AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1128790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128790 MtrunA17_Chr7g0273281 95.825 503 10 3 1 493 1 502 0.0 962
Msa1128790 MtrunA17_Chr4g0066581 56.466 464 195 3 29 489 30 489 0.0 530
Msa1128790 MtrunA17_Chr2g0286721 53.879 464 209 2 26 488 26 485 4.38e-177 506
Msa1128790 MtrunA17_Chr7g0259471 51.549 452 219 0 37 488 24 475 2.15e-162 468
Msa1128790 MtrunA17_Chr7g0259221 52.212 452 216 0 37 488 26 477 9.80e-162 466
Msa1128790 MtrunA17_Chr1g0155221 46.723 473 234 3 17 483 25 485 4.76e-143 419
Msa1128790 MtrunA17_Chr8g0373181 47.816 435 222 2 58 487 52 486 1.78e-139 410
Msa1128790 MtrunA17_Chr7g0273261 80.973 226 41 1 262 487 15 238 1.09e-129 377
Msa1128790 MtrunA17_Chr8g0373191 44.419 439 219 3 53 486 39 457 6.08e-119 357
Msa1128790 MtrunA17_Chr7g0273271 77.419 186 40 1 49 232 21 206 6.63e-100 299
Msa1128790 MtrunA17_Chr6g0457781 33.063 493 288 13 20 490 74 546 1.51e-71 236
Msa1128790 MtrunA17_Chr7g0250881 32.657 493 298 13 16 490 30 506 2.53e-71 235
Msa1128790 MtrunA17_Chr5g0404191 45.267 243 131 1 27 269 26 266 3.70e-70 226
Msa1128790 MtrunA17_Chr4g0021771 30.279 502 305 10 11 483 14 499 1.96e-65 220
Msa1128790 MtrunA17_Chr2g0282031 33.107 441 275 7 60 483 60 497 2.94e-60 206
Msa1128790 MtrunA17_Chr4g0032021 31.076 502 299 12 18 486 67 554 1.53e-58 202
Msa1128790 MtrunA17_Chr1g0213631 34.271 391 228 8 113 483 48 429 2.56e-56 194
Msa1128790 MtrunA17_Chr1g0213611 31.857 474 281 13 39 483 65 525 3.10e-56 196
Msa1128790 MtrunA17_Chr4g0039651 30.041 486 302 9 31 484 19 498 1.22e-55 193
Msa1128790 MtrunA17_Chr7g0214451 31.545 466 289 11 39 483 20 476 1.34e-52 185
Msa1128790 MtrunA17_Chr4g0034681 29.376 497 308 13 21 486 7 491 5.68e-52 184
Msa1128790 MtrunA17_Chr3g0144361 28.427 496 317 8 22 486 3 491 1.38e-51 182
Msa1128790 MtrunA17_Chr4g0036021 28.384 458 301 6 58 488 32 489 1.47e-49 177
Msa1128790 MtrunA17_Chr4g0004821 29.661 472 304 9 28 486 16 472 2.77e-49 176
Msa1128790 MtrunA17_Chr6g0486021 27.721 487 316 10 22 486 14 486 2.29e-48 173
Msa1128790 MtrunA17_Chr6g0485661 28.571 483 304 11 29 478 28 502 5.08e-47 170
Msa1128790 MtrunA17_Chr5g0432581 28.976 459 290 8 58 483 24 479 5.32e-47 170
Msa1128790 MtrunA17_Chr8g0373531 27.731 476 299 10 62 493 15 489 4.56e-44 162
Msa1128790 MtrunA17_Chr1g0205691 30.688 378 247 5 118 482 108 483 2.69e-43 160
Msa1128790 MtrunA17_Chr5g0394341 27.792 403 276 5 93 482 83 483 4.18e-43 160
Msa1128790 MtrunA17_Chr3g0119401 25.657 495 328 11 22 490 56 536 1.37e-42 159
Msa1128790 MtrunA17_Chr5g0420841 29.268 410 265 9 93 483 82 485 1.10e-41 155
Msa1128790 MtrunA17_Chr3g0085971 30.244 410 261 8 93 483 82 485 1.10e-41 155
Msa1128790 MtrunA17_Chr3g0078791 27.407 405 257 7 93 482 28 410 1.58e-40 151
Msa1128790 MtrunA17_Chr4g0048411 28.184 479 297 10 51 489 21 492 1.07e-39 150
Msa1128790 MtrunA17_Chr1g0205671 24.694 490 322 9 28 482 6 483 2.28e-39 149
Msa1128790 MtrunA17_Chr3g0115721 25.806 403 285 5 93 482 82 483 4.86e-39 148
Msa1128790 MtrunA17_Chr3g0128171 26.471 408 277 7 93 482 36 438 7.44e-39 147
Msa1128790 MtrunA17_Chr8g0390521 27.021 470 316 8 37 483 3 468 1.21e-38 147
Msa1128790 MtrunA17_Chr8g0390141 27.970 404 273 8 93 482 86 485 1.32e-38 147
Msa1128790 MtrunA17_Chr3g0128081 27.924 419 279 7 93 493 83 496 2.59e-38 146
Msa1128790 MtrunA17_Chr5g0403831 27.273 506 318 14 20 490 9 499 1.02e-37 144
Msa1128790 MtrunA17_Chr5g0417611 25.311 482 313 10 40 482 13 486 1.23e-37 144
Msa1128790 MtrunA17_Chr4g0065324 27.494 411 279 7 93 489 88 493 1.57e-37 144
Msa1128790 MtrunA17_Chr5g0437021 27.254 488 315 9 36 489 9 490 1.58e-37 144
Msa1128790 MtrunA17_Chr3g0078971 26.694 487 309 11 35 483 8 484 2.79e-37 143
Msa1128790 MtrunA17_Chr4g0048051 27.447 470 298 8 51 482 21 485 1.18e-36 142
Msa1128790 MtrunA17_Chr8g0390261 27.206 408 271 9 93 482 86 485 1.33e-36 141
Msa1128790 MtrunA17_Chr1g0164851 26.694 487 317 9 37 489 10 490 1.47e-36 142
Msa1128790 MtrunA17_Chr1g0164871 26.489 487 318 9 37 489 10 490 1.93e-36 141
Msa1128790 MtrunA17_Chr1g0205681 25.971 412 284 7 91 486 82 488 2.71e-36 140
Msa1128790 MtrunA17_Chr5g0404181 50.769 130 56 2 364 487 5 132 5.31e-36 130
Msa1128790 MtrunA17_Chr4g0065311 25.815 399 283 6 95 482 82 478 1.35e-35 138
Msa1128790 MtrunA17_Chr3g0115741 24.570 407 285 6 93 482 85 486 3.80e-35 137
Msa1128790 MtrunA17_Chr6g0486681 29.469 414 254 12 93 482 86 485 6.95e-35 136
Msa1128790 MtrunA17_Chr6g0486671 29.469 414 254 12 93 482 86 485 6.95e-35 136
Msa1128790 MtrunA17_Chr3g0121674 30.000 280 182 6 213 482 7 282 4.26e-34 130
Msa1128790 MtrunA17_Chr2g0303731 29.217 332 217 7 63 377 36 366 1.20e-33 134
Msa1128790 MtrunA17_Chr2g0303731 35.185 108 69 1 386 492 452 559 3.52e-13 72.0
Msa1128790 MtrunA17_Chr3g0115711 24.876 402 289 6 93 482 82 482 2.18e-33 132
Msa1128790 MtrunA17_Chr3g0115751 25.926 405 282 8 93 482 87 488 1.10e-32 130
Msa1128790 MtrunA17_Chr2g0290181 29.371 286 180 6 111 377 88 370 1.68e-32 130
Msa1128790 MtrunA17_Chr2g0290181 36.190 105 66 1 385 488 454 558 2.24e-13 72.4
Msa1128790 MtrunA17_Chr3g0115781 23.284 408 291 5 93 483 84 486 3.26e-32 129
Msa1128790 MtrunA17_Chr3g0078991 24.843 479 323 11 38 483 11 485 7.91e-32 128
Msa1128790 MtrunA17_Chr2g0303701 28.522 291 185 7 113 389 89 370 1.51e-31 127
Msa1128790 MtrunA17_Chr8g0376611 28.720 289 193 5 102 377 11 299 2.17e-30 124
Msa1128790 MtrunA17_Chr8g0376611 34.259 108 70 1 386 492 382 489 4.08e-13 71.6
Msa1128790 MtrunA17_Chr5g0445601 26.316 399 281 6 95 482 88 484 2.20e-30 124
Msa1128790 MtrunA17_Chr8g0376631 30.651 261 166 6 109 355 85 344 1.74e-29 122
Msa1128790 MtrunA17_Chr8g0376631 34.821 112 64 2 386 492 451 558 4.72e-13 71.6
Msa1128790 MtrunA17_Chr8g0376601 28.920 287 184 6 115 387 91 371 4.37e-29 120
Msa1128790 MtrunA17_Chr8g0376601 40.217 92 54 1 386 476 450 541 2.56e-12 69.3
Msa1128790 MtrunA17_Chr7g0257631 25.815 399 283 6 95 482 122 518 2.03e-28 118
Msa1128790 MtrunA17_Chr7g0221631 60.759 79 30 1 375 453 40 117 1.66e-27 106
Msa1128790 MtrunA17_Chr3g0115731 26.132 287 203 3 204 482 177 462 4.71e-26 110
Msa1128790 MtrunA17_Chr4g0065351 25.697 323 227 6 171 482 1 321 6.20e-23 100
Msa1128790 MtrunA17_Chr5g0419321 33.178 214 118 4 287 482 525 731 8.69e-23 102
Msa1128790 MtrunA17_Chr5g0419321 30.500 200 129 4 66 258 49 245 6.91e-19 90.1
Msa1128790 MtrunA17_Chr2g0290161 27.376 263 153 6 111 359 21 259 1.09e-22 100
Msa1128790 MtrunA17_Chr8g0370151 33.036 224 131 4 274 482 125 344 2.68e-22 98.2
Msa1128790 MtrunA17_Chr3g0146061 32.127 221 125 5 280 482 510 723 4.10e-22 100
Msa1128790 MtrunA17_Chr3g0146061 35.032 157 95 2 101 250 54 210 1.41e-16 82.8
Msa1128790 MtrunA17_Chr3g0144261 35.610 205 119 5 81 277 32 231 8.11e-22 99.0
Msa1128790 MtrunA17_Chr3g0144261 31.222 221 113 6 287 482 507 713 3.81e-18 87.8
Msa1128790 MtrunA17_Chr5g0407441 31.429 210 127 3 287 482 499 705 1.60e-20 95.1
Msa1128790 MtrunA17_Chr5g0407441 34.810 158 95 3 108 258 61 217 2.73e-17 85.1
Msa1128790 MtrunA17_Chr7g0259451 72.000 50 14 0 402 451 1 50 4.13e-19 80.9
Msa1128790 MtrunA17_Chr5g0434261 27.097 310 167 9 213 476 7 303 4.50e-18 85.1
Msa1128790 MtrunA17_Chr5g0434231 30.263 152 87 1 97 248 9 141 4.28e-15 72.8
Msa1128790 MtrunA17_Chr8g0370141 31.285 179 110 5 108 278 61 234 2.58e-14 74.7
Msa1128790 MtrunA17_Chr2g0319001 24.938 401 250 18 102 474 133 510 1.40e-13 73.2
Msa1128790 MtrunA17_Chr5g0434251 34.259 108 70 1 386 492 38 145 2.47e-13 67.8
Msa1128790 MtrunA17_Chr5g0446681 27.922 154 95 1 39 192 8 145 4.59e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128790 AT1G54730.2 67.442 430 140 0 58 487 37 466 0.0 598
Msa1128790 AT1G54730.5 63.023 430 138 1 58 487 37 445 0.0 547
Msa1128790 AT1G54730.3 66.499 397 133 0 58 454 37 433 0.0 544
Msa1128790 AT2G48020.2 54.110 438 201 0 50 487 25 462 2.58e-174 498
Msa1128790 AT2G48020.1 54.110 438 201 0 50 487 25 462 2.58e-174 498
Msa1128790 AT1G54730.4 61.713 397 131 1 58 454 37 412 9.15e-173 493
Msa1128790 AT5G18840.1 52.542 472 217 2 20 490 17 482 5.14e-171 491
Msa1128790 AT1G54730.9 65.833 360 123 0 58 417 37 396 1.50e-170 487
Msa1128790 AT1G54730.7 65.833 360 123 0 58 417 37 396 1.50e-170 487
Msa1128790 AT3G05150.1 49.356 466 226 2 29 484 2 467 1.15e-158 459
Msa1128790 AT3G05150.3 49.356 466 226 2 29 484 2 467 1.15e-158 459
Msa1128790 AT3G05150.2 49.356 466 226 2 29 484 2 467 1.83e-158 459
Msa1128790 AT3G05165.3 47.537 467 240 2 26 490 4 467 4.24e-157 455
Msa1128790 AT3G05165.2 47.537 467 240 2 26 490 4 467 4.24e-157 455
Msa1128790 AT3G05165.1 47.537 467 240 2 26 490 4 467 4.24e-157 455
Msa1128790 AT3G05160.1 47.021 470 237 2 21 490 1 458 3.23e-155 449
Msa1128790 AT3G05155.1 50.112 447 219 2 42 487 16 459 7.92e-154 446
Msa1128790 AT1G08930.1 48.966 435 222 0 55 489 60 494 9.61e-154 447
Msa1128790 AT1G08930.2 48.966 435 222 0 55 489 60 494 9.61e-154 447
Msa1128790 AT3G05400.1 48.539 445 229 0 42 486 15 459 1.26e-153 446
Msa1128790 AT1G08920.1 50.691 434 214 0 55 488 34 467 1.26e-153 446
Msa1128790 AT5G27360.1 47.505 461 242 0 26 486 8 468 1.02e-152 444
Msa1128790 AT5G27360.3 47.505 461 242 0 26 486 56 516 7.73e-152 444
Msa1128790 AT1G08920.2 49.660 441 215 1 55 488 34 474 2.11e-151 441
Msa1128790 AT1G54730.8 60.556 360 121 1 58 417 37 375 7.81e-151 436
Msa1128790 AT5G27350.1 49.556 450 223 1 41 486 15 464 9.05e-151 439
Msa1128790 AT3G05160.3 49.633 409 206 0 82 490 1 409 2.08e-147 428
Msa1128790 AT3G05160.2 49.633 409 206 0 82 490 1 409 2.08e-147 428
Msa1128790 AT3G20460.1 44.720 483 261 2 5 487 11 487 1.21e-144 424
Msa1128790 AT4G04750.1 46.383 470 246 2 30 493 9 478 8.61e-144 421
Msa1128790 AT4G04750.2 46.383 470 246 2 30 493 9 478 8.61e-144 421
Msa1128790 AT1G54730.11 66.779 298 99 0 58 355 37 334 3.43e-143 414
Msa1128790 AT4G04750.3 46.681 467 243 2 30 490 53 519 3.43e-143 421
Msa1128790 AT1G08890.1 48.889 450 228 2 38 486 12 460 4.46e-143 419
Msa1128790 AT1G08900.1 47.097 465 236 2 24 486 2 458 1.57e-142 417
Msa1128790 AT1G08900.2 47.097 465 236 2 24 486 2 458 1.57e-142 417
Msa1128790 AT4G04760.1 48.966 435 219 1 53 484 31 465 3.73e-142 417
Msa1128790 AT3G05165.6 46.636 431 225 2 26 454 4 431 7.94e-141 415
Msa1128790 AT3G05400.2 46.067 445 220 1 42 486 15 439 5.38e-140 410
Msa1128790 AT1G75220.1 47.149 456 230 3 37 484 32 484 2.30e-137 405
Msa1128790 AT1G19450.1 46.070 458 232 3 37 484 33 485 4.70e-137 404
Msa1128790 AT1G08920.3 49.874 397 199 0 55 451 34 430 8.53e-137 402
Msa1128790 AT1G08900.5 48.558 416 214 0 71 486 1 416 4.82e-136 399
Msa1128790 AT1G08900.3 46.022 465 233 3 24 486 2 450 2.37e-135 399
Msa1128790 AT4G04760.3 49.261 406 203 1 82 484 1 406 6.90e-134 394
Msa1128790 AT3G05165.4 45.823 419 222 2 26 442 4 419 2.54e-132 392
Msa1128790 AT3G05165.5 45.823 419 222 2 26 442 4 419 2.54e-132 392
Msa1128790 AT5G27360.2 50.275 364 181 0 123 486 1 364 4.12e-129 380
Msa1128790 AT5G27360.5 50.275 364 181 0 123 486 1 364 4.12e-129 380
Msa1128790 AT4G04760.2 46.453 437 224 3 53 484 31 462 1.86e-128 382
Msa1128790 AT1G54730.10 63.830 282 102 0 58 339 37 318 1.13e-127 374
Msa1128790 AT1G54730.6 63.830 282 102 0 58 339 37 318 1.13e-127 374
Msa1128790 AT1G08900.4 46.047 430 222 2 24 451 2 423 7.82e-127 376
Msa1128790 AT2G48020.4 51.297 347 168 1 48 393 22 368 3.00e-124 368
Msa1128790 AT5G27360.4 40.835 431 238 1 26 456 8 421 1.13e-114 345
Msa1128790 AT2G48020.3 51.935 310 148 1 48 356 22 331 1.82e-111 334
Msa1128790 AT3G05155.2 49.045 314 157 1 42 355 16 326 1.14e-102 311
Msa1128790 AT5G16150.2 32.854 487 298 11 20 490 73 546 5.17e-67 225
Msa1128790 AT5G16150.1 32.854 487 298 11 20 490 73 546 5.17e-67 225
Msa1128790 AT5G16150.3 32.854 487 298 11 20 490 73 546 5.17e-67 225
Msa1128790 AT2G20780.1 30.408 490 318 7 11 483 14 497 1.04e-64 218
Msa1128790 AT5G17010.1 31.388 497 301 12 21 484 11 500 2.84e-58 201
Msa1128790 AT5G17010.3 31.388 497 301 12 21 484 11 500 2.84e-58 201
Msa1128790 AT5G17010.4 31.388 497 301 12 21 484 11 500 2.84e-58 201
Msa1128790 AT2G20780.2 31.616 427 270 6 84 493 28 449 9.08e-58 199
Msa1128790 AT3G03090.1 32.186 494 285 14 29 484 19 500 7.76e-56 194
Msa1128790 AT2G43330.1 32.061 393 235 9 113 483 94 476 1.00e-53 189
Msa1128790 AT5G59250.1 29.960 504 309 10 16 486 64 556 9.50e-53 187
Msa1128790 AT2G16130.1 29.424 469 295 7 58 493 31 496 2.80e-50 179
Msa1128790 AT1G67300.2 28.723 470 317 8 29 486 27 490 3.97e-50 179
Msa1128790 AT3G18830.1 28.884 457 292 8 58 483 41 495 6.00e-50 179
Msa1128790 AT1G67300.1 28.602 472 314 9 29 486 27 489 8.48e-50 178
Msa1128790 AT1G67300.3 28.602 472 314 9 29 486 27 489 8.48e-50 178
Msa1128790 AT2G16120.1 28.571 476 297 8 58 493 31 503 8.08e-49 176
Msa1128790 AT1G79820.2 31.042 451 278 10 58 490 59 494 4.06e-46 168
Msa1128790 AT1G79820.1 31.042 451 278 10 58 490 59 494 4.06e-46 168
Msa1128790 AT4G36670.1 29.060 468 295 8 58 492 22 485 5.71e-45 165
Msa1128790 AT1G05030.1 27.044 477 321 8 35 490 51 521 6.23e-45 165
Msa1128790 AT2G18480.1 27.171 449 291 8 67 483 36 480 1.09e-43 161
Msa1128790 AT1G05030.2 28.536 403 273 6 97 490 73 469 1.51e-43 160
Msa1128790 AT1G11260.1 27.049 488 306 11 35 482 8 485 3.69e-43 160
Msa1128790 AT1G67300.6 28.058 417 278 8 29 432 27 434 2.71e-42 156
Msa1128790 AT1G67300.7 28.058 417 278 8 29 432 27 434 2.71e-42 156
Msa1128790 AT5G26340.1 26.915 483 310 9 36 482 9 484 3.81e-41 155
Msa1128790 AT1G67300.4 28.256 407 270 8 29 422 27 424 5.46e-41 152
Msa1128790 AT1G67300.5 28.256 407 270 8 29 422 27 424 5.46e-41 152
Msa1128790 AT5G26250.1 28.325 406 276 6 93 486 81 483 1.62e-39 150
Msa1128790 AT1G79820.4 30.946 391 242 8 58 433 59 436 3.24e-39 148
Msa1128790 AT4G21480.1 26.653 484 312 11 44 489 12 490 1.17e-37 144
Msa1128790 AT5G23270.1 25.971 489 312 9 34 482 8 486 1.07e-36 142
Msa1128790 AT3G19940.1 26.238 404 281 6 93 482 85 485 1.26e-36 142
Msa1128790 AT3G05960.1 27.094 406 281 6 93 486 80 482 2.12e-36 141
Msa1128790 AT1G50310.1 24.678 466 307 7 55 482 27 486 1.78e-35 139
Msa1128790 AT3G19930.1 25.726 482 310 11 40 483 13 484 8.12e-34 134
Msa1128790 AT3G19930.2 25.726 482 310 11 40 483 13 484 8.12e-34 134
Msa1128790 AT1G07340.1 28.218 404 272 8 93 482 82 481 9.90e-34 133
Msa1128790 AT4G02050.2 25.581 473 317 8 40 482 17 484 1.02e-33 134
Msa1128790 AT4G02050.1 25.581 473 317 8 40 482 17 484 1.02e-33 134
Msa1128790 AT5G17010.2 26.358 497 258 12 22 485 17 438 2.52e-33 131
Msa1128790 AT2G35740.1 30.903 288 173 8 97 362 73 356 1.20e-32 131
Msa1128790 AT2G35740.1 37.864 103 63 1 386 487 458 560 7.21e-14 74.3
Msa1128790 AT1G79820.3 29.018 448 243 12 58 490 59 446 4.27e-32 128
Msa1128790 AT1G77210.2 26.733 404 278 8 93 482 86 485 1.33e-31 127
Msa1128790 AT1G77210.1 26.733 404 278 8 93 482 86 485 1.33e-31 127
Msa1128790 AT1G34580.2 27.681 401 267 8 95 476 35 431 4.36e-31 125
Msa1128790 AT1G34580.1 27.273 407 273 8 95 482 85 487 9.08e-31 125
Msa1128790 AT1G30220.1 30.116 259 166 6 115 359 93 350 4.25e-30 124
Msa1128790 AT1G30220.1 37.963 108 66 1 386 492 455 562 2.76e-14 75.9
Msa1128790 AT4G16480.2 30.137 292 172 6 113 380 90 373 1.06e-29 122
Msa1128790 AT4G16480.2 36.893 103 64 1 386 487 459 561 7.76e-14 74.3
Msa1128790 AT4G16480.3 30.137 292 172 6 113 380 90 373 1.06e-29 122
Msa1128790 AT4G16480.3 36.893 103 64 1 386 487 459 561 7.76e-14 74.3
Msa1128790 AT4G16480.1 30.137 292 172 6 113 380 90 373 1.06e-29 122
Msa1128790 AT4G16480.1 36.893 103 64 1 386 487 459 561 7.76e-14 74.3
Msa1128790 AT1G50310.2 25.298 336 227 5 165 482 14 343 8.17e-28 114
Msa1128790 AT5G61520.2 24.814 403 282 7 95 482 43 439 8.24e-28 116
Msa1128790 AT5G61520.1 24.814 403 282 7 95 482 91 487 1.76e-27 115
Msa1128790 AT1G77210.3 27.596 337 218 9 164 482 8 336 8.53e-27 111
Msa1128790 AT3G51490.2 30.876 217 119 4 287 482 510 716 2.64e-22 101
Msa1128790 AT3G51490.2 33.333 165 102 3 101 258 54 217 4.67e-17 84.7
Msa1128790 AT3G51490.3 30.876 217 119 4 287 482 460 666 2.68e-22 100
Msa1128790 AT3G51490.3 33.333 165 102 3 101 258 4 167 4.58e-17 84.7
Msa1128790 AT4G35300.5 33.019 212 121 4 287 482 319 525 4.71e-22 99.8
Msa1128790 AT4G35300.9 33.019 212 121 4 287 482 506 712 9.51e-22 99.4
Msa1128790 AT4G35300.9 35.152 165 99 3 101 258 54 217 6.73e-18 87.4
Msa1128790 AT4G35300.2 33.019 212 121 4 287 482 506 712 9.51e-22 99.4
Msa1128790 AT4G35300.2 35.152 165 99 3 101 258 54 217 6.73e-18 87.4
Msa1128790 AT4G35300.3 33.019 212 121 4 287 482 506 712 9.51e-22 99.4
Msa1128790 AT4G35300.3 35.152 165 99 3 101 258 54 217 6.73e-18 87.4
Msa1128790 AT4G35300.4 33.019 212 121 4 287 482 516 722 1.01e-21 99.4
Msa1128790 AT4G35300.4 35.152 165 99 3 101 258 54 217 7.04e-18 87.4
Msa1128790 AT4G35300.8 33.019 212 121 4 287 482 516 722 1.01e-21 99.4
Msa1128790 AT4G35300.8 35.152 165 99 3 101 258 54 217 7.04e-18 87.4
Msa1128790 AT4G35300.6 33.019 212 121 4 287 482 516 722 1.01e-21 99.4
Msa1128790 AT4G35300.6 35.152 165 99 3 101 258 54 217 7.04e-18 87.4
Msa1128790 AT4G35300.11 33.019 212 121 4 287 482 516 722 1.01e-21 99.4
Msa1128790 AT4G35300.11 35.152 165 99 3 101 258 54 217 7.04e-18 87.4
Msa1128790 AT4G35300.1 33.019 212 121 4 287 482 516 722 1.01e-21 99.4
Msa1128790 AT4G35300.1 35.152 165 99 3 101 258 54 217 7.04e-18 87.4
Msa1128790 AT4G35300.10 33.019 212 121 4 287 482 516 722 1.01e-21 99.4
Msa1128790 AT4G35300.10 35.152 165 99 3 101 258 54 217 7.04e-18 87.4
Msa1128790 AT4G35300.7 33.019 212 121 4 287 482 516 722 1.01e-21 99.4
Msa1128790 AT4G35300.7 35.152 165 99 3 101 258 54 217 7.04e-18 87.4
Msa1128790 AT1G79820.5 28.011 357 186 11 146 490 87 384 2.00e-19 90.5
Msa1128790 AT1G20840.2 32.243 214 120 4 287 482 509 715 2.47e-19 92.0
Msa1128790 AT1G20840.2 31.604 212 137 3 54 258 5 215 2.67e-19 91.7
Msa1128790 AT1G20840.1 32.243 214 120 4 287 482 509 715 2.47e-19 92.0
Msa1128790 AT1G20840.1 31.604 212 137 3 54 258 5 215 2.67e-19 91.7
Msa1128790 AT3G51490.1 31.100 209 121 5 287 482 510 708 6.70e-19 90.5
Msa1128790 AT3G51490.1 33.333 165 102 3 101 258 54 217 4.88e-17 84.7
Msa1128790 AT1G54730.1 61.290 62 24 0 104 165 1 62 1.49e-17 77.4

Find 135 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACAGAAGCTAGCATTAT+TGG 0.138915 7_3:-80682055 Msa1128790:CDS
TGGTTAACTGGTTGTGTTCT+TGG 0.201533 7_3:-80680469 Msa1128790:CDS
TTTCCCACTTGCACCAATTT+TGG 0.205928 7_3:-80684588 Msa1128790:five_prime_UTR
AATTGGTGCAAGTGGGAAAT+TGG 0.217196 7_3:+80684592 None:intergenic
TCGCAGCTATTCTGCATTTC+CGG 0.219947 7_3:-80683817 Msa1128790:CDS
GCTTGGTCAGGAACTTTCTT+TGG 0.221471 7_3:-80679340 Msa1128790:intron
ATGTCATTAACTTATCTTAT+TGG 0.231801 7_3:-80682629 Msa1128790:CDS
ATTCGTGAATTGGCGGATTT+TGG 0.244475 7_3:-80682603 Msa1128790:CDS
TAGATTCCAATGACAACTTT+AGG 0.254435 7_3:-80681542 Msa1128790:CDS
GAAGGAAGTCAGTCCTATTT+TGG 0.254766 7_3:-80681029 Msa1128790:CDS
GCTTAGTAACCTTGGTTAAC+TGG 0.280940 7_3:-80680481 Msa1128790:CDS
TGCAGACTGATTGTAAATAA+AGG 0.291409 7_3:-80679159 Msa1128790:three_prime_UTR
CTTATCTATGACAGGGTTAT+CGG 0.312591 7_3:-80681707 Msa1128790:intron
AGCCCTATCATTCTTCTTGC+AGG 0.314275 7_3:-80681358 Msa1128790:intron
ACCAGCCACCTAGGAGAATC+TGG 0.321718 7_3:+80682436 None:intergenic
TATAGCAATGGTTGCTGTTA+AGG 0.322955 7_3:-80681671 Msa1128790:intron
GCAGAACCCTTAACGTTAAT+AGG 0.326086 7_3:+80680509 None:intergenic
GATATTTCCTATTAACGTTA+AGG 0.338316 7_3:-80680516 Msa1128790:CDS
TCTTCTTTACAGCGCCTTAG+AGG 0.344154 7_3:-80682248 Msa1128790:CDS
TAGGCATGGGAGCAATTCCC+TGG 0.346639 7_3:-80680664 Msa1128790:CDS
CCTAGGAGAATCTGGGATAA+AGG 0.348990 7_3:+80682444 None:intergenic
TCTGCAGTGGGAACTTGTTT+AGG 0.349129 7_3:-80681393 Msa1128790:CDS
CTACGGCTGCGCTGGCTGAC+TGG 0.355238 7_3:+80684654 None:intergenic
AAATTAAAAGAGCTAGTAAA+TGG 0.356511 7_3:+80684510 None:intergenic
ACACCAACAAGCGCCAAAAT+AGG 0.356691 7_3:+80681016 None:intergenic
CATCAGCATTCTTCCCTCTA+AGG 0.356717 7_3:+80682234 None:intergenic
CTTCATTGAATTTGAATTCA+AGG 0.361984 7_3:+80679228 None:intergenic
CTCATGACTTGGAGTTCAAC+AGG 0.367309 7_3:-80680422 Msa1128790:intron
GAACCTGCAAGAAGAATGAT+AGG 0.373125 7_3:+80681355 None:intergenic
ATTATATACTCTGATTTCAT+TGG 0.373273 7_3:+80682199 None:intergenic
ATCTACACATTCGTTGAAAT+AGG 0.373493 7_3:-80679011 Msa1128790:three_prime_UTR
TTATTGGTGCATTCGTGAAT+TGG 0.377156 7_3:-80682613 Msa1128790:CDS
ATATTTCCTATTAACGTTAA+GGG 0.381371 7_3:-80680515 Msa1128790:CDS
TTATGCAGGACATACATAAA+TGG 0.381934 7_3:-80681051 Msa1128790:intron
TTGTTTGTGTTGTTGATGAT+TGG 0.388354 7_3:+80684348 None:intergenic
ATCGCATTCTACGGCTGCGC+TGG 0.407410 7_3:+80684646 None:intergenic
GGGATTCACCGCAGTTCATC+AGG 0.417828 7_3:-80682798 Msa1128790:intron
TTTGGCGCTTGTTGGTGTAC+TGG 0.422650 7_3:-80681011 Msa1128790:intron
CTAGGAGAATCTGGGATAAA+GGG 0.424434 7_3:+80682445 None:intergenic
AATACTCCTAAAGTTGTCAT+TGG 0.427438 7_3:+80681536 None:intergenic
GTTATTTCTGCTATATAAAC+CGG 0.437448 7_3:+80682839 None:intergenic
TGATCTTGTGCAGGCAAAGA+TGG 0.438959 7_3:-80682291 Msa1128790:intron
ATAACGCCAAAGAATCTTAG+AGG 0.443505 7_3:-80682821 Msa1128790:CDS
TAGCTTCTGTTTGTTGCTGA+AGG 0.445371 7_3:+80682065 None:intergenic
TTTGGATTCGCTGCCATATG+TGG 0.445434 7_3:-80679322 Msa1128790:CDS
TTCTTCTAGTGTACGCCCCT+TGG 0.449622 7_3:+80679261 None:intergenic
AGTGTACGCCCCTTGGTCTC+AGG 0.451408 7_3:+80679268 None:intergenic
ATGGTGGTGTTGACCAAAAT+TGG 0.452796 7_3:+80684575 None:intergenic
TACTTTGCTTAGGTAGGACT+CGG 0.456160 7_3:-80681918 Msa1128790:intron
GTGGTAAGTGTGAGAGTAGG+AGG 0.461073 7_3:+80684310 None:intergenic
TTCGGTTCAATATTGACCAT+TGG 0.469336 7_3:-80684003 Msa1128790:CDS
TTGACCATTGGAGCAATGAT+TGG 0.470163 7_3:-80683991 Msa1128790:CDS
CTTCAATAGAGTCGTTGAAA+AGG 0.471548 7_3:+80678827 None:intergenic
CCTCAATCTTACTGTTGCAC+AGG 0.472592 7_3:-80684124 Msa1128790:intron
AATTCTATATTTATATCAGC+TGG 0.473324 7_3:-80681843 Msa1128790:intron
CCCAGATTCTCCTAGGTGGC+TGG 0.473747 7_3:-80682437 Msa1128790:intron
GTATTTGTTTAAAGGATGCT+TGG 0.474738 7_3:-80683017 Msa1128790:intron
GGCAAAGATGGGTCGCTTGA+AGG 0.478645 7_3:-80682279 Msa1128790:CDS
AGCTTCTGTTTGTTGCTGAA+GGG 0.478927 7_3:+80682066 None:intergenic
GCAGACCTTTGCGATTGTAA+TGG 0.481664 7_3:+80683786 None:intergenic
ATTAACGTTAAGGGTTCTGC+TGG 0.481935 7_3:-80680506 Msa1128790:CDS
AAAACTGGTTCCTGAGACCA+AGG 0.482339 7_3:-80679278 Msa1128790:CDS
GACAGCTAATGATCTGTTGT+GGG 0.484232 7_3:-80682652 Msa1128790:intron
GTTAATGGCCAGGTATATGT+TGG 0.484675 7_3:-80680698 Msa1128790:intron
TGCTGGAAGCTTAGTAACCT+TGG 0.485413 7_3:-80680489 Msa1128790:CDS
CCTTTATCCCAGATTCTCCT+AGG 0.486068 7_3:-80682444 Msa1128790:CDS
TTGATGATACTACAACAGTT+TGG 0.487126 7_3:-80681894 Msa1128790:CDS
AGTGTGAGAGTAGGAGGTGA+AGG 0.490349 7_3:+80684316 None:intergenic
GGCTGCGCTGGCTGACTGGA+TGG 0.494885 7_3:+80684658 None:intergenic
TCATGATTCTAGCTTGAGTA+GGG 0.497312 7_3:+80684151 None:intergenic
GATTGTAATGGCAAGCCATC+CGG 0.497527 7_3:+80683798 None:intergenic
GAAAGCAGGAAAATCGCATT+AGG 0.499840 7_3:-80679103 Msa1128790:three_prime_UTR
AAACTTATTACCAGTAAAAG+TGG 0.501367 7_3:+80681488 None:intergenic
TAAAACAGTGAAGCCACATA+TGG 0.501577 7_3:+80679309 None:intergenic
ATGATTGGTGCCATTGTTAG+TGG 0.503985 7_3:-80683976 Msa1128790:CDS
TTTGTTTAAAGGATGCTTGG+TGG 0.520168 7_3:-80683014 Msa1128790:intron
ATGATACTACAACAGTTTGG+AGG 0.521727 7_3:-80681891 Msa1128790:CDS
AGCTATTCTGCATTTCCGGA+TGG 0.524694 7_3:-80683813 Msa1128790:CDS
GGATCTTACTCGCTAGGCAT+GGG 0.528311 7_3:-80680677 Msa1128790:CDS
TATGTTGGATCTTACTCGCT+AGG 0.536109 7_3:-80680683 Msa1128790:CDS
CTCAGAAGTTGTACAAGACA+TGG 0.536926 7_3:+80682472 None:intergenic
ACAGGGTTATCGGAGAGTAT+TGG 0.538331 7_3:-80681697 Msa1128790:intron
TTGGTGCATTCGTGAATTGG+CGG 0.542017 7_3:-80682610 Msa1128790:CDS
CTGTTGGTAGGATGTGGAAT+TGG 0.542973 7_3:-80682976 Msa1128790:CDS
TGTTATGCTGAGCAGGCCAT+GGG 0.544608 7_3:-80683844 Msa1128790:intron
AGGGTGGTAAGTGTGAGAGT+AGG 0.547066 7_3:+80684307 None:intergenic
GAATGCTGATGTTTATAAAG+AGG 0.549236 7_3:-80682222 Msa1128790:CDS
AATTGGCCTGCTATCTTATG+TGG 0.552218 7_3:-80682959 Msa1128790:intron
TGGATCTTACTCGCTAGGCA+TGG 0.552527 7_3:-80680678 Msa1128790:CDS
GCTTTACATTGGAAGACTGT+TGG 0.555098 7_3:-80682992 Msa1128790:CDS
GATGCTTGGTGGCTTTACAT+TGG 0.556159 7_3:-80683003 Msa1128790:CDS
CCAGCCACCTAGGAGAATCT+GGG 0.560891 7_3:+80682437 None:intergenic
GGCACCAATCATTGCTCCAA+TGG 0.561415 7_3:+80683987 None:intergenic
GAATATTGAAAATAAATGAA+TGG 0.563471 7_3:+80684556 None:intergenic
AAATTACCACATAAGATAGC+AGG 0.564200 7_3:+80682953 None:intergenic
CTTTAACAGTTGTCTGCAGT+GGG 0.564528 7_3:-80681405 Msa1128790:intron
TGATACTACAACAGTTTGGA+GGG 0.566349 7_3:-80681890 Msa1128790:CDS
TGCTATTGTACCACTAACAA+TGG 0.570005 7_3:+80683966 None:intergenic
TGACAGCTAATGATCTGTTG+TGG 0.570658 7_3:-80682653 Msa1128790:intron
CTTCTTTACAGCGCCTTAGA+GGG 0.575020 7_3:-80682247 Msa1128790:CDS
TCTTTAACAGTTGTCTGCAG+TGG 0.576108 7_3:-80681406 Msa1128790:intron
ATCATGATTCTAGCTTGAGT+AGG 0.576117 7_3:+80684150 None:intergenic
TAACGCCAAAGAATCTTAGA+GGG 0.580791 7_3:-80682820 Msa1128790:CDS
ACATTGCATATCGCATTCTA+CGG 0.584991 7_3:+80684637 None:intergenic
AAACAAATCAGTAATCATCA+TGG 0.586036 7_3:-80684476 Msa1128790:exon
TTGACCAAAATTGGTGCAAG+TGG 0.592921 7_3:+80684584 None:intergenic
TACCTCAGACATTATAACCC+AGG 0.595151 7_3:+80680646 None:intergenic
CAACAGTTTGGAGGGATCAA+CGG 0.597476 7_3:-80681882 Msa1128790:CDS
CAACAACTCACCAGCCACCT+AGG 0.599750 7_3:+80682427 None:intergenic
GATCTTGTGCAGGCAAAGAT+GGG 0.601236 7_3:-80682290 Msa1128790:intron
GGAAGACTGTTGGTAGGATG+TGG 0.603779 7_3:-80682982 Msa1128790:CDS
TACATTGGAAGACTGTTGGT+AGG 0.609151 7_3:-80682988 Msa1128790:CDS
GCAGGACATACATAAATGGA+AGG 0.614430 7_3:-80681047 Msa1128790:intron
ACCTCAGACATTATAACCCA+GGG 0.614558 7_3:+80680647 None:intergenic
ACGTTACCTCGGAAAAGAAG+AGG 0.615557 7_3:+80684418 None:intergenic
ATTGTGATTCAACGTTACCT+CGG 0.621262 7_3:+80684407 None:intergenic
TTATCCCAGATTCTCCTAGG+TGG 0.635109 7_3:-80682441 Msa1128790:CDS
GAATAGCTGCGAGAATCCCA+TGG 0.635839 7_3:+80683828 None:intergenic
AGGCATGGGAGCAATTCCCT+GGG 0.644562 7_3:-80680663 Msa1128790:CDS
GAGTATTGGAACTATAGCAA+TGG 0.647929 7_3:-80681683 Msa1128790:CDS
TCCCTGGGTTATAATGTCTG+AGG 0.650945 7_3:-80680648 Msa1128790:intron
TATTGAAAATAAATGAATGG+TGG 0.651906 7_3:+80684559 None:intergenic
GCTTGCCATTACAATCGCAA+AGG 0.653984 7_3:-80683791 Msa1128790:intron
AACTGGTTCCTGAGACCAAG+GGG 0.654505 7_3:-80679276 Msa1128790:CDS
CCTGTGCAACAGTAAGATTG+AGG 0.658261 7_3:+80684124 None:intergenic
CATGATTCTAGCTTGAGTAG+GGG 0.669832 7_3:+80684152 None:intergenic
AACGCCAAAGAATCTTAGAG+GGG 0.669984 7_3:-80682819 Msa1128790:CDS
ACGCCAAAGAATCTTAGAGG+GGG 0.670184 7_3:-80682818 Msa1128790:CDS
AAACTGGTTCCTGAGACCAA+GGG 0.673193 7_3:-80679277 Msa1128790:CDS
AACCTGCAAGAAGAATGATA+GGG 0.679626 7_3:+80681356 None:intergenic
TGACCAAAATTGGTGCAAGT+GGG 0.690728 7_3:+80684585 None:intergenic
AGAACACAACCAGTTAACCA+AGG 0.702029 7_3:+80680472 None:intergenic
AGAAGAATGATAGGGCTGCG+AGG 0.713518 7_3:+80681364 None:intergenic
GGTACAATAGCAGATTACGC+TGG 0.729619 7_3:-80683955 Msa1128790:CDS
TTGCTTCACCTGATGAACTG+CGG 0.737737 7_3:+80682790 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATATGAGATTATTAT+AGG + chr7_3:80683538-80683557 None:intergenic 10.0%
!! GAATATTGAAAATAAATGAA+TGG + chr7_3:80678926-80678945 None:intergenic 15.0%
!!! TTTATGTAGTTTTCAATTTT+CGG - chr7_3:80679458-80679477 Msa1128790:intron 15.0%
!!! TTTTTCAGCTTAATTAAATT+TGG - chr7_3:80679604-80679623 Msa1128790:intron 15.0%
!! ATTTATATTAATTCCAAGAA+AGG - chr7_3:80679927-80679946 Msa1128790:intron 15.0%
!! TTTATATTAATTCCAAGAAA+GGG - chr7_3:80679928-80679947 Msa1128790:intron 15.0%
!!! ATTAATTAGAGCATATATTT+TGG + chr7_3:80682158-80682177 None:intergenic 15.0%
!! AATTACATTTATTTGTCAAT+AGG + chr7_3:80682747-80682766 None:intergenic 15.0%
!! TTTACAGTATACATATATTT+AGG + chr7_3:80683909-80683928 None:intergenic 15.0%
!! ACATATAAAAGAAATGAAAT+TGG - chr7_3:80684104-80684123 Msa1128790:intron 15.0%
!! TATTGAAAATAAATGAATGG+TGG + chr7_3:80678923-80678942 None:intergenic 20.0%
!! AAATTAAAAGAGCTAGTAAA+TGG + chr7_3:80678972-80678991 None:intergenic 20.0%
!! AAGTTAAGTTAGAAAGAAAA+TGG + chr7_3:80679247-80679266 None:intergenic 20.0%
!! AAAAGTAGAAATGAAAAGAA+AGG + chr7_3:80679400-80679419 None:intergenic 20.0%
!! TTATATTAATTCCAAGAAAG+GGG - chr7_3:80679929-80679948 Msa1128790:intron 20.0%
!! AGTATTCATTTGTATTCTTT+CGG + chr7_3:80680601-80680620 None:intergenic 20.0%
!! ATGTCATTAACTTATCTTAT+TGG - chr7_3:80680850-80680869 Msa1128790:intron 20.0%
!! ATTATATACTCTGATTTCAT+TGG + chr7_3:80681283-80681302 None:intergenic 20.0%
!!! TGAATCATACTTTTATTTGT+AGG - chr7_3:80681378-80681397 Msa1128790:CDS 20.0%
!! AATTCTATATTTATATCAGC+TGG - chr7_3:80681636-80681655 Msa1128790:intron 20.0%
!! ATTATATGACAAAGAAAAGA+AGG - chr7_3:80681695-80681714 Msa1128790:CDS 20.0%
!! AAAATTTCTTATCTATGACA+GGG - chr7_3:80681765-80681784 Msa1128790:intron 20.0%
!! AATTGTTTGAAGAGAATTAA+GGG + chr7_3:80681901-80681920 None:intergenic 20.0%
!! AAATTGTTTGAAGAGAATTA+AGG + chr7_3:80681902-80681921 None:intergenic 20.0%
!! TGTTAAAGAGTCAAAATATT+GGG + chr7_3:80682062-80682081 None:intergenic 20.0%
!! TTTCAAATGAATTACTAGTA+AGG - chr7_3:80682181-80682200 Msa1128790:intron 20.0%
!!! AATCTCATAAATTTTAAGTC+CGG - chr7_3:80682543-80682562 Msa1128790:intron 20.0%
!!! TTGCCTTTTAATTTTGTTAA+TGG - chr7_3:80682766-80682785 Msa1128790:intron 20.0%
!!! ATATAAATTTTAACGAGTTC+CGG + chr7_3:80682875-80682894 None:intergenic 20.0%
!! ATATTTCCTATTAACGTTAA+GGG - chr7_3:80682964-80682983 Msa1128790:CDS 20.0%
!! TATTATTTCCTAAATGAGTT+AGG - chr7_3:80683189-80683208 Msa1128790:intron 20.0%
!!! ATTATTCACTTAAAAGTGTA+CGG - chr7_3:80683290-80683309 Msa1128790:intron 20.0%
!! AAAAAAAGAGTTAGTTACTA+AGG + chr7_3:80683339-80683358 None:intergenic 20.0%
!! TTTCATAATTTGACAGAAAT+TGG - chr7_3:80683567-80683586 Msa1128790:intron 20.0%
!! TTCATAATTTGACAGAAATT+GGG - chr7_3:80683568-80683587 Msa1128790:intron 20.0%
!! TTTGAAAGAGAATCAAAATT+TGG + chr7_3:80683706-80683725 None:intergenic 20.0%
!!! TCTTTCAAACTTTTTCAAAT+TGG - chr7_3:80683717-80683736 Msa1128790:intron 20.0%
!!! CTTTCAAACTTTTTCAAATT+GGG - chr7_3:80683718-80683737 Msa1128790:intron 20.0%
!!! TTGAAAAAAAAAGTATGCAA+TGG - chr7_3:80683747-80683766 Msa1128790:intron 20.0%
!!! AATTTAACCTTTTTATTGTG+TGG - chr7_3:80684080-80684099 Msa1128790:intron 20.0%
!!! TGTTTTTCTGGAATTTTATT+TGG - chr7_3:80684515-80684534 Msa1128790:five_prime_UTR 20.0%
! AAACAAATCAGTAATCATCA+TGG - chr7_3:80679003-80679022 Msa1128790:three_prime_UTR 25.0%
!!! AATTAACTAGTCTTTTAGGT+TGG + chr7_3:80679789-80679808 None:intergenic 25.0%
!! ACCTAAAAGACTAGTTAATT+AGG - chr7_3:80679789-80679808 Msa1128790:intron 25.0%
!!! ACCTAATTAACTAGTCTTTT+AGG + chr7_3:80679793-80679812 None:intergenic 25.0%
! ATACATAAGAAAGCTTAATG+TGG + chr7_3:80679839-80679858 None:intergenic 25.0%
! TATATTAATTCCAAGAAAGG+GGG - chr7_3:80679930-80679949 Msa1128790:intron 25.0%
!! TGTCATTTAAACAGAACTAA+GGG + chr7_3:80680132-80680151 None:intergenic 25.0%
! ATAAAGTTGGCTACAAAATA+TGG - chr7_3:80680351-80680370 Msa1128790:intron 25.0%
!!! GTTATTTCTGCTATATAAAC+CGG + chr7_3:80680643-80680662 None:intergenic 25.0%
!! AATATTCAGTTACTTTGCTT+AGG - chr7_3:80681551-80681570 Msa1128790:intron 25.0%
! CAAAATTTCTTATCTATGAC+AGG - chr7_3:80681764-80681783 Msa1128790:intron 25.0%
!!! AACTTTAGGAGTATTTTTGA+TGG - chr7_3:80681951-80681970 Msa1128790:intron 25.0%
!!! GTATTTTTGATGGATAAATC+TGG - chr7_3:80681961-80681980 Msa1128790:intron 25.0%
! AAACTTATTACCAGTAAAAG+TGG + chr7_3:80681994-80682013 None:intergenic 25.0%
! CTGTTAAAGAGTCAAAATAT+TGG + chr7_3:80682063-80682082 None:intergenic 25.0%
!! ACTTATTTGAGATTATCCAT+TGG - chr7_3:80682218-80682237 Msa1128790:CDS 25.0%
! GTCATAAAAATGATTTAAGC+TGG - chr7_3:80682719-80682738 Msa1128790:intron 25.0%
! TGGCCATTAACAAAATTAAA+AGG + chr7_3:80682772-80682791 None:intergenic 25.0%
!!! TTTTAATTTTGTTAATGGCC+AGG - chr7_3:80682771-80682790 Msa1128790:intron 25.0%
! GATATTTCCTATTAACGTTA+AGG - chr7_3:80682963-80682982 Msa1128790:CDS 25.0%
!! CTTTTAATCTTCTTATTCCT+CGG - chr7_3:80683088-80683107 Msa1128790:intron 25.0%
! ACTTCCTCAATTTAAATCAA+AGG - chr7_3:80683444-80683463 Msa1128790:intron 25.0%
! CTTCCTCAATTTAAATCAAA+GGG - chr7_3:80683445-80683464 Msa1128790:intron 25.0%
!! AAACCCTTTGATTTAAATTG+AGG + chr7_3:80683451-80683470 None:intergenic 25.0%
!!! AGAAATTGGGTTTTAACAAA+AGG - chr7_3:80683581-80683600 Msa1128790:intron 25.0%
!!! GAAATTGGGTTTTAACAAAA+GGG - chr7_3:80683582-80683601 Msa1128790:intron 25.0%
!!! AAATTGGGTTTTAACAAAAG+GGG - chr7_3:80683583-80683602 Msa1128790:intron 25.0%
! ATAAAGTTTGTGATCCATAT+GGG - chr7_3:80683616-80683635 Msa1128790:intron 25.0%
!! AAAAAAGTATGCAATGGAAA+AGG - chr7_3:80683753-80683772 Msa1128790:intron 25.0%
!! CATTGATTAGAAAAGATAGA+CGG - chr7_3:80683826-80683845 Msa1128790:CDS 25.0%
! ACATATATTTAGGAAGAGTT+AGG + chr7_3:80683899-80683918 None:intergenic 25.0%
! AGAATTTAATTACTGTGCAA+TGG + chr7_3:80683945-80683964 None:intergenic 25.0%
! ATATGTACCACACAATAAAA+AGG + chr7_3:80684090-80684109 None:intergenic 25.0%
! ATTGGTTATTATGTTATGCT+TGG - chr7_3:80684122-80684141 Msa1128790:intron 25.0%
! CTTCATTGAATTTGAATTCA+AGG + chr7_3:80684254-80684273 None:intergenic 25.0%
!!! ATTTTTGGAAGCTTCTTAAT+GGG + chr7_3:80684300-80684319 None:intergenic 25.0%
!!! AATTTTTGGAAGCTTCTTAA+TGG + chr7_3:80684301-80684320 None:intergenic 25.0%
!!! AAAAACAACTGATGATGTTT+TGG + chr7_3:80684502-80684521 None:intergenic 25.0%
!!! TGGAATTTTATTTGGAGTAA+CGG - chr7_3:80684523-80684542 Msa1128790:five_prime_UTR 25.0%
!! TTGTTTGTGTTGTTGATGAT+TGG + chr7_3:80679134-80679153 None:intergenic 30.0%
!!! GTTTTTGGTTCTTACGTTTT+TGG - chr7_3:80679202-80679221 Msa1128790:three_prime_UTR 30.0%
! AAGAGTGAGTTATGATAATG+TGG + chr7_3:80679432-80679451 None:intergenic 30.0%
AGGTCATAACATAAAACTAC+CGG + chr7_3:80679749-80679768 None:intergenic 30.0%
TGTGTGTATAACAAATCTCA+GGG + chr7_3:80680049-80680068 None:intergenic 30.0%
TGTTCCAAAAAAAACAGAGT+AGG + chr7_3:80680072-80680091 None:intergenic 30.0%
GTCATTTAAACAGAACTAAG+GGG + chr7_3:80680131-80680150 None:intergenic 30.0%
!! GTGTCATTTAAACAGAACTA+AGG + chr7_3:80680133-80680152 None:intergenic 30.0%
GATCAACAACAAAGCTTATT+TGG - chr7_3:80680237-80680256 Msa1128790:intron 30.0%
CTGAAACTGATAGATAAAGT+TGG - chr7_3:80680338-80680357 Msa1128790:intron 30.0%
CTTTAAACAAATACCACCAA+AGG + chr7_3:80680456-80680475 None:intergenic 30.0%
! CTTTGGTGGTATTTGTTTAA+AGG - chr7_3:80680454-80680473 Msa1128790:CDS 30.0%
GTATTTGTTTAAAGGATGCT+TGG - chr7_3:80680462-80680481 Msa1128790:CDS 30.0%
AAATTACCACATAAGATAGC+AGG + chr7_3:80680529-80680548 None:intergenic 30.0%
ATACAAATGAATACTTCCCT+TGG - chr7_3:80680606-80680625 Msa1128790:intron 30.0%
!!! GTTCACTCTTTTTTTTGTTG+TGG - chr7_3:80680735-80680754 Msa1128790:intron 30.0%
GCACATATCAAATCTCTATT+TGG - chr7_3:80680795-80680814 Msa1128790:intron 30.0%
!! ATCGTTTTTGTCTTTATCTC+AGG - chr7_3:80680977-80680996 Msa1128790:intron 30.0%
AAAACTTTAGTTGCTTGTGT+AGG + chr7_3:80681116-80681135 None:intergenic 30.0%
GAATGCTGATGTTTATAAAG+AGG - chr7_3:80681257-80681276 Msa1128790:intron 30.0%
ATGCTACTCTTGTGTTAAAA+AGG - chr7_3:80681321-80681340 Msa1128790:intron 30.0%
TACTCTTGTGTTAAAAAGGA+AGG - chr7_3:80681325-80681344 Msa1128790:intron 30.0%
! TTGATGATACTACAACAGTT+TGG - chr7_3:80681585-80681604 Msa1128790:intron 30.0%
TCATCGTCTTATGCAAAATT+AGG + chr7_3:80681873-80681892 None:intergenic 30.0%
TAGATTCCAATGACAACTTT+AGG - chr7_3:80681937-80681956 Msa1128790:intron 30.0%
AATACTCCTAAAGTTGTCAT+TGG + chr7_3:80681946-80681965 None:intergenic 30.0%
CAAAATGCAGCAAAATAAGA+AGG + chr7_3:80682028-80682047 None:intergenic 30.0%
TAGTTACACTTATCTTATGC+AGG - chr7_3:80682414-80682433 Msa1128790:intron 30.0%
TTATGCAGGACATACATAAA+TGG - chr7_3:80682428-80682447 Msa1128790:intron 30.0%
! TTTACTCCATCATTTAGAAC+CGG + chr7_3:80682565-80682584 None:intergenic 30.0%
TGAAAGAATCAAAGAGAACA+AGG + chr7_3:80682678-80682697 None:intergenic 30.0%
TATGACATGACGAAAATACA+AGG + chr7_3:80682705-80682724 None:intergenic 30.0%
GCATGATATGATAAATGGTT+TGG - chr7_3:80682923-80682942 Msa1128790:intron 30.0%
!!! CTTTTAACTTTCTCATGACT+TGG - chr7_3:80683046-80683065 Msa1128790:intron 30.0%
!! TTTTTAGGGAATGAATGAGT+AGG + chr7_3:80683123-80683142 None:intergenic 30.0%
! CCTTATGCTTTCTCTTTTTA+GGG + chr7_3:80683137-80683156 None:intergenic 30.0%
! ACCTTATGCTTTCTCTTTTT+AGG + chr7_3:80683138-80683157 None:intergenic 30.0%
! CCAATTTAATGGATGAGATT+TGG + chr7_3:80683251-80683270 None:intergenic 30.0%
CCAAATCTCATCCATTAAAT+TGG - chr7_3:80683248-80683267 Msa1128790:intron 30.0%
!! TCCATTAAATTGGTTTGATC+TGG - chr7_3:80683258-80683277 Msa1128790:intron 30.0%
TCCAGATCAAACCAATTTAA+TGG + chr7_3:80683262-80683281 None:intergenic 30.0%
!! ATTAAATTGGTTTGATCTGG+AGG - chr7_3:80683261-80683280 Msa1128790:intron 30.0%
GAAACCAGTTTAATTGTACA+TGG + chr7_3:80683379-80683398 None:intergenic 30.0%
TCTATATCCATCATAAGTCA+TGG - chr7_3:80683471-80683490 Msa1128790:intron 30.0%
CATAAAGTTTGTGATCCATA+TGG - chr7_3:80683615-80683634 Msa1128790:intron 30.0%
AATTAACCAATGAGGAATCA+AGG - chr7_3:80683641-80683660 Msa1128790:intron 30.0%
GAAGAAAGAATACCAATGAT+TGG - chr7_3:80683665-80683684 Msa1128790:intron 30.0%
AGAATACCAATGATTGGATT+TGG - chr7_3:80683671-80683690 Msa1128790:intron 30.0%
! CGTCTATCTTTTCTAATCAA+TGG + chr7_3:80683828-80683847 None:intergenic 30.0%
TTATTATGTTATGCTTGGTC+AGG - chr7_3:80684127-80684146 Msa1128790:CDS 30.0%
! TACAATCAGTCTGCAATTTT+TGG + chr7_3:80684315-80684334 None:intergenic 30.0%
TGCAGACTGATTGTAAATAA+AGG - chr7_3:80684320-80684339 Msa1128790:CDS 30.0%
ATCTACACATTCGTTGAAAT+AGG - chr7_3:80684468-80684487 Msa1128790:exon 30.0%
!!! AACATCATCAGTTGTTTTTC+TGG - chr7_3:80684503-80684522 Msa1128790:five_prime_UTR 30.0%
!! GGAATTTTATTTGGAGTAAC+GGG - chr7_3:80684524-80684543 Msa1128790:five_prime_UTR 30.0%
ACATTGCATATCGCATTCTA+CGG + chr7_3:80678845-80678864 None:intergenic 35.0%
ATTGTGATTCAACGTTACCT+CGG + chr7_3:80679075-80679094 None:intergenic 35.0%
! TCATCGCTCATTTTACAGAT+CGG - chr7_3:80679296-80679315 Msa1128790:CDS 35.0%
!! TCATGATTCTAGCTTGAGTA+GGG + chr7_3:80679331-80679350 None:intergenic 35.0%
!! ATCATGATTCTAGCTTGAGT+AGG + chr7_3:80679332-80679351 None:intergenic 35.0%
TTCGGTTCAATATTGACCAT+TGG - chr7_3:80679476-80679495 Msa1128790:intron 35.0%
TGCTATTGTACCACTAACAA+TGG + chr7_3:80679516-80679535 None:intergenic 35.0%
! TCCATTTTATCCACAAATCC+CGG - chr7_3:80679727-80679746 Msa1128790:intron 35.0%
GGTCATAACATAAAACTACC+GGG + chr7_3:80679748-80679767 None:intergenic 35.0%
GTGTGTATAACAAATCTCAG+GGG + chr7_3:80680048-80680067 None:intergenic 35.0%
GTGTGTGTATAACAAATCTC+AGG + chr7_3:80680050-80680069 None:intergenic 35.0%
!!! CACACCTACTCTGTTTTTTT+TGG - chr7_3:80680065-80680084 Msa1128790:intron 35.0%
TGGAACAAATACTTACACCT+TGG - chr7_3:80680085-80680104 Msa1128790:intron 35.0%
TTTAAACAGAACTAAGGGGA+GGG + chr7_3:80680127-80680146 None:intergenic 35.0%
ATTTAAACAGAACTAAGGGG+AGG + chr7_3:80680128-80680147 None:intergenic 35.0%
TTTAAATGACACCCTTCACT+AGG - chr7_3:80680141-80680160 Msa1128790:intron 35.0%
!! ATAAGCTTTGTTGTTGATCG+AGG + chr7_3:80680236-80680255 None:intergenic 35.0%
GCTGATATCTATCTAACCTT+TGG - chr7_3:80680437-80680456 Msa1128790:CDS 35.0%
GATATCTATCTAACCTTTGG+TGG - chr7_3:80680440-80680459 Msa1128790:CDS 35.0%
TTTGTTTAAAGGATGCTTGG+TGG - chr7_3:80680465-80680484 Msa1128790:CDS 35.0%
! AATACTTCCCTTGGTGTAAT+AGG - chr7_3:80680615-80680634 Msa1128790:intron 35.0%
ATAACGCCAAAGAATCTTAG+AGG - chr7_3:80680658-80680677 Msa1128790:CDS 35.0%
TAACGCCAAAGAATCTTAGA+GGG - chr7_3:80680659-80680678 Msa1128790:CDS 35.0%
TATGTCGTCATATCACTTGT+AGG - chr7_3:80680773-80680792 Msa1128790:intron 35.0%
TTATTGGTGCATTCGTGAAT+TGG - chr7_3:80680866-80680885 Msa1128790:intron 35.0%
ATAGGTAACATTCTTCTTCC+TGG - chr7_3:80680904-80680923 Msa1128790:intron 35.0%
! TGTTTTGTGAAAAGAACACC+AGG + chr7_3:80680925-80680944 None:intergenic 35.0%
!! TTGTTGACGAGTTGATTGTT+TGG - chr7_3:80681069-80681088 Msa1128790:intron 35.0%
!! TGTTGACGAGTTGATTGTTT+GGG - chr7_3:80681070-80681089 Msa1128790:intron 35.0%
CAAACAGAAGCTAGCATTAT+TGG - chr7_3:80681424-80681443 Msa1128790:intron 35.0%
CTGCATGAATAGGACTAATT+CGG + chr7_3:80681493-80681512 None:intergenic 35.0%
AGAAGATATGCTGCATGAAT+AGG + chr7_3:80681503-80681522 None:intergenic 35.0%
! TTCAGTTACTTTGCTTAGGT+AGG - chr7_3:80681555-80681574 Msa1128790:intron 35.0%
ATGATACTACAACAGTTTGG+AGG - chr7_3:80681588-80681607 Msa1128790:intron 35.0%
TGATACTACAACAGTTTGGA+GGG - chr7_3:80681589-80681608 Msa1128790:intron 35.0%
CTTATCTATGACAGGGTTAT+CGG - chr7_3:80681772-80681791 Msa1128790:intron 35.0%
!! GAGTATTGGAACTATAGCAA+TGG - chr7_3:80681796-80681815 Msa1128790:intron 35.0%
! TATAGCAATGGTTGCTGTTA+AGG - chr7_3:80681808-80681827 Msa1128790:intron 35.0%
AACCTGCAAGAAGAATGATA+GGG + chr7_3:80682126-80682145 None:intergenic 35.0%
! ATGTTTTCATAAGCTGTCGT+AGG + chr7_3:80682287-80682306 None:intergenic 35.0%
TCCCCATATACGTTGAATTT+CGG - chr7_3:80682508-80682527 Msa1128790:intron 35.0%
TCCGAAATTCAACGTATATG+GGG + chr7_3:80682512-80682531 None:intergenic 35.0%
GTCCGAAATTCAACGTATAT+GGG + chr7_3:80682513-80682532 None:intergenic 35.0%
AGTCCGAAATTCAACGTATA+TGG + chr7_3:80682514-80682533 None:intergenic 35.0%
!! TTAAGTCCGGTTCTAAATGA+TGG - chr7_3:80682556-80682575 Msa1128790:intron 35.0%
GTTCTCTTTGATTCTTTCAC+TGG - chr7_3:80682679-80682698 Msa1128790:intron 35.0%
AGTAAGATCCAACATATACC+TGG + chr7_3:80682792-80682811 None:intergenic 35.0%
GTAGCTTCATCTTAATATGC+CGG - chr7_3:80682853-80682872 Msa1128790:intron 35.0%
CCATTTATCATATCATGCTG+AGG + chr7_3:80682921-80682940 None:intergenic 35.0%
CCTCAGCATGATATGATAAA+TGG - chr7_3:80682918-80682937 Msa1128790:intron 35.0%
! CCCTAAAAAGAGAAAGCATA+AGG - chr7_3:80683134-80683153 Msa1128790:intron 35.0%
AAGAGTTAGTTACTAAGGTG+TGG + chr7_3:80683334-80683353 None:intergenic 35.0%
ATCGCCATGTACAATTAAAC+TGG - chr7_3:80683372-80683391 Msa1128790:intron 35.0%
! ATTAAACTGGTTTCTTCTCC+AGG - chr7_3:80683385-80683404 Msa1128790:intron 35.0%
ATTGAGGAAGTAGCCAATTA+AGG + chr7_3:80683435-80683454 None:intergenic 35.0%
TCCATCATAAGTCATGGATT+CGG - chr7_3:80683477-80683496 Msa1128790:intron 35.0%
! CATTGGTTAATTCTCCCATA+TGG + chr7_3:80683633-80683652 None:intergenic 35.0%
TATGGGAGAATTAACCAATG+AGG - chr7_3:80683633-80683652 Msa1128790:intron 35.0%
ATACCAATGATTGGATTTGG+AGG - chr7_3:80683674-80683693 Msa1128790:intron 35.0%
AAAGATAGACGGATGAGATT+TGG - chr7_3:80683837-80683856 Msa1128790:intron 35.0%
TAAAACAGTGAAGCCACATA+TGG + chr7_3:80684173-80684192 None:intergenic 35.0%
!! TGTTTTATTCGTGGCAAAAC+TGG - chr7_3:80684186-80684205 Msa1128790:intron 35.0%
!! CTTAATGGGTGTTTTGTACA+AGG + chr7_3:80684286-80684305 None:intergenic 35.0%
ATCATCGCCCATAAAAAGAT+GGG - chr7_3:80684354-80684373 Msa1128790:CDS 35.0%
! CTGCTTTCCCATCTTTTTAT+GGG + chr7_3:80684364-80684383 None:intergenic 35.0%
CTTCAATAGAGTCGTTGAAA+AGG + chr7_3:80684655-80684674 None:intergenic 35.0%
AATTGGTGCAAGTGGGAAAT+TGG + chr7_3:80678890-80678909 None:intergenic 40.0%
! TTTCCCACTTGCACCAATTT+TGG - chr7_3:80678891-80678910 Msa1128790:three_prime_UTR 40.0%
TGACCAAAATTGGTGCAAGT+GGG + chr7_3:80678897-80678916 None:intergenic 40.0%
TTGACCAAAATTGGTGCAAG+TGG + chr7_3:80678898-80678917 None:intergenic 40.0%
!! ATGGTGGTGTTGACCAAAAT+TGG + chr7_3:80678907-80678926 None:intergenic 40.0%
AGAACCAAAAACAGCGACAA+GGG + chr7_3:80679194-80679213 None:intergenic 40.0%
AAGAACCAAAAACAGCGACA+AGG + chr7_3:80679195-80679214 None:intergenic 40.0%
!! CATGATTCTAGCTTGAGTAG+GGG + chr7_3:80679330-80679349 None:intergenic 40.0%
TTGACCATTGGAGCAATGAT+TGG - chr7_3:80679488-80679507 Msa1128790:intron 40.0%
!! ATGATTGGTGCCATTGTTAG+TGG - chr7_3:80679503-80679522 Msa1128790:intron 40.0%
! CATTTTGTGTTATGCTGAGC+AGG - chr7_3:80679628-80679647 Msa1128790:intron 40.0%
ACCGGGATTTGTGGATAAAA+TGG + chr7_3:80679731-80679750 None:intergenic 40.0%
CATAAAACTACCGGGATTTG+TGG + chr7_3:80679740-80679759 None:intergenic 40.0%
TGTTATGACCTACACCCATA+AGG - chr7_3:80679758-80679777 Msa1128790:intron 40.0%
!! TTAGGTTGGACTCTCCTTAT+GGG + chr7_3:80679775-80679794 None:intergenic 40.0%
!! TTTAGGTTGGACTCTCCTTA+TGG + chr7_3:80679776-80679795 None:intergenic 40.0%
TAATTCCAAGAAAGGGGGAA+AGG - chr7_3:80679935-80679954 Msa1128790:intron 40.0%
TTAAACAGAACTAAGGGGAG+GGG + chr7_3:80680126-80680145 None:intergenic 40.0%
CCTCAATTACACCTAGTGAA+GGG + chr7_3:80680155-80680174 None:intergenic 40.0%
CCTTCACTAGGTGTAATTGA+GGG - chr7_3:80680153-80680172 Msa1128790:intron 40.0%
CTTCACTAGGTGTAATTGAG+GGG - chr7_3:80680154-80680173 Msa1128790:intron 40.0%
GCTTTACATTGGAAGACTGT+TGG - chr7_3:80680487-80680506 Msa1128790:CDS 40.0%
TACATTGGAAGACTGTTGGT+AGG - chr7_3:80680491-80680510 Msa1128790:CDS 40.0%
! AATTGGCCTGCTATCTTATG+TGG - chr7_3:80680520-80680539 Msa1128790:intron 40.0%
AACGCCAAAGAATCTTAGAG+GGG - chr7_3:80680660-80680679 Msa1128790:CDS 40.0%
!! AATCCCCCTCTAAGATTCTT+TGG + chr7_3:80680667-80680686 None:intergenic 40.0%
TGACAGCTAATGATCTGTTG+TGG - chr7_3:80680826-80680845 Msa1128790:intron 40.0%
GACAGCTAATGATCTGTTGT+GGG - chr7_3:80680827-80680846 Msa1128790:intron 40.0%
!!! ATTCGTGAATTGGCGGATTT+TGG - chr7_3:80680876-80680895 Msa1128790:intron 40.0%
!!! TGGCGGATTTTGGCTATAAT+AGG - chr7_3:80680886-80680905 Msa1128790:intron 40.0%
CTCAGAAGTTGTACAAGACA+TGG + chr7_3:80681010-80681029 None:intergenic 40.0%
! CTAGGAGAATCTGGGATAAA+GGG + chr7_3:80681037-80681056 None:intergenic 40.0%
!! GTTGACGAGTTGATTGTTTG+GGG - chr7_3:80681071-80681090 Msa1128790:intron 40.0%
TTGTTTGGGGATGTATGTGT+TGG - chr7_3:80681084-80681103 Msa1128790:intron 40.0%
TGATACTTGTGATCTTGTGC+AGG - chr7_3:80681179-80681198 Msa1128790:intron 40.0%
! AGCTTCTGTTTGTTGCTGAA+GGG + chr7_3:80681416-80681435 None:intergenic 40.0%
! TAGCTTCTGTTTGTTGCTGA+AGG + chr7_3:80681417-80681436 None:intergenic 40.0%
TACTTTGCTTAGGTAGGACT+CGG - chr7_3:80681561-80681580 Msa1128790:intron 40.0%
TCTTTAACAGTTGTCTGCAG+TGG - chr7_3:80682073-80682092 Msa1128790:CDS 40.0%
CTTTAACAGTTGTCTGCAGT+GGG - chr7_3:80682074-80682093 Msa1128790:CDS 40.0%
GAACCTGCAAGAAGAATGAT+AGG + chr7_3:80682127-80682146 None:intergenic 40.0%
AAGTACTTGCGAGACTGTTA+TGG - chr7_3:80682244-80682263 Msa1128790:CDS 40.0%
GCAGGACATACATAAATGGA+AGG - chr7_3:80682432-80682451 Msa1128790:intron 40.0%
! GAAGGAAGTCAGTCCTATTT+TGG - chr7_3:80682450-80682469 Msa1128790:CDS 40.0%
GTTAATGGCCAGGTATATGT+TGG - chr7_3:80682781-80682800 Msa1128790:intron 40.0%
TATGTTGGATCTTACTCGCT+AGG - chr7_3:80682796-80682815 Msa1128790:intron 40.0%
ACCTCAGACATTATAACCCA+GGG + chr7_3:80682835-80682854 None:intergenic 40.0%
TACCTCAGACATTATAACCC+AGG + chr7_3:80682836-80682855 None:intergenic 40.0%
GCAGAACCCTTAACGTTAAT+AGG + chr7_3:80682973-80682992 None:intergenic 40.0%
ATTAACGTTAAGGGTTCTGC+TGG - chr7_3:80682973-80682992 Msa1128790:CDS 40.0%
GCTTAGTAACCTTGGTTAAC+TGG - chr7_3:80682998-80683017 Msa1128790:CDS 40.0%
AGAACACAACCAGTTAACCA+AGG + chr7_3:80683010-80683029 None:intergenic 40.0%
TGGTTAACTGGTTGTGTTCT+TGG - chr7_3:80683010-80683029 Msa1128790:intron 40.0%
GGAATGAATGAGTAGGAATC+AGG + chr7_3:80683116-80683135 None:intergenic 40.0%
CAACGGATCCTAACTCATTT+AGG + chr7_3:80683200-80683219 None:intergenic 40.0%
GTACATGGCGATAGAAAGAA+TGG + chr7_3:80683364-80683383 None:intergenic 40.0%
! CAGTGTAGAATTTGAGATCC+TGG + chr7_3:80683406-80683425 None:intergenic 40.0%
TACACTGCCATCTCCTTAAT+TGG - chr7_3:80683419-80683438 Msa1128790:intron 40.0%
GAAGTAGCCAATTAAGGAGA+TGG + chr7_3:80683429-80683448 None:intergenic 40.0%
ACCGAATCCATGACTTATGA+TGG + chr7_3:80683481-80683500 None:intergenic 40.0%
TCTTCACCTTGATTCCTCAT+TGG + chr7_3:80683650-80683669 None:intergenic 40.0%
TCTCCTCCAAATCCAATCAT+TGG + chr7_3:80683680-80683699 None:intergenic 40.0%
!! TGGCTTCACTGTTTTATTCG+TGG - chr7_3:80684177-80684196 Msa1128790:intron 40.0%
CATCATCGCCCATAAAAAGA+TGG - chr7_3:80684353-80684372 Msa1128790:CDS 40.0%
! CCTGCTTTCCCATCTTTTTA+TGG + chr7_3:80684365-80684384 None:intergenic 40.0%
CCATAAAAAGATGGGAAAGC+AGG - chr7_3:80684362-80684381 Msa1128790:CDS 40.0%
GAAAGCAGGAAAATCGCATT+AGG - chr7_3:80684376-80684395 Msa1128790:CDS 40.0%
ACGTTACCTCGGAAAAGAAG+AGG + chr7_3:80679064-80679083 None:intergenic 45.0%
CCTGTGCAACAGTAAGATTG+AGG + chr7_3:80679358-80679377 None:intergenic 45.0%
CCTCAATCTTACTGTTGCAC+AGG - chr7_3:80679355-80679374 Msa1128790:intron 45.0%
GGTACAATAGCAGATTACGC+TGG - chr7_3:80679524-80679543 Msa1128790:intron 45.0%
TCGCAGCTATTCTGCATTTC+CGG - chr7_3:80679662-80679681 Msa1128790:intron 45.0%
AGCTATTCTGCATTTCCGGA+TGG - chr7_3:80679666-80679685 Msa1128790:intron 45.0%
GATTGTAATGGCAAGCCATC+CGG + chr7_3:80679684-80679703 None:intergenic 45.0%
GCTTGCCATTACAATCGCAA+AGG - chr7_3:80679688-80679707 Msa1128790:intron 45.0%
GCAGACCTTTGCGATTGTAA+TGG + chr7_3:80679696-80679715 None:intergenic 45.0%
AAAGGGGGAAAGGACTTCTA+TGG - chr7_3:80679945-80679964 Msa1128790:intron 45.0%
GGGAAAGGACTTCTATGGAA+AGG - chr7_3:80679950-80679969 Msa1128790:intron 45.0%
GGAGTGCAATTTCTTCACCA+AGG + chr7_3:80680105-80680124 None:intergenic 45.0%
CCCTTCACTAGGTGTAATTG+AGG - chr7_3:80680152-80680171 Msa1128790:intron 45.0%
CCCTCAATTACACCTAGTGA+AGG + chr7_3:80680156-80680175 None:intergenic 45.0%
!! GCTTTGTTGTTGATCGAGGA+GGG + chr7_3:80680232-80680251 None:intergenic 45.0%
!! AGCTTTGTTGTTGATCGAGG+AGG + chr7_3:80680233-80680252 None:intergenic 45.0%
GATATCAGCAACTGAGCATG+TGG + chr7_3:80680426-80680445 None:intergenic 45.0%
! GATGCTTGGTGGCTTTACAT+TGG - chr7_3:80680476-80680495 Msa1128790:CDS 45.0%
! CTGTTGGTAGGATGTGGAAT+TGG - chr7_3:80680503-80680522 Msa1128790:CDS 45.0%
! TCCCTTGGTGTAATAGGTAC+CGG - chr7_3:80680621-80680640 Msa1128790:intron 45.0%
ACCGGTACCTATTACACCAA+GGG + chr7_3:80680625-80680644 None:intergenic 45.0%
AACCGGTACCTATTACACCA+AGG + chr7_3:80680626-80680645 None:intergenic 45.0%
ACGCCAAAGAATCTTAGAGG+GGG - chr7_3:80680661-80680680 Msa1128790:CDS 45.0%
TTGCTTCACCTGATGAACTG+CGG + chr7_3:80680692-80680711 None:intergenic 45.0%
TTGGTGCATTCGTGAATTGG+CGG - chr7_3:80680869-80680888 Msa1128790:intron 45.0%
! CCTAGGAGAATCTGGGATAA+AGG + chr7_3:80681038-80681057 None:intergenic 45.0%
CCTTTATCCCAGATTCTCCT+AGG - chr7_3:80681035-80681054 Msa1128790:CDS 45.0%
TTATCCCAGATTCTCCTAGG+TGG - chr7_3:80681038-80681057 Msa1128790:CDS 45.0%
TGATCTTGTGCAGGCAAAGA+TGG - chr7_3:80681188-80681207 Msa1128790:intron 45.0%
GATCTTGTGCAGGCAAAGAT+GGG - chr7_3:80681189-80681208 Msa1128790:intron 45.0%
TCTTCTTTACAGCGCCTTAG+AGG - chr7_3:80681231-80681250 Msa1128790:intron 45.0%
CTTCTTTACAGCGCCTTAGA+GGG - chr7_3:80681232-80681251 Msa1128790:intron 45.0%
CATCAGCATTCTTCCCTCTA+AGG + chr7_3:80681248-80681267 None:intergenic 45.0%
CAACAGTTTGGAGGGATCAA+CGG - chr7_3:80681597-80681616 Msa1128790:intron 45.0%
TTATATCAGCTGGTGTGTGC+AGG - chr7_3:80681646-80681665 Msa1128790:intron 45.0%
! ACAGGGTTATCGGAGAGTAT+TGG - chr7_3:80681782-80681801 Msa1128790:intron 45.0%
!! TGGAAGACGACCACTTTTAC+TGG - chr7_3:80681981-80682000 Msa1128790:intron 45.0%
! TCTGCAGTGGGAACTTGTTT+AGG - chr7_3:80682086-80682105 Msa1128790:intron 45.0%
AGCCCTATCATTCTTCTTGC+AGG - chr7_3:80682121-80682140 Msa1128790:intron 45.0%
CTCGCAAGTACTTATGCCAA+TGG + chr7_3:80682237-80682256 None:intergenic 45.0%
!!! AGTCCTATTTTGGCGCTTGT+TGG - chr7_3:80682460-80682479 Msa1128790:CDS 45.0%
ACACCAACAAGCGCCAAAAT+AGG + chr7_3:80682466-80682485 None:intergenic 45.0%
TCCCTGGGTTATAATGTCTG+AGG - chr7_3:80682831-80682850 Msa1128790:CDS 45.0%
CATATCATGCTGAGGAAGTG+AGG + chr7_3:80682913-80682932 None:intergenic 45.0%
TGCTGGAAGCTTAGTAACCT+TGG - chr7_3:80682990-80683009 Msa1128790:CDS 45.0%
! CTCATGACTTGGAGTTCAAC+AGG - chr7_3:80683057-80683076 Msa1128790:intron 45.0%
TCAACTAAACCGTTGACACC+TGG + chr7_3:80683226-80683245 None:intergenic 45.0%
!! CGGATGAGATTTGGTGTCAA+TGG - chr7_3:80683846-80683865 Msa1128790:intron 45.0%
GCTTGGTCAGGAACTTTCTT+TGG - chr7_3:80684139-80684158 Msa1128790:CDS 45.0%
TTTGGATTCGCTGCCATATG+TGG - chr7_3:80684157-80684176 Msa1128790:CDS 45.0%
! AAAACTGGTTCCTGAGACCA+AGG - chr7_3:80684201-80684220 Msa1128790:intron 45.0%
! AAACTGGTTCCTGAGACCAA+GGG - chr7_3:80684202-80684221 Msa1128790:intron 45.0%
! GCAAGTCCTCTTCTTTTCCG+AGG - chr7_3:80679055-80679074 Msa1128790:three_prime_UTR 50.0%
AGTGTGAGAGTAGGAGGTGA+AGG + chr7_3:80679166-80679185 None:intergenic 50.0%
GTGGTAAGTGTGAGAGTAGG+AGG + chr7_3:80679172-80679191 None:intergenic 50.0%
AGGGTGGTAAGTGTGAGAGT+AGG + chr7_3:80679175-80679194 None:intergenic 50.0%
!! ACCACCCTTGTCGCTGTTTT+TGG - chr7_3:80679187-80679206 Msa1128790:three_prime_UTR 50.0%
ACCAAAAACAGCGACAAGGG+TGG + chr7_3:80679191-80679210 None:intergenic 50.0%
GGCACCAATCATTGCTCCAA+TGG + chr7_3:80679495-80679514 None:intergenic 50.0%
TGTTATGCTGAGCAGGCCAT+GGG - chr7_3:80679635-80679654 Msa1128790:intron 50.0%
GAATAGCTGCGAGAATCCCA+TGG + chr7_3:80679654-80679673 None:intergenic 50.0%
TGGACTCTCCTTATGGGTGT+AGG + chr7_3:80679769-80679788 None:intergenic 50.0%
GAAGTCCTTTCCCCCTTTCT+TGG + chr7_3:80679943-80679962 None:intergenic 50.0%
! GGAAGACTGTTGGTAGGATG+TGG - chr7_3:80680497-80680516 Msa1128790:CDS 50.0%
AGAAGAATGATAGGGCTGCG+AGG + chr7_3:80682118-80682137 None:intergenic 50.0%
! TTTGGCGCTTGTTGGTGTAