Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1360280 | XP_024633177.1 | 95.290 | 637 | 29 | 1 | 1 | 636 | 1 | 637 | 0.0 | 1192 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1360280 | sp|Q9M817|PTR6_ARATH | 54.766 | 577 | 254 | 6 | 15 | 585 | 9 | 584 | 0.0 | 655 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1360280 | Q2HU41 | 95.290 | 637 | 29 | 1 | 1 | 636 | 1 | 637 | 0.0 | 1192 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000490 | Msa1360280 | -0.871213 | 8.107945e-67 | -8.615850e-47 |
Msa0003560 | Msa1360280 | 0.822210 | 2.675133e-53 | -8.615850e-47 |
Msa0036370 | Msa1360280 | 0.820008 | 8.604928e-53 | -8.615850e-47 |
Msa0038020 | Msa1360280 | 0.823050 | 1.706764e-53 | -8.615850e-47 |
Msa0072170 | Msa1360280 | 0.870907 | 1.023001e-66 | -8.615850e-47 |
Msa0085720 | Msa1360280 | 0.853967 | 1.683631e-61 | -8.615850e-47 |
Msa0090030 | Msa1360280 | 0.819271 | 1.267684e-52 | -8.615850e-47 |
Msa0120540 | Msa1360280 | 0.868769 | 5.103352e-66 | -8.615850e-47 |
Msa1350690 | Msa1360280 | 0.965641 | 7.197642e-125 | -8.615850e-47 |
Msa1360240 | Msa1360280 | 0.828230 | 1.008914e-54 | -8.615850e-47 |
Msa1360280 | Msa1363700 | 0.818144 | 2.285394e-52 | -8.615850e-47 |
Msa1360280 | Msa1373800 | 0.806730 | 7.137650e-50 | -8.615850e-47 |
Msa1360280 | Msa1375700 | -0.801744 | 7.791205e-49 | -8.615850e-47 |
Msa1360280 | Msa1383480 | 0.850644 | 1.486059e-60 | -8.615850e-47 |
Msa1360280 | Msa1393800 | 0.801671 | 8.064424e-49 | -8.615850e-47 |
Msa1360280 | Msa1415920 | 0.802911 | 4.480577e-49 | -8.615850e-47 |
Msa1360280 | Msa1422840 | 0.836428 | 9.410656e-57 | -8.615850e-47 |
Msa1360280 | Msa1442220 | -0.814856 | 1.244670e-51 | -8.615850e-47 |
Msa1360280 | Msa1454110 | 0.803146 | 4.007535e-49 | -8.615850e-47 |
Msa1360280 | Msa1459760 | -0.809237 | 2.089439e-50 | -8.615850e-47 |
Msa1360280 | Msa1465960 | 0.800343 | 1.507176e-48 | -8.615850e-47 |
Msa0609970 | Msa1360280 | 0.858049 | 1.075789e-62 | -8.615850e-47 |
Msa0614990 | Msa1360280 | 0.867507 | 1.300984e-65 | -8.615850e-47 |
Msa0621240 | Msa1360280 | 0.801440 | 8.997055e-49 | -8.615850e-47 |
Msa0622340 | Msa1360280 | 0.804146 | 2.484953e-49 | -8.615850e-47 |
Msa0626680 | Msa1360280 | 0.804718 | 1.887931e-49 | -8.615850e-47 |
Msa0643250 | Msa1360280 | 0.813951 | 1.973565e-51 | -8.615850e-47 |
Msa0649410 | Msa1360280 | 0.800444 | 1.436957e-48 | -8.615850e-47 |
Msa0650620 | Msa1360280 | 0.837993 | 3.743385e-57 | -8.615850e-47 |
Msa0650730 | Msa1360280 | 0.803892 | 2.806213e-49 | -8.615850e-47 |
Msa0653320 | Msa1360280 | -0.829980 | 3.798461e-55 | -8.615850e-47 |
Msa0664760 | Msa1360280 | 0.814611 | 1.410571e-51 | -8.615850e-47 |
Msa0679550 | Msa1360280 | 0.824233 | 9.019699e-54 | -8.615850e-47 |
Msa0724560 | Msa1360280 | 0.834165 | 3.510158e-56 | -8.615850e-47 |
Msa0755080 | Msa1360280 | 0.824706 | 6.980461e-54 | -8.615850e-47 |
Msa0796950 | Msa1360280 | 0.811727 | 6.058072e-51 | -8.615850e-47 |
Msa0799060 | Msa1360280 | 0.807002 | 6.252296e-50 | -8.615850e-47 |
Msa0820530 | Msa1360280 | -0.818300 | 2.106716e-52 | -8.615850e-47 |
Msa0834450 | Msa1360280 | 0.830289 | 3.193648e-55 | -8.615850e-47 |
Msa0140170 | Msa1360280 | 0.833545 | 5.016085e-56 | -8.615850e-47 |
Msa0140400 | Msa1360280 | 0.809998 | 1.433893e-50 | -8.615850e-47 |
Msa0140520 | Msa1360280 | -0.817056 | 4.018678e-52 | -8.615850e-47 |
Msa0163780 | Msa1360280 | 0.800326 | 1.519016e-48 | -8.615850e-47 |
Msa0173330 | Msa1360280 | 0.816286 | 5.979928e-52 | -8.615850e-47 |
Msa0175050 | Msa1360280 | 0.823046 | 1.709994e-53 | -8.615850e-47 |
Msa0194720 | Msa1360280 | 0.824540 | 7.637251e-54 | -8.615850e-47 |
Msa0198940 | Msa1360280 | 0.814637 | 1.391951e-51 | -8.615850e-47 |
Msa0223100 | Msa1360280 | 0.800656 | 1.301292e-48 | -8.615850e-47 |
Msa0223290 | Msa1360280 | 0.809344 | 1.981824e-50 | -8.615850e-47 |
Msa0223380 | Msa1360280 | 0.806609 | 7.569991e-50 | -8.615850e-47 |
Msa1229850 | Msa1360280 | 0.870306 | 1.611830e-66 | -8.615850e-47 |
Msa1235400 | Msa1360280 | 0.823675 | 1.219407e-53 | -8.615850e-47 |
Msa1236070 | Msa1360280 | -0.808455 | 3.071614e-50 | -8.615850e-47 |
Msa1241800 | Msa1360280 | 0.811517 | 6.730321e-51 | -8.615850e-47 |
Msa1272520 | Msa1360280 | 0.888877 | 3.997053e-73 | -8.615850e-47 |
Msa1280620 | Msa1360280 | 0.801790 | 7.626413e-49 | -8.615850e-47 |
Msa1300860 | Msa1360280 | 0.827909 | 1.205642e-54 | -8.615850e-47 |
Msa1307740 | Msa1360280 | 0.825125 | 5.558656e-54 | -8.615850e-47 |
Msa1310660 | Msa1360280 | 0.885030 | 1.155438e-71 | -8.615850e-47 |
Msa1314770 | Msa1360280 | 0.833595 | 4.872861e-56 | -8.615850e-47 |
Msa1338610 | Msa1360280 | 0.824551 | 7.590450e-54 | -8.615850e-47 |
Msa0370310 | Msa1360280 | 0.828417 | 9.095282e-55 | -8.615850e-47 |
Msa0370870 | Msa1360280 | 0.803797 | 2.936748e-49 | -8.615850e-47 |
Msa0377530 | Msa1360280 | 0.813560 | 2.406310e-51 | -8.615850e-47 |
Msa0381220 | Msa1360280 | 0.805295 | 1.430280e-49 | -8.615850e-47 |
Msa0384540 | Msa1360280 | 0.802373 | 5.784448e-49 | -8.615850e-47 |
Msa0387910 | Msa1360280 | 0.846670 | 1.876803e-59 | -8.615850e-47 |
Msa0389810 | Msa1360280 | 0.815633 | 8.366474e-52 | -8.615850e-47 |
Msa0404700 | Msa1360280 | 0.866223 | 3.335762e-65 | -8.615850e-47 |
Msa0416320 | Msa1360280 | 0.850111 | 2.096996e-60 | -8.615850e-47 |
Msa0419640 | Msa1360280 | -0.805867 | 1.084928e-49 | -8.615850e-47 |
Msa0421260 | Msa1360280 | 0.830639 | 2.621857e-55 | -8.615850e-47 |
Msa0426810 | Msa1360280 | 0.843019 | 1.812095e-58 | -8.615850e-47 |
Msa0431020 | Msa1360280 | 0.811812 | 5.804116e-51 | -8.615850e-47 |
Msa0462540 | Msa1360280 | 0.843830 | 1.100489e-58 | -8.615850e-47 |
Msa0464900 | Msa1360280 | 0.813924 | 2.000644e-51 | -8.615850e-47 |
Msa0467220 | Msa1360280 | 0.827007 | 1.984218e-54 | -8.615850e-47 |
Msa0468130 | Msa1360280 | 0.831182 | 1.929997e-55 | -8.615850e-47 |
Msa0469910 | Msa1360280 | -0.804970 | 1.672818e-49 | -8.615850e-47 |
Msa0982270 | Msa1360280 | 0.807191 | 5.702967e-50 | -8.615850e-47 |
Msa0982590 | Msa1360280 | 0.824437 | 8.077016e-54 | -8.615850e-47 |
Msa0993530 | Msa1360280 | 0.804400 | 2.199483e-49 | -8.615850e-47 |
Msa1032640 | Msa1360280 | 0.810899 | 9.162774e-51 | -8.615850e-47 |
Msa1048700 | Msa1360280 | 0.807555 | 4.773088e-50 | -8.615850e-47 |
Msa1088290 | Msa1360280 | 0.828256 | 9.949008e-55 | -8.615850e-47 |
Msa1092090 | Msa1360280 | 0.807871 | 4.089176e-50 | -8.615850e-47 |
Msa0239940 | Msa1360280 | 0.818640 | 1.764027e-52 | -8.615850e-47 |
Msa0241740 | Msa1360280 | 0.807499 | 4.907339e-50 | -8.615850e-47 |
Msa0252240 | Msa1360280 | 0.834077 | 3.692444e-56 | -8.615850e-47 |
Msa0266210 | Msa1360280 | 0.960931 | 4.055969e-119 | -8.615850e-47 |
Msa0266240 | Msa1360280 | 0.826198 | 3.093658e-54 | -8.615850e-47 |
Msa0275400 | Msa1360280 | -0.815372 | 9.563860e-52 | -8.615850e-47 |
Msa0287670 | Msa1360280 | 0.965789 | 4.617931e-125 | -8.615850e-47 |
Msa0289400 | Msa1360280 | 0.829006 | 6.550920e-55 | -8.615850e-47 |
Msa0302650 | Msa1360280 | 0.826903 | 2.100591e-54 | -8.615850e-47 |
Msa0304700 | Msa1360280 | 0.801752 | 7.763610e-49 | -8.615850e-47 |
Msa0308200 | Msa1360280 | 0.822620 | 2.148981e-53 | -8.615850e-47 |
Msa0308220 | Msa1360280 | 0.809188 | 2.140728e-50 | -8.615850e-47 |
Msa0312310 | Msa1360280 | 0.817149 | 3.829382e-52 | -8.615850e-47 |
Msa0327410 | Msa1360280 | 0.811666 | 6.245041e-51 | -8.615850e-47 |
Msa0362060 | Msa1360280 | 0.873716 | 1.185557e-67 | -8.615850e-47 |
Msa0363100 | Msa1360280 | 0.838559 | 2.676404e-57 | -8.615850e-47 |
