Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040160 | XP_003626150.1 | 99.034 | 207 | 2 | 0 | 1 | 207 | 1 | 207 | 2.28e-147 | 418 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040160 | sp|P41129|RL132_BRANA | 85.922 | 206 | 29 | 0 | 2 | 207 | 1 | 206 | 3.23e-131 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040160 | G7KWF6 | 99.034 | 207 | 2 | 0 | 1 | 207 | 1 | 207 | 1.09e-147 | 418 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1040160 | 0.828333 | 9.527480e-55 | -8.615850e-47 |
| Msa0003330 | Msa1040160 | 0.807163 | 5.779763e-50 | -8.615850e-47 |
| Msa0003360 | Msa1040160 | 0.803377 | 3.588309e-49 | -8.615850e-47 |
| Msa0016350 | Msa1040160 | 0.817091 | 3.946526e-52 | -8.615850e-47 |
| Msa0021290 | Msa1040160 | 0.805428 | 1.341497e-49 | -8.615850e-47 |
| Msa0021320 | Msa1040160 | 0.802444 | 5.593871e-49 | -8.615850e-47 |
| Msa0027590 | Msa1040160 | 0.889345 | 2.631488e-73 | -8.615850e-47 |
| Msa0032780 | Msa1040160 | 0.809537 | 1.801470e-50 | -8.615850e-47 |
| Msa0040220 | Msa1040160 | 0.890262 | 1.154676e-73 | -8.615850e-47 |
| Msa0042480 | Msa1040160 | 0.816058 | 6.726377e-52 | -8.615850e-47 |
| Msa0044890 | Msa1040160 | 0.819812 | 9.542341e-53 | -8.615850e-47 |
| Msa0068970 | Msa1040160 | 0.822668 | 2.094121e-53 | -8.615850e-47 |
| Msa0070840 | Msa1040160 | 0.852301 | 5.050326e-61 | -8.615850e-47 |
| Msa0072570 | Msa1040160 | 0.826862 | 2.148493e-54 | -8.615850e-47 |
| Msa0075350 | Msa1040160 | 0.875043 | 4.204437e-68 | -8.615850e-47 |
| Msa0079590 | Msa1040160 | 0.820884 | 5.417994e-53 | -8.615850e-47 |
| Msa0087910 | Msa1040160 | 0.889654 | 1.996002e-73 | -8.615850e-47 |
| Msa0114570 | Msa1040160 | 0.828589 | 8.265254e-55 | -8.615850e-47 |
| Msa0114600 | Msa1040160 | 0.802193 | 6.299708e-49 | -8.615850e-47 |
| Msa0602900 | Msa1040160 | 0.821283 | 4.383998e-53 | -8.615850e-47 |
| Msa0605890 | Msa1040160 | 0.838840 | 2.264282e-57 | -8.615850e-47 |
| Msa0608260 | Msa1040160 | 0.815900 | 7.293276e-52 | -8.615850e-47 |
| Msa0619230 | Msa1040160 | 0.825716 | 4.026958e-54 | -8.615850e-47 |
| Msa0622230 | Msa1040160 | 0.819257 | 1.277379e-52 | -8.615850e-47 |
| Msa0643820 | Msa1040160 | 0.823186 | 1.586076e-53 | -8.615850e-47 |
| Msa0643960 | Msa1040160 | 0.825510 | 4.507508e-54 | -8.615850e-47 |
| Msa0648620 | Msa1040160 | 0.812065 | 5.113306e-51 | -8.615850e-47 |
| Msa0648670 | Msa1040160 | 0.810673 | 1.025277e-50 | -8.615850e-47 |
| Msa0653060 | Msa1040160 | 0.903830 | 2.310530e-79 | -8.615850e-47 |
| Msa0686550 | Msa1040160 | 0.815593 | 8.539291e-52 | -8.615850e-47 |
| Msa0691330 | Msa1040160 | 0.807589 | 4.695127e-50 | -8.615850e-47 |
| Msa0694400 | Msa1040160 | 0.859049 | 5.410350e-63 | -8.615850e-47 |
| Msa0704860 | Msa1040160 | 0.807793 | 4.249182e-50 | -8.615850e-47 |
| Msa0705800 | Msa1040160 | 0.859642 | 3.590520e-63 | -8.615850e-47 |
| Msa0708630 | Msa1040160 | 0.820711 | 5.936278e-53 | -8.615850e-47 |
| Msa0712610 | Msa1040160 | 0.829514 | 4.934337e-55 | -8.615850e-47 |
| Msa0717380 | Msa1040160 | 0.852332 | 4.947166e-61 | -8.615850e-47 |
| Msa0748350 | Msa1040160 | 0.804551 | 2.045921e-49 | -8.615850e-47 |
| Msa0758420 | Msa1040160 | 0.813430 | 2.569507e-51 | -8.615850e-47 |
| Msa0781080 | Msa1040160 | 0.822590 | 2.183295e-53 | -8.615850e-47 |
| Msa0781310 | Msa1040160 | 0.823433 | 1.388866e-53 | -8.615850e-47 |
| Msa0783630 | Msa1040160 | 0.810297 | 1.236423e-50 | -8.615850e-47 |
| Msa0788380 | Msa1040160 | 0.898291 | 6.125062e-77 | -8.615850e-47 |
| Msa0790450 | Msa1040160 | 0.807898 | 4.037190e-50 | -8.615850e-47 |
| Msa0799830 | Msa1040160 | 0.865480 | 5.728357e-65 | -8.615850e-47 |
| Msa0817030 | Msa1040160 | 0.814798 | 1.282184e-51 | -8.615850e-47 |
| Msa0822580 | Msa1040160 | 0.822776 | 1.977130e-53 | -8.615850e-47 |
| Msa0838070 | Msa1040160 | 0.820424 | 6.909544e-53 | -8.615850e-47 |
| Msa0128330 | Msa1040160 | 0.830730 | 2.490743e-55 | -8.615850e-47 |
| Msa0132460 | Msa1040160 | 0.820923 | 5.307071e-53 | -8.615850e-47 |
| Msa0133540 | Msa1040160 | 0.801297 | 9.624160e-49 | -8.615850e-47 |
| Msa0134580 | Msa1040160 | 0.865086 | 7.621243e-65 | -8.615850e-47 |
| Msa0138890 | Msa1040160 | 0.825462 | 4.626703e-54 | -8.615850e-47 |
| Msa0144810 | Msa1040160 | 0.811001 | 8.708982e-51 | -8.615850e-47 |
| Msa0146580 | Msa1040160 | 0.825636 | 4.208147e-54 | -8.615850e-47 |
| Msa0167860 | Msa1040160 | 0.852824 | 3.583145e-61 | -8.615850e-47 |
| Msa0172930 | Msa1040160 | 0.827225 | 1.759402e-54 | -8.615850e-47 |
| Msa0174580 | Msa1040160 | 0.820733 | 5.869394e-53 | -8.615850e-47 |
| Msa0181490 | Msa1040160 | 0.807256 | 5.522905e-50 | -8.615850e-47 |
| Msa0182050 | Msa1040160 | 0.823007 | 1.746001e-53 | -8.615850e-47 |
| Msa0186740 | Msa1040160 | 0.826575 | 2.515839e-54 | -8.615850e-47 |
| Msa0187810 | Msa1040160 | 0.807435 | 5.061198e-50 | -8.615850e-47 |
| Msa0191450 | Msa1040160 | 0.877840 | 4.548916e-69 | -8.615850e-47 |
| Msa0191550 | Msa1040160 | 0.877552 | 5.735617e-69 | -8.615850e-47 |
| Msa0192300 | Msa1040160 | 0.813871 | 2.055095e-51 | -8.615850e-47 |
| Msa0192750 | Msa1040160 | 0.851661 | 7.673536e-61 | -8.615850e-47 |
| Msa0194940 | Msa1040160 | 0.882228 | 1.241895e-70 | -8.615850e-47 |
| Msa0210330 | Msa1040160 | 0.864537 | 1.131917e-64 | -8.615850e-47 |
| Msa0210360 | Msa1040160 | 0.883854 | 3.152948e-71 | -8.615850e-47 |
| Msa0222730 | Msa1040160 | 0.849392 | 3.331276e-60 | -8.615850e-47 |
| Msa0223440 | Msa1040160 | 0.839638 | 1.405468e-57 | -8.615850e-47 |
| Msa0235050 | Msa1040160 | 0.841597 | 4.315208e-58 | -8.615850e-47 |
| Msa0369410 | Msa1040160 | 0.901698 | 2.058908e-78 | -8.615850e-47 |
| Msa0377520 | Msa1040160 | 0.848570 | 5.632858e-60 | -8.615850e-47 |
| Msa0426090 | Msa1040160 | 0.924084 | 1.129637e-89 | -8.615850e-47 |
| Msa0426250 | Msa1040160 | 0.912065 | 2.983866e-83 | -8.615850e-47 |
| Msa0463520 | Msa1040160 | 0.880381 | 5.754938e-70 | -8.615850e-47 |
| Msa0471880 | Msa1040160 | 0.814252 | 1.693994e-51 | -8.615850e-47 |
| Msa0472480 | Msa1040160 | 0.920527 | 1.143161e-87 | -8.615850e-47 |
| Msa0473390 | Msa1040160 | 0.802911 | 4.480230e-49 | -8.615850e-47 |
| Msa0475810 | Msa1040160 | 0.889551 | 2.189664e-73 | -8.615850e-47 |
| Msa0481520 | Msa1040160 | 0.880568 | 4.930659e-70 | -8.615850e-47 |
| Msa0481850 | Msa1040160 | 0.836036 | 1.183703e-56 | -8.615850e-47 |
| Msa0482560 | Msa1040160 | 0.803404 | 3.543318e-49 | -8.615850e-47 |
| Msa1037290 | Msa1040160 | 0.881689 | 1.947722e-70 | -8.615850e-47 |
| Msa1040160 | Msa1041680 | 0.885350 | 8.768591e-72 | -8.615850e-47 |
| Msa1040160 | Msa1042100 | 0.807391 | 5.171328e-50 | -8.615850e-47 |
| Msa1040160 | Msa1050100 | 0.812235 | 4.694422e-51 | -8.615850e-47 |
| Msa1040160 | Msa1054280 | 0.867733 | 1.100752e-65 | -8.615850e-47 |
| Msa1040160 | Msa1058700 | 0.848310 | 6.650738e-60 | -8.615850e-47 |
| Msa1040160 | Msa1078870 | 0.861291 | 1.137495e-63 | -8.615850e-47 |
| Msa1040160 | Msa1078980 | 0.893790 | 4.526623e-75 | -8.615850e-47 |
| Msa1040160 | Msa1079910 | 0.822066 | 2.888996e-53 | -8.615850e-47 |
| Msa1040160 | Msa1079920 | 0.803798 | 2.935198e-49 | -8.615850e-47 |
| Msa1040160 | Msa1080350 | 0.835146 | 1.988627e-56 | -8.615850e-47 |
| Msa1040160 | Msa1082170 | 0.865350 | 6.293281e-65 | -8.615850e-47 |
| Msa1040160 | Msa1083370 | 0.972988 | 1.129547e-135 | -8.615850e-47 |
| Msa1040160 | Msa1088490 | 0.805535 | 1.273914e-49 | -8.615850e-47 |
| Msa1040160 | Msa1089220 | 0.826058 | 3.341435e-54 | -8.615850e-47 |
| Msa1040160 | Msa1094380 | 0.818383 | 2.017689e-52 | -8.615850e-47 |
| Msa1040160 | Msa1096900 | 0.823915 | 1.070832e-53 | -8.615850e-47 |
| Msa1040160 | Msa1116940 | 0.839559 | 1.473612e-57 | -8.615850e-47 |
| Msa1040160 | Msa1124850 | 0.860409 | 2.107179e-63 | -8.615850e-47 |
| Msa1040160 | Msa1125860 | 0.825347 | 4.924952e-54 | -8.615850e-47 |
| Msa1040160 | Msa1126060 | 0.828512 | 8.626088e-55 | -8.615850e-47 |
| Msa1040160 | Msa1126520 | 0.833925 | 4.028877e-56 | -8.615850e-47 |
| Msa1040160 | Msa1128120 | 0.846170 | 2.569822e-59 | -8.615850e-47 |
| Msa1040160 | Msa1147670 | 0.805241 | 1.467727e-49 | -8.615850e-47 |
| Msa1040160 | Msa1164150 | 0.868163 | 8.010383e-66 | -8.615850e-47 |
| Msa1040160 | Msa1165640 | 0.821405 | 4.108495e-53 | -8.615850e-47 |
| Msa1040160 | Msa1166570 | 0.885978 | 5.100838e-72 | -8.615850e-47 |
| Msa1040160 | Msa1167540 | 0.871659 | 5.775068e-67 | -8.615850e-47 |
| Msa1040160 | Msa1167550 | 0.896628 | 3.074843e-76 | -8.615850e-47 |
| Msa1040160 | Msa1169180 | 0.879014 | 1.760109e-69 | -8.615850e-47 |
| Msa1040160 | Msa1180000 | 0.853601 | 2.145786e-61 | -8.615850e-47 |
| Msa1040160 | Msa1186030 | 0.903983 | 1.972291e-79 | -8.615850e-47 |
| Msa1040160 | Msa1203560 | 0.813225 | 2.850635e-51 | -8.615850e-47 |
| Msa1040160 | Msa1208330 | 0.802588 | 5.225342e-49 | -8.615850e-47 |
| Msa1040160 | Msa1218170 | 0.856907 | 2.342058e-62 | -8.615850e-47 |
| Msa1040160 | Msa1237040 | 0.856366 | 3.378693e-62 | -8.615850e-47 |
| Msa1040160 | Msa1240270 | 0.899398 | 2.061092e-77 | -8.615850e-47 |
| Msa1040160 | Msa1258540 | 0.870140 | 1.827248e-66 | -8.615850e-47 |
| Msa1040160 | Msa1270640 | 0.845472 | 3.975457e-59 | -8.615850e-47 |
| Msa1040160 | Msa1270710 | 0.839191 | 1.836237e-57 | -8.615850e-47 |
| Msa1040160 | Msa1278130 | 0.872042 | 4.309763e-67 | -8.615850e-47 |
| Msa1040160 | Msa1284060 | 0.808265 | 3.371144e-50 | -8.615850e-47 |
| Msa1040160 | Msa1311400 | 0.874864 | 4.837989e-68 | -8.615850e-47 |
| Msa1040160 | Msa1317390 | 0.830073 | 3.606270e-55 | -8.615850e-47 |
| Msa1040160 | Msa1332250 | 0.843933 | 1.032878e-58 | -8.615850e-47 |
| Msa1040160 | Msa1341130 | 0.816248 | 6.098569e-52 | -8.615850e-47 |
| Msa1040160 | Msa1341780 | 0.802181 | 6.337411e-49 | -8.615850e-47 |
| Msa1040160 | Msa1351020 | 0.809058 | 2.283125e-50 | -8.615850e-47 |
| Msa1040160 | Msa1351910 | 0.830893 | 2.272489e-55 | -8.615850e-47 |
| Msa1040160 | Msa1356790 | 0.835768 | 1.384410e-56 | -8.615850e-47 |
| Msa1040160 | Msa1358710 | 0.825462 | 4.626703e-54 | -8.615850e-47 |
| Msa1040160 | Msa1364110 | 0.840452 | 8.622235e-58 | -8.615850e-47 |
| Msa1040160 | Msa1368920 | 0.882634 | 8.839236e-71 | -8.615850e-47 |
| Msa1040160 | Msa1374240 | 0.815666 | 8.225283e-52 | -8.615850e-47 |
| Msa1040160 | Msa1385480 | 0.835133 | 2.003228e-56 | -8.615850e-47 |
| Msa1040160 | Msa1390760 | 0.822515 | 2.273425e-53 | -8.615850e-47 |
| Msa1040160 | Msa1392590 | 0.856895 | 2.360137e-62 | -8.615850e-47 |
| Msa1040160 | Msa1397100 | 0.812594 | 3.919231e-51 | -8.615850e-47 |
| Msa1040160 | Msa1397660 | 0.804154 | 2.474811e-49 | -8.615850e-47 |
| Msa1040160 | Msa1403910 | 0.832662 | 8.316873e-56 | -8.615850e-47 |
| Msa1040160 | Msa1418770 | 0.826589 | 2.496770e-54 | -8.615850e-47 |
| Msa1040160 | Msa1425070 | 0.804751 | 1.858217e-49 | -8.615850e-47 |
| Msa1040160 | Msa1426120 | 0.878995 | 1.787353e-69 | -8.615850e-47 |
| Msa1040160 | Msa1426490 | 0.830638 | 2.623300e-55 | -8.615850e-47 |
| Msa1040160 | Msa1444240 | 0.804226 | 2.391111e-49 | -8.615850e-47 |
| Msa1040160 | Msa1446410 | 0.812410 | 4.299250e-51 | -8.615850e-47 |
| Msa1040160 | Msa1449160 | 0.806798 | 6.905185e-50 | -8.615850e-47 |
| Msa1040160 | Msa1450560 | 0.813697 | 2.244479e-51 | -8.615850e-47 |
| Msa1040160 | Msa1453530 | 0.800254 | 1.571118e-48 | -8.615850e-47 |
| Msa1040160 | Msa1463570 | 0.827676 | 1.371588e-54 | -8.615850e-47 |
| Msa1040160 | Msa1465700 | 0.800428 | 1.448178e-48 | -8.615850e-47 |
| Msa0239420 | Msa1040160 | 0.809419 | 1.910039e-50 | -8.615850e-47 |
| Msa0264640 | Msa1040160 | 0.803792 | 2.944050e-49 | -8.615850e-47 |
| Msa0265250 | Msa1040160 | 0.829190 | 5.913192e-55 | -8.615850e-47 |
| Msa0269180 | Msa1040160 | 0.831879 | 1.299711e-55 | -8.615850e-47 |
| Msa0277600 | Msa1040160 | 0.806722 | 7.163753e-50 | -8.615850e-47 |
| Msa0281330 | Msa1040160 | 0.831271 | 1.835339e-55 | -8.615850e-47 |
| Msa0281370 | Msa1040160 | 0.856626 | 2.833067e-62 | -8.615850e-47 |
| Msa0297830 | Msa1040160 | 0.885449 | 8.056906e-72 | -8.615850e-47 |
| Msa0298870 | Msa1040160 | 0.812544 | 4.019914e-51 | -8.615850e-47 |
| Msa0301220 | Msa1040160 | 0.880538 | 5.055061e-70 | -8.615850e-47 |
| Msa0301250 | Msa1040160 | 0.805919 | 1.057963e-49 | -8.615850e-47 |
| Msa0306690 | Msa1040160 | 0.803792 | 2.944050e-49 | -8.615850e-47 |
| Msa0312210 | Msa1040160 | 0.829871 | 4.038183e-55 | -8.615850e-47 |
| Msa0313060 | Msa1040160 | 0.837172 | 6.078826e-57 | -8.615850e-47 |
| Msa0315430 | Msa1040160 | 0.846685 | 1.859549e-59 | -8.615850e-47 |
| Msa0335840 | Msa1040160 | 0.898779 | 3.797783e-77 | -8.615850e-47 |
| Msa0340560 | Msa1040160 | 0.834773 | 2.468419e-56 | -8.615850e-47 |
| Msa0342850 | Msa1040160 | 0.861263 | 1.159825e-63 | -8.615850e-47 |
| Msa0483110 | Msa1040160 | 0.801634 | 8.207279e-49 | -8.615850e-47 |
| Msa0486070 | Msa1040160 | 0.817987 | 2.479601e-52 | -8.615850e-47 |
| Msa0517480 | Msa1040160 | 0.854841 | 9.406136e-62 | -8.615850e-47 |
| Msa0529900 | Msa1040160 | 0.844625 | 6.734636e-59 | -8.615850e-47 |
| Msa0540480 | Msa1040160 | 0.823878 | 1.092900e-53 | -8.615850e-47 |
| Msa0544720 | Msa1040160 | 0.802118 | 6.529292e-49 | -8.615850e-47 |
| Msa0547920 | Msa1040160 | 0.833436 | 5.340466e-56 | -8.615850e-47 |
| Msa0550420 | Msa1040160 | 0.833130 | 6.365534e-56 | -8.615850e-47 |
| Msa0573550 | Msa1040160 | 0.869407 | 3.169245e-66 | -8.615850e-47 |
| Msa0582070 | Msa1040160 | 0.803182 | 3.938306e-49 | -8.615850e-47 |
| Msa0584030 | Msa1040160 | 0.812566 | 3.974294e-51 | -8.615850e-47 |
| Msa0596370 | Msa1040160 | 0.874824 | 4.993312e-68 | -8.615850e-47 |
| Msa0597240 | Msa1040160 | 0.869519 | 2.913918e-66 | -8.615850e-47 |
| Msa0860860 | Msa1040160 | 0.809336 | 1.990106e-50 | -8.615850e-47 |
| Msa0861320 | Msa1040160 | 0.859256 | 4.691540e-63 | -8.615850e-47 |
| Msa0902220 | Msa1040160 | 0.800340 | 1.509302e-48 | -8.615850e-47 |
| Msa0915540 | Msa1040160 | 0.849727 | 2.686291e-60 | -8.615850e-47 |
| Msa0927910 | Msa1040160 | 0.805904 | 1.065731e-49 | -8.615850e-47 |
| Msa0929680 | Msa1040160 | 0.831650 | 1.480217e-55 | -8.615850e-47 |
| Msa0929700 | Msa1040160 | 0.877054 | 8.543432e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040160 | MtrunA17_Chr7g0271401 | 99.034 | 207 | 2 | 0 | 1 | 207 | 1 | 207 | 2.09e-151 | 418 |
| Msa1040160 | MtrunA17_Chr5g0409231 | 98.551 | 207 | 3 | 0 | 1 | 207 | 1 | 207 | 1.03e-150 | 416 |
| Msa1040160 | MtrunA17_Chr1g0155011 | 97.585 | 207 | 5 | 0 | 1 | 207 | 1 | 207 | 2.47e-149 | 413 |
| Msa1040160 | MtrunA17_Chr8g0369561 | 86.538 | 52 | 7 | 0 | 133 | 184 | 6 | 57 | 5.28e-27 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040160 | AT3G49010.3 | 87.435 | 191 | 24 | 0 | 2 | 192 | 1 | 191 | 2.48e-126 | 355 |
| Msa1040160 | AT3G49010.6 | 87.435 | 191 | 24 | 0 | 2 | 192 | 1 | 191 | 2.48e-126 | 355 |
| Msa1040160 | AT3G49010.1 | 87.435 | 191 | 24 | 0 | 2 | 192 | 1 | 191 | 2.48e-126 | 355 |
| Msa1040160 | AT3G49010.2 | 87.435 | 191 | 24 | 0 | 2 | 192 | 1 | 191 | 2.48e-126 | 355 |
| Msa1040160 | AT3G49010.7 | 87.435 | 191 | 24 | 0 | 2 | 192 | 1 | 191 | 2.48e-126 | 355 |
| Msa1040160 | AT3G49010.4 | 86.387 | 191 | 24 | 1 | 2 | 192 | 1 | 189 | 4.17e-123 | 347 |
| Msa1040160 | AT5G23900.1 | 85.484 | 186 | 27 | 0 | 2 | 187 | 1 | 186 | 1.72e-119 | 338 |
| Msa1040160 | AT3G48960.1 | 77.083 | 192 | 44 | 0 | 2 | 193 | 1 | 192 | 4.73e-109 | 311 |
| Msa1040160 | AT3G49010.5 | 61.257 | 191 | 21 | 1 | 2 | 192 | 1 | 138 | 3.91e-78 | 231 |
Find 70 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGAAATGAAGGCATTTA+AGG | 0.167170 | 7_1:-77517210 | Msa1040160:CDS |
| CGTCTTCTCGTCTTCCTTGC+AGG | 0.238053 | 7_1:+77518895 | None:intergenic |
| TTGACCTTGCGTGCACGTCT+TGG | 0.342253 | 7_1:+77517474 | None:intergenic |
| GCGAACAAACAAACGCCATT+TGG | 0.357834 | 7_1:-77517165 | Msa1040160:CDS |
| GTTTGTTGGTTTAACTAGTC+TGG | 0.358018 | 7_1:-77516947 | Msa1040160:three_prime_UTR |
| CGAACAAACAAACGCCATTT+GGG | 0.361720 | 7_1:-77517164 | Msa1040160:CDS |
| AAGAGTATAGTGGCAGAAAA+TGG | 0.365376 | 7_1:+77519549 | None:intergenic |
| AGTGGTCCAGCTGTAGGCCT+TGG | 0.374314 | 7_1:+77518725 | None:intergenic |
| TGCTTGCGGAAGTGTTCATT+AGG | 0.386045 | 7_1:+77518952 | None:intergenic |
| TGACCTTGCGTGCACGTCTT+GGG | 0.387927 | 7_1:+77517475 | None:intergenic |
| TGAGTCTGTCCATGAACAAT+AGG | 0.403921 | 7_1:+77518698 | None:intergenic |
| AGAAATACAACATGAAACTA+AGG | 0.404501 | 7_1:-77518676 | Msa1040160:CDS |
| CTCGGCAGCCCTCTTCAGTC+TGG | 0.408929 | 7_1:+77517139 | None:intergenic |
| CCACTCAGGCCTATTGTTCA+TGG | 0.419917 | 7_1:-77518707 | Msa1040160:CDS |
| AGACAAGAAGTGAAAACTTA+AGG | 0.420622 | 7_1:-77517105 | Msa1040160:exon |
| CTTCTCCCTTGAGGAGTTGA+AGG | 0.436371 | 7_1:-77518642 | Msa1040160:intron |
| GTCTTGCAATAACTATCATA+AGG | 0.439762 | 7_1:+77517061 | None:intergenic |
| GTAGCATTTGCTAGTTCCTC+AGG | 0.441712 | 7_1:+77517299 | None:intergenic |
| TCTTCAGTCTGGCACCCAAA+TGG | 0.461938 | 7_1:+77517150 | None:intergenic |
| GCTTGCGGAAGTGTTCATTA+GGG | 0.463786 | 7_1:+77518953 | None:intergenic |
| TAAGATTACAAATGAAATGA+AGG | 0.465235 | 7_1:-77517219 | Msa1040160:CDS |
| GTATGGCTATTCAAGTTTGT+TGG | 0.466014 | 7_1:-77516961 | Msa1040160:three_prime_UTR |
| GATGGCTTCTCCCTCACAAT+TGG | 0.470493 | 7_1:+77517254 | None:intergenic |
| GAGGGCTGCCGAGGCAGAGA+AGG | 0.474906 | 7_1:-77517129 | Msa1040160:CDS |
| CTTGTCTTCCTTCTCTGCCT+CGG | 0.482926 | 7_1:+77517121 | None:intergenic |
| GTGGTCCAGCTGTAGGCCTT+GGG | 0.485461 | 7_1:+77518726 | None:intergenic |
| TCTTGCAATAACTATCATAA+GGG | 0.491378 | 7_1:+77517062 | None:intergenic |
| TCGCCGCAAGAACCGATCCT+TGG | 0.500226 | 7_1:-77517556 | Msa1040160:CDS |
| CTTGCAGACCTTCCAAGGAT+CGG | 0.513686 | 7_1:+77517544 | None:intergenic |
| GCAAATGCTACACAGGTTCA+AGG | 0.515568 | 7_1:-77517287 | Msa1040160:CDS |
| TTCTCGTCTTCCTTGCAGGT+TGG | 0.518598 | 7_1:+77518899 | None:intergenic |
| TCGACAGAAATACCAATAGT+TGG | 0.524260 | 7_1:+77517582 | None:intergenic |
| TGTTTACCTTCAACTCCTCA+AGG | 0.536157 | 7_1:+77518636 | None:intergenic |
| GTTGGCTTGCAGACCTTCCA+AGG | 0.544997 | 7_1:+77517539 | None:intergenic |
| CTTCCCAAGACGTGCACGCA+AGG | 0.546682 | 7_1:-77517478 | Msa1040160:CDS |
| ATGAACACTTCCGCAAGCAT+TGG | 0.548841 | 7_1:-77518948 | Msa1040160:CDS |
| AGTGGCAGAAAATGGAGACT+AGG | 0.555231 | 7_1:+77519557 | None:intergenic |
| GGAGCAGCTGAAGAGTATAG+TGG | 0.558926 | 7_1:+77519539 | None:intergenic |
| ATGAAACTAAGGGCTGGTAA+AGG | 0.560135 | 7_1:-77518665 | Msa1040160:CDS |
| GAAATACAACATGAAACTAA+GGG | 0.563936 | 7_1:-77518675 | Msa1040160:CDS |
| AGGAAGACGAGAAGACGCTT+AGG | 0.564086 | 7_1:-77518889 | Msa1040160:intron |
| TCTTGGGAAGACGACCAACT+TGG | 0.564678 | 7_1:+77517491 | None:intergenic |
| AAGACGTGCACGCAAGGTCA+AGG | 0.565249 | 7_1:-77517472 | Msa1040160:intron |
| TACAACATGAAACTAAGGGC+TGG | 0.568361 | 7_1:-77518671 | Msa1040160:CDS |
| CCTGCTCGTGAAATCGCCGC+AGG | 0.573101 | 7_1:-77519518 | Msa1040160:intron |
| TTCATACTTACCAATTGTGA+GGG | 0.574179 | 7_1:-77517264 | Msa1040160:CDS |
| CAGACTGAAGAGGGCTGCCG+AGG | 0.574750 | 7_1:-77517138 | Msa1040160:CDS |
| CGCAAGAACCGATCCTTGGA+AGG | 0.582614 | 7_1:-77517552 | Msa1040160:CDS |
| GTCTGCAAGCCAACGTGCAG+AGG | 0.583501 | 7_1:-77517530 | Msa1040160:CDS |
| CTTCCAAGGATCGGTTCTTG+CGG | 0.585506 | 7_1:+77517553 | None:intergenic |
| TGGTAAAGGCTTCTCCCTTG+AGG | 0.585769 | 7_1:-77518651 | Msa1040160:CDS |
| AGGCCTTGGGAAAATCTTCA+CGG | 0.587332 | 7_1:+77518739 | None:intergenic |
| GTTCATACTTACCAATTGTG+AGG | 0.591073 | 7_1:-77517265 | Msa1040160:CDS |
| ATTTGGGTGCCAGACTGAAG+AGG | 0.592370 | 7_1:-77517148 | Msa1040160:CDS |
| CCTGCGGCGATTTCACGAGC+AGG | 0.592999 | 7_1:+77519518 | None:intergenic |
| AAATTGCTTAGTTTGAGACA+TGG | 0.594953 | 7_1:-77517009 | Msa1040160:three_prime_UTR |
| GGCTGGTGATTCCACTCCTG+AGG | 0.595885 | 7_1:-77517315 | Msa1040160:CDS |
| GAAGACATACAAGGCCAAGT+TGG | 0.599063 | 7_1:-77517505 | Msa1040160:CDS |
| GGCCTACAGCTGGACCACTC+AGG | 0.602263 | 7_1:-77518721 | Msa1040160:CDS |
| ATCTTAACAAGCTCTACAGA+TGG | 0.608105 | 7_1:+77517236 | None:intergenic |
| TTTGGGTGCCAGACTGAAGA+GGG | 0.608247 | 7_1:-77517147 | Msa1040160:CDS |
| GGCAAAACTATGTCAAGACA+TGG | 0.612396 | 7_1:-77518927 | Msa1040160:CDS |
| ATTTGCTAGTTCCTCAGGAG+TGG | 0.614969 | 7_1:+77517304 | None:intergenic |
| TGTCTTCAGCCTCTGCACGT+TGG | 0.625495 | 7_1:+77517521 | None:intergenic |
| GTTTACCTTCAACTCCTCAA+GGG | 0.627618 | 7_1:+77518637 | None:intergenic |
| GGCCTGAGTGGTCCAGCTGT+AGG | 0.635974 | 7_1:+77518719 | None:intergenic |
| GGAACTAGCAAATGCTACAC+AGG | 0.641783 | 7_1:-77517294 | Msa1040160:CDS |
| CATGGTTTAACCAACCTGCA+AGG | 0.654567 | 7_1:-77518909 | Msa1040160:CDS |
| CCATGAACAATAGGCCTGAG+TGG | 0.655173 | 7_1:+77518707 | None:intergenic |
| GCAGAGGCTGAAGACATACA+AGG | 0.685449 | 7_1:-77517514 | Msa1040160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTATAATAATATCATC+AGG | + | chr7_1:77518076-77518095 | None:intergenic | 10.0% |
| !!! | CAGATTTTTTATTTGTTTTT+GGG | - | chr7_1:77517149-77517168 | Msa1040160:CDS | 15.0% |
| !!! | AGATTTTTTATTTGTTTTTG+GGG | - | chr7_1:77517150-77517169 | Msa1040160:CDS | 15.0% |
| !! | AAAAAAACAATAAATCAGAA+AGG | + | chr7_1:77517332-77517351 | None:intergenic | 15.0% |
| !!! | TTTCTGATTTATTGTTTTTT+TGG | - | chr7_1:77517331-77517350 | Msa1040160:intron | 15.0% |
| !!! | AAATTCTAGATATTTACTTT+TGG | - | chr7_1:77517823-77517842 | Msa1040160:intron | 15.0% |
| !! | TTTAAGAATATGTAACAAAA+TGG | - | chr7_1:77517988-77518007 | Msa1040160:intron | 15.0% |
| !! | AAAAACAAACTCAATTAAAT+TGG | + | chr7_1:77518261-77518280 | None:intergenic | 15.0% |
| !!! | TTAATTGAGTTTGTTTTTTA+AGG | - | chr7_1:77518263-77518282 | Msa1040160:intron | 15.0% |
| !!! | TTTCTTCTATTTTATAATGT+AGG | - | chr7_1:77518724-77518743 | Msa1040160:CDS | 15.0% |
| !!! | GCAGATTTTTTATTTGTTTT+TGG | - | chr7_1:77517148-77517167 | Msa1040160:CDS | 20.0% |
| !!! | TTTTTTTGGTTGATATTTGA+AGG | - | chr7_1:77517345-77517364 | Msa1040160:intron | 20.0% |
| !!! | TTTGATTTATTTGACTTGAT+GGG | - | chr7_1:77517563-77517582 | Msa1040160:CDS | 20.0% |
| !!! | TTTTAGCATTATCAAAAAAG+TGG | - | chr7_1:77517787-77517806 | Msa1040160:intron | 20.0% |
| !! | AAACTAAAAACTCTTAAAAC+CGG | + | chr7_1:77518358-77518377 | None:intergenic | 20.0% |
| !!! | TTTTTACTTTACCTTTTCAA+TGG | - | chr7_1:77518690-77518709 | Msa1040160:CDS | 20.0% |
| !! | TAAGAAATAAACCATTGAAA+AGG | + | chr7_1:77518704-77518723 | None:intergenic | 20.0% |
| !!! | TATGACCTTTTTCTTAATTT+TGG | - | chr7_1:77518937-77518956 | Msa1040160:CDS | 20.0% |
| !! | TAAGATTACAAATGAAATGA+AGG | - | chr7_1:77519136-77519155 | Msa1040160:intron | 20.0% |
| !!! | TTAGCATGTTTTATTTTTCA+TGG | - | chr7_1:77519436-77519455 | Msa1040160:intron | 20.0% |
| !!! | TAGCATGTTTTATTTTTCAT+GGG | - | chr7_1:77519437-77519456 | Msa1040160:intron | 20.0% |
| ! | AATTGATTATGCTGTTGAAT+TGG | - | chr7_1:77517010-77517029 | Msa1040160:three_prime_UTR | 25.0% |
| ! | TGAGAAAGAATGTATATATG+CGG | - | chr7_1:77517064-77517083 | Msa1040160:three_prime_UTR | 25.0% |
| ! | ATAAAAAATCTGCACTATTG+AGG | + | chr7_1:77517141-77517160 | None:intergenic | 25.0% |
| !!! | CTTTGATTTATTTGACTTGA+TGG | - | chr7_1:77517562-77517581 | Msa1040160:CDS | 25.0% |
| ! | AGAAATACAACATGAAACTA+AGG | - | chr7_1:77517679-77517698 | Msa1040160:intron | 25.0% |
| ! | GAAATACAACATGAAACTAA+GGG | - | chr7_1:77517680-77517699 | Msa1040160:intron | 25.0% |
| ! | AAATTGCAAGTCACTAAAAA+CGG | - | chr7_1:77517886-77517905 | Msa1040160:intron | 25.0% |
| ! | ATAGGTAAAAATACTCCATA+TGG | + | chr7_1:77518226-77518245 | None:intergenic | 25.0% |
| !!! | TATGGAGTATTTTTACCTAT+AGG | - | chr7_1:77518226-77518245 | Msa1040160:intron | 25.0% |
| !!! | AGTATTTTTACCTATAGGAT+TGG | - | chr7_1:77518231-77518250 | Msa1040160:intron | 25.0% |
| ! | AACTAAAAACTCTTAAAACC+GGG | + | chr7_1:77518357-77518376 | None:intergenic | 25.0% |
| !! | ACAACTAAAGTAGATTTTGA+TGG | + | chr7_1:77518394-77518413 | None:intergenic | 25.0% |
| ! | AAATCTACTTTAGTTGTTAC+AGG | - | chr7_1:77518397-77518416 | Msa1040160:intron | 25.0% |
| !! | AAGAAATCATGGATTATACA+AGG | + | chr7_1:77518474-77518493 | None:intergenic | 25.0% |
| !! | AATATGATTAGTGTTTTCAG+TGG | + | chr7_1:77518507-77518526 | None:intergenic | 25.0% |
| ! | TTCAAATTTATCAGCAATGA+CGG | + | chr7_1:77518965-77518984 | None:intergenic | 25.0% |
| ! | GCATTATTCTTAATTTCTTC+TGG | - | chr7_1:77518999-77519018 | Msa1040160:intron | 25.0% |
| !!! | AAATGAAATGAAGGCATTTA+AGG | - | chr7_1:77519145-77519164 | Msa1040160:intron | 25.0% |
| ! | TCTTGCAATAACTATCATAA+GGG | + | chr7_1:77519296-77519315 | None:intergenic | 25.0% |
| TCAACAGCATAATCAATTGT+GGG | + | chr7_1:77517008-77517027 | None:intergenic | 30.0% | |
| TTCAACAGCATAATCAATTG+TGG | + | chr7_1:77517009-77517028 | None:intergenic | 30.0% | |
| GCATATATACATTCTTTCTC+AGG | + | chr7_1:77517065-77517084 | None:intergenic | 30.0% | |
| ! | ACTATTGAGGTTTTACGAAT+TGG | + | chr7_1:77517128-77517147 | None:intergenic | 30.0% |
| !!! | TTGTTTTTGGGGAAATGATA+TGG | - | chr7_1:77517161-77517180 | Msa1040160:CDS | 30.0% |
| ! | TTGGTTGATATTTGAAGGTA+AGG | - | chr7_1:77517350-77517369 | Msa1040160:intron | 30.0% |
| TTTGAAGGTAAGGTGAAAAA+TGG | - | chr7_1:77517360-77517379 | Msa1040160:intron | 30.0% | |
| TAAAAATACTCCATATGGAC+AGG | + | chr7_1:77518221-77518240 | None:intergenic | 30.0% | |
| !!! | AGTTTGTTTTTTAAGGCCTA+TGG | - | chr7_1:77518270-77518289 | Msa1040160:intron | 30.0% |
| ! | AAATCATGGATTATACAAGG+AGG | + | chr7_1:77518471-77518490 | None:intergenic | 30.0% |
| GTGTATAAGCAAAGAAATCA+TGG | + | chr7_1:77518485-77518504 | None:intergenic | 30.0% | |
| TCACAACTGAAGAGAATATT+CGG | + | chr7_1:77518552-77518571 | None:intergenic | 30.0% | |
| GACAGAATTGAATATGAAAC+AGG | + | chr7_1:77518575-77518594 | None:intergenic | 30.0% | |
| ! | TATTTTATAATGTAGGCTGC+TGG | - | chr7_1:77518731-77518750 | Msa1040160:CDS | 30.0% |
| CGGTACCAAAATTAAGAAAA+AGG | + | chr7_1:77518945-77518964 | None:intergenic | 30.0% | |
| TTCATACTTACCAATTGTGA+GGG | - | chr7_1:77519091-77519110 | Msa1040160:intron | 30.0% | |
| AGACAAGAAGTGAAAACTTA+AGG | - | chr7_1:77519250-77519269 | Msa1040160:intron | 30.0% | |
| GTCTTGCAATAACTATCATA+AGG | + | chr7_1:77519297-77519316 | None:intergenic | 30.0% | |
| ! | AAATTGCTTAGTTTGAGACA+TGG | - | chr7_1:77519346-77519365 | Msa1040160:intron | 30.0% |
| !!! | TGCTGTTATTTTGTGAAGTA+TGG | - | chr7_1:77519377-77519396 | Msa1040160:intron | 30.0% |
| TGCAGACAAAATTCTTTGAA+GGG | - | chr7_1:77519479-77519498 | Msa1040160:intron | 30.0% | |
| ! | AAGAGTATAGTGGCAGAAAA+TGG | + | chr7_1:77516809-77516828 | None:intergenic | 35.0% |
| AGTTGTGATTGGAATGTGAA+AGG | + | chr7_1:77516884-77516903 | None:intergenic | 35.0% | |
| ACAGTTCTGTGTAGCAAAAA+GGG | + | chr7_1:77517039-77517058 | None:intergenic | 35.0% | |
| AACAGTTCTGTGTAGCAAAA+AGG | + | chr7_1:77517040-77517059 | None:intergenic | 35.0% | |
| ACACATGGATGGATGATTTA+TGG | + | chr7_1:77517099-77517118 | None:intergenic | 35.0% | |
| AAATCATCCATCCATGTGTT+TGG | - | chr7_1:77517100-77517119 | Msa1040160:exon | 35.0% | |
| ! | TAAGATGAGAAAAGCGGATT+CGG | + | chr7_1:77517238-77517257 | None:intergenic | 35.0% |
| ! | GAGATCTAAGATGAGAAAAG+CGG | + | chr7_1:77517244-77517263 | None:intergenic | 35.0% |
| CAAGCTCTATGTGAAATTAC+AGG | - | chr7_1:77518043-77518062 | Msa1040160:intron | 35.0% | |
| AACCCTGACAATCAAGTTAT+AGG | - | chr7_1:77518320-77518339 | Msa1040160:intron | 35.0% | |
| GACCTATAACTTGATTGTCA+GGG | + | chr7_1:77518325-77518344 | None:intergenic | 35.0% | |
| AGACCTATAACTTGATTGTC+AGG | + | chr7_1:77518326-77518345 | None:intergenic | 35.0% | |
| TACTAGATGCACTCAAACTA+AGG | + | chr7_1:77518633-77518652 | None:intergenic | 35.0% | |
| ! | ATAGTTGGAGCAAGCTTTTT+GGG | + | chr7_1:77518761-77518780 | None:intergenic | 35.0% |
| ! | AATAGTTGGAGCAAGCTTTT+TGG | + | chr7_1:77518762-77518781 | None:intergenic | 35.0% |
| ! | AAAAAGCTTGCTCCAACTAT+TGG | - | chr7_1:77518761-77518780 | Msa1040160:intron | 35.0% |
| TCGACAGAAATACCAATAGT+TGG | + | chr7_1:77518776-77518795 | None:intergenic | 35.0% | |
| CAGCCTGGAAATAAAAAACA+GGG | + | chr7_1:77519025-77519044 | None:intergenic | 35.0% | |
| GTTCATACTTACCAATTGTG+AGG | - | chr7_1:77519090-77519109 | Msa1040160:intron | 35.0% | |
| ATCTTAACAAGCTCTACAGA+TGG | + | chr7_1:77519122-77519141 | None:intergenic | 35.0% | |
| ! | GTATGGCTATTCAAGTTTGT+TGG | - | chr7_1:77519394-77519413 | Msa1040160:intron | 35.0% |
| !! | GTTTGTTGGTTTAACTAGTC+TGG | - | chr7_1:77519408-77519427 | Msa1040160:intron | 35.0% |
| CTGCAGACAAAATTCTTTGA+AGG | - | chr7_1:77519478-77519497 | Msa1040160:intron | 35.0% | |
| ! | GACAAAATTCTTTGAAGGGT+TGG | - | chr7_1:77519483-77519502 | Msa1040160:intron | 35.0% |
| GATTGGAATGTGAAAGGAGA+AGG | + | chr7_1:77516878-77516897 | None:intergenic | 40.0% | |
| CACATTCCAATCACAACTCT+TGG | - | chr7_1:77516886-77516905 | Msa1040160:three_prime_UTR | 40.0% | |
| ! | AAAGCACCAAGAGTTGTGAT+TGG | + | chr7_1:77516895-77516914 | None:intergenic | 40.0% |
| !!! | ACAACTCTTGGTGCTTTTCT+CGG | - | chr7_1:77516898-77516917 | Msa1040160:three_prime_UTR | 40.0% |
| AATCGCAAAATGCTAGCTGA+TGG | - | chr7_1:77516954-77516973 | Msa1040160:three_prime_UTR | 40.0% | |
| !! | CATAGTTTTGCCAATGCTTG+CGG | + | chr7_1:77517420-77517439 | None:intergenic | 40.0% |
| GGCAAAACTATGTCAAGACA+TGG | - | chr7_1:77517428-77517447 | Msa1040160:intron | 40.0% | |
| ! | ATTTTCAGCTCGTCAGAAGA+AGG | - | chr7_1:77517593-77517612 | Msa1040160:CDS | 40.0% |
| TGAGTCTGTCCATGAACAAT+AGG | + | chr7_1:77517660-77517679 | None:intergenic | 40.0% | |
| TACAACATGAAACTAAGGGC+TGG | - | chr7_1:77517684-77517703 | Msa1040160:intron | 40.0% | |
| ! | ATGAAACTAAGGGCTGGTAA+AGG | - | chr7_1:77517690-77517709 | Msa1040160:intron | 40.0% |
| GTTTACCTTCAACTCCTCAA+GGG | + | chr7_1:77517721-77517740 | None:intergenic | 40.0% | |
| TGTTTACCTTCAACTCCTCA+AGG | + | chr7_1:77517722-77517741 | None:intergenic | 40.0% | |
| ! | TGTATTGGTGTGGATTGCAA+AGG | + | chr7_1:77518136-77518155 | None:intergenic | 40.0% |
| TTGCAATCCACACCAATACA+TGG | - | chr7_1:77518136-77518155 | Msa1040160:intron | 40.0% | |
| GCAAACGCAATTCCATGTAT+TGG | + | chr7_1:77518151-77518170 | None:intergenic | 40.0% | |
| ACTTGACAACAGGTTTGTAC+TGG | + | chr7_1:77518191-77518210 | None:intergenic | 40.0% | |
| AGTACAAACCTGTTGTCAAG+TGG | - | chr7_1:77518190-77518209 | Msa1040160:intron | 40.0% | |
| AATACTCCATATGGACAGGT+TGG | + | chr7_1:77518217-77518236 | None:intergenic | 40.0% | |
| ! | AATTGGCTAGCCAATCCTAT+AGG | + | chr7_1:77518244-77518263 | None:intergenic | 40.0% |
| !!! | TGTTTTTTAAGGCCTATGGC+TGG | - | chr7_1:77518274-77518293 | Msa1040160:intron | 40.0% |
| TGATTGTCAGGGTTCCTAAA+CGG | + | chr7_1:77518314-77518333 | None:intergenic | 40.0% | |
| AAAACTCTTAAAACCGGGCA+GGG | + | chr7_1:77518352-77518371 | None:intergenic | 40.0% | |
| AAAAACTCTTAAAACCGGGC+AGG | + | chr7_1:77518353-77518372 | None:intergenic | 40.0% | |
| !! | GTAGATTTTGATGGTCATGC+TGG | + | chr7_1:77518385-77518404 | None:intergenic | 40.0% |
| GGTCAAGGTAATGCAAATTG+CGG | - | chr7_1:77518898-77518917 | Msa1040160:CDS | 40.0% | |
| !!! | TGGCCCTGTTTTTTATTTCC+AGG | - | chr7_1:77519019-77519038 | Msa1040160:intron | 40.0% |
| CCAGCCTGGAAATAAAAAAC+AGG | + | chr7_1:77519026-77519045 | None:intergenic | 40.0% | |
| !!! | CCTGTTTTTTATTTCCAGGC+TGG | - | chr7_1:77519023-77519042 | Msa1040160:intron | 40.0% |
| CGAACAAACAAACGCCATTT+GGG | - | chr7_1:77519191-77519210 | Msa1040160:intron | 40.0% | |
| GTCTGCAGAAAAAGACTTGA+TGG | + | chr7_1:77519466-77519485 | None:intergenic | 40.0% | |
| AAGGAGAAGGTGAGAGAATG+AGG | + | chr7_1:77516865-77516884 | None:intergenic | 45.0% | |
| !!! | CTTGGTGCTTTTCTCGGATT+CGG | - | chr7_1:77516904-77516923 | Msa1040160:three_prime_UTR | 45.0% |
| ! | GCTTTTCTCGGATTCGGATT+CGG | - | chr7_1:77516910-77516929 | Msa1040160:three_prime_UTR | 45.0% |
| TGGCAAAGCTCAACCATTGA+TGG | - | chr7_1:77516974-77516993 | Msa1040160:three_prime_UTR | 45.0% | |
| !! | ATTGGTGCCAAACACATGGA+TGG | + | chr7_1:77517110-77517129 | None:intergenic | 45.0% |
| !! | ACGAATTGGTGCCAAACACA+TGG | + | chr7_1:77517114-77517133 | None:intergenic | 45.0% |
| ATTCATCATAGGGTGACTGC+AGG | - | chr7_1:77517192-77517211 | Msa1040160:CDS | 45.0% | |
| ! | GAAAAGCGGATTCGGATTCA+CGG | + | chr7_1:77517230-77517249 | None:intergenic | 45.0% |
| !! | GCTTGCGGAAGTGTTCATTA+GGG | + | chr7_1:77517405-77517424 | None:intergenic | 45.0% |
| !! | TGCTTGCGGAAGTGTTCATT+AGG | + | chr7_1:77517406-77517425 | None:intergenic | 45.0% |
| ATGAACACTTCCGCAAGCAT+TGG | - | chr7_1:77517407-77517426 | Msa1040160:intron | 45.0% | |
| CATGGTTTAACCAACCTGCA+AGG | - | chr7_1:77517446-77517465 | Msa1040160:intron | 45.0% | |
| AGGCCTTGGGAAAATCTTCA+CGG | + | chr7_1:77517619-77517638 | None:intergenic | 45.0% | |
| ! | CGCAATTCCATGTATTGGTG+TGG | + | chr7_1:77518146-77518165 | None:intergenic | 45.0% |
| CCTAAACGGCATACGAGTTA+AGG | + | chr7_1:77518300-77518319 | None:intergenic | 45.0% | |
| ! | CCTTAACTCGTATGCCGTTT+AGG | - | chr7_1:77518297-77518316 | Msa1040160:intron | 45.0% |
| CACCAATCTCCAATGTACGT+AGG | - | chr7_1:77518441-77518460 | Msa1040160:intron | 45.0% | |
| CACCTACGTACATTGGAGAT+TGG | + | chr7_1:77518446-77518465 | None:intergenic | 45.0% | |
| GAAGACATACAAGGCCAAGT+TGG | - | chr7_1:77518850-77518869 | Msa1040160:intron | 45.0% | |
| ! | ATTTGCTAGTTCCTCAGGAG+TGG | + | chr7_1:77519054-77519073 | None:intergenic | 45.0% |
| ! | GTAGCATTTGCTAGTTCCTC+AGG | + | chr7_1:77519059-77519078 | None:intergenic | 45.0% |
| GGAACTAGCAAATGCTACAC+AGG | - | chr7_1:77519061-77519080 | Msa1040160:intron | 45.0% | |
| GCAAATGCTACACAGGTTCA+AGG | - | chr7_1:77519068-77519087 | Msa1040160:intron | 45.0% | |
| GCGAACAAACAAACGCCATT+TGG | - | chr7_1:77519190-77519209 | Msa1040160:intron | 45.0% | |
| ! | GGAGCAGCTGAAGAGTATAG+TGG | + | chr7_1:77516819-77516838 | None:intergenic | 50.0% |
| ! | GTGAGAGAATGAGGTACCTG+CGG | + | chr7_1:77516856-77516875 | None:intergenic | 50.0% |
| CTCGGATTCGGATTCGGATT+CGG | - | chr7_1:77516916-77516935 | Msa1040160:three_prime_UTR | 50.0% | |
| CGGATTCGGATTCGGATTCA+CGG | - | chr7_1:77516924-77516943 | Msa1040160:three_prime_UTR | 50.0% | |
| !! | TGGAGCGCTGGATTCATCAT+AGG | - | chr7_1:77517181-77517200 | Msa1040160:CDS | 50.0% |
| !! | GGAGCGCTGGATTCATCATA+GGG | - | chr7_1:77517182-77517201 | Msa1040160:CDS | 50.0% |
| TTCTCGTCTTCCTTGCAGGT+TGG | + | chr7_1:77517459-77517478 | None:intergenic | 50.0% | |
| AGGAAGACGAGAAGACGCTT+AGG | - | chr7_1:77517466-77517485 | Msa1040160:intron | 50.0% | |
| ! | AGGCCGTGAAGATTTTCCCA+AGG | - | chr7_1:77517613-77517632 | Msa1040160:intron | 50.0% |
| ! | ATTTTCCCAAGGCCTACAGC+TGG | - | chr7_1:77517624-77517643 | Msa1040160:intron | 50.0% |
| CCATGAACAATAGGCCTGAG+TGG | + | chr7_1:77517651-77517670 | None:intergenic | 50.0% | |
| CCACTCAGGCCTATTGTTCA+TGG | - | chr7_1:77517648-77517667 | Msa1040160:intron | 50.0% | |
| TGGTAAAGGCTTCTCCCTTG+AGG | - | chr7_1:77517704-77517723 | Msa1040160:intron | 50.0% | |
| CTTCTCCCTTGAGGAGTTGA+AGG | - | chr7_1:77517713-77517732 | Msa1040160:intron | 50.0% | |
| ! | AGGTTGGTCCACTTGACAAC+AGG | + | chr7_1:77518201-77518220 | None:intergenic | 50.0% |
| AGTGGACCAACCTGTCCATA+TGG | - | chr7_1:77518208-77518227 | Msa1040160:intron | 50.0% | |
| TACGAGTTAAGGCCAGCCAT+AGG | + | chr7_1:77518289-77518308 | None:intergenic | 50.0% | |
| TTATAGGTCTATGCCCTGCC+CGG | - | chr7_1:77518336-77518355 | Msa1040160:intron | 50.0% | |
| GGAGGTTCACCTACGTACAT+TGG | + | chr7_1:77518453-77518472 | None:intergenic | 50.0% | |
| ! | CTTCCAAGGATCGGTTCTTG+CGG | + | chr7_1:77518805-77518824 | None:intergenic | 50.0% |
| CTTGCAGACCTTCCAAGGAT+CGG | + | chr7_1:77518814-77518833 | None:intergenic | 50.0% | |
| GCAGAGGCTGAAGACATACA+AGG | - | chr7_1:77518841-77518860 | Msa1040160:intron | 50.0% | |
| TCTTGGGAAGACGACCAACT+TGG | + | chr7_1:77518867-77518886 | None:intergenic | 50.0% | |
| GATGGCTTCTCCCTCACAAT+TGG | + | chr7_1:77519104-77519123 | None:intergenic | 50.0% | |
| TCTTCAGTCTGGCACCCAAA+TGG | + | chr7_1:77519208-77519227 | None:intergenic | 50.0% | |
| ATTTGGGTGCCAGACTGAAG+AGG | - | chr7_1:77519207-77519226 | Msa1040160:intron | 50.0% | |
| TTTGGGTGCCAGACTGAAGA+GGG | - | chr7_1:77519208-77519227 | Msa1040160:intron | 50.0% | |
| CTTGTCTTCCTTCTCTGCCT+CGG | + | chr7_1:77519237-77519256 | None:intergenic | 50.0% | |
| GGGGAAATGATATGGAGCGC+TGG | - | chr7_1:77517169-77517188 | Msa1040160:CDS | 55.0% | |
| CGTCTTCTCGTCTTCCTTGC+AGG | + | chr7_1:77517463-77517482 | None:intergenic | 55.0% | |
| CGCAAGAACCGATCCTTGGA+AGG | - | chr7_1:77518803-77518822 | Msa1040160:intron | 55.0% | |
| !! | GTTGGCTTGCAGACCTTCCA+AGG | + | chr7_1:77518819-77518838 | None:intergenic | 55.0% |
| TGTCTTCAGCCTCTGCACGT+TGG | + | chr7_1:77518837-77518856 | None:intergenic | 55.0% | |
| TGACCTTGCGTGCACGTCTT+GGG | + | chr7_1:77518883-77518902 | None:intergenic | 55.0% | |
| TTGACCTTGCGTGCACGTCT+TGG | + | chr7_1:77518884-77518903 | None:intergenic | 55.0% | |
| AAGACGTGCACGCAAGGTCA+AGG | - | chr7_1:77518883-77518902 | Msa1040160:intron | 55.0% | |
| ! | GTGGGCACTGCTGCCATCAA+TGG | + | chr7_1:77516990-77517009 | None:intergenic | 60.0% |
| GTGGTCCAGCTGTAGGCCTT+GGG | + | chr7_1:77517632-77517651 | None:intergenic | 60.0% | |
| AGTGGTCCAGCTGTAGGCCT+TGG | + | chr7_1:77517633-77517652 | None:intergenic | 60.0% | |
| TCGCCGCAAGAACCGATCCT+TGG | - | chr7_1:77518799-77518818 | Msa1040160:intron | 60.0% | |
| GTCTGCAAGCCAACGTGCAG+AGG | - | chr7_1:77518825-77518844 | Msa1040160:intron | 60.0% | |
| CTTCCCAAGACGTGCACGCA+AGG | - | chr7_1:77518877-77518896 | Msa1040160:intron | 60.0% | |
| CAGGAGTGGAATCACCAGCC+TGG | + | chr7_1:77519040-77519059 | None:intergenic | 60.0% | |
| GGCTGGTGATTCCACTCCTG+AGG | - | chr7_1:77519040-77519059 | Msa1040160:intron | 60.0% | |
| CCTGCGGCGATTTCACGAGC+AGG | + | chr7_1:77516840-77516859 | None:intergenic | 65.0% | |
| CCTGCTCGTGAAATCGCCGC+AGG | - | chr7_1:77516837-77516856 | Msa1040160:three_prime_UTR | 65.0% | |
| GGCCTACAGCTGGACCACTC+AGG | - | chr7_1:77517634-77517653 | Msa1040160:intron | 65.0% | |
| GGCCTGAGTGGTCCAGCTGT+AGG | + | chr7_1:77517639-77517658 | None:intergenic | 65.0% | |
| CTCGGCAGCCCTCTTCAGTC+TGG | + | chr7_1:77519219-77519238 | None:intergenic | 65.0% | |
| CAGACTGAAGAGGGCTGCCG+AGG | - | chr7_1:77519217-77519236 | Msa1040160:intron | 65.0% | |
| GAGGGCTGCCGAGGCAGAGA+AGG | - | chr7_1:77519226-77519245 | Msa1040160:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 77516801 | 77519576 | 77516801 | ID=Msa1040160;Name=Msa1040160 |
| chr7_1 | mRNA | 77516801 | 77519576 | 77516801 | ID=Msa1040160-mRNA-1;Parent=Msa1040160;Name=Msa1040160-mRNA-1;_AED=0.07;_eAED=0.07;_QI=70|1|1|1|0.6|0.33|6|292|207 |
| chr7_1 | exon | 77516801 | 77516859 | 77516801 | ID=Msa1040160-mRNA-1:exon:20470;Parent=Msa1040160-mRNA-1 |
| chr7_1 | exon | 77516882 | 77517336 | 77516882 | ID=Msa1040160-mRNA-1:exon:20469;Parent=Msa1040160-mRNA-1 |
| chr7_1 | exon | 77517473 | 77517631 | 77517473 | ID=Msa1040160-mRNA-1:exon:20468;Parent=Msa1040160-mRNA-1 |
| chr7_1 | exon | 77518643 | 77518776 | 77518643 | ID=Msa1040160-mRNA-1:exon:20467;Parent=Msa1040160-mRNA-1 |
| chr7_1 | exon | 77518890 | 77519010 | 77518890 | ID=Msa1040160-mRNA-1:exon:20466;Parent=Msa1040160-mRNA-1 |
| chr7_1 | exon | 77519519 | 77519576 | 77519519 | ID=Msa1040160-mRNA-1:exon:20465;Parent=Msa1040160-mRNA-1 |
| chr7_1 | five_prime_UTR | 77519519 | 77519576 | 77519519 | ID=Msa1040160-mRNA-1:five_prime_utr;Parent=Msa1040160-mRNA-1 |
| chr7_1 | five_prime_UTR | 77518999 | 77519010 | 77518999 | ID=Msa1040160-mRNA-1:five_prime_utr;Parent=Msa1040160-mRNA-1 |
| chr7_1 | CDS | 77518890 | 77518998 | 77518890 | ID=Msa1040160-mRNA-1:cds;Parent=Msa1040160-mRNA-1 |
| chr7_1 | CDS | 77518643 | 77518776 | 77518643 | ID=Msa1040160-mRNA-1:cds;Parent=Msa1040160-mRNA-1 |
| chr7_1 | CDS | 77517473 | 77517631 | 77517473 | ID=Msa1040160-mRNA-1:cds;Parent=Msa1040160-mRNA-1 |
| chr7_1 | CDS | 77517115 | 77517336 | 77517115 | ID=Msa1040160-mRNA-1:cds;Parent=Msa1040160-mRNA-1 |
| chr7_1 | three_prime_UTR | 77516882 | 77517114 | 77516882 | ID=Msa1040160-mRNA-1:three_prime_utr;Parent=Msa1040160-mRNA-1 |
| chr7_1 | three_prime_UTR | 77516801 | 77516859 | 77516801 | ID=Msa1040160-mRNA-1:three_prime_utr;Parent=Msa1040160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
