGTT+TGG | + | chr3_3:86397124-86397143 | Msa0480800:five_prime_UTR | 20.0% |
| !!! | ACCTTTTTTTTTTGTTTTGT+TGG | + | chr3_3:86397157-86397176 | Msa0480800:five_prime_UTR | 20.0% |
| !! | TCCAACAAAACAAAAAAAAA+AGG | - | chr3_3:86397161-86397180 | None:intergenic | 20.0% |
| !! | CTATAAATGCTTAATTAAGT+TGG | + | chr3_3:86398144-86398163 | Msa0480800:intron | 20.0% |
| !! | AACAATTTAGTTAATTGCTT+AGG | + | chr3_3:86398283-86398302 | Msa0480800:intron | 20.0% |
| !! | CAATATAAGTATTACATTCT+TGG | + | chr3_3:86398658-86398677 | Msa0480800:intron | 20.0% |
| !!! | TTTAAATTTTGTTTCAGTTG+TGG | + | chr3_3:86398694-86398713 | Msa0480800:intron | 20.0% |
| !! | AAATGTTGTATCTATAAATG+TGG | + | chr3_3:86398791-86398810 | Msa0480800:intron | 20.0% |
| !!! | ATAGTTTCAATTTCTTTTGA+AGG | + | chr3_3:86399141-86399160 | Msa0480800:intron | 20.0% |
| !!! | TATATACTTGTCTTACATTT+TGG | + | chr3_3:86399256-86399275 | Msa0480800:intron | 20.0% |
| !! | TTTGGTCTAAATATTATTTC+TGG | + | chr3_3:86399274-86399293 | Msa0480800:intron | 20.0% |
| !! | AAAAAATACTGTAAATGATG+TGG | - | chr3_3:86399445-86399464 | None:intergenic | 20.0% |
| !! | ATAAATATCATACCAAGAAA+AGG | - | chr3_3:86400184-86400203 | None:intergenic | 20.0% |
| !!! | ATAAAATCATTTGTGTTACT+TGG | - | chr3_3:86400275-86400294 | None:intergenic | 20.0% |
| !!! | ATGTCAACTAATGTTTTTAT+GGG | + | chr3_3:86400558-86400577 | Msa0480800:intron | 20.0% |
| !! | TACATTAAAAGATATAGAGT+AGG | - | chr3_3:86401201-86401220 | None:intergenic | 20.0% |
| !! | ATACTCTACGATTTATAAAA+TGG | - | chr3_3:86401297-86401316 | None:intergenic | 20.0% |
| !!! | AGTATTTTAGATTATCTCTT+AGG | + | chr3_3:86401312-86401331 | Msa0480800:intron | 20.0% |
| !!! | GTATTTTAGATTATCTCTTA+GGG | + | chr3_3:86401313-86401332 | Msa0480800:intron | 20.0% |
| !!! | TATTTATTTCCTGATTTTCT+CGG | + | chr3_3:86401407-86401426 | Msa0480800:intron | 20.0% |
| !! | TTCTTACAATAATCTAGATT+AGG | + | chr3_3:86401652-86401671 | Msa0480800:intron | 20.0% |
| !!! | GAAATTACTAACTATTTTGT+TGG | + | chr3_3:86401739-86401758 | Msa0480800:intron | 20.0% |
| !! | ATTCATTTGTATATACCATA+TGG | + | chr3_3:86402178-86402197 | Msa0480800:CDS | 20.0% |
| !! | TTCATTTGTATATACCATAT+GGG | + | chr3_3:86402179-86402198 | Msa0480800:CDS | 20.0% |
| !! | TATTACCAAAAAAAGAATAG+AGG | + | chr3_3:86402227-86402246 | Msa0480800:CDS | 20.0% |
| !! | TACTTTCTTCATTAAGTATT+AGG | - | chr3_3:86402293-86402312 | None:intergenic | 20.0% |
| !!! | ATTAATTGCTTTAGATATTG+TGG | + | chr3_3:86402325-86402344 | Msa0480800:intron | 20.0% |
| !!! | TTTTCCTATTTTTATTTGCA+AGG | + | chr3_3:86402481-86402500 | Msa0480800:intron | 20.0% |
| !!! | ATTTGTCTTCATACAATTTT+CGG | + | chr3_3:86403391-86403410 | Msa0480800:intron | 20.0% |
| !! | CAAAAAAAAAAACAAGAATG+AGG | - | chr3_3:86403459-86403478 | None:intergenic | 20.0% |
| !!! | CTCATTCTTGTTTTTTTTTT+TGG | + | chr3_3:86403457-86403476 | Msa0480800:intron | 20.0% |
| !! | ATTAAACCATGAGAATAAAA+TGG | - | chr3_3:86404181-86404200 | None:intergenic | 20.0% |
| !! | TTTCATATATTTGGATAAAG+TGG | - | chr3_3:86404616-86404635 | None:intergenic | 20.0% |
| ! | GAGTGAAAAAAGAAAGAAAA+TGG | - | chr3_3:86396918-86396937 | None:intergenic | 25.0% |
| ! | AAAATGGGAAAAAAGATTGT+GGG | - | chr3_3:86396996-86397015 | None:intergenic | 25.0% |
| ! | AAAAATGGGAAAAAAGATTG+TGG | - | chr3_3:86396997-86397016 | None:intergenic | 25.0% |
| ! | GAAAAATCACATGCAAATAA+AGG | - | chr3_3:86397116-86397135 | None:intergenic | 25.0% |
| ! | AGTTCATGGTTTAAATTTGA+TGG | + | chr3_3:86397181-86397200 | Msa0480800:five_prime_UTR | 25.0% |
| ! | GTTCATGGTTTAAATTTGAT+GGG | + | chr3_3:86397182-86397201 | Msa0480800:five_prime_UTR | 25.0% |
| !!! | ATAAACTCCCTTTTTTCAAT+GGG | - | chr3_3:86397243-86397262 | None:intergenic | 25.0% |
| !!! | AATAAACTCCCTTTTTTCAA+TGG | - | chr3_3:86397244-86397263 | None:intergenic | 25.0% |
| ! | TTGAAAAAAGGGAGTTTATT+TGG | + | chr3_3:86397244-86397263 | Msa0480800:CDS | 25.0% |
| ! | AGAAACTAGATTACATTCAA+TGG | + | chr3_3:86397332-86397351 | Msa0480800:CDS | 25.0% |
| ! | TATGCATTCTGATGAAAATT+AGG | - | chr3_3:86397634-86397653 | None:intergenic | 25.0% |
| !!! | GTGTTTGTTTAGAATGTTTT+TGG | + | chr3_3:86397666-86397685 | Msa0480800:intron | 25.0% |
| !!! | GTTTTTGGTTTGTTAATTGT+TGG | + | chr3_3:86397681-86397700 | Msa0480800:intron | 25.0% |
| ! | ATTTACTTATGTAGCATCTA+TGG | - | chr3_3:86398247-86398266 | None:intergenic | 25.0% |
| ! | ATAGATGCTACATAAGTAAA+TGG | + | chr3_3:86398246-86398265 | Msa0480800:intron | 25.0% |
| ! | TTATGAAAATCATCTGTACA+AGG | - | chr3_3:86398377-86398396 | None:intergenic | 25.0% |
| ! | GTGAAAATATAAGCTCAAAT+TGG | + | chr3_3:86398420-86398439 | Msa0480800:intron | 25.0% |
| !!! | TTTCAGTTGTGGTTTTATTA+TGG | + | chr3_3:86398705-86398724 | Msa0480800:intron | 25.0% |
| !!! | CAATTTCTTTTGAAGGTATT+TGG | + | chr3_3:86399148-86399167 | Msa0480800:intron | 25.0% |
| ! | TTAGGCAAAAGAAAAGAAAT+AGG | + | chr3_3:86399316-86399335 | Msa0480800:intron | 25.0% |
| ! | TAGGCAAAAGAAAAGAAATA+GGG | + | chr3_3:86399317-86399336 | Msa0480800:intron | 25.0% |
| ! | TTAAGTTTCTCCACATATTA+CGG | - | chr3_3:86399576-86399595 | None:intergenic | 25.0% |
| !!! | CGAGTTTTAATAATAGTGAT+GGG | - | chr3_3:86399604-86399623 | None:intergenic | 25.0% |
| !!! | ACGAGTTTTAATAATAGTGA+TGG | - | chr3_3:86399605-86399624 | None:intergenic | 25.0% |
| ! | TAATTATTCTTCTACCTGAA+TGG | + | chr3_3:86399795-86399814 | Msa0480800:intron | 25.0% |
| !! | TATTATCCATTTTCAGTTTG+CGG | + | chr3_3:86399892-86399911 | Msa0480800:intron | 25.0% |
| ! | ATTAATCCAACAAAAAGAGT+AGG | - | chr3_3:86400081-86400100 | None:intergenic | 25.0% |
| ! | TACTTGGAGAAAGAAATTAA+TGG | - | chr3_3:86400259-86400278 | None:intergenic | 25.0% |
| !!! | TATTTGTTACAGTTTTTTGC+AGG | + | chr3_3:86400292-86400311 | Msa0480800:intron | 25.0% |
| !! | AGATTGAACTTTTGAATGAT+TGG | + | chr3_3:86400399-86400418 | Msa0480800:CDS | 25.0% |
| !!! | CATGTCAACTAATGTTTTTA+TGG | + | chr3_3:86400557-86400576 | Msa0480800:intron | 25.0% |
| ! | AGGAATGACATAAAAATTTC+CGG | - | chr3_3:86400615-86400634 | None:intergenic | 25.0% |
| ! | TTTCTGATCATAGAAATATC+AGG | - | chr3_3:86401167-86401186 | None:intergenic | 25.0% |
| ! | GTATATGTATACCTATATAC+CGG | + | chr3_3:86401429-86401448 | Msa0480800:intron | 25.0% |
| ! | TATATGTATACCTATATACC+GGG | + | chr3_3:86401430-86401449 | Msa0480800:intron | 25.0% |
| !! | GTTGTGCAATTTAAGATAAA+CGG | - | chr3_3:86401532-86401551 | None:intergenic | 25.0% |
| ! | TCTTATATTAGATGTTTGCT+CGG | + | chr3_3:86401603-86401622 | Msa0480800:intron | 25.0% |
| ! | AAAGTTTCTCATATATTGTC+TGG | + | chr3_3:86401717-86401736 | Msa0480800:intron | 25.0% |
| ! | AAATTCGACGTATCAAAATA+GGG | + | chr3_3:86402065-86402084 | Msa0480800:CDS | 25.0% |
| !! | AGAAGAAAAGTATATTCAGA+AGG | + | chr3_3:86402203-86402222 | Msa0480800:CDS | 25.0% |
| ! | TTTCTTCATTAAGTATTAGG+AGG | - | chr3_3:86402290-86402309 | None:intergenic | 25.0% |
| ! | TTGTGGAACATAAAAAAATC+AGG | + | chr3_3:86402342-86402361 | Msa0480800:intron | 25.0% |
| ! | TATTAACTAGGAAGATTGTT+GGG | + | chr3_3:86402375-86402394 | Msa0480800:intron | 25.0% |
| ! | TCTAATAAGTCAATTCAAAC+AGG | - | chr3_3:86402528-86402547 | None:intergenic | 25.0% |
| ! | AAGTACTATTGAGATTGTTT+GGG | + | chr3_3:86402564-86402583 | Msa0480800:intron | 25.0% |
| !!! | TAAGATGTTTTAAGAGCTTA+CGG | - | chr3_3:86402643-86402662 | None:intergenic | 25.0% |
| ! | CATATTTGGTACAAATTGTT+TGG | + | chr3_3:86403099-86403118 | Msa0480800:intron | 25.0% |
| !! | TAATAAGCATTGTTAAGCAA+TGG | - | chr3_3:86403252-86403271 | None:intergenic | 25.0% |
| !!! | AACACATATAATGGGTTTAA+AGG | - | chr3_3:86403681-86403700 | None:intergenic | 25.0% |
| !! | AACTCTAAAAATGATCTTGT+GGG | - | chr3_3:86403888-86403907 | None:intergenic | 25.0% |
| !! | AAACTCTAAAAATGATCTTG+TGG | - | chr3_3:86403889-86403908 | None:intergenic | 25.0% |
| ! | AAGAAATCCATTAATGAAAC+CGG | - | chr3_3:86403934-86403953 | None:intergenic | 25.0% |
| !!! | CATTAATGGATTTCTTTCAT+TGG | + | chr3_3:86403938-86403957 | Msa0480800:intron | 25.0% |
| !! | ATTTGTTTCCTTTGTTTGTT+TGG | + | chr3_3:86404149-86404168 | Msa0480800:intron | 25.0% |
| ! | TCCAAATATATGAAAATTGC+AGG | + | chr3_3:86404621-86404640 | Msa0480800:intron | 25.0% |
| !! | TCCTGCAATTTTCATATATT+TGG | - | chr3_3:86404625-86404644 | None:intergenic | 25.0% |
| !! | ATTGTGATTTTCATTCAGTA+AGG | + | chr3_3:86405162-86405181 | Msa0480800:three_prime_UTR | 25.0% |
| ! | CCAAAAGAATAAAATTACAG+GGG | - | chr3_3:86405255-86405274 | None:intergenic | 25.0% |
| ! | CCCAAAAGAATAAAATTACA+GGG | - | chr3_3:86405256-86405275 | None:intergenic | 25.0% |
| !! | CCCTGTAATTTTATTCTTTT+GGG | + | chr3_3:86405253-86405272 | Msa0480800:three_prime_UTR | 25.0% |
| ! | TCCCAAAAGAATAAAATTAC+AGG | - | chr3_3:86405257-86405276 | None:intergenic | 25.0% |
| !!! | GTAATTTTATTCTTTTGGGA+TGG | + | chr3_3:86405257-86405276 | Msa0480800:three_prime_UTR | 25.0% |
| ! | TGTGCAATATATTCCATATT+TGG | + | chr3_3:86405356-86405375 | Msa0480800:three_prime_UTR | 25.0% |
| AATGGAAAGAAACGAAGATT+TGG | - | chr3_3:86396900-86396919 | None:intergenic | 30.0% | |
| AAATGGGAAAAAAGATTGTG+GGG | - | chr3_3:86396995-86397014 | None:intergenic | 30.0% | |
| TGTGTGGAATGAAGAAAAAT+GGG | - | chr3_3:86397011-86397030 | None:intergenic | 30.0% | |
| ATGTGTGGAATGAAGAAAAA+TGG | - | chr3_3:86397012-86397031 | None:intergenic | 30.0% | |
| AAGATTGAAACTTTGATGTG+TGG | - | chr3_3:86397027-86397046 | None:intergenic | 30.0% | |
| CAGATGAGAAAACTTTAATG+GGG | - | chr3_3:86397088-86397107 | None:intergenic | 30.0% | |
| CCAGATGAGAAAACTTTAAT+GGG | - | chr3_3:86397089-86397108 | None:intergenic | 30.0% | |
| ! | CCATTAAAGTTTTCTCATCT+GGG | + | chr3_3:86397087-86397106 | Msa0480800:five_prime_UTR | 30.0% |
| !!! | TTTGTTTTGTTGGAAGTTCA+TGG | + | chr3_3:86397167-86397186 | Msa0480800:five_prime_UTR | 30.0% |
| ATCTAAACCTCTGTGAAAAT+GGG | - | chr3_3:86397285-86397304 | None:intergenic | 30.0% | |
| TCAAATGTTTCTTCCTGTTT+CGG | + | chr3_3:86397396-86397415 | Msa0480800:CDS | 30.0% | |
| !! | TTGGTTTGTTAATTGTTGGT+AGG | + | chr3_3:86397685-86397704 | Msa0480800:intron | 30.0% |
| TATGTGTATTTGAGTCTCTA+TGG | + | chr3_3:86397737-86397756 | Msa0480800:intron | 30.0% | |
| ATGTGTATTTGAGTCTCTAT+GGG | + | chr3_3:86397738-86397757 | Msa0480800:intron | 30.0% | |
| TTCCATAAGCTTCAAATTGT+AGG | + | chr3_3:86397824-86397843 | Msa0480800:intron | 30.0% | |
| ! | TACCTACAATTTGAAGCTTA+TGG | - | chr3_3:86397829-86397848 | None:intergenic | 30.0% |
| ATAAGCTTCAAATTGTAGGT+AGG | + | chr3_3:86397828-86397847 | Msa0480800:intron | 30.0% | |
| TTTGAGTCTTTGAGTATGTT+TGG | + | chr3_3:86397912-86397931 | Msa0480800:intron | 30.0% | |
| ACATAAGTAAATGGTTTACG+AGG | + | chr3_3:86398255-86398274 | Msa0480800:intron | 30.0% | |
| CATAAGTAAATGGTTTACGA+GGG | + | chr3_3:86398256-86398275 | Msa0480800:intron | 30.0% | |
| !! | GTTGTTTCTACTATTGAAGA+TGG | + | chr3_3:86398328-86398347 | Msa0480800:intron | 30.0% |
| TACTATTGAAGATGGAATGA+GGG | + | chr3_3:86398336-86398355 | Msa0480800:intron | 30.0% | |
| AGAGCTCATAAATATAGCTT+CGG | - | chr3_3:86398536-86398555 | None:intergenic | 30.0% | |
| ! | TCAAATGCCTTTTGTATACA+TGG | + | chr3_3:86398611-86398630 | Msa0480800:intron | 30.0% |
| !!! | ATTATGGTTTTTGAAGTTGC+TGG | + | chr3_3:86398721-86398740 | Msa0480800:intron | 30.0% |
| !! | GCTTTGAAATTGCAGATAAA+TGG | + | chr3_3:86398746-86398765 | Msa0480800:intron | 30.0% |
| ! | TGAGCTGAAAATTTAGAACT+TGG | + | chr3_3:86398817-86398836 | Msa0480800:intron | 30.0% |
| ! | GAGCTGAAAATTTAGAACTT+GGG | + | chr3_3:86398818-86398837 | Msa0480800:intron | 30.0% |
| TATTCCATGGATCAATAACA+GGG | - | chr3_3:86398997-86399016 | None:intergenic | 30.0% | |
| ATATTCCATGGATCAATAAC+AGG | - | chr3_3:86398998-86399017 | None:intergenic | 30.0% | |
| TGATTCACAACAATTGCTAA+TGG | + | chr3_3:86399183-86399202 | Msa0480800:CDS | 30.0% | |
| !! | GGTCTAAATATTATTTCTGG+TGG | + | chr3_3:86399277-86399296 | Msa0480800:intron | 30.0% |
| ! | TTTCTTTTGCCTAAACTCAA+AGG | - | chr3_3:86399310-86399329 | None:intergenic | 30.0% |
| GAAAACATTGATCATTTAGC+AGG | - | chr3_3:86399345-86399364 | None:intergenic | 30.0% | |
| ! | TAATAATCTCTACCTTTTGC+AGG | + | chr3_3:86399525-86399544 | Msa0480800:intron | 30.0% |
| TATTAAAACTCGTGACAAGA+CGG | + | chr3_3:86399612-86399631 | Msa0480800:CDS | 30.0% | |
| GTAGAAGAATAATTACACAC+AGG | - | chr3_3:86399790-86399809 | None:intergenic | 30.0% | |
| ! | TTAAAGCTTGATTGCACTTT+TGG | - | chr3_3:86399848-86399867 | None:intergenic | 30.0% |
| TTGCGATGCTCAAAATATTA+TGG | + | chr3_3:86400000-86400019 | Msa0480800:intron | 30.0% | |
| ! | TGAAAACCTACTCTTTTTGT+TGG | + | chr3_3:86400072-86400091 | Msa0480800:intron | 30.0% |
| ! | TAATGGTACATGAAGTATTC+AGG | - | chr3_3:86400242-86400261 | None:intergenic | 30.0% |
| ! | GGAAATTTTTATGTCATTCC+TGG | + | chr3_3:86400614-86400633 | Msa0480800:CDS | 30.0% |
| ATTAGAAGCAGATGCATTTA+TGG | + | chr3_3:86400652-86400671 | Msa0480800:CDS | 30.0% | |
| CTGGAATTATCTTTGCTTAA+AGG | - | chr3_3:86400827-86400846 | None:intergenic | 30.0% | |
| GTTAACAAATAACTACAGTG+TGG | + | chr3_3:86400880-86400899 | Msa0480800:CDS | 30.0% | |
| GTCTGATGAAACAGAATATA+CGG | - | chr3_3:86400969-86400988 | None:intergenic | 30.0% | |
| AGAGCTTGAAATATCCAAAA+GGG | + | chr3_3:86400997-86401016 | Msa0480800:CDS | 30.0% | |
| !! | TGGCTTTAATCAAAATCTCT+GGG | - | chr3_3:86401118-86401137 | None:intergenic | 30.0% |
| !! | ATGGCTTTAATCAAAATCTC+TGG | - | chr3_3:86401119-86401138 | None:intergenic | 30.0% |
| GAAATATCAGGAGCAATAAT+TGG | - | chr3_3:86401155-86401174 | None:intergenic | 30.0% | |
| AGTGTCTTAGATTAATTCCT+AGG | + | chr3_3:86401270-86401289 | Msa0480800:intron | 30.0% | |
| ACGATTTATAAAATGGTCCT+AGG | - | chr3_3:86401290-86401309 | None:intergenic | 30.0% | |
| TTTAGATTATCTCTTAGGGT+TGG | + | chr3_3:86401317-86401336 | Msa0480800:intron | 30.0% | |
| ATACATATACCGAGAAAATC+AGG | - | chr3_3:86401419-86401438 | None:intergenic | 30.0% | |
| AAAAGACTAAACACTAATCC+CGG | - | chr3_3:86401451-86401470 | None:intergenic | 30.0% | |
| AAAATAGACCAATAGCATGA+TGG | - | chr3_3:86401566-86401585 | None:intergenic | 30.0% | |
| ! | CTATTTTGTTGGCATTAACT+AGG | + | chr3_3:86401750-86401769 | Msa0480800:intron | 30.0% |
| TCTTAGACAAATCATGTTAG+AGG | + | chr3_3:86401822-86401841 | Msa0480800:CDS | 30.0% | |
| !!! | CTATTTTGATACGTCGAATT+TGG | - | chr3_3:86402066-86402085 | None:intergenic | 30.0% |
| CAAATTCGACGTATCAAAAT+AGG | + | chr3_3:86402064-86402083 | Msa0480800:CDS | 30.0% | |
| ! | ATACTTTTCTTCTTCCCATA+TGG | - | chr3_3:86402196-86402215 | None:intergenic | 30.0% |
| !!! | TTCGTCCTCTATTCTTTTTT+TGG | - | chr3_3:86402235-86402254 | None:intergenic | 30.0% |
| ! | GGATTTTCTGTGTATTAACT+AGG | + | chr3_3:86402363-86402382 | Msa0480800:intron | 30.0% |
| GTATTAACTAGGAAGATTGT+TGG | + | chr3_3:86402374-86402393 | Msa0480800:intron | 30.0% | |
| CGTTTAAAAGATTAGCGTAT+CGG | + | chr3_3:86402430-86402449 | Msa0480800:intron | 30.0% | |
| CCATCCTTGCAAATAAAAAT+AGG | - | chr3_3:86402488-86402507 | None:intergenic | 30.0% | |
| !!! | CCTATTTTTATTTGCAAGGA+TGG | + | chr3_3:86402485-86402504 | Msa0480800:intron | 30.0% |
| CAAGTACTATTGAGATTGTT+TGG | + | chr3_3:86402563-86402582 | Msa0480800:intron | 30.0% | |
| AGATTGTTTGGGAGAATTTA+TGG | + | chr3_3:86402575-86402594 | Msa0480800:intron | 30.0% | |
| AATAAGCTAAAAACAGCCTA+GGG | - | chr3_3:86402619-86402638 | None:intergenic | 30.0% | |
| AAATAAGCTAAAAACAGCCT+AGG | - | chr3_3:86402620-86402639 | None:intergenic | 30.0% | |
| !! | AACATGACTTAAGCTTTGTT+TGG | - | chr3_3:86402782-86402801 | None:intergenic | 30.0% |
| AGAGATCTTTGATGTAGAAA+AGG | - | chr3_3:86402982-86403001 | None:intergenic | 30.0% | |
| AAATATGATGCTGTTGCAAA+AGG | - | chr3_3:86403086-86403105 | None:intergenic | 30.0% | |
| ! | TTTTGCAACAGCATCATATT+TGG | + | chr3_3:86403085-86403104 | Msa0480800:intron | 30.0% |
| ATCGTTTACACAAAAATGCT+TGG | + | chr3_3:86403325-86403344 | Msa0480800:CDS | 30.0% | |
| TTACACAAAAATGCTTGGAT+TGG | + | chr3_3:86403330-86403349 | Msa0480800:CDS | 30.0% | |
| !! | ATACATTATATTTCTGGGTG+CGG | + | chr3_3:86403571-86403590 | Msa0480800:CDS | 30.0% |
| TCGTGAGAAACACATATAAT+GGG | - | chr3_3:86403689-86403708 | None:intergenic | 30.0% | |
| AGAAATCCATTAATGAAACC+GGG | - | chr3_3:86403933-86403952 | None:intergenic | 30.0% | |
| !! | TTCCTTTGTTTGTTTGGTTT+TGG | + | chr3_3:86404155-86404174 | Msa0480800:intron | 30.0% |
| !! | TTTTGGCCATTTTATTCTCA+TGG | + | chr3_3:86404172-86404191 | Msa0480800:intron | 30.0% |
| AGATATCTTCGACAAACTAT+TGG | - | chr3_3:86404280-86404299 | None:intergenic | 30.0% | |
| GGTGCAAGTAAAATAATCAA+TGG | + | chr3_3:86404437-86404456 | Msa0480800:intron | 30.0% | |
| CAACTTTACTGTCAAGAATA+GGG | - | chr3_3:86404503-86404522 | None:intergenic | 30.0% | |
| ACAACTTTACTGTCAAGAAT+AGG | - | chr3_3:86404504-86404523 | None:intergenic | 30.0% | |
| ATTATTCAAAGCAGAAGTTC+CGG | + | chr3_3:86405095-86405114 | Msa0480800:three_prime_UTR | 30.0% | |
| ! | CCCCTGTAATTTTATTCTTT+TGG | + | chr3_3:86405252-86405271 | Msa0480800:three_prime_UTR | 30.0% |
| !!! | TTTATTCTTTTGGGATGGTT+AGG | + | chr3_3:86405262-86405281 | Msa0480800:three_prime_UTR | 30.0% |
| ATGGTTAGGTTCTTTATTCT+AGG | + | chr3_3:86405276-86405295 | Msa0480800:three_prime_UTR | 30.0% | |
| ! | AGGTTCTTTATTCTAGGAAA+TGG | + | chr3_3:86405282-86405301 | Msa0480800:three_prime_UTR | 30.0% |
| ! | TTTATTCTAGGAAATGGTGT+GGG | + | chr3_3:86405288-86405307 | Msa0480800:three_prime_UTR | 30.0% |
| CTGTATATGAGCTAAACACA+CGG | - | chr3_3:86396837-86396856 | None:intergenic | 35.0% | |
| ! | GAAGATTTGGCGTTGAAAAA+TGG | - | chr3_3:86396887-86396906 | None:intergenic | 35.0% |
| TGGGGTGTGAAGATAAAAAT+GGG | - | chr3_3:86396977-86396996 | None:intergenic | 35.0% | |
| GGGTTTGAAAACAAAGTAAG+TGG | - | chr3_3:86397068-86397087 | None:intergenic | 35.0% | |
| ! | CCCATTAAAGTTTTCTCATC+TGG | + | chr3_3:86397086-86397105 | Msa0480800:five_prime_UTR | 35.0% |
| CCCAGATGAGAAAACTTTAA+TGG | - | chr3_3:86397090-86397109 | None:intergenic | 35.0% | |
| TGATGGGACTGTAATGTAAA+TGG | + | chr3_3:86397198-86397217 | Msa0480800:exon | 35.0% | |
| GATGGGACTGTAATGTAAAT+GGG | + | chr3_3:86397199-86397218 | Msa0480800:exon | 35.0% | |
| TCAACGATCCCATTGAAAAA+AGG | + | chr3_3:86397232-86397251 | Msa0480800:CDS | 35.0% | |
| CAACGATCCCATTGAAAAAA+GGG | + | chr3_3:86397233-86397252 | Msa0480800:CDS | 35.0% | |
| GATCTAAACCTCTGTGAAAA+TGG | - | chr3_3:86397286-86397305 | None:intergenic | 35.0% | |
| !!! | TGTTTTTTTGCCGAGGATTT+CGG | + | chr3_3:86397525-86397544 | Msa0480800:CDS | 35.0% |
| TTAAACTTCTCCGAAATCCT+CGG | - | chr3_3:86397538-86397557 | None:intergenic | 35.0% | |
| TGGTTATAGAAAACCTCAGT+TGG | + | chr3_3:86397594-86397613 | Msa0480800:CDS | 35.0% | |
| AGAATGCATATGTTGCATGT+TGG | + | chr3_3:86397644-86397663 | Msa0480800:intron | 35.0% | |
| ! | GTTAATTGTTGGTAGGATTG+AGG | + | chr3_3:86397692-86397711 | Msa0480800:intron | 35.0% |
| ACTGAGCTAGAGTAAATTGT+AGG | + | chr3_3:86397851-86397870 | Msa0480800:intron | 35.0% | |
| AGCTAGAGTAAATTGTAGGT+AGG | + | chr3_3:86397855-86397874 | Msa0480800:intron | 35.0% | |
| CAAAGACTCAAAAACATGCT+AGG | - | chr3_3:86397904-86397923 | None:intergenic | 35.0% | |
| AGACATACATAGGACTTACT+TGG | - | chr3_3:86398174-86398193 | None:intergenic | 35.0% | |
| AGTAAGTCCTATGTATGTCT+AGG | + | chr3_3:86398174-86398193 | Msa0480800:intron | 35.0% | |
| GTAAGTCCTATGTATGTCTA+GGG | + | chr3_3:86398175-86398194 | Msa0480800:intron | 35.0% | |
| TTAGGACTCATTATAAGAGC+TGG | + | chr3_3:86398301-86398320 | Msa0480800:intron | 35.0% | |
| CTACTATTGAAGATGGAATG+AGG | + | chr3_3:86398335-86398354 | Msa0480800:intron | 35.0% | |
| !! | CATAACATATCTTCTAGAGC+TGG | + | chr3_3:86398392-86398411 | Msa0480800:intron | 35.0% |
| ! | TAAGCTCAAATTGGTCTCAT+AGG | + | chr3_3:86398429-86398448 | Msa0480800:intron | 35.0% |
| CTCATAAATATAGCTTCGGA+AGG | - | chr3_3:86398532-86398551 | None:intergenic | 35.0% | |
| ACAAGCTCCATGTATACAAA+AGG | - | chr3_3:86398621-86398640 | None:intergenic | 35.0% | |
| ! | CTGAAAATTTAGAACTTGGG+TGG | + | chr3_3:86398821-86398840 | Msa0480800:intron | 35.0% |
| ! | TTTTCCCTGTTATTGATCCA+TGG | + | chr3_3:86398990-86399009 | Msa0480800:intron | 35.0% |
| !! | GGAAAAGTACCTTTGAGTTT+AGG | + | chr3_3:86399298-86399317 | Msa0480800:intron | 35.0% |
| ATAATTACACACAGGTGTCA+AGG | - | chr3_3:86399782-86399801 | None:intergenic | 35.0% | |
| !!! | GACTTCTATTTTGACCATTC+AGG | - | chr3_3:86399812-86399831 | None:intergenic | 35.0% |
| !!! | CACTTTTGGTTCTTCTCATT+AGG | - | chr3_3:86399834-86399853 | None:intergenic | 35.0% |
| ! | CTTTTTCCGCAAACTGAAAA+TGG | - | chr3_3:86399901-86399920 | None:intergenic | 35.0% |
| ! | TGAGCATCGCAAAATTTGAA+AGG | - | chr3_3:86399992-86400011 | None:intergenic | 35.0% |
| !! | ATACCAAGAAAAGGCATTTC+TGG | - | chr3_3:86400175-86400194 | None:intergenic | 35.0% |
| AATGATCCATACAAGAGGTA+TGG | - | chr3_3:86400330-86400349 | None:intergenic | 35.0% | |
| TCTTGAATGATCCATACAAG+AGG | - | chr3_3:86400335-86400354 | None:intergenic | 35.0% | |
| AATGTGGAGTATATCATCTG+CGG | - | chr3_3:86400587-86400606 | None:intergenic | 35.0% | |
| ATATACTCCACATTTGATGC+CGG | + | chr3_3:86400593-86400612 | Msa0480800:CDS | 35.0% | |
| AAAATTTCCGGCATCAAATG+TGG | - | chr3_3:86400603-86400622 | None:intergenic | 35.0% | |
| ! | AGATAATTTGCGCATCAGTA+TGG | + | chr3_3:86400685-86400704 | Msa0480800:CDS | 35.0% |
| ! | GATAATTTGCGCATCAGTAT+GGG | + | chr3_3:86400686-86400705 | Msa0480800:CDS | 35.0% |
| ! | GGCAGTCAATTTTTGTACAA+GGG | + | chr3_3:86400743-86400762 | Msa0480800:CDS | 35.0% |
| !! | AATTTTTGTACAAGGGCATG+TGG | + | chr3_3:86400750-86400769 | Msa0480800:CDS | 35.0% |
| AAAGGAAAATCTGCCAAAAG+TGG | - | chr3_3:86400809-86400828 | None:intergenic | 35.0% | |
| TATTCTGTTTCATCAGACGA+TGG | + | chr3_3:86400971-86400990 | Msa0480800:intron | 35.0% | |
| CAGAGCTTGAAATATCCAAA+AGG | + | chr3_3:86400996-86401015 | Msa0480800:CDS | 35.0% | |
| ATGGCAGATGTTGTGATATA+TGG | + | chr3_3:86401068-86401087 | Msa0480800:CDS | 35.0% | |
| TGGCAGATGTTGTGATATAT+GGG | + | chr3_3:86401069-86401088 | Msa0480800:CDS | 35.0% | |
| AAACACTAATCCCGGTATAT+AGG | - | chr3_3:86401443-86401462 | None:intergenic | 35.0% | |
| AACAATAGCCATCATGCTAT+TGG | + | chr3_3:86401555-86401574 | Msa0480800:intron | 35.0% | |
| !! | TGCTATTGGTCTATTTTGCT+CGG | + | chr3_3:86401569-86401588 | Msa0480800:intron | 35.0% |
| !! | CATTAACTAGGTTGATGACA+GGG | + | chr3_3:86401762-86401781 | Msa0480800:intron | 35.0% |
| ! | GAATGGATATCTTTTCCCTA+AGG | + | chr3_3:86401786-86401805 | Msa0480800:CDS | 35.0% |
| ATGTTAGAGGTGATCTCAAA+AGG | + | chr3_3:86401835-86401854 | Msa0480800:CDS | 35.0% | |
| TGTTAGAGGTGATCTCAAAA+GGG | + | chr3_3:86401836-86401855 | Msa0480800:CDS | 35.0% | |
| AAAAGGGAAAATATCACCCT+TGG | + | chr3_3:86401852-86401871 | Msa0480800:CDS | 35.0% | |
| AAGAACTGCTAAGAACCTTA+TGG | + | chr3_3:86401900-86401919 | Msa0480800:CDS | 35.0% | |
| TGCATATCCATCAATTGCTT+CGG | - | chr3_3:86401929-86401948 | None:intergenic | 35.0% | |
| CTTTACTTCAGAACATTCTC+AGG | + | chr3_3:86401950-86401969 | Msa0480800:CDS | 35.0% | |
| !! | CCACTTTTCTTTAACATGAG+GGG | - | chr3_3:86402019-86402038 | None:intergenic | 35.0% |
| !!! | GCCACTTTTCTTTAACATGA+GGG | - | chr3_3:86402020-86402039 | None:intergenic | 35.0% |
| !!! | TGCCACTTTTCTTTAACATG+AGG | - | chr3_3:86402021-86402040 | None:intergenic | 35.0% |
| ATGTTAAAGAAAAGTGGCAG+TGG | + | chr3_3:86402022-86402041 | Msa0480800:CDS | 35.0% | |
| TAGATAAATACGAAGACCGT+TGG | + | chr3_3:86402109-86402128 | Msa0480800:CDS | 35.0% | |
| !! | CTTTTCGAGAATGATTCCAA+CGG | - | chr3_3:86402128-86402147 | None:intergenic | 35.0% |
| AAAAAGAATAGAGGACGAAG+AGG | + | chr3_3:86402236-86402255 | Msa0480800:CDS | 35.0% | |
| AATGATCAGGAGGAACATTT+AGG | + | chr3_3:86402401-86402420 | Msa0480800:intron | 35.0% | |
| TACGGTTCATAAATGCTTAG+TGG | - | chr3_3:86402940-86402959 | None:intergenic | 35.0% | |
| CATCAAAGATCTCTTTATCG+CGG | + | chr3_3:86402988-86403007 | Msa0480800:CDS | 35.0% | |
| CTAGAGTGATGTATCATTAG+AGG | - | chr3_3:86403147-86403166 | None:intergenic | 35.0% | |
| GCTTATTATCGAGATGTACT+AGG | + | chr3_3:86403264-86403283 | Msa0480800:CDS | 35.0% | |
| ! | TAATGTATCCCCGTTCTTTT+TGG | - | chr3_3:86403559-86403578 | None:intergenic | 35.0% |
| ACGGGGATACATTATATTTC+TGG | + | chr3_3:86403565-86403584 | Msa0480800:CDS | 35.0% | |
| CGGGGATACATTATATTTCT+GGG | + | chr3_3:86403566-86403585 | Msa0480800:CDS | 35.0% | |
| ACCAAAAGTCTTTCTGTGAA+GGG | - | chr3_3:86403617-86403636 | None:intergenic | 35.0% | |
| ! | TTTTGCGATTCCATTAATGC+AGG | + | chr3_3:86403639-86403658 | Msa0480800:CDS | 35.0% |
| CTCGTGAGAAACACATATAA+TGG | - | chr3_3:86403690-86403709 | None:intergenic | 35.0% | |
| ATGTGTTTCTCACGAGTATA+TGG | + | chr3_3:86403694-86403713 | Msa0480800:intron | 35.0% | |
| AAGCGATGAGGATAATGTAT+GGG | + | chr3_3:86403784-86403803 | Msa0480800:CDS | 35.0% | |
| TATGATGAACATCATTCCAC+CGG | + | chr3_3:86404081-86404100 | Msa0480800:CDS | 35.0% | |
| TGAATTAGGCACAGAAAAGA+TGG | - | chr3_3:86404347-86404366 | None:intergenic | 35.0% | |
| ! | CTTTTCTGTGCCTAATTCAA+TGG | + | chr3_3:86404348-86404367 | Msa0480800:intron | 35.0% |
| ! | TGATCCACATTTTACCTCTA+CGG | - | chr3_3:86404771-86404790 | None:intergenic | 35.0% |
| GAGGTAAAATGTGGATCAAA+TGG | + | chr3_3:86404773-86404792 | Msa0480800:CDS | 35.0% | |
| TTACAACACACTGAAGAACA+TGG | + | chr3_3:86404801-86404820 | Msa0480800:CDS | 35.0% | |
| TTTGGCAAGGTTTATATGAG+AGG | + | chr3_3:86404899-86404918 | Msa0480800:CDS | 35.0% | |
| TTGGCAAGGTTTATATGAGA+GGG | + | chr3_3:86404900-86404919 | Msa0480800:CDS | 35.0% | |
| TTAGAGCTTTCTTCCAAATC+TGG | - | chr3_3:86405042-86405061 | None:intergenic | 35.0% | |
| ! | CTTTATTCTAGGAAATGGTG+TGG | + | chr3_3:86405287-86405306 | Msa0480800:three_prime_UTR | 35.0% |
| ! | TTATTCTAGGAAATGGTGTG+GGG | + | chr3_3:86405289-86405308 | Msa0480800:three_prime_UTR | 35.0% |
| GGGTGTGAAGATAAAAATGG+GGG | - | chr3_3:86396975-86396994 | None:intergenic | 40.0% | |
| GGGGTGTGAAGATAAAAATG+GGG | - | chr3_3:86396976-86396995 | None:intergenic | 40.0% | |
| GTGGGGTGTGAAGATAAAAA+TGG | - | chr3_3:86396978-86396997 | None:intergenic | 40.0% | |
| TGTTTCGGTTGTCGAAGATT+CGG | + | chr3_3:86397411-86397430 | Msa0480800:CDS | 40.0% | |
| CACTTTGCATCATAGTGATG+AGG | + | chr3_3:86397471-86397490 | Msa0480800:CDS | 40.0% | |
| ! | GAGGAGTATGTGTTAGACAT+TGG | + | chr3_3:86397490-86397509 | Msa0480800:CDS | 40.0% |
| GTATGTGTTAGACATTGGTG+AGG | + | chr3_3:86397495-86397514 | Msa0480800:CDS | 40.0% | |
| !!! | ATGTAGCTGTTTTTTTGCCG+AGG | + | chr3_3:86397518-86397537 | Msa0480800:CDS | 40.0% |
| GAGGATTTCGGAGAAGTTTA+AGG | + | chr3_3:86397537-86397556 | Msa0480800:CDS | 40.0% | |
| TTCAATCTGTTGAACCGAAC+CGG | + | chr3_3:86397562-86397581 | Msa0480800:CDS | 40.0% | |
| TCTATAACCAAATCGCTTCC+CGG | - | chr3_3:86397584-86397603 | None:intergenic | 40.0% | |
| TAGAAAACCTCAGTTGGCAT+TGG | + | chr3_3:86397600-86397619 | Msa0480800:CDS | 40.0% | |
| TAAGCTCCCTAGACATACAT+AGG | - | chr3_3:86398184-86398203 | None:intergenic | 40.0% | |
| TTGTATACATGGAGCTTGTG+AGG | + | chr3_3:86398622-86398641 | Msa0480800:intron | 40.0% | |
| GGTGGTTATATGATCAGAGA+CGG | + | chr3_3:86398839-86398858 | Msa0480800:intron | 40.0% | |
| !! | ACAGAGAGAGCGTTGTAAAA+TGG | + | chr3_3:86398882-86398901 | Msa0480800:intron | 40.0% |
| !! | CAGAGAGAGCGTTGTAAAAT+GGG | + | chr3_3:86398883-86398902 | Msa0480800:intron | 40.0% |
| GCCACATCTTTGTTAGAGAT+TGG | + | chr3_3:86399214-86399233 | Msa0480800:CDS | 40.0% | |
| GCCAATCTCTAACAAAGATG+TGG | - | chr3_3:86399218-86399237 | None:intergenic | 40.0% | |
| ! | AGAGATTGGCTACGATATTC+AGG | + | chr3_3:86399228-86399247 | Msa0480800:CDS | 40.0% |
| CAAGTGAAAAGACCTGCAAA+AGG | - | chr3_3:86399540-86399559 | None:intergenic | 40.0% | |
| ! | CAGGTCTTTTCACTTGAAGA+TGG | + | chr3_3:86399544-86399563 | Msa0480800:intron | 40.0% |
| ! | CTTTTCACTTGAAGATGGAC+CGG | + | chr3_3:86399549-86399568 | Msa0480800:CDS | 40.0% |
| ! | TTTTCACTTGAAGATGGACC+GGG | + | chr3_3:86399550-86399569 | Msa0480800:CDS | 40.0% |
| TGTCGGCAGTTAAGATTAGT+TGG | - | chr3_3:86399740-86399759 | None:intergenic | 40.0% | |
| ACTAATCTTAACTGCCGACA+CGG | + | chr3_3:86399740-86399759 | Msa0480800:intron | 40.0% | |
| TATACCATCGTAGCTGCAAA+AGG | - | chr3_3:86400133-86400152 | None:intergenic | 40.0% | |
| ! | AAGCCAGAAATGCCTTTTCT+TGG | + | chr3_3:86400169-86400188 | Msa0480800:CDS | 40.0% |
| ! | ACAAGAGGTATGGACTTGAA+AGG | - | chr3_3:86400320-86400339 | None:intergenic | 40.0% |
| TCAAGTCCATACCTCTTGTA+TGG | + | chr3_3:86400321-86400340 | Msa0480800:CDS | 40.0% | |
| ATCATTCAAGACAGTGCTCT+TGG | + | chr3_3:86400344-86400363 | Msa0480800:CDS | 40.0% | |
| TAGCGGTATATTGTCTTGAG+CGG | - | chr3_3:86400373-86400392 | None:intergenic | 40.0% | |
| TCAAGACAATATACCGCTAG+TGG | + | chr3_3:86400374-86400393 | Msa0480800:CDS | 40.0% | |
| CAAGACAATATACCGCTAGT+GGG | + | chr3_3:86400375-86400394 | Msa0480800:CDS | 40.0% | |
| AAGTTCAATCTTCCCACTAG+CGG | - | chr3_3:86400390-86400409 | None:intergenic | 40.0% | |
| GTTTGGAAAGACAACAACAG+AGG | - | chr3_3:86400444-86400463 | None:intergenic | 40.0% | |
| CTTTCCAAACTATGTCTTGC+CGG | + | chr3_3:86400454-86400473 | Msa0480800:CDS | 40.0% | |
| ATTACCGGCAAGACATAGTT+TGG | - | chr3_3:86400461-86400480 | None:intergenic | 40.0% | |
| ATCGCGATAATGACATCTTC+TGG | - | chr3_3:86400719-86400738 | None:intergenic | 40.0% | |
| AGATGTCATTATCGCGATTG+TGG | + | chr3_3:86400721-86400740 | Msa0480800:CDS | 40.0% | |
| GATGTCATTATCGCGATTGT+GGG | + | chr3_3:86400722-86400741 | Msa0480800:CDS | 40.0% | |
| ! | GGGCAGTCAATTTTTGTACA+AGG | + | chr3_3:86400742-86400761 | Msa0480800:CDS | 40.0% |
| TGACAAAGCCTGCAAAACAA+CGG | - | chr3_3:86400786-86400805 | None:intergenic | 40.0% | |
| CTACGAATCATCGTTCATAG+TGG | + | chr3_3:86400854-86400873 | Msa0480800:CDS | 40.0% | |
| AAATAACTACAGTGTGGCTC+TGG | + | chr3_3:86400886-86400905 | Msa0480800:CDS | 40.0% | |
| ! | ATATGCTCTATGGTCCCTTT+TGG | - | chr3_3:86401014-86401033 | None:intergenic | 40.0% |
| ATCTCCAGCTATATGCTCTA+TGG | - | chr3_3:86401024-86401043 | None:intergenic | 40.0% | |
| ! | AATTGGTTTCTCGAAGCACA+TGG | - | chr3_3:86401138-86401157 | None:intergenic | 40.0% |
| !! | GCATTAACTAGGTTGATGAC+AGG | + | chr3_3:86401761-86401780 | Msa0480800:intron | 40.0% |
| CAATTGCTTCGGATACCATA+AGG | - | chr3_3:86401918-86401937 | None:intergenic | 40.0% | |
| ATGGTATCCGAAGCAATTGA+TGG | + | chr3_3:86401919-86401938 | Msa0480800:CDS | 40.0% | |
| !! | GATATTTCTGAAACCGCCTT+AGG | - | chr3_3:86401997-86402016 | None:intergenic | 40.0% |
| CCCCTCATGTTAAAGAAAAG+TGG | + | chr3_3:86402016-86402035 | Msa0480800:CDS | 40.0% | |
| GATTGTTGGGAAGAATGATC+AGG | + | chr3_3:86402388-86402407 | Msa0480800:intron | 40.0% | |
| GGATGGTGAGCTTAACTTAA+AGG | + | chr3_3:86402502-86402521 | Msa0480800:intron | 40.0% | |
| GAAACGCAAAGAAAGCTGAT+AGG | + | chr3_3:86402860-86402879 | Msa0480800:CDS | 40.0% | |
| GATTTACACGAAAGAGACGA+TGG | + | chr3_3:86402892-86402911 | Msa0480800:CDS | 40.0% | |
| AGCATTTATGAACCGTACGT+TGG | + | chr3_3:86402943-86402962 | Msa0480800:CDS | 40.0% | |
| GCATTTATGAACCGTACGTT+GGG | + | chr3_3:86402944-86402963 | Msa0480800:CDS | 40.0% | |
| CATTTATGAACCGTACGTTG+GGG | + | chr3_3:86402945-86402964 | Msa0480800:CDS | 40.0% | |
| TCTTTGATGTAGAAAAGGCC+AGG | - | chr3_3:86402977-86402996 | None:intergenic | 40.0% | |
| GTATTCACATGTTCACAGTC+TGG | + | chr3_3:86403177-86403196 | Msa0480800:intron | 40.0% | |
| TTAAGCAATGGAAGACGAGA+AGG | - | chr3_3:86403240-86403259 | None:intergenic | 40.0% | |
| CGAGATGTACTAGGTGAATT+TGG | + | chr3_3:86403273-86403292 | Msa0480800:CDS | 40.0% | |
| AATCCTGTTTGCAATGGCAA+AGG | - | chr3_3:86403304-86403323 | None:intergenic | 40.0% | |
| ACGATCAATCCTGTTTGCAA+TGG | - | chr3_3:86403310-86403329 | None:intergenic | 40.0% | |
| ! | CTTGGATTGGATTTCAGTCT+TGG | + | chr3_3:86403343-86403362 | Msa0480800:CDS | 40.0% |
| !!! | TTTTTGGTTGACGTTTTGCG+TGG | + | chr3_3:86403473-86403492 | Msa0480800:intron | 40.0% |
| !! | TTTTGGTTGACGTTTTGCGT+GGG | + | chr3_3:86403474-86403493 | Msa0480800:intron | 40.0% |
| ! | TAATGCATTTTCAGCAGCTC+TGG | - | chr3_3:86403520-86403539 | None:intergenic | 40.0% |
| GCTGTCCAATCCAAAAAGAA+CGG | + | chr3_3:86403546-86403565 | Msa0480800:CDS | 40.0% | |
| CTGTCCAATCCAAAAAGAAC+GGG | + | chr3_3:86403547-86403566 | Msa0480800:CDS | 40.0% | |
| TGTCCAATCCAAAAAGAACG+GGG | + | chr3_3:86403548-86403567 | Msa0480800:CDS | 40.0% | |
| ! | TATCCCCGTTCTTTTTGGAT+TGG | - | chr3_3:86403554-86403573 | None:intergenic | 40.0% |
| !! | ATTATATTTCTGGGTGCGGA+TGG | + | chr3_3:86403575-86403594 | Msa0480800:CDS | 40.0% |
| ! | ACCCTTCACAGAAAGACTTT+TGG | + | chr3_3:86403613-86403632 | Msa0480800:CDS | 40.0% |
| GACCAAAAGTCTTTCTGTGA+AGG | - | chr3_3:86403618-86403637 | None:intergenic | 40.0% | |
| GAAGCGATGAGGATAATGTA+TGG | + | chr3_3:86403783-86403802 | Msa0480800:CDS | 40.0% | |
| AGCGATGAGGATAATGTATG+GGG | + | chr3_3:86403785-86403804 | Msa0480800:CDS | 40.0% | |
| TAGAGTTTGTGATGTTCTCC+AGG | + | chr3_3:86403901-86403920 | Msa0480800:CDS | 40.0% | |
| TACACACCCGGTTTCATTAA+TGG | + | chr3_3:86403924-86403943 | Msa0480800:intron | 40.0% | |
| CAGAATGTTTGTAGATGCAC+TGG | + | chr3_3:86404047-86404066 | Msa0480800:intron | 40.0% | |
| GGCCAAAACCAAACAAACAA+AGG | - | chr3_3:86404160-86404179 | None:intergenic | 40.0% | |
| ! | TTGACCAGCTTTTACTTCGT+CGG | + | chr3_3:86404416-86404435 | Msa0480800:intron | 40.0% |
| TTGAGCTTCTTGTAAACGTG+TGG | + | chr3_3:86404668-86404687 | Msa0480800:CDS | 40.0% | |
| TGAGCTTCTTGTAAACGTGT+GGG | + | chr3_3:86404669-86404688 | Msa0480800:CDS | 40.0% | |
| AGCTGAGTTATCAGATTCTG+AGG | + | chr3_3:86404834-86404853 | Msa0480800:CDS | 40.0% | |
| ! | ATCCCAATAAACACTGGTTG+TGG | + | chr3_3:86404857-86404876 | Msa0480800:CDS | 40.0% |
| ! | CAAAAAACTTCACCGGTTGA+TGG | - | chr3_3:86404883-86404902 | None:intergenic | 40.0% |
| !!! | CATCAACCGGTGAAGTTTTT+TGG | + | chr3_3:86404881-86404900 | Msa0480800:CDS | 40.0% |
| ACCTTGCCAAAAAACTTCAC+CGG | - | chr3_3:86404890-86404909 | None:intergenic | 40.0% | |
| ATGAGAGGGAGAGAAGTTTA+AGG | + | chr3_3:86404914-86404933 | Msa0480800:CDS | 40.0% | |
| CGACATCGACAACAAGTAAT+CGG | + | chr3_3:86404997-86405016 | Msa0480800:CDS | 40.0% | |
| GACATCGACAACAAGTAATC+GGG | + | chr3_3:86404998-86405017 | Msa0480800:CDS | 40.0% | |
| ! | TATTCTAGGAAATGGTGTGG+GGG | + | chr3_3:86405290-86405309 | Msa0480800:three_prime_UTR | 40.0% |
| ATGAGCTAAACACACGGAGA+TGG | - | chr3_3:86396831-86396850 | None:intergenic | 45.0% | |
| !!! | AGAAGCACCCATTTTCACAG+AGG | + | chr3_3:86397275-86397294 | Msa0480800:CDS | 45.0% |
| GAATCTTCGACAACCGAAAC+AGG | - | chr3_3:86397412-86397431 | None:intergenic | 45.0% | |
| TCAATCTGTTGAACCGAACC+GGG | + | chr3_3:86397563-86397582 | Msa0480800:CDS | 45.0% | |
| GAACTAACCAATGCCAACTG+AGG | - | chr3_3:86397610-86397629 | None:intergenic | 45.0% | |
| ! | TGAGTCTCTATGGGTTTGCT+TGG | + | chr3_3:86397747-86397766 | Msa0480800:intron | 45.0% |
| TTTCTCCACATATTACGGCC+CGG | - | chr3_3:86399571-86399590 | None:intergenic | 45.0% | |
| GGTGTCAAGGTACGTAATAC+AGG | - | chr3_3:86399769-86399788 | None:intergenic | 45.0% | |
| TGTCTTGCCGGTAATATGCA+CGG | + | chr3_3:86400466-86400485 | Msa0480800:intron | 45.0% | |
| ACATGTCCCGTGCATATTAC+CGG | - | chr3_3:86400476-86400495 | None:intergenic | 45.0% | |
| TGCTTCTAATGCTTCAGCAG+GGG | - | chr3_3:86400642-86400661 | None:intergenic | 45.0% | |
| CTGCTTCTAATGCTTCAGCA+GGG | - | chr3_3:86400643-86400662 | None:intergenic | 45.0% | |
| TCTGCTTCTAATGCTTCAGC+AGG | - | chr3_3:86400644-86400663 | None:intergenic | 45.0% | |
| ! | TTTGTACAAGGGCATGTGGT+TGG | + | chr3_3:86400754-86400773 | Msa0480800:CDS | 45.0% |
| ! | TTGTACAAGGGCATGTGGTT+GGG | + | chr3_3:86400755-86400774 | Msa0480800:CDS | 45.0% |
| TGCAGATTCTGTTCTCAGCA+TGG | + | chr3_3:86401049-86401068 | Msa0480800:CDS | 45.0% | |
| TGTGATATATGGGTCCTTGC+TGG | + | chr3_3:86401079-86401098 | Msa0480800:CDS | 45.0% | |
| !! | TAGGTTGATGACAGGGTGAA+TGG | + | chr3_3:86401769-86401788 | Msa0480800:intron | 45.0% |
| GGAAAATATCACCCTTGGCT+CGG | + | chr3_3:86401857-86401876 | Msa0480800:CDS | 45.0% | |
| !! | ATTTCTGAAACCGCCTTAGG+AGG | - | chr3_3:86401994-86402013 | None:intergenic | 45.0% |
| TGTTGGGAAGAATGATCAGG+AGG | + | chr3_3:86402391-86402410 | Msa0480800:intron | 45.0% | |
| ACAGCTTATGACATCTCCCT+AGG | + | chr3_3:86402600-86402619 | Msa0480800:intron | 45.0% | |
| GATAGAACAGAGCAGTCACA+CGG | + | chr3_3:86402817-86402836 | Msa0480800:CDS | 45.0% | |
| ACATGTTCACAGTCTGGCAA+AGG | + | chr3_3:86403183-86403202 | Msa0480800:intron | 45.0% | |
| GCATCAAAATCATCTCTCCC+TGG | - | chr3_3:86403216-86403235 | None:intergenic | 45.0% | |
| ! | TTTGGTTGACGTTTTGCGTG+GGG | + | chr3_3:86403475-86403494 | Msa0480800:intron | 45.0% |
| !! | GTTTTGCGTGGGGTTTTAAC+AGG | + | chr3_3:86403485-86403504 | Msa0480800:intron | 45.0% |
| TCTTTCTGTGAAGGGTTTCG+CGG | - | chr3_3:86403609-86403628 | None:intergenic | 45.0% | |
| TGCGATTCCATTAATGCAGG+AGG | + | chr3_3:86403642-86403661 | Msa0480800:CDS | 45.0% | |
| CTTGCAACCTCCTGCATTAA+TGG | - | chr3_3:86403652-86403671 | None:intergenic | 45.0% | |
| GAGGATAATGTATGGGGTAC+AGG | + | chr3_3:86403791-86403810 | Msa0480800:CDS | 45.0% | |
| AGACCATGTGTCACCATCTA+CGG | - | chr3_3:86403844-86403863 | None:intergenic | 45.0% | |
| ATGGTCTGTCATGCTGAGTT+GGG | + | chr3_3:86403857-86403876 | Msa0480800:CDS | 45.0% | |
| CAAACTCAAAGGACAGTGTC+CGG | - | chr3_3:86404103-86404122 | None:intergenic | 45.0% | |
| ! | CTGTCCTTTGAGTTTGTCGA+AGG | + | chr3_3:86404107-86404126 | Msa0480800:CDS | 45.0% |
| GTCACCTTCGACAAACTCAA+AGG | - | chr3_3:86404114-86404133 | None:intergenic | 45.0% | |
| CTGAACACATGCACAGAAGA+TGG | - | chr3_3:86404324-86404343 | None:intergenic | 45.0% | |
| GGTCTCTCAGCCATTGAATT+AGG | - | chr3_3:86404361-86404380 | None:intergenic | 45.0% | |
| GAGGATGGTATTTGTGAACC+CGG | + | chr3_3:86404708-86404727 | Msa0480800:CDS | 45.0% | |
| GTATTTGTGAACCCGGAAAC+CGG | + | chr3_3:86404715-86404734 | Msa0480800:CDS | 45.0% | |
| ! | GTGTTGTTCCTGCATTACAC+CGG | - | chr3_3:86404737-86404756 | None:intergenic | 45.0% |
| AGAGCCGTAGAGGTAAAATG+TGG | + | chr3_3:86404764-86404783 | Msa0480800:CDS | 45.0% | |
| CACACTGAAGAACATGGATG+AGG | + | chr3_3:86404807-86404826 | Msa0480800:CDS | 45.0% | |
| CTGAGGATCCCAATAAACAC+TGG | + | chr3_3:86404851-86404870 | Msa0480800:CDS | 45.0% | |
| GGCCACAACCAGTGTTTATT+GGG | - | chr3_3:86404862-86404881 | None:intergenic | 45.0% | |
| TGGCCACAACCAGTGTTTAT+TGG | - | chr3_3:86404863-86404882 | None:intergenic | 45.0% | |
| !!! | ACCGGTGAAGTTTTTTGGCA+AGG | + | chr3_3:86404886-86404905 | Msa0480800:CDS | 45.0% |
| ! | GGAGAGAAGTTTAAGGCACA+AGG | + | chr3_3:86404921-86404940 | Msa0480800:CDS | 45.0% |
| GGCACAAGGAGAAAGAAAAG+AGG | + | chr3_3:86404935-86404954 | Msa0480800:CDS | 45.0% | |
| CTTTCTTCCAAATCTGGTGG+AGG | - | chr3_3:86405036-86405055 | None:intergenic | 45.0% | |
| GAGCTTTCTTCCAAATCTGG+TGG | - | chr3_3:86405039-86405058 | None:intergenic | 45.0% | |
| ! | ATTCTAGGAAATGGTGTGGG+GGG | + | chr3_3:86405291-86405310 | Msa0480800:three_prime_UTR | 45.0% |
| GAGCTGTGAAGATGCGTTCT+TGG | + | chr3_3:86397446-86397465 | Msa0480800:CDS | 50.0% | |
| AACCAAATCGCTTCCCGGTT+CGG | - | chr3_3:86397579-86397598 | None:intergenic | 50.0% | |
| AGACGGACAACACTGTAGAC+TGG | + | chr3_3:86399629-86399648 | Msa0480800:CDS | 50.0% | |
| ! | TCTGCCTTTTGCAGCTACGA+TGG | + | chr3_3:86400126-86400145 | Msa0480800:intron | 50.0% |
| GTCTTGCCGGTAATATGCAC+GGG | + | chr3_3:86400467-86400486 | Msa0480800:intron | 50.0% | |
| ! | TTGCGCATCAGTATGGGCTA+CGG | + | chr3_3:86400692-86400711 | Msa0480800:CDS | 50.0% |
| ! | TGTACAAGGGCATGTGGTTG+GGG | + | chr3_3:86400756-86400775 | Msa0480800:CDS | 50.0% |
| !! | GCAGGCTTTGTCACCACTTT+TGG | + | chr3_3:86400793-86400812 | Msa0480800:CDS | 50.0% |
| GATGATTCGTAGTTGCGCAC+TGG | - | chr3_3:86400846-86400865 | None:intergenic | 50.0% | |
| !! | TAACTACAGTGTGGCTCTGG+AGG | + | chr3_3:86400889-86400908 | Msa0480800:CDS | 50.0% |
| GGGACCATAGAGCATATAGC+TGG | + | chr3_3:86401017-86401036 | Msa0480800:CDS | 50.0% | |
| GAAAGACTGCTCTTCCAGCA+AGG | - | chr3_3:86401096-86401115 | None:intergenic | 50.0% | |
| GCTCGGAACATTGCCTCAAT+GGG | + | chr3_3:86401874-86401893 | Msa0480800:CDS | 50.0% | |
| CTCGGAACATTGCCTCAATG+GGG | + | chr3_3:86401875-86401894 | Msa0480800:CDS | 50.0% | |
| AGCAGTTCTTCTCCCCATTG+AGG | - | chr3_3:86401890-86401909 | None:intergenic | 50.0% | |
| CATTCTCAGGCTTCCATCAG+AGG | + | chr3_3:86401963-86401982 | Msa0480800:CDS | 50.0% | |
| TTAGGAGGAGCAACCTCTGA+TGG | - | chr3_3:86401979-86401998 | None:intergenic | 50.0% | |
| ATCAGAGGTTGCTCCTCCTA+AGG | + | chr3_3:86401978-86401997 | Msa0480800:CDS | 50.0% | |
| AGAGCAGTCACACGGAACAT+GGG | + | chr3_3:86402825-86402844 | Msa0480800:CDS | 50.0% | |
| TATGAACCGTACGTTGGGGA+AGG | + | chr3_3:86402949-86402968 | Msa0480800:CDS | 50.0% | |
| TCTTTATCGCGGAGTTTCCC+TGG | + | chr3_3:86402999-86403018 | Msa0480800:CDS | 50.0% | |
| CTCGCGCACAAACTTTACCA+GGG | - | chr3_3:86403019-86403038 | None:intergenic | 50.0% | |
| ACTCGCGCACAAACTTTACC+AGG | - | chr3_3:86403020-86403039 | None:intergenic | 50.0% | |
| CCTGTTTGCAATGGCAAAGG+CGG | - | chr3_3:86403301-86403320 | None:intergenic | 50.0% | |
| AGTCTTGGAGAGCAACAGCA+AGG | + | chr3_3:86403358-86403377 | Msa0480800:CDS | 50.0% | |
| TTGGAGAGCAACAGCAAGGA+AGG | + | chr3_3:86403362-86403381 | Msa0480800:CDS | 50.0% | |
| TTTCTGGGTGCGGATGGATA+CGG | + | chr3_3:86403581-86403600 | Msa0480800:CDS | 50.0% | |
| ! | CCTCATCGCTTCTGAGAAAG+CGG | - | chr3_3:86403775-86403794 | None:intergenic | 50.0% |
| GACCATGTGTCACCATCTAC+GGG | - | chr3_3:86403843-86403862 | None:intergenic | 50.0% | |
| CATGGTCTGTCATGCTGAGT+TGG | + | chr3_3:86403856-86403875 | Msa0480800:CDS | 50.0% | |
| ATGTTCTCCAGGTACACACC+CGG | + | chr3_3:86403912-86403931 | Msa0480800:intron | 50.0% | |
| AATGAAACCGGGTGTGTACC+TGG | - | chr3_3:86403922-86403941 | None:intergenic | 50.0% | |
| ! | TGCACCGACGAAGTAAAAGC+TGG | - | chr3_3:86404423-86404442 | None:intergenic | 50.0% |
| ! | AGGACAAGCACTGCTACTCA+AGG | + | chr3_3:86404641-86404660 | Msa0480800:intron | 50.0% |
| ! | GGACAAGCACTGCTACTCAA+GGG | + | chr3_3:86404642-86404661 | Msa0480800:intron | 50.0% |
| !! | TCCTGCATTACACCGGTTTC+CGG | - | chr3_3:86404730-86404749 | None:intergenic | 50.0% |
| CACAAGTTCAAGAGCCGTAG+AGG | + | chr3_3:86404754-86404773 | Msa0480800:CDS | 50.0% | |
| TGTGAAGCCTCCACCAGATT+TGG | + | chr3_3:86405026-86405045 | Msa0480800:CDS | 50.0% | |
| AACCGAACCGGGAAGCGATT+TGG | + | chr3_3:86397574-86397593 | Msa0480800:CDS | 55.0% | |
| ATGGACCGGGCCGTAATATG+TGG | + | chr3_3:86399563-86399582 | Msa0480800:CDS | 55.0% | |
| CGTAATACAGGCAGCCGTGT+CGG | - | chr3_3:86399757-86399776 | None:intergenic | 55.0% | |
| TCGCTCAGCTCTCACTGTGT+TGG | + | chr3_3:86400522-86400541 | Msa0480800:intron | 55.0% | |
| AATGCTTCAGCAGGGGAACC+AGG | - | chr3_3:86400635-86400654 | None:intergenic | 55.0% | |
| GAGGCAATGTTCCGAGCCAA+GGG | - | chr3_3:86401871-86401890 | None:intergenic | 55.0% | |
| TGAGGCAATGTTCCGAGCCA+AGG | - | chr3_3:86401872-86401891 | None:intergenic | 55.0% | |
| GGCTCGGAACATTGCCTCAA+TGG | + | chr3_3:86401873-86401892 | Msa0480800:CDS | 55.0% | |
| AGAGGTTGCTCCTCCTAAGG+CGG | + | chr3_3:86401981-86402000 | Msa0480800:CDS | 55.0% | |
| CAGAGCAGTCACACGGAACA+TGG | + | chr3_3:86402824-86402843 | Msa0480800:CDS | 55.0% | |
| GAGACGATGGAGAGCTTGAG+CGG | + | chr3_3:86402905-86402924 | Msa0480800:CDS | 55.0% | |
| CACAGTCTGGCAAAGGTCGA+AGG | + | chr3_3:86403190-86403209 | Msa0480800:intron | 55.0% | |
| CCGCCTTTGCCATTGCAAAC+AGG | + | chr3_3:86403298-86403317 | Msa0480800:CDS | 55.0% | |
| CCGCTTTCTCAGAAGCGATG+AGG | + | chr3_3:86403772-86403791 | Msa0480800:CDS | 55.0% | |
| GGGCATGGGAGGCAAAGAAT+CGG | - | chr3_3:86403823-86403842 | None:intergenic | 55.0% | |
| GTGTCACCATCTACGGGCAT+GGG | - | chr3_3:86403837-86403856 | None:intergenic | 55.0% | |
| TGTGTCACCATCTACGGGCA+TGG | - | chr3_3:86403838-86403857 | None:intergenic | 55.0% | |
| TGCCCGTAGATGGTGACACA+TGG | + | chr3_3:86403838-86403857 | Msa0480800:CDS | 55.0% | |
| ACTCAAAGGACAGTGTCCGG+TGG | - | chr3_3:86404100-86404119 | None:intergenic | 55.0% | |
| ATACCATCCTCCTTGCGCTG+TGG | - | chr3_3:86404699-86404718 | None:intergenic | 55.0% | |
| !! | CCTGCATTACACCGGTTTCC+GGG | - | chr3_3:86404729-86404748 | None:intergenic | 55.0% |
| ! | CACTGGTTGTGGCCATCAAC+CGG | + | chr3_3:86404868-86404887 | Msa0480800:CDS | 55.0% |
| GCAGTCACACGGAACATGGG+AGG | + | chr3_3:86402828-86402847 | Msa0480800:CDS | 60.0% | |
| GATGGAGAGCTTGAGCGGAC+TGG | + | chr3_3:86402910-86402929 | Msa0480800:CDS | 60.0% | |
| CAGGCTCCTTCCCCAACGTA+CGG | - | chr3_3:86402958-86402977 | None:intergenic | 60.0% | |
| TCTGGCAAAGGTCGAAGGCC+AGG | + | chr3_3:86403195-86403214 | Msa0480800:CDS | 60.0% | |
| CTGGCAAAGGTCGAAGGCCA+GGG | + | chr3_3:86403196-86403215 | Msa0480800:CDS | 60.0% | |
| TTGCCTCCCATGCCCGTAGA+TGG | + | chr3_3:86403828-86403847 | Msa0480800:CDS | 60.0% | |
| TCACCATCTACGGGCATGGG+AGG | - | chr3_3:86403834-86403853 | None:intergenic | 60.0% | |
| CATCCTCCTTGCGCTGTGGT+AGG | - | chr3_3:86404695-86404714 | None:intergenic | 60.0% | |
| CTACCACAGCGCAAGGAGGA+TGG | + | chr3_3:86404693-86404712 | Msa0480800:CDS | 60.0% | |
| CCCGGAAACCGGTGTAATGC+AGG | + | chr3_3:86404726-86404745 | Msa0480800:CDS | 60.0% | |
| !! | GGGGCACGCCGTTGTTTTGC+AGG | + | chr3_3:86400775-86400794 | Msa0480800:CDS | 65.0% |
| CGTACGTTGGGGAAGGAGCC+TGG | + | chr3_3:86402956-86402975 | Msa0480800:CDS | 65.0% | |
| TGTGGGCCTACCACAGCGCA+AGG | + | chr3_3:86404686-86404705 | Msa0480800:CDS | 65.0% | |
| GGGCCTACCACAGCGCAAGG+AGG | + | chr3_3:86404689-86404708 | Msa0480800:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 86396814 | 86405385 | 86396814 | ID=Msa0480800;Name=Msa0480800 |
| chr3_3 | mRNA | 86396814 | 86405385 | 86396814 | ID=Msa0480800-mRNA-1;Parent=Msa0480800;Name=Msa0480800-mRNA-1;_AED=0.08;_eAED=0.08;_QI=403|1|1|1|1|1|14|302|1023 |
| chr3_3 | exon | 86396814 | 86397621 | 86396814 | ID=Msa0480800-mRNA-1:exon:24911;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86399163 | 86399249 | 86399163 | ID=Msa0480800-mRNA-1:exon:24912;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86399547 | 86399656 | 86399547 | ID=Msa0480800-mRNA-1:exon:24913;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86400140 | 86400190 | 86400140 | ID=Msa0480800-mRNA-1:exon:24914;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86400304 | 86400475 | 86400304 | ID=Msa0480800-mRNA-1:exon:24915;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86400590 | 86400910 | 86400590 | ID=Msa0480800-mRNA-1:exon:24916;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86400987 | 86401190 | 86400987 | ID=Msa0480800-mRNA-1:exon:24917;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86401772 | 86402257 | 86401772 | ID=Msa0480800-mRNA-1:exon:24918;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86402811 | 86403020 | 86402811 | ID=Msa0480800-mRNA-1:exon:24919;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86403195 | 86403383 | 86403195 | ID=Msa0480800-mRNA-1:exon:24920;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86403507 | 86403670 | 86403507 | ID=Msa0480800-mRNA-1:exon:24921;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86403770 | 86403922 | 86403770 | ID=Msa0480800-mRNA-1:exon:24922;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86404050 | 86404128 | 86404050 | ID=Msa0480800-mRNA-1:exon:24923;Parent=Msa0480800-mRNA-1 |
| chr3_3 | exon | 86404643 | 86405385 | 86404643 | ID=Msa0480800-mRNA-1:exon:24924;Parent=Msa0480800-mRNA-1 |
| chr3_3 | five_prime_UTR | 86396814 | 86397216 | 86396814 | ID=Msa0480800-mRNA-1:five_prime_utr;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86397217 | 86397621 | 86397217 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86399163 | 86399249 | 86399163 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86399547 | 86399656 | 86399547 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86400140 | 86400190 | 86400140 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86400304 | 86400475 | 86400304 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86400590 | 86400910 | 86400590 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86400987 | 86401190 | 86400987 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86401772 | 86402257 | 86401772 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86402811 | 86403020 | 86402811 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86403195 | 86403383 | 86403195 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86403507 | 86403670 | 86403507 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86403770 | 86403922 | 86403770 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86404050 | 86404128 | 86404050 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | CDS | 86404643 | 86405083 | 86404643 | ID=Msa0480800-mRNA-1:cds;Parent=Msa0480800-mRNA-1 |
| chr3_3 | three_prime_UTR | 86405084 | 86405385 | 86405084 | ID=Msa0480800-mRNA-1:three_prime_utr;Parent=Msa0480800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