Msa0363170 | Msa1360280 | 0.857850 | 1.232358e-62 | -8.615850e-47 |
Msa1130210 | Msa1360280 | -0.830319 | 3.139686e-55 | -8.615850e-47 |
Msa1174310 | Msa1360280 | 0.846219 | 2.491463e-59 | -8.615850e-47 |
Msa1182640 | Msa1360280 | 0.888271 | 6.843481e-73 | -8.615850e-47 |
Msa1218650 | Msa1360280 | 0.808045 | 3.755221e-50 | -8.615850e-47 |
Msa0491500 | Msa1360280 | 0.803314 | 3.698105e-49 | -8.615850e-47 |
Msa0491520 | Msa1360280 | 0.830090 | 3.570775e-55 | -8.615850e-47 |
Msa0493920 | Msa1360280 | 0.812428 | 4.260217e-51 | -8.615850e-47 |
Msa0505060 | Msa1360280 | 0.820970 | 5.175012e-53 | -8.615850e-47 |
Msa0508540 | Msa1360280 | 0.804977 | 1.666741e-49 | -8.615850e-47 |
Msa0517490 | Msa1360280 | 0.803277 | 3.763405e-49 | -8.615850e-47 |
Msa0519390 | Msa1360280 | 0.830570 | 2.726294e-55 | -8.615850e-47 |
Msa0547400 | Msa1360280 | 0.806685 | 7.297100e-50 | -8.615850e-47 |
Msa0557950 | Msa1360280 | -0.817919 | 2.568345e-52 | -8.615850e-47 |
Msa0578090 | Msa1360280 | 0.812474 | 4.162932e-51 | -8.615850e-47 |
Msa0579350 | Msa1360280 | 0.812229 | 4.709125e-51 | -8.615850e-47 |
Msa0579370 | Msa1360280 | 0.863874 | 1.823284e-64 | -8.615850e-47 |
Msa0587190 | Msa1360280 | 0.802537 | 5.352490e-49 | -8.615850e-47 |
Msa0598560 | Msa1360280 | 0.846951 | 1.572292e-59 | -8.615850e-47 |
Msa0848900 | Msa1360280 | 0.824313 | 8.635512e-54 | -8.615850e-47 |
Msa0866800 | Msa1360280 | 0.820910 | 5.342895e-53 | -8.615850e-47 |
Msa0876860 | Msa1360280 | -0.811146 | 8.100774e-51 | -8.615850e-47 |
Msa0908170 | Msa1360280 | 0.812482 | 4.146198e-51 | -8.615850e-47 |
Msa0944730 | Msa1360280 | 0.860707 | 1.712002e-63 | -8.615850e-47 |
Msa0945100 | Msa1360280 | 0.800237 | 1.583863e-48 | -8.615850e-47 |
Msa0946080 | Msa1360280 | 0.801457 | 8.925262e-49 | -8.615850e-47 |
Msa0959010 | Msa1360280 | 0.804704 | 1.901028e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1360280 | MtrunA17_Chr2g0331461 | 95.290 | 637 | 29 | 1 | 1 | 636 | 1 | 637 | 0.0 | 1192 |
Msa1360280 | MtrunA17_Chr2g0331481 | 84.434 | 636 | 99 | 0 | 1 | 636 | 1 | 636 | 0.0 | 1098 |
Msa1360280 | MtrunA17_Chr2g0331471 | 83.019 | 636 | 107 | 1 | 1 | 636 | 65 | 699 | 0.0 | 1079 |
Msa1360280 | MtrunA17_Chr2g0331511 | 78.840 | 638 | 122 | 5 | 1 | 636 | 1 | 627 | 0.0 | 1040 |
Msa1360280 | MtrunA17_Chr4g0003761 | 66.611 | 599 | 187 | 6 | 1 | 592 | 1 | 593 | 0.0 | 813 |
Msa1360280 | MtrunA17_Chr1g0177591 | 67.826 | 575 | 160 | 5 | 1 | 575 | 24 | 573 | 0.0 | 798 |
Msa1360280 | MtrunA17_Chr2g0331521 | 55.651 | 584 | 248 | 6 | 1 | 580 | 1 | 577 | 0.0 | 682 |
Msa1360280 | MtrunA17_Chr1g0177611 | 68.035 | 463 | 129 | 3 | 113 | 575 | 1 | 444 | 0.0 | 655 |
Msa1360280 | MtrunA17_Chr1g0177631 | 68.683 | 463 | 126 | 3 | 113 | 575 | 1 | 444 | 0.0 | 640 |
Msa1360280 | MtrunA17_Chr8g0390331 | 46.632 | 579 | 296 | 6 | 16 | 586 | 6 | 579 | 0.0 | 533 |
Msa1360280 | MtrunA17_Chr1g0147631 | 47.804 | 592 | 292 | 8 | 5 | 584 | 1 | 587 | 3.22e-178 | 518 |
Msa1360280 | MtrunA17_Chr1g0157601 | 46.333 | 559 | 286 | 7 | 14 | 568 | 7 | 555 | 1.13e-176 | 513 |
Msa1360280 | MtrunA17_Chr1g0157611 | 47.405 | 578 | 283 | 9 | 14 | 586 | 8 | 569 | 8.88e-172 | 501 |
Msa1360280 | MtrunA17_Chr1g0157621 | 45.735 | 551 | 282 | 8 | 46 | 592 | 1 | 538 | 7.92e-158 | 465 |
Msa1360280 | MtrunA17_Chr5g0415791 | 36.286 | 587 | 349 | 11 | 15 | 585 | 19 | 596 | 2.65e-127 | 388 |
Msa1360280 | MtrunA17_Chr4g0059991 | 35.140 | 609 | 364 | 11 | 9 | 602 | 7 | 599 | 1.87e-123 | 378 |
Msa1360280 | MtrunA17_Chr4g0059971 | 36.637 | 565 | 346 | 7 | 11 | 566 | 20 | 581 | 2.82e-122 | 375 |
Msa1360280 | MtrunA17_Chr5g0422881 | 34.179 | 591 | 369 | 9 | 8 | 589 | 3 | 582 | 1.01e-118 | 365 |
Msa1360280 | MtrunA17_Chr7g0255601 | 34.483 | 580 | 355 | 12 | 15 | 580 | 17 | 585 | 7.59e-116 | 359 |
Msa1360280 | MtrunA17_Chr4g0059981 | 34.465 | 589 | 364 | 12 | 14 | 583 | 15 | 600 | 1.03e-113 | 353 |
Msa1360280 | MtrunA17_Chr7g0255611 | 32.945 | 601 | 378 | 12 | 10 | 598 | 14 | 601 | 1.51e-113 | 352 |
Msa1360280 | MtrunA17_Chr7g0255621 | 32.727 | 605 | 380 | 12 | 17 | 611 | 12 | 599 | 2.62e-113 | 352 |
Msa1360280 | MtrunA17_Chr8g0362781 | 34.744 | 567 | 351 | 11 | 14 | 566 | 17 | 578 | 3.97e-109 | 340 |
Msa1360280 | MtrunA17_Chr8g0375311 | 35.273 | 550 | 338 | 9 | 25 | 566 | 40 | 579 | 8.83e-108 | 337 |
Msa1360280 | MtrunA17_Chr8g0375321 | 33.391 | 581 | 365 | 9 | 2 | 568 | 6 | 578 | 5.06e-104 | 327 |
Msa1360280 | MtrunA17_Chr8g0375291 | 34.552 | 547 | 336 | 11 | 25 | 561 | 40 | 574 | 4.02e-103 | 325 |
Msa1360280 | MtrunA17_Chr3g0104011 | 34.601 | 552 | 338 | 12 | 25 | 566 | 22 | 560 | 5.58e-102 | 322 |
Msa1360280 | MtrunA17_Chr8g0375351 | 33.273 | 556 | 351 | 9 | 21 | 566 | 34 | 579 | 2.06e-101 | 320 |
Msa1360280 | MtrunA17_Chr8g0375341 | 32.671 | 554 | 357 | 8 | 21 | 566 | 34 | 579 | 1.49e-97 | 310 |
Msa1360280 | MtrunA17_Chr4g0060001 | 31.667 | 600 | 385 | 12 | 14 | 601 | 18 | 604 | 2.44e-97 | 310 |
Msa1360280 | MtrunA17_Chr8g0375331 | 33.977 | 518 | 324 | 8 | 35 | 544 | 34 | 541 | 5.34e-96 | 306 |
Msa1360280 | MtrunA17_Chr4g0005901 | 33.877 | 552 | 340 | 12 | 25 | 566 | 32 | 568 | 6.75e-96 | 306 |
Msa1360280 | MtrunA17_Chr8g0362801 | 36.052 | 466 | 278 | 9 | 113 | 566 | 1 | 458 | 1.81e-95 | 301 |
Msa1360280 | MtrunA17_Chr7g0241741 | 32.743 | 565 | 346 | 11 | 15 | 560 | 3 | 552 | 3.57e-94 | 301 |
Msa1360280 | MtrunA17_Chr7g0240271 | 30.283 | 601 | 382 | 12 | 14 | 592 | 3 | 588 | 2.92e-92 | 296 |
Msa1360280 | MtrunA17_Chr8g0375361 | 33.333 | 552 | 346 | 10 | 25 | 566 | 39 | 578 | 3.91e-92 | 296 |
Msa1360280 | MtrunA17_Chr7g0240281 | 31.034 | 580 | 373 | 13 | 25 | 589 | 24 | 591 | 1.21e-90 | 292 |
Msa1360280 | MtrunA17_Chr5g0399061 | 31.162 | 568 | 364 | 15 | 25 | 579 | 26 | 579 | 2.52e-88 | 286 |
Msa1360280 | MtrunA17_Chr3g0142091 | 33.058 | 605 | 361 | 14 | 2 | 594 | 3 | 575 | 5.72e-88 | 285 |
Msa1360280 | MtrunA17_Chr3g0142101 | 32.297 | 579 | 352 | 12 | 25 | 594 | 35 | 582 | 8.43e-87 | 282 |
Msa1360280 | MtrunA17_Chr2g0325951 | 33.735 | 581 | 333 | 16 | 1 | 566 | 1 | 544 | 6.84e-86 | 279 |
Msa1360280 | MtrunA17_Chr2g0325961 | 33.564 | 578 | 339 | 14 | 1 | 566 | 1 | 545 | 6.28e-85 | 276 |
Msa1360280 | MtrunA17_Chr2g0326211 | 34.242 | 587 | 322 | 17 | 1 | 566 | 1 | 544 | 4.03e-84 | 274 |
Msa1360280 | MtrunA17_Chr7g0214731 | 32.378 | 593 | 353 | 15 | 29 | 592 | 65 | 638 | 1.20e-83 | 275 |
Msa1360280 | MtrunA17_Chr7g0261811 | 31.389 | 583 | 363 | 13 | 36 | 600 | 38 | 601 | 1.02e-82 | 272 |
Msa1360280 | MtrunA17_Chr5g0399071 | 29.371 | 572 | 367 | 13 | 14 | 566 | 14 | 567 | 6.09e-82 | 270 |
Msa1360280 | MtrunA17_Chr7g0261851 | 31.311 | 610 | 379 | 16 | 11 | 604 | 12 | 597 | 3.22e-81 | 268 |
Msa1360280 | MtrunA17_Chr4g0014781 | 31.469 | 572 | 352 | 14 | 4 | 566 | 10 | 550 | 3.42e-81 | 266 |
Msa1360280 | MtrunA17_Chr5g0415841 | 32.833 | 466 | 291 | 11 | 113 | 566 | 1 | 456 | 9.18e-81 | 263 |
Msa1360280 | MtrunA17_Chr4g0014871 | 31.185 | 574 | 359 | 13 | 2 | 566 | 6 | 552 | 9.94e-81 | 265 |
Msa1360280 | MtrunA17_Chr1g0187241 | 30.503 | 577 | 367 | 13 | 26 | 585 | 26 | 585 | 2.74e-80 | 265 |
Msa1360280 | MtrunA17_Chr3g0112671 | 29.519 | 603 | 386 | 13 | 1 | 589 | 1 | 578 | 3.54e-80 | 265 |
Msa1360280 | MtrunA17_Chr4g0014791 | 31.944 | 576 | 342 | 14 | 4 | 566 | 10 | 548 | 4.03e-80 | 264 |
Msa1360280 | MtrunA17_Chr7g0261881 | 31.369 | 577 | 358 | 15 | 36 | 594 | 38 | 594 | 3.08e-79 | 262 |
Msa1360280 | MtrunA17_Chr5g0439381 | 30.442 | 565 | 359 | 11 | 29 | 584 | 32 | 571 | 3.12e-79 | 262 |
Msa1360280 | MtrunA17_Chr4g0056431 | 30.465 | 581 | 372 | 13 | 25 | 588 | 24 | 589 | 4.45e-79 | 262 |
Msa1360280 | MtrunA17_Chr7g0261771 | 30.612 | 588 | 377 | 13 | 26 | 598 | 31 | 602 | 9.81e-79 | 261 |
Msa1360280 | MtrunA17_Chr7g0261791 | 31.005 | 587 | 366 | 14 | 21 | 587 | 23 | 590 | 4.67e-78 | 259 |
Msa1360280 | MtrunA17_Chr3g0077151 | 31.047 | 554 | 339 | 10 | 25 | 570 | 28 | 546 | 5.40e-78 | 258 |
Msa1360280 | MtrunA17_Chr3g0112611 | 32.399 | 571 | 354 | 15 | 36 | 593 | 43 | 594 | 5.64e-78 | 259 |
Msa1360280 | MtrunA17_Chr4g0063591 | 29.661 | 590 | 397 | 10 | 1 | 586 | 1 | 576 | 1.09e-77 | 258 |
Msa1360280 | MtrunA17_Chr1g0166711 | 31.664 | 559 | 350 | 12 | 36 | 579 | 36 | 577 | 1.45e-77 | 258 |
Msa1360280 | MtrunA17_Chr3g0114501 | 31.193 | 545 | 342 | 15 | 36 | 566 | 33 | 558 | 3.68e-77 | 257 |
Msa1360280 | MtrunA17_Chr4g0014801 | 30.836 | 574 | 351 | 15 | 4 | 566 | 10 | 548 | 4.50e-77 | 256 |
Msa1360280 | MtrunA17_Chr4g0008651 | 30.168 | 537 | 354 | 12 | 36 | 566 | 45 | 566 | 4.97e-77 | 256 |
Msa1360280 | MtrunA17_Chr4g0014841 | 30.890 | 573 | 352 | 14 | 4 | 566 | 10 | 548 | 2.03e-76 | 254 |
Msa1360280 | MtrunA17_Chr7g0240381 | 29.091 | 605 | 379 | 17 | 2 | 589 | 9 | 580 | 7.22e-76 | 253 |
Msa1360280 | MtrunA17_Chr1g0166791 | 31.250 | 560 | 344 | 16 | 26 | 566 | 24 | 561 | 2.57e-75 | 252 |
Msa1360280 | MtrunA17_Chr8g0353031 | 31.478 | 575 | 347 | 10 | 28 | 587 | 21 | 563 | 7.70e-74 | 248 |
Msa1360280 | MtrunA17_Chr3g0133341 | 30.071 | 562 | 360 | 12 | 16 | 564 | 5 | 546 | 2.45e-72 | 243 |
Msa1360280 | MtrunA17_Chr2g0284701 | 28.405 | 602 | 403 | 14 | 1 | 584 | 11 | 602 | 6.09e-72 | 243 |
Msa1360280 | MtrunA17_Chr7g0214461 | 28.961 | 587 | 387 | 11 | 10 | 586 | 63 | 629 | 7.27e-72 | 244 |
Msa1360280 | MtrunA17_Chr5g0400371 | 29.061 | 554 | 380 | 8 | 37 | 582 | 124 | 672 | 3.33e-71 | 243 |
Msa1360280 | MtrunA17_Chr7g0240131 | 29.918 | 488 | 319 | 10 | 113 | 588 | 1 | 477 | 3.97e-71 | 238 |
Msa1360280 | MtrunA17_Chr7g0240181 | 30.652 | 460 | 297 | 9 | 113 | 560 | 1 | 450 | 4.20e-70 | 235 |
Msa1360280 | MtrunA17_Chr7g0240211 | 30.652 | 460 | 297 | 9 | 113 | 560 | 1 | 450 | 4.75e-70 | 235 |
Msa1360280 | MtrunA17_Chr2g0276751 | 28.399 | 581 | 379 | 14 | 11 | 578 | 18 | 574 | 1.36e-69 | 236 |
Msa1360280 | MtrunA17_Chr7g0235521 | 30.652 | 460 | 297 | 9 | 113 | 560 | 1 | 450 | 1.61e-69 | 233 |
Msa1360280 | MtrunA17_Chr1g0193391 | 27.332 | 611 | 405 | 15 | 11 | 611 | 3 | 584 | 1.40e-68 | 234 |
Msa1360280 | MtrunA17_Chr1g0166741 | 30.855 | 538 | 334 | 16 | 26 | 549 | 27 | 540 | 1.99e-68 | 233 |
Msa1360280 | MtrunA17_Chr4g0014861 | 31.973 | 441 | 276 | 9 | 134 | 566 | 3 | 427 | 2.91e-68 | 229 |
Msa1360280 | MtrunA17_Chr1g0213711 | 29.049 | 568 | 366 | 13 | 15 | 566 | 8 | 554 | 1.23e-66 | 229 |
Msa1360280 | MtrunA17_Chr7g0271221 | 29.078 | 564 | 365 | 14 | 11 | 565 | 3 | 540 | 1.76e-66 | 228 |
Msa1360280 | MtrunA17_Chr8g0379971 | 29.180 | 610 | 380 | 16 | 14 | 579 | 2 | 603 | 3.12e-66 | 228 |
Msa1360280 | MtrunA17_Chr7g0240151 | 30.435 | 460 | 280 | 11 | 113 | 560 | 1 | 432 | 1.71e-65 | 222 |
Msa1360280 | MtrunA17_Chr1g0147591 | 55.670 | 194 | 81 | 4 | 154 | 344 | 9 | 200 | 2.45e-65 | 213 |
Msa1360280 | MtrunA17_Chr1g0166771 | 29.310 | 522 | 330 | 16 | 45 | 552 | 11 | 507 | 5.42e-65 | 223 |
Msa1360280 | MtrunA17_Chr7g0218851 | 28.846 | 572 | 377 | 10 | 26 | 585 | 47 | 600 | 1.21e-64 | 224 |
Msa1360280 | MtrunA17_Chr4g0054891 | 28.358 | 536 | 363 | 8 | 37 | 563 | 122 | 645 | 2.60e-63 | 221 |
Msa1360280 | MtrunA17_Chr7g0261661 | 29.821 | 503 | 322 | 13 | 113 | 600 | 1 | 487 | 5.38e-63 | 216 |
Msa1360280 | MtrunA17_Chr4g0011471 | 29.151 | 542 | 361 | 11 | 36 | 566 | 27 | 556 | 3.33e-62 | 216 |
Msa1360280 | MtrunA17_Chr1g0166731 | 30.353 | 481 | 307 | 10 | 112 | 579 | 9 | 474 | 5.36e-62 | 213 |
Msa1360280 | MtrunA17_Chr8g0379991 | 30.465 | 581 | 352 | 17 | 46 | 579 | 1 | 576 | 1.60e-61 | 214 |
Msa1360280 | MtrunA17_Chr3g0082631 | 31.808 | 437 | 257 | 12 | 151 | 563 | 34 | 453 | 2.71e-61 | 211 |
Msa1360280 | MtrunA17_Chr7g0217461 | 29.004 | 562 | 364 | 15 | 1 | 544 | 2 | 546 | 8.77e-61 | 213 |
Msa1360280 | MtrunA17_Chr8g0362711 | 26.998 | 563 | 362 | 14 | 28 | 565 | 27 | 565 | 3.32e-58 | 205 |
Msa1360280 | MtrunA17_Chr5g0415961 | 24.694 | 571 | 382 | 12 | 21 | 565 | 18 | 566 | 1.32e-54 | 196 |
Msa1360280 | MtrunA17_Chr4g0011041 | 25.312 | 561 | 388 | 14 | 23 | 566 | 32 | 578 | 2.29e-51 | 187 |
Msa1360280 | MtrunA17_Chr4g0069581 | 29.259 | 499 | 314 | 16 | 86 | 571 | 47 | 519 | 7.56e-50 | 182 |
Msa1360280 | MtrunA17_Chr7g0261751 | 29.870 | 462 | 265 | 13 | 26 | 442 | 31 | 478 | 3.08e-48 | 177 |
Msa1360280 | MtrunA17_Chr6g0451841 | 25.650 | 577 | 358 | 15 | 18 | 566 | 1 | 534 | 1.07e-46 | 173 |
Msa1360280 | MtrunA17_Chr3g0112631 | 31.119 | 286 | 189 | 3 | 294 | 579 | 3 | 280 | 1.40e-44 | 160 |
Msa1360280 | MtrunA17_Chr7g0261731 | 33.538 | 325 | 192 | 9 | 26 | 339 | 31 | 342 | 2.25e-43 | 159 |
Msa1360280 | MtrunA17_Chr3g0142121 | 31.683 | 303 | 181 | 6 | 297 | 594 | 3 | 284 | 1.14e-42 | 155 |
Msa1360280 | MtrunA17_Chr4g0060071 | 29.391 | 279 | 176 | 7 | 290 | 565 | 32 | 292 | 6.19e-37 | 140 |
Msa1360280 | MtrunA17_Chr3g0142111 | 31.690 | 284 | 184 | 5 | 25 | 301 | 46 | 326 | 2.22e-34 | 134 |
Msa1360280 | MtrunA17_Chr7g0234381 | 26.840 | 462 | 285 | 13 | 112 | 566 | 3 | 418 | 5.05e-31 | 125 |
Msa1360280 | MtrunA17_Chr7g0261721 | 28.696 | 230 | 161 | 2 | 371 | 598 | 4 | 232 | 1.27e-29 | 117 |
Msa1360280 | MtrunA17_Chr7g0234181 | 26.797 | 459 | 283 | 13 | 115 | 566 | 1 | 413 | 1.77e-27 | 115 |
Msa1360280 | MtrunA17_Chr7g0234151 | 25.918 | 463 | 288 | 14 | 112 | 566 | 3 | 418 | 5.55e-26 | 110 |
Msa1360280 | MtrunA17_Chr2g0326221 | 30.672 | 238 | 131 | 6 | 331 | 566 | 15 | 220 | 7.89e-25 | 103 |
Msa1360280 | MtrunA17_Chr1g0177601 | 68.852 | 61 | 19 | 0 | 55 | 115 | 1 | 61 | 2.66e-20 | 85.1 |
Msa1360280 | MtrunA17_Chr1g0177621 | 68.852 | 61 | 19 | 0 | 55 | 115 | 1 | 61 | 2.66e-20 | 85.1 |
Msa1360280 | MtrunA17_Chr1g0147581 | 41.071 | 112 | 60 | 1 | 431 | 542 | 10 | 115 | 2.96e-19 | 84.0 |
Msa1360280 | MtrunA17_Chr8g0382591 | 39.695 | 131 | 71 | 5 | 294 | 420 | 3 | 129 | 2.46e-18 | 82.0 |
Msa1360280 | MtrunA17_Chr3g0112651 | 28.713 | 202 | 131 | 6 | 100 | 295 | 9 | 203 | 5.51e-17 | 80.1 |
Msa1360280 | MtrunA17_Chr7g0240221 | 32.432 | 111 | 65 | 1 | 11 | 111 | 3 | 113 | 4.01e-14 | 69.3 |
Msa1360280 | MtrunA17_Chr7g0240191 | 32.432 | 111 | 65 | 1 | 11 | 111 | 3 | 113 | 4.01e-14 | 69.3 |
Msa1360280 | MtrunA17_Chr7g0240161 | 32.432 | 111 | 65 | 1 | 11 | 111 | 3 | 113 | 4.01e-14 | 69.3 |
Msa1360280 | MtrunA17_Chr7g0240141 | 31.532 | 111 | 66 | 1 | 11 | 111 | 3 | 113 | 1.55e-13 | 67.8 |
Msa1360280 | MtrunA17_Chr8g0362791 | 38.372 | 86 | 53 | 0 | 30 | 115 | 41 | 126 | 1.92e-12 | 65.1 |
Msa1360280 | MtrunA17_Chr7g0235511 | 30.973 | 113 | 66 | 2 | 11 | 111 | 3 | 115 | 1.01e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1360280 | AT1G52190.1 | 54.766 | 577 | 254 | 6 | 15 | 585 | 9 | 584 | 0.0 | 655 |
Msa1360280 | AT3G16180.1 | 53.242 | 586 | 267 | 7 | 11 | 591 | 6 | 589 | 0.0 | 635 |
Msa1360280 | AT1G69870.1 | 34.835 | 577 | 359 | 9 | 18 | 585 | 42 | 610 | 9.69e-121 | 372 |
Msa1360280 | AT5G62680.1 | 37.007 | 608 | 353 | 13 | 9 | 602 | 25 | 616 | 1.50e-117 | 363 |
Msa1360280 | AT1G68570.1 | 35.605 | 587 | 363 | 8 | 9 | 586 | 5 | 585 | 4.04e-116 | 359 |
Msa1360280 | AT3G47960.1 | 36.572 | 566 | 340 | 10 | 10 | 566 | 50 | 605 | 1.28e-111 | 349 |
Msa1360280 | AT1G18880.1 | 34.549 | 576 | 355 | 10 | 30 | 594 | 22 | 586 | 1.58e-111 | 347 |
Msa1360280 | AT5G11570.1 | 38.971 | 544 | 248 | 11 | 28 | 567 | 14 | 477 | 1.94e-111 | 343 |
Msa1360280 | AT1G27080.1 | 34.206 | 573 | 346 | 13 | 24 | 587 | 11 | 561 | 7.26e-107 | 335 |
Msa1360280 | AT1G62200.1 | 35.079 | 573 | 345 | 10 | 1 | 562 | 25 | 581 | 5.65e-106 | 333 |
Msa1360280 | AT1G68570.2 | 34.829 | 557 | 348 | 8 | 39 | 586 | 5 | 555 | 2.52e-104 | 328 |
Msa1360280 | AT2G02040.1 | 33.857 | 573 | 356 | 11 | 5 | 566 | 18 | 578 | 1.72e-103 | 326 |
Msa1360280 | AT1G62200.2 | 33.721 | 602 | 343 | 11 | 1 | 562 | 25 | 610 | 6.26e-101 | 320 |
Msa1360280 | AT1G62200.3 | 33.721 | 602 | 343 | 11 | 1 | 562 | 39 | 624 | 7.37e-101 | 321 |
Msa1360280 | AT3G54140.1 | 35.185 | 540 | 329 | 11 | 36 | 566 | 33 | 560 | 8.62e-101 | 318 |
Msa1360280 | AT3G54140.2 | 35.185 | 540 | 329 | 11 | 36 | 566 | 33 | 560 | 8.62e-101 | 318 |
Msa1360280 | AT5G01180.2 | 35.135 | 555 | 328 | 13 | 21 | 560 | 17 | 554 | 1.47e-99 | 315 |
Msa1360280 | AT5G01180.3 | 35.135 | 555 | 328 | 13 | 21 | 560 | 17 | 554 | 1.47e-99 | 315 |
Msa1360280 | AT5G01180.1 | 35.135 | 555 | 328 | 13 | 21 | 560 | 17 | 554 | 1.47e-99 | 315 |
Msa1360280 | AT1G27080.2 | 34.196 | 541 | 325 | 13 | 56 | 587 | 1 | 519 | 3.20e-98 | 311 |
Msa1360280 | AT5G28470.2 | 33.517 | 543 | 342 | 10 | 25 | 559 | 15 | 546 | 4.65e-97 | 308 |
Msa1360280 | AT5G28470.1 | 33.333 | 543 | 341 | 11 | 25 | 559 | 15 | 544 | 3.10e-94 | 301 |
Msa1360280 | AT3G45650.1 | 32.566 | 565 | 346 | 11 | 9 | 566 | 4 | 540 | 3.48e-91 | 293 |
Msa1360280 | AT3G45660.1 | 31.834 | 578 | 358 | 13 | 14 | 587 | 8 | 553 | 7.60e-89 | 287 |
Msa1360280 | AT3G45660.3 | 31.834 | 578 | 358 | 13 | 14 | 587 | 8 | 553 | 7.60e-89 | 287 |
Msa1360280 | AT3G45660.2 | 31.834 | 578 | 358 | 13 | 14 | 587 | 29 | 574 | 1.09e-88 | 287 |
Msa1360280 | AT3G54450.1 | 31.763 | 573 | 347 | 11 | 25 | 580 | 10 | 555 | 2.93e-87 | 283 |
Msa1360280 | AT3G45710.1 | 31.794 | 563 | 349 | 10 | 12 | 566 | 6 | 541 | 9.62e-86 | 279 |
Msa1360280 | AT3G45650.2 | 31.134 | 591 | 346 | 12 | 9 | 566 | 4 | 566 | 1.21e-85 | 280 |
Msa1360280 | AT2G02020.1 | 31.685 | 546 | 324 | 10 | 25 | 566 | 40 | 540 | 3.92e-85 | 277 |
Msa1360280 | AT1G69860.1 | 32.369 | 553 | 341 | 11 | 25 | 566 | 16 | 546 | 7.65e-85 | 276 |
Msa1360280 | AT2G26690.1 | 30.192 | 573 | 383 | 10 | 13 | 581 | 10 | 569 | 1.22e-82 | 271 |
Msa1360280 | AT3G45720.1 | 31.107 | 569 | 350 | 14 | 28 | 588 | 20 | 554 | 1.80e-80 | 265 |
Msa1360280 | AT5G46050.1 | 30.443 | 542 | 348 | 11 | 21 | 549 | 19 | 544 | 6.58e-80 | 264 |
Msa1360280 | AT2G26690.2 | 30.642 | 545 | 361 | 10 | 41 | 581 | 5 | 536 | 1.03e-79 | 263 |
Msa1360280 | AT3G21670.1 | 29.431 | 598 | 392 | 12 | 11 | 599 | 12 | 588 | 1.41e-78 | 261 |
Msa1360280 | AT2G26690.3 | 30.784 | 536 | 354 | 10 | 50 | 581 | 2 | 524 | 1.04e-77 | 257 |
Msa1360280 | AT2G37900.1 | 29.455 | 550 | 355 | 12 | 24 | 563 | 34 | 560 | 4.33e-77 | 256 |
Msa1360280 | AT1G12110.1 | 31.771 | 576 | 361 | 15 | 21 | 579 | 19 | 579 | 9.61e-77 | 256 |
Msa1360280 | AT3G45680.1 | 30.810 | 568 | 356 | 12 | 7 | 566 | 1 | 539 | 1.04e-76 | 255 |
Msa1360280 | AT1G22540.1 | 31.826 | 553 | 345 | 10 | 21 | 566 | 22 | 549 | 1.87e-76 | 254 |
Msa1360280 | AT3G45700.1 | 29.611 | 591 | 359 | 13 | 11 | 593 | 5 | 546 | 5.27e-76 | 253 |
Msa1360280 | AT5G46040.1 | 30.857 | 525 | 336 | 11 | 36 | 549 | 36 | 544 | 1.17e-74 | 250 |
Msa1360280 | AT5G13400.1 | 31.349 | 571 | 361 | 11 | 29 | 583 | 66 | 621 | 1.65e-74 | 251 |
Msa1360280 | AT1G33440.1 | 28.983 | 590 | 372 | 15 | 23 | 589 | 32 | 597 | 3.18e-74 | 249 |
Msa1360280 | AT2G40460.1 | 30.127 | 551 | 352 | 12 | 36 | 575 | 33 | 561 | 5.30e-74 | 248 |
Msa1360280 | AT1G72125.1 | 30.203 | 543 | 340 | 10 | 36 | 566 | 38 | 553 | 8.24e-74 | 248 |
Msa1360280 | AT3G53960.1 | 27.915 | 609 | 400 | 14 | 10 | 594 | 6 | 599 | 2.59e-73 | 247 |
Msa1360280 | AT2G37900.2 | 29.495 | 495 | 317 | 12 | 78 | 563 | 10 | 481 | 4.45e-71 | 238 |
Msa1360280 | AT1G59740.1 | 28.998 | 569 | 368 | 14 | 11 | 563 | 23 | 571 | 5.05e-70 | 238 |
Msa1360280 | AT1G72140.1 | 28.929 | 560 | 340 | 12 | 25 | 566 | 32 | 551 | 5.49e-70 | 237 |
Msa1360280 | AT2G02020.2 | 29.044 | 544 | 320 | 9 | 25 | 566 | 40 | 519 | 1.32e-69 | 235 |
Msa1360280 | AT1G32450.1 | 28.147 | 572 | 388 | 9 | 37 | 592 | 47 | 611 | 3.26e-69 | 236 |
Msa1360280 | AT1G22550.1 | 29.758 | 578 | 367 | 12 | 2 | 566 | 5 | 556 | 6.97e-69 | 234 |
Msa1360280 | AT5G46050.2 | 31.166 | 446 | 284 | 8 | 113 | 549 | 1 | 432 | 2.07e-67 | 228 |
Msa1360280 | AT1G72120.1 | 29.545 | 572 | 349 | 12 | 11 | 566 | 16 | 549 | 2.20e-67 | 230 |
Msa1360280 | AT1G22570.1 | 29.084 | 557 | 361 | 9 | 2 | 547 | 5 | 538 | 3.95e-67 | 229 |
Msa1360280 | AT1G27040.1 | 29.061 | 554 | 349 | 11 | 29 | 565 | 29 | 555 | 5.71e-66 | 226 |
Msa1360280 | AT1G27040.2 | 29.061 | 554 | 349 | 11 | 29 | 565 | 25 | 551 | 1.07e-65 | 226 |
Msa1360280 | AT1G22570.2 | 29.537 | 518 | 331 | 9 | 41 | 547 | 7 | 501 | 1.72e-64 | 222 |
Msa1360280 | AT1G72130.1 | 28.261 | 552 | 342 | 10 | 25 | 566 | 23 | 530 | 1.99e-64 | 222 |
Msa1360280 | AT4G21680.1 | 27.133 | 586 | 384 | 14 | 3 | 566 | 6 | 570 | 2.46e-63 | 220 |
Msa1360280 | AT1G27040.3 | 29.044 | 544 | 342 | 11 | 39 | 565 | 7 | 523 | 6.22e-63 | 218 |
Msa1360280 | AT3G45690.1 | 28.980 | 559 | 322 | 15 | 15 | 566 | 6 | 496 | 1.22e-62 | 216 |
Msa1360280 | AT5G19640.1 | 27.444 | 583 | 373 | 16 | 28 | 593 | 60 | 609 | 1.37e-58 | 207 |
Msa1360280 | AT5G14940.1 | 26.399 | 572 | 365 | 12 | 25 | 572 | 5 | 544 | 2.03e-52 | 189 |
Msa1360280 | AT1G69850.1 | 26.362 | 569 | 365 | 15 | 29 | 565 | 27 | 573 | 7.19e-52 | 188 |
Msa1360280 | AT1G72130.2 | 28.406 | 433 | 266 | 9 | 144 | 566 | 14 | 412 | 1.88e-50 | 181 |
Msa1360280 | AT1G72130.3 | 28.406 | 433 | 266 | 9 | 144 | 566 | 14 | 412 | 1.88e-50 | 181 |
Msa1360280 | AT3G01350.1 | 25.868 | 576 | 373 | 16 | 25 | 572 | 5 | 554 | 6.73e-49 | 180 |
Msa1360280 | AT5G62730.1 | 24.955 | 557 | 381 | 11 | 28 | 572 | 57 | 588 | 6.62e-47 | 175 |
Msa1360280 | AT5G62730.2 | 24.954 | 549 | 375 | 11 | 36 | 572 | 6 | 529 | 1.40e-45 | 170 |
Msa1360280 | AT3G25260.1 | 26.128 | 532 | 332 | 15 | 41 | 565 | 35 | 512 | 1.35e-44 | 167 |
Msa1360280 | AT3G25280.1 | 25.385 | 520 | 335 | 14 | 52 | 565 | 46 | 518 | 6.51e-37 | 145 |
Msa1360280 | AT2G38100.2 | 24.081 | 544 | 353 | 13 | 55 | 586 | 2 | 497 | 4.26e-29 | 122 |
Msa1360280 | AT2G38100.1 | 24.081 | 544 | 353 | 13 | 55 | 586 | 18 | 513 | 1.26e-28 | 120 |
Msa1360280 | AT2G38100.3 | 24.081 | 544 | 353 | 13 | 55 | 586 | 24 | 519 | 1.50e-28 | 120 |
Find 144 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGTAATAAAACTCATTT+TGG | 0.123205 | tig0016995:+56978 | None:intergenic |
TTCCAAAGCTCTAGTGTTAT+TGG | 0.141390 | tig0016995:+58006 | None:intergenic |
GTCATTTCGACAAATATTTA+TGG | 0.147038 | tig0016995:-56802 | Msa1360280:CDS |
GATCATCTTGGTTGGAAAAT+TGG | 0.157074 | tig0016995:-57908 | Msa1360280:CDS |
ACTCGTGTAGGCCGACTATT+AGG | 0.200019 | tig0016995:-56124 | Msa1360280:three_prime_UTR |
AAATAAAGCTTGTGTTATTA+AGG | 0.217505 | tig0016995:-57530 | Msa1360280:CDS |
TTATCTTTGTAATACTTATA+TGG | 0.221781 | tig0016995:-57270 | Msa1360280:CDS |
GCTGAGGCATTCAATGTTAT+TGG | 0.226194 | tig0016995:-57001 | Msa1360280:CDS |
CAATGGAATAACTTTAATAA+TGG | 0.287573 | tig0016995:+57423 | None:intergenic |
GCTTGCACCTTCACTTTGTT+TGG | 0.290635 | tig0016995:-57032 | Msa1360280:CDS |
TTTATTGCAGATTCTTATAT+TGG | 0.292916 | tig0016995:-59138 | Msa1360280:CDS |
CTTGGTTGGAAAATTGGTTT+TGG | 0.297432 | tig0016995:-57902 | Msa1360280:CDS |
TTCAAGATTAGTGAAGAAAA+TGG | 0.297883 | tig0016995:-56545 | Msa1360280:CDS |
CAAGTAGGAGGCTGCGTCGC+TGG | 0.300060 | tig0016995:+58175 | None:intergenic |
ATTTCATGTTCTTTAGCATT+TGG | 0.304538 | tig0016995:-58058 | Msa1360280:CDS |
TTAGTATGCAGTTGGGCTTA+TGG | 0.310648 | tig0016995:-56740 | Msa1360280:CDS |
AAGGAGAAAGAGAGCAATTC+AGG | 0.311738 | tig0016995:-57104 | Msa1360280:CDS |
GCTGTCATAGCAGCTCTATT+TGG | 0.312595 | tig0016995:-57947 | Msa1360280:CDS |
GATAAGATACCAATGATAAA+AGG | 0.324542 | tig0016995:+59405 | None:intergenic |
TGAAATGATATGTCTGTCTA+AGG | 0.326067 | tig0016995:+57336 | None:intergenic |
GTTATTCCATTGTGGTCAAC+AGG | 0.337103 | tig0016995:-57412 | Msa1360280:CDS |
AGGTTCTATTATCAGTTTCC+TGG | 0.349967 | tig0016995:-59094 | Msa1360280:intron |
GCGTTAATTCTGATAGGAAT+TGG | 0.359891 | tig0016995:-58091 | Msa1360280:CDS |
TTTGCTGATATACAGCCTTC+AGG | 0.359961 | tig0016995:+58142 | None:intergenic |
GAAACACTAGACATAGTCTT+TGG | 0.360014 | tig0016995:+56950 | None:intergenic |
ATTAACATCGGAGGCTCGTT+TGG | 0.361174 | tig0016995:-57376 | Msa1360280:CDS |
CAACATGATATTGTATTTGA+TGG | 0.361317 | tig0016995:-59247 | Msa1360280:CDS |
GCACCTTCACTTTGTTTGGC+TGG | 0.361719 | tig0016995:-57028 | Msa1360280:CDS |
CCTCTTATCTTTGATGCTAA+AGG | 0.364995 | tig0016995:+57220 | None:intergenic |
TTCCAATAACACTAGAGCTT+TGG | 0.365192 | tig0016995:-58008 | Msa1360280:CDS |
TCATTTCGACAAATATTTAT+GGG | 0.366923 | tig0016995:-56801 | Msa1360280:CDS |
AAAAGAAGACACCAAGTTTC+CGG | 0.373199 | tig0016995:+56898 | None:intergenic |
AGTGTTTCTTCAGCACTCTC+TGG | 0.375458 | tig0016995:-56935 | Msa1360280:CDS |
CTAACCTTGTCATCAATTTG+TGG | 0.379224 | tig0016995:+56635 | None:intergenic |
GACATGTGGTTCCCACGATT+TGG | 0.391714 | tig0016995:+56382 | None:intergenic |
AGACCACCCTTGCTTCTTTG+TGG | 0.395960 | tig0016995:+59438 | None:intergenic |
TCCAAAGTGAGTGAAGAAAA+TGG | 0.396852 | tig0016995:-56698 | Msa1360280:CDS |
CGATTCCTAGGTGTTGGAAT+AGG | 0.398985 | tig0016995:-59114 | Msa1360280:CDS |
CAAAAGATAGATATATATAT+AGG | 0.402040 | tig0016995:+59564 | None:intergenic |
TCTTATATTGGTCGATTCCT+AGG | 0.404111 | tig0016995:-59126 | Msa1360280:CDS |
TTCTTCAGCACTCTCTGGAT+TGG | 0.405295 | tig0016995:-56930 | Msa1360280:CDS |
CCTTTAGCATCAAAGATAAG+AGG | 0.419532 | tig0016995:-57220 | Msa1360280:CDS |
ATCCATGTGTCATAATCTTA+AGG | 0.421809 | tig0016995:+56184 | None:intergenic |
ATCAAATACAATATCATGTT+GGG | 0.422265 | tig0016995:+59249 | None:intergenic |
AGGCTGCGTCGCTGGGATCA+TGG | 0.429972 | tig0016995:+58183 | None:intergenic |
CTTTGGAAATATTCTTCACT+TGG | 0.431586 | tig0016995:-57991 | Msa1360280:CDS |
ATCAGCAAAACCAGGTCAAA+TGG | 0.449605 | tig0016995:-58128 | Msa1360280:CDS |
CCAAGTCCCATTCTTATCTT+CGG | 0.449902 | tig0016995:+57178 | None:intergenic |
TGTATTATTTAGTATGCAGT+TGG | 0.452225 | tig0016995:-56748 | Msa1360280:CDS |
CTCTCTGCGTTAATTCTGAT+AGG | 0.460782 | tig0016995:-58097 | Msa1360280:CDS |
GGCAATGGCTGCCGGAAACT+TGG | 0.462855 | tig0016995:-56909 | Msa1360280:CDS |
TGCTGCTGATGAAGAAGAAA+TGG | 0.464327 | tig0016995:-59475 | Msa1360280:CDS |
CCGAAGATAAGAATGGGACT+TGG | 0.464562 | tig0016995:-57178 | Msa1360280:CDS |
AAGTAGGAGGCTGCGTCGCT+GGG | 0.464764 | tig0016995:+58176 | None:intergenic |
AAATATTTATGGGTTATAGC+TGG | 0.467548 | tig0016995:-56791 | Msa1360280:CDS |
ACTTCAAGTGGAGGAAAAGA+TGG | 0.470588 | tig0016995:-56851 | Msa1360280:CDS |
TAGTGAAGAAAATGGCTTGA+AGG | 0.470983 | tig0016995:-56537 | Msa1360280:CDS |
GCAATAAAAGCAGCAACAAC+AGG | 0.471001 | tig0016995:+59153 | None:intergenic |
AGGAGGAATAGTACGATAGA+AGG | 0.477176 | tig0016995:-56517 | Msa1360280:exon |
ATTCTGATAGGAATTGGAAA+TGG | 0.478772 | tig0016995:-58085 | Msa1360280:CDS |
CTTGCTAGGATGGCAAGTAC+TGG | 0.481516 | tig0016995:-59279 | Msa1360280:CDS |
TCTGGATTGGCAATGGCTGC+CGG | 0.481828 | tig0016995:-56917 | Msa1360280:CDS |
TTGTTCCAACTGATAGACTA+AGG | 0.483967 | tig0016995:-57682 | Msa1360280:intron |
TGAATTCAAGAATGGTGGTC+AGG | 0.484071 | tig0016995:-56579 | Msa1360280:CDS |
ATTGGTCGATTCCTAGGTGT+TGG | 0.484458 | tig0016995:-59120 | Msa1360280:CDS |
CACATGTCACATGTGTTTCA+CGG | 0.485689 | tig0016995:-56367 | Msa1360280:three_prime_UTR |
TGAGATTAATTTCCAAATCG+TGG | 0.488271 | tig0016995:-56394 | Msa1360280:three_prime_UTR |
ACTGCTAGAAAGAATGTCAT+TGG | 0.496868 | tig0016995:+56462 | None:intergenic |
TAATGAGGCACTTGCTAGGA+TGG | 0.505197 | tig0016995:-59289 | Msa1360280:CDS |
GTATTATTTAGTATGCAGTT+GGG | 0.508088 | tig0016995:-56747 | Msa1360280:CDS |
ATCAGTCCGAAGATAAGAAT+GGG | 0.508597 | tig0016995:-57184 | Msa1360280:CDS |
CTTCTCATATCCTCTGCAGC+TGG | 0.510191 | tig0016995:-59186 | Msa1360280:CDS |
AAGTTCAAACTTTGAAGTAC+CGG | 0.513148 | tig0016995:-57314 | Msa1360280:CDS |
CATCAAATACAATATCATGT+TGG | 0.518744 | tig0016995:+59248 | None:intergenic |
TATCAGTCCGAAGATAAGAA+TGG | 0.521040 | tig0016995:-57185 | Msa1360280:CDS |
ATCTTCGGACTGATACTCAC+TGG | 0.523009 | tig0016995:+57193 | None:intergenic |
TGGTATGTCTCTGAATGTAT+TGG | 0.523497 | tig0016995:+56482 | None:intergenic |
CTCGTGTAGGCCGACTATTA+GGG | 0.524698 | tig0016995:-56123 | Msa1360280:three_prime_UTR |
GAGATTAATTTCCAAATCGT+GGG | 0.530007 | tig0016995:-56393 | Msa1360280:three_prime_UTR |
AGCACTCTCTGGATTGGCAA+TGG | 0.530645 | tig0016995:-56924 | Msa1360280:CDS |
AACATGATATTGTATTTGAT+GGG | 0.530924 | tig0016995:-59246 | Msa1360280:CDS |
CAAAGAACCAGCTTGCTCAC+TGG | 0.541714 | tig0016995:-57806 | Msa1360280:CDS |
CTTTAGCATCAAAGATAAGA+GGG | 0.548696 | tig0016995:-57219 | Msa1360280:CDS |
CTGATAGGAATTGGAAATGG+TGG | 0.549275 | tig0016995:-58082 | Msa1360280:CDS |
ATTGAAAACACTACTTCAAG+TGG | 0.549303 | tig0016995:-56863 | Msa1360280:CDS |
TTGTTTGGCTGGTATAGCTG+AGG | 0.550780 | tig0016995:-57017 | Msa1360280:CDS |
TACGATAGAAGGCTTATAGT+TGG | 0.551668 | tig0016995:-56506 | Msa1360280:three_prime_UTR |
AAACTAATAATTTATGAAGG+AGG | 0.553015 | tig0016995:+56300 | None:intergenic |
ATTTATTGTTGAACCATCTG+AGG | 0.553024 | tig0016995:+57489 | None:intergenic |
CAATCCACAAATTGATGACA+AGG | 0.554131 | tig0016995:-56639 | Msa1360280:CDS |
AGTAACATTGCCATTTGACC+TGG | 0.557875 | tig0016995:+58118 | None:intergenic |
ATATAAGTATTACAAAGATA+AGG | 0.558130 | tig0016995:+57272 | None:intergenic |
ATGGTTCAACAATAAATCGT+TGG | 0.560017 | tig0016995:-57483 | Msa1360280:CDS |
CAGCTAATGAGGCACTTGCT+AGG | 0.560867 | tig0016995:-59293 | Msa1360280:CDS |
GAGTAGCTGTAGCAAGATGA+AGG | 0.565218 | tig0016995:+59214 | None:intergenic |
ATATCCAAGATCATCTTGGT+TGG | 0.566372 | tig0016995:-57916 | Msa1360280:CDS |
ACATGTCACATGTGTTTCAC+GGG | 0.566506 | tig0016995:-56366 | Msa1360280:three_prime_UTR |
CACCTTAAGATTATGACACA+TGG | 0.569230 | tig0016995:-56186 | Msa1360280:three_prime_UTR |
GGTGGATTGCTGCAAGTAGG+AGG | 0.569731 | tig0016995:+58163 | None:intergenic |
GAGTTAACTGAATTCAAGAA+TGG | 0.573785 | tig0016995:-56587 | Msa1360280:CDS |
TCAAACTTTGAAGTACCGGC+AGG | 0.576815 | tig0016995:-57310 | Msa1360280:CDS |
TTGGATACTTGATCAGCTGT+AGG | 0.577217 | tig0016995:+56716 | None:intergenic |
TGCAAAACCAGTGAGCAAGC+TGG | 0.577546 | tig0016995:+57799 | None:intergenic |
GTATATATCCAAGATCATCT+TGG | 0.577864 | tig0016995:-57920 | Msa1360280:CDS |
TGAAGAAAATGGCTTGAAGG+AGG | 0.581996 | tig0016995:-56534 | Msa1360280:CDS |
CGAAGATAAGAATGGGACTT+GGG | 0.582353 | tig0016995:-57177 | Msa1360280:CDS |
GATTTCTGATAATATTAACA+AGG | 0.582713 | tig0016995:-56825 | Msa1360280:CDS |
GATATAAGCATGAGTGCTGC+TGG | 0.582922 | tig0016995:+57875 | None:intergenic |
AGGATGGCAAGTACTGGACT+TGG | 0.587802 | tig0016995:-59273 | Msa1360280:CDS |
TAGTGATGAAACTAGTTCAA+AGG | 0.587940 | tig0016995:-56615 | Msa1360280:CDS |
TGTGAAATTTCCAGCTGCAG+AGG | 0.589353 | tig0016995:+59176 | None:intergenic |
AGAAAGAGAGCAATTCAGGC+AGG | 0.594021 | tig0016995:-57100 | Msa1360280:CDS |
TTATTAAAGTTATTCCATTG+TGG | 0.594692 | tig0016995:-57420 | Msa1360280:CDS |
CTTCAAGTGGAGGAAAAGAT+GGG | 0.602416 | tig0016995:-56850 | Msa1360280:CDS |
GATACCAATGATAAAAGGCA+TGG | 0.603181 | tig0016995:+59410 | None:intergenic |
GTATACCTTAGTCTATCAGT+TGG | 0.607004 | tig0016995:+57677 | None:intergenic |
GGCTGTATATCAGCAAAACC+AGG | 0.607418 | tig0016995:-58136 | Msa1360280:CDS |
TGCTATGACAGCTATAGTTG+TGG | 0.614444 | tig0016995:+57958 | None:intergenic |
TTTATGAAGGAGGAGTGCTA+TGG | 0.614803 | tig0016995:+56310 | None:intergenic |
AATTAGTATGATACTCGTGT+AGG | 0.618189 | tig0016995:-56136 | Msa1360280:three_prime_UTR |
GAACAAGATATAGCCTCAGA+TGG | 0.621248 | tig0016995:-57502 | Msa1360280:CDS |
GCTGATATACAGCCTTCAGG+TGG | 0.623699 | tig0016995:+58145 | None:intergenic |
TTAACTGAATTCAAGAATGG+TGG | 0.626429 | tig0016995:-56584 | Msa1360280:CDS |
AGCAAGAAAGAATAAGACAG+TGG | 0.634801 | tig0016995:+57853 | None:intergenic |
ATTATAGTAAAAGATCCTGC+CGG | 0.635315 | tig0016995:+57295 | None:intergenic |
GAAAACACTACTTCAAGTGG+AGG | 0.636406 | tig0016995:-56860 | Msa1360280:CDS |
TTATTCCATTGTGGTCAACA+GGG | 0.637429 | tig0016995:-57411 | Msa1360280:CDS |
TGTCATGACACCCTAATAGT+CGG | 0.637642 | tig0016995:+56113 | None:intergenic |
ACTTGCAGCAATCCACCTGA+AGG | 0.637785 | tig0016995:-58157 | Msa1360280:CDS |
ATGATGGTAAAATTCAGGTG+AGG | 0.641850 | tig0016995:+57724 | None:intergenic |
GCGATCCCTGTTGACCACAA+TGG | 0.645059 | tig0016995:+57406 | None:intergenic |
ATCGCAATGTCTATTAACAT+CGG | 0.651661 | tig0016995:-57388 | Msa1360280:CDS |
ATTTCTGATAATATTAACAA+GGG | 0.652732 | tig0016995:-56824 | Msa1360280:CDS |
TCAGGTGGATTGCTGCAAGT+AGG | 0.653513 | tig0016995:+58160 | None:intergenic |
ATACCAGCCAAACAAAGTGA+AGG | 0.655978 | tig0016995:+57025 | None:intergenic |
TGAAGAAAATGGTTCCAATG+AGG | 0.659753 | tig0016995:-56687 | Msa1360280:CDS |
ACTATTAGGGTGTCATGACA+CGG | 0.659868 | tig0016995:-56110 | None:intergenic |
AAACCACAAAGAAGCAAGGG+TGG | 0.667497 | tig0016995:-59441 | Msa1360280:CDS |
GCAATGTCTATTAACATCGG+AGG | 0.673604 | tig0016995:-57385 | Msa1360280:CDS |
CAAGTGGAGGAAAAGATGGG+TGG | 0.675884 | tig0016995:-56847 | Msa1360280:CDS |
TATAGGGAATGTCAATGCTG+TGG | 0.699156 | tig0016995:-58213 | Msa1360280:intron |
TAGAACCTATTCCAACACCT+AGG | 0.705760 | tig0016995:+59109 | None:intergenic |
CGTGAAACACATGTGACATG+TGG | 0.714313 | tig0016995:+56368 | None:intergenic |
TGTTGAAAATGTCTGCAATG+TGG | 0.749104 | tig0016995:-57054 | Msa1360280:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATATTTTATTTATTATTT+TGG | - | tig0016995:59436-59455 | Msa1360280:CDS | 0.0% |
!! | TTCTTTCAAAAAAAAAAAAA+AGG | + | tig0016995:56931-56950 | None:intergenic | 10.0% |
!! | TGATTAATTAAAGATATATT+AGG | - | tig0016995:57019-57038 | Msa1360280:CDS | 10.0% |
!!! | AATTAATATTCTGAAATTAT+TGG | - | tig0016995:57400-57419 | Msa1360280:CDS | 10.0% |
!! | AAAAAACTAATAATTTATGA+AGG | + | tig0016995:59399-59418 | None:intergenic | 10.0% |
!! | CAAAAGATAGATATATATAT+AGG | + | tig0016995:56132-56151 | None:intergenic | 15.0% |
!! | TAGATACCAATAAAAAAAAA+TGG | - | tig0016995:56167-56186 | Msa1360280:three_prime_UTR | 15.0% |
!! | AATGAATATATAATATTACC+AGG | + | tig0016995:56620-56639 | None:intergenic | 15.0% |
!! | ATATTATTAAGTCCAATTAT+GGG | - | tig0016995:56702-56721 | Msa1360280:CDS | 15.0% |
!! | TATGAAAAAGAATCATATAA+AGG | - | tig0016995:57344-57363 | Msa1360280:CDS | 15.0% |
!!! | AATTTTCTTTTCTTTTAACT+TGG | + | tig0016995:57667-57686 | None:intergenic | 15.0% |
!! | ATATAAGTATTACAAAGATA+AGG | + | tig0016995:58424-58443 | None:intergenic | 15.0% |
!! | TTATCTTTGTAATACTTATA+TGG | - | tig0016995:58423-58442 | Msa1360280:intron | 15.0% |
!! | ATTTCTGATAATATTAACAA+GGG | - | tig0016995:58869-58888 | Msa1360280:intron | 15.0% |
!!! | AGTTGTTATTTTAAATTCTT+AGG | - | tig0016995:59465-59484 | Msa1360280:CDS | 15.0% |
!!! | CCTTATCCATTTTTTTTTAT+TGG | + | tig0016995:56176-56195 | None:intergenic | 20.0% |
!! | CCAATAAAAAAAAATGGATA+AGG | - | tig0016995:56173-56192 | Msa1360280:three_prime_UTR | 20.0% |
!!! | CTTTATTTTTACTTTGAATG+AGG | - | tig0016995:56337-56356 | Msa1360280:three_prime_UTR | 20.0% |
!! | ATCAAATACAATATCATGTT+GGG | + | tig0016995:56447-56466 | None:intergenic | 20.0% |
!! | AACATGATATTGTATTTGAT+GGG | - | tig0016995:56447-56466 | Msa1360280:three_prime_UTR | 20.0% |
!! | TTTATTGCAGATTCTTATAT+TGG | - | tig0016995:56555-56574 | Msa1360280:CDS | 20.0% |
!!! | AAAAGATAAGAAAAGTATCA+TGG | + | tig0016995:56669-56688 | None:intergenic | 20.0% |
!! | CATATTATTAAGTCCAATTA+TGG | - | tig0016995:56701-56720 | Msa1360280:CDS | 20.0% |
!! | CTCGAATATTTAATTGATAT+AGG | + | tig0016995:57234-57253 | None:intergenic | 20.0% |
!!! | TAATTTTAAAAAGGAATCTG+AGG | + | tig0016995:57299-57318 | None:intergenic | 20.0% |
!! | ATTGGTATAATGAAAAAAGT+TGG | - | tig0016995:57418-57437 | Msa1360280:CDS | 20.0% |
!! | AAACAAACAAACAAAAAAGA+AGG | + | tig0016995:57451-57470 | None:intergenic | 20.0% |
!!! | TTTGTTTGTTTGTTGTTATA+GGG | - | tig0016995:57464-57483 | Msa1360280:CDS | 20.0% |
!!! | TGAAAGTTTTCTGTTTTTAT+AGG | + | tig0016995:57936-57955 | None:intergenic | 20.0% |
!!! | TTTTTATGATGGTAAAATTC+AGG | + | tig0016995:57977-57996 | None:intergenic | 20.0% |
!!! | TGTTATTTGAACAAAAATTC+AGG | - | tig0016995:58087-58106 | Msa1360280:CDS | 20.0% |
!! | TGAAATCAAACGTTTAATAT+GGG | + | tig0016995:58130-58149 | None:intergenic | 20.0% |
!! | ATGAAATCAAACGTTTAATA+TGG | + | tig0016995:58131-58150 | None:intergenic | 20.0% |
!!! | AAATAAAGCTTGTGTTATTA+AGG | - | tig0016995:58163-58182 | Msa1360280:CDS | 20.0% |
!! | CAATGGAATAACTTTAATAA+TGG | + | tig0016995:58273-58292 | None:intergenic | 20.0% |
!! | TTATTAAAGTTATTCCATTG+TGG | - | tig0016995:58273-58292 | Msa1360280:intron | 20.0% |
!!! | GTTTTTTAATTTTCTTCACT+TGG | - | tig0016995:58541-58560 | Msa1360280:intron | 20.0% |
!!! | CTTTGTAATAAAACTCATTT+TGG | + | tig0016995:58718-58737 | None:intergenic | 20.0% |
!! | GATTTCTGATAATATTAACA+AGG | - | tig0016995:58868-58887 | Msa1360280:intron | 20.0% |
!! | TCATTTCGACAAATATTTAT+GGG | - | tig0016995:58892-58911 | Msa1360280:intron | 20.0% |
!! | AAACTAATAATTTATGAAGG+AGG | + | tig0016995:59396-59415 | None:intergenic | 20.0% |
! | GATAAGATACCAATGATAAA+AGG | + | tig0016995:56291-56310 | None:intergenic | 25.0% |
! | CATCAAATACAATATCATGT+TGG | + | tig0016995:56448-56467 | None:intergenic | 25.0% |
! | CAACATGATATTGTATTTGA+TGG | - | tig0016995:56446-56465 | Msa1360280:three_prime_UTR | 25.0% |
! | GTATCATGGAATGAATAAAA+AGG | + | tig0016995:56655-56674 | None:intergenic | 25.0% |
! | ATACAATTTACTCCCATAAT+TGG | + | tig0016995:56717-56736 | None:intergenic | 25.0% |
! | TCAAAATGTGACAATTCAAA+AGG | + | tig0016995:56796-56815 | None:intergenic | 25.0% |
! | TGCAAAAGTGACAATTATAA+AGG | - | tig0016995:56835-56854 | Msa1360280:CDS | 25.0% |
!!! | GTTTGTTTGTTTGTTGTTAT+AGG | - | tig0016995:57463-57482 | Msa1360280:CDS | 25.0% |
! | ATTTCATGTTCTTTAGCATT+TGG | - | tig0016995:57635-57654 | Msa1360280:intron | 25.0% |
!! | TGTGTAATTTTCACATAAAG+AGG | + | tig0016995:57869-57888 | None:intergenic | 25.0% |
! | ATATGCAAAAGCTATAAAGA+TGG | + | tig0016995:58041-58060 | None:intergenic | 25.0% |
!!! | AAACGTTTGATTTCATTTTC+AGG | - | tig0016995:58135-58154 | Msa1360280:CDS | 25.0% |
!! | GGATTTTTGAATAATACTCA+TGG | - | tig0016995:58614-58633 | Msa1360280:intron | 25.0% |
! | GTCATTTCGACAAATATTTA+TGG | - | tig0016995:58891-58910 | Msa1360280:intron | 25.0% |
!! | AAATATTTATGGGTTATAGC+TGG | - | tig0016995:58902-58921 | Msa1360280:intron | 25.0% |
! | TGTATTATTTAGTATGCAGT+TGG | - | tig0016995:58945-58964 | Msa1360280:intron | 25.0% |
! | GTATTATTTAGTATGCAGTT+GGG | - | tig0016995:58946-58965 | Msa1360280:intron | 25.0% |
! | TTCAAGATTAGTGAAGAAAA+TGG | - | tig0016995:59148-59167 | Msa1360280:CDS | 25.0% |
TGACAATTATAAAGGAACAG+AGG | - | tig0016995:56843-56862 | Msa1360280:CDS | 30.0% | |
GACAATTATAAAGGAACAGA+GGG | - | tig0016995:56844-56863 | Msa1360280:CDS | 30.0% | |
TAATCATACTTCAATGCAGA+AGG | - | tig0016995:56876-56895 | Msa1360280:CDS | 30.0% | |
! | AGAAGCATATATGTATAACC+TGG | - | tig0016995:56947-56966 | Msa1360280:CDS | 30.0% |
AATCAATATGTTGTAGATCC+AGG | + | tig0016995:56968-56987 | None:intergenic | 30.0% | |
GAACACTTGAATTGAATCTA+TGG | - | tig0016995:57041-57060 | Msa1360280:CDS | 30.0% | |
! | ATCTGAAACATAAAGAGAGA+CGG | - | tig0016995:57086-57105 | Msa1360280:CDS | 30.0% |
AGAAAGAATCACAAATCAAG+GGG | + | tig0016995:57130-57149 | None:intergenic | 30.0% | |
GAGAAAGAATCACAAATCAA+GGG | + | tig0016995:57131-57150 | None:intergenic | 30.0% | |
TGAGAAAGAATCACAAATCA+AGG | + | tig0016995:57132-57151 | None:intergenic | 30.0% | |
TTTGTGATTCTTTCTCAACT+AGG | - | tig0016995:57135-57154 | Msa1360280:CDS | 30.0% | |
TTGAATATACGTACCAAGTT+TGG | + | tig0016995:57382-57401 | None:intergenic | 30.0% | |
ATTCTGATAGGAATTGGAAA+TGG | - | tig0016995:57608-57627 | Msa1360280:intron | 30.0% | |
! | CTTTGGAAATATTCTTCACT+TGG | - | tig0016995:57702-57721 | Msa1360280:CDS | 30.0% |
GTATATATCCAAGATCATCT+TGG | - | tig0016995:57773-57792 | Msa1360280:CDS | 30.0% | |
!!! | GATCTGAGTCTTTTTTATGA+TGG | + | tig0016995:57988-58007 | None:intergenic | 30.0% |
ATTTATTGTTGAACCATCTG+AGG | + | tig0016995:58207-58226 | None:intergenic | 30.0% | |
ATGGTTCAACAATAAATCGT+TGG | - | tig0016995:58210-58229 | Msa1360280:CDS | 30.0% | |
ATCGCAATGTCTATTAACAT+CGG | - | tig0016995:58305-58324 | Msa1360280:intron | 30.0% | |
TGAAATGATATGTCTGTCTA+AGG | + | tig0016995:58360-58379 | None:intergenic | 30.0% | |
!! | AAGTTCAAACTTTGAAGTAC+CGG | - | tig0016995:58379-58398 | Msa1360280:intron | 30.0% |
ATTATAGTAAAAGATCCTGC+CGG | + | tig0016995:58401-58420 | None:intergenic | 30.0% | |
CTTTAGCATCAAAGATAAGA+GGG | - | tig0016995:58474-58493 | Msa1360280:intron | 30.0% | |
!! | CAGCAATTTTTGAGAGTATA+AGG | - | tig0016995:58570-58589 | Msa1360280:intron | 30.0% |
ATTGAAAACACTACTTCAAG+TGG | - | tig0016995:58830-58849 | Msa1360280:intron | 30.0% | |
! | TTCAGTTGAATTTTCCTCAT+TGG | + | tig0016995:59023-59042 | None:intergenic | 30.0% |
TAGTGATGAAACTAGTTCAA+AGG | - | tig0016995:59078-59097 | Msa1360280:intron | 30.0% | |
GAGTTAACTGAATTCAAGAA+TGG | - | tig0016995:59106-59125 | Msa1360280:CDS | 30.0% | |
TTAACTGAATTCAAGAATGG+TGG | - | tig0016995:59109-59128 | Msa1360280:CDS | 30.0% | |
! | TCTAGCAGTAACTCTTTTAT+TGG | - | tig0016995:59245-59264 | Msa1360280:CDS | 30.0% |
TGAGATTAATTTCCAAATCG+TGG | - | tig0016995:59299-59318 | Msa1360280:intron | 30.0% | |
GAGATTAATTTCCAAATCGT+GGG | - | tig0016995:59300-59319 | Msa1360280:intron | 30.0% | |
ATCCATGTGTCATAATCTTA+AGG | + | tig0016995:59512-59531 | None:intergenic | 30.0% | |
AATTAGTATGATACTCGTGT+AGG | - | tig0016995:59557-59576 | Msa1360280:five_prime_UTR | 30.0% | |
ACAAAAACCACAAAGAAGCA+AGG | - | tig0016995:56248-56267 | Msa1360280:three_prime_UTR | 35.0% | |
CAAAAACCACAAAGAAGCAA+GGG | - | tig0016995:56249-56268 | Msa1360280:three_prime_UTR | 35.0% | |
GATACCAATGATAAAAGGCA+TGG | + | tig0016995:56286-56305 | None:intergenic | 35.0% | |
!!! | TTTTGTTGTTGCAGCTAATG+AGG | - | tig0016995:56389-56408 | Msa1360280:three_prime_UTR | 35.0% |
! | TCTTATATTGGTCGATTCCT+AGG | - | tig0016995:56567-56586 | Msa1360280:CDS | 35.0% |
AGGTTCTATTATCAGTTTCC+TGG | - | tig0016995:56599-56618 | Msa1360280:CDS | 35.0% | |
GACAATTCAAAAGGAAGAGA+GGG | + | tig0016995:56787-56806 | None:intergenic | 35.0% | |
TGACAATTCAAAAGGAAGAG+AGG | + | tig0016995:56788-56807 | None:intergenic | 35.0% | |
AATCTATGGCTAAAGTCTGT+GGG | - | tig0016995:57055-57074 | Msa1360280:CDS | 35.0% | |
ATTGTCTTGCCTAAGACATA+TGG | + | tig0016995:57164-57183 | None:intergenic | 35.0% | |
GAAAAAAGTTCCACCAAACT+TGG | - | tig0016995:57366-57385 | Msa1360280:CDS | 35.0% | |
AATATACGTACCAAGTTTGG+TGG | + | tig0016995:57379-57398 | None:intergenic | 35.0% | |
GCGTTAATTCTGATAGGAAT+TGG | - | tig0016995:57602-57621 | Msa1360280:intron | 35.0% | |
TTCCAATAACACTAGAGCTT+TGG | - | tig0016995:57685-57704 | Msa1360280:CDS | 35.0% | |
! | TTCCAAAGCTCTAGTGTTAT+TGG | + | tig0016995:57690-57709 | None:intergenic | 35.0% |
ATATCCAAGATCATCTTGGT+TGG | - | tig0016995:57777-57796 | Msa1360280:CDS | 35.0% | |
! | TTTTCCAACCAAGATGATCT+TGG | + | tig0016995:57784-57803 | None:intergenic | 35.0% |
GATCATCTTGGTTGGAAAAT+TGG | - | tig0016995:57785-57804 | Msa1360280:CDS | 35.0% | |
!! | CTTGGTTGGAAAATTGGTTT+TGG | - | tig0016995:57791-57810 | Msa1360280:CDS | 35.0% |
AGCAAGAAAGAATAAGACAG+TGG | + | tig0016995:57843-57862 | None:intergenic | 35.0% | |
ATGATGGTAAAATTCAGGTG+AGG | + | tig0016995:57972-57991 | None:intergenic | 35.0% | |
TTGTTCCAACTGATAGACTA+AGG | - | tig0016995:58011-58030 | Msa1360280:CDS | 35.0% | |
GTATACCTTAGTCTATCAGT+TGG | + | tig0016995:58019-58038 | None:intergenic | 35.0% | |
TTATTCCATTGTGGTCAACA+GGG | - | tig0016995:58282-58301 | Msa1360280:intron | 35.0% | |
CCTCTTATCTTTGATGCTAA+AGG | + | tig0016995:58476-58495 | None:intergenic | 35.0% | |
CCTTTAGCATCAAAGATAAG+AGG | - | tig0016995:58473-58492 | Msa1360280:intron | 35.0% | |
TATCAGTCCGAAGATAAGAA+TGG | - | tig0016995:58508-58527 | Msa1360280:intron | 35.0% | |
ATCAGTCCGAAGATAAGAAT+GGG | - | tig0016995:58509-58528 | Msa1360280:intron | 35.0% | |
TGTTGAAAATGTCTGCAATG+TGG | - | tig0016995:58639-58658 | Msa1360280:intron | 35.0% | |
GAAACACTAGACATAGTCTT+TGG | + | tig0016995:58746-58765 | None:intergenic | 35.0% | |
AAAAGAAGACACCAAGTTTC+CGG | + | tig0016995:58798-58817 | None:intergenic | 35.0% | |
TCCAAAGTGAGTGAAGAAAA+TGG | - | tig0016995:58995-59014 | Msa1360280:intron | 35.0% | |
! | ACCATTTTCTTCACTCACTT+TGG | + | tig0016995:58999-59018 | None:intergenic | 35.0% |
TGAAGAAAATGGTTCCAATG+AGG | - | tig0016995:59006-59025 | Msa1360280:intron | 35.0% | |
! | CAATCCACAAATTGATGACA+AGG | - | tig0016995:59054-59073 | Msa1360280:intron | 35.0% |
CTAACCTTGTCATCAATTTG+TGG | + | tig0016995:59061-59080 | None:intergenic | 35.0% | |
TAGTGAAGAAAATGGCTTGA+AGG | - | tig0016995:59156-59175 | Msa1360280:CDS | 35.0% | |
TACGATAGAAGGCTTATAGT+TGG | - | tig0016995:59187-59206 | Msa1360280:CDS | 35.0% | |
TGGTATGTCTCTGAATGTAT+TGG | + | tig0016995:59214-59233 | None:intergenic | 35.0% | |
ACTGCTAGAAAGAATGTCAT+TGG | + | tig0016995:59234-59253 | None:intergenic | 35.0% | |
CACCTTAAGATTATGACACA+TGG | - | tig0016995:59507-59526 | Msa1360280:CDS | 35.0% | |
TGCTGCTGATGAAGAAGAAA+TGG | - | tig0016995:56218-56237 | Msa1360280:three_prime_UTR | 40.0% | |
! | GTCACCATGCCTTTTATCAT+TGG | - | tig0016995:56279-56298 | Msa1360280:three_prime_UTR | 40.0% |
GCAATAAAAGCAGCAACAAC+AGG | + | tig0016995:56543-56562 | None:intergenic | 40.0% | |
TAGAACCTATTCCAACACCT+AGG | + | tig0016995:56587-56606 | None:intergenic | 40.0% | |
GAATCTATGGCTAAAGTCTG+TGG | - | tig0016995:57054-57073 | Msa1360280:CDS | 40.0% | |
ACTAGGACTCCATATGTCTT+AGG | - | tig0016995:57152-57171 | Msa1360280:CDS | 40.0% | |
TATAGGGAATGTCAATGCTG+TGG | - | tig0016995:57480-57499 | Msa1360280:CDS | 40.0% | |
TTTGCTGATATACAGCCTTC+AGG | + | tig0016995:57554-57573 | None:intergenic | 40.0% | |
ATCAGCAAAACCAGGTCAAA+TGG | - | tig0016995:57565-57584 | Msa1360280:intron | 40.0% | |
! | AGTAACATTGCCATTTGACC+TGG | + | tig0016995:57578-57597 | None:intergenic | 40.0% |
CTCTCTGCGTTAATTCTGAT+AGG | - | tig0016995:57596-57615 | Msa1360280:intron | 40.0% | |
CTGATAGGAATTGGAAATGG+TGG | - | tig0016995:57611-57630 | Msa1360280:intron | 40.0% | |
TGCTATGACAGCTATAGTTG+TGG | + | tig0016995:57738-57757 | None:intergenic | 40.0% | |
! | AATTCAGGTGAGGTTTTCGA+TGG | + | tig0016995:57962-57981 | None:intergenic | 40.0% |
GAACAAGATATAGCCTCAGA+TGG | - | tig0016995:58191-58210 | Msa1360280:CDS | 40.0% | |
GTTATTCCATTGTGGTCAAC+AGG | - | tig0016995:58281-58300 | Msa1360280:intron | 40.0% | |
GCAATGTCTATTAACATCGG+AGG | - | tig0016995:58308-58327 | Msa1360280:intron | 40.0% | |
CCAAGTCCCATTCTTATCTT+CGG | + | tig0016995:58518-58537 | None:intergenic | 40.0% | |
CGAAGATAAGAATGGGACTT+GGG | - | tig0016995:58516-58535 | Msa1360280:intron | 40.0% | |
AAGGAGAAAGAGAGCAATTC+AGG | - | tig0016995:58589-58608 | Msa1360280:intron | 40.0% | |
ATACCAGCCAAACAAAGTGA+AGG | + | tig0016995:58671-58690 | None:intergenic | 40.0% | |
! | GCTGAGGCATTCAATGTTAT+TGG | - | tig0016995:58692-58711 | Msa1360280:intron | 40.0% |
GAAAACACTACTTCAAGTGG+AGG | - | tig0016995:58833-58852 | Msa1360280:intron | 40.0% | |
ACTTCAAGTGGAGGAAAAGA+TGG | - | tig0016995:58842-58861 | Msa1360280:intron | 40.0% | |
CTTCAAGTGGAGGAAAAGAT+GGG | - | tig0016995:58843-58862 | Msa1360280:intron | 40.0% | |
TTAGTATGCAGTTGGGCTTA+TGG | - | tig0016995:58953-58972 | Msa1360280:intron | 40.0% | |
TTGGATACTTGATCAGCTGT+AGG | + | tig0016995:58980-58999 | None:intergenic | 40.0% | |
TGAATTCAAGAATGGTGGTC+AGG | - | tig0016995:59114-59133 | Msa1360280:CDS | 40.0% | |
TGAAGAAAATGGCTTGAAGG+AGG | - | tig0016995:59159-59178 | Msa1360280:CDS | 40.0% | |
AGGAGGAATAGTACGATAGA+AGG | - | tig0016995:59176-59195 | Msa1360280:CDS | 40.0% | |
CACATGTCACATGTGTTTCA+CGG | - | tig0016995:59326-59345 | Msa1360280:intron | 40.0% | |
ACATGTCACATGTGTTTCAC+GGG | - | tig0016995:59327-59346 | Msa1360280:intron | 40.0% | |
!! | TTTATGAAGGAGGAGTGCTA+TGG | + | tig0016995:59386-59405 | None:intergenic | 40.0% |
TGTCATGACACCCTAATAGT+CGG | + | tig0016995:59583-59602 | None:intergenic | 40.0% | |
AAACCACAAAGAAGCAAGGG+TGG | - | tig0016995:56252-56271 | Msa1360280:three_prime_UTR | 45.0% | |
! | TAATGAGGCACTTGCTAGGA+TGG | - | tig0016995:56404-56423 | Msa1360280:three_prime_UTR | 45.0% |
GAGTAGCTGTAGCAAGATGA+AGG | + | tig0016995:56482-56501 | None:intergenic | 45.0% | |
TGTGAAATTTCCAGCTGCAG+AGG | + | tig0016995:56520-56539 | None:intergenic | 45.0% | |
! | ATTGGTCGATTCCTAGGTGT+TGG | - | tig0016995:56573-56592 | Msa1360280:CDS | 45.0% |
!! | CGATTCCTAGGTGTTGGAAT+AGG | - | tig0016995:56579-56598 | Msa1360280:CDS | 45.0% |
GGCTGTATATCAGCAAAACC+AGG | - | tig0016995:57557-57576 | Msa1360280:intron | 45.0% | |
GCTGTCATAGCAGCTCTATT+TGG | - | tig0016995:57746-57765 | Msa1360280:CDS | 45.0% | |
! | GATATAAGCATGAGTGCTGC+TGG | + | tig0016995:57821-57840 | None:intergenic | 45.0% |
ATTAACATCGGAGGCTCGTT+TGG | - | tig0016995:58317-58336 | Msa1360280:intron | 45.0% | |
!! | TCAAACTTTGAAGTACCGGC+AGG | - | tig0016995:58383-58402 | Msa1360280:intron | 45.0% |
ATCTTCGGACTGATACTCAC+TGG | + | tig0016995:58503-58522 | None:intergenic | 45.0% | |
CCGAAGATAAGAATGGGACT+TGG | - | tig0016995:58515-58534 | Msa1360280:intron | 45.0% | |
AGAAAGAGAGCAATTCAGGC+AGG | - | tig0016995:58593-58612 | Msa1360280:intron | 45.0% | |
GCTTGCACCTTCACTTTGTT+TGG | - | tig0016995:58661-58680 | Msa1360280:intron | 45.0% | |
TTGTTTGGCTGGTATAGCTG+AGG | - | tig0016995:58676-58695 | Msa1360280:intron | 45.0% | |
AGTGTTTCTTCAGCACTCTC+TGG | - | tig0016995:58758-58777 | Msa1360280:intron | 45.0% | |
TTCTTCAGCACTCTCTGGAT+TGG | - | tig0016995:58763-58782 | Msa1360280:intron | 45.0% | |
CGTGAAACACATGTGACATG+TGG | + | tig0016995:59328-59347 | None:intergenic | 45.0% | |
!!! | TAATATTATATATTCATTTT+TGG | - | tig0016995:56622-56641 | Msa1360280:CDS | 5.0% |
!!! | ATCATTTTTTAATTTTAAAA+AGG | + | tig0016995:57308-57327 | None:intergenic | 5.0% |
AGACCACCCTTGCTTCTTTG+TGG | + | tig0016995:56258-56277 | None:intergenic | 50.0% | |
! | CAGCTAATGAGGCACTTGCT+AGG | - | tig0016995:56400-56419 | Msa1360280:three_prime_UTR | 50.0% |
CTTGCTAGGATGGCAAGTAC+TGG | - | tig0016995:56414-56433 | Msa1360280:three_prime_UTR | 50.0% | |
!! | AGGATGGCAAGTACTGGACT+TGG | - | tig0016995:56420-56439 | Msa1360280:three_prime_UTR | 50.0% |
CTTCTCATATCCTCTGCAGC+TGG | - | tig0016995:56507-56526 | Msa1360280:three_prime_UTR | 50.0% | |
!! | TCAGGTGGATTGCTGCAAGT+AGG | + | tig0016995:57536-57555 | None:intergenic | 50.0% |
ACTTGCAGCAATCCACCTGA+AGG | - | tig0016995:57536-57555 | Msa1360280:CDS | 50.0% | |
GCTGATATACAGCCTTCAGG+TGG | + | tig0016995:57551-57570 | None:intergenic | 50.0% | |
! | CAAAGAACCAGCTTGCTCAC+TGG | - | tig0016995:57887-57906 | Msa1360280:CDS | 50.0% |
TGCAAAACCAGTGAGCAAGC+TGG | + | tig0016995:57897-57916 | None:intergenic | 50.0% | |
! | GCACCTTCACTTTGTTTGGC+TGG | - | tig0016995:58665-58684 | Msa1360280:intron | 50.0% |
!! | AGCACTCTCTGGATTGGCAA+TGG | - | tig0016995:58769-58788 | Msa1360280:intron | 50.0% |
CAAGTGGAGGAAAAGATGGG+TGG | - | tig0016995:58846-58865 | Msa1360280:intron | 50.0% | |
GACATGTGGTTCCCACGATT+TGG | + | tig0016995:59314-59333 | None:intergenic | 50.0% | |
ACTCGTGTAGGCCGACTATT+AGG | - | tig0016995:59569-59588 | Msa1360280:five_prime_UTR | 50.0% | |
CTCGTGTAGGCCGACTATTA+GGG | - | tig0016995:59570-59589 | Msa1360280:five_prime_UTR | 50.0% | |
!! | GGTGGATTGCTGCAAGTAGG+AGG | + | tig0016995:57533-57552 | None:intergenic | 55.0% |
GCGATCCCTGTTGACCACAA+TGG | + | tig0016995:58290-58309 | None:intergenic | 55.0% | |
!! | TCTGGATTGGCAATGGCTGC+CGG | - | tig0016995:58776-58795 | Msa1360280:intron | 55.0% |
AAGTAGGAGGCTGCGTCGCT+GGG | + | tig0016995:57520-57539 | None:intergenic | 60.0% | |
GGCAATGGCTGCCGGAAACT+TGG | - | tig0016995:58784-58803 | Msa1360280:intron | 60.0% | |
AGGCTGCGTCGCTGGGATCA+TGG | + | tig0016995:57513-57532 | None:intergenic | 65.0% | |
CAAGTAGGAGGCTGCGTCGC+TGG | + | tig0016995:57521-57540 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0016995 | gene | 56111 | 59604 | 56111 | ID=Msa1360280;Name=Msa1360280 |
tig0016995 | mRNA | 56111 | 59604 | 56111 | ID=Msa1360280-mRNA-1;Parent=Msa1360280;Name=Msa1360280-mRNA-1;_AED=0.12;_eAED=0.12;_QI=75|1|1|1|1|1|4|418|636 |
tig0016995 | exon | 56111 | 57558 | 56111 | ID=Msa1360280-mRNA-1:exon:11830;Parent=Msa1360280-mRNA-1 |
tig0016995 | exon | 57683 | 58230 | 57683 | ID=Msa1360280-mRNA-1:exon:11829;Parent=Msa1360280-mRNA-1 |
tig0016995 | exon | 59095 | 59312 | 59095 | ID=Msa1360280-mRNA-1:exon:11828;Parent=Msa1360280-mRNA-1 |
tig0016995 | exon | 59415 | 59604 | 59415 | ID=Msa1360280-mRNA-1:exon:11827;Parent=Msa1360280-mRNA-1 |
tig0016995 | five_prime_UTR | 59530 | 59604 | 59530 | ID=Msa1360280-mRNA-1:five_prime_utr;Parent=Msa1360280-mRNA-1 |
tig0016995 | CDS | 59415 | 59529 | 59415 | ID=Msa1360280-mRNA-1:cds;Parent=Msa1360280-mRNA-1 |
tig0016995 | CDS | 59095 | 59312 | 59095 | ID=Msa1360280-mRNA-1:cds;Parent=Msa1360280-mRNA-1 |
tig0016995 | CDS | 57683 | 58230 | 57683 | ID=Msa1360280-mRNA-1:cds;Parent=Msa1360280-mRNA-1 |
tig0016995 | CDS | 56529 | 57558 | 56529 | ID=Msa1360280-mRNA-1:cds;Parent=Msa1360280-mRNA-1 |
tig0016995 | three_prime_UTR | 56111 | 56528 | 56111 | ID=Msa1360280-mRNA-1:three_prime_utr;Parent=Msa1360280-mRNA-1 |
Gene Sequence |
Protein sequence |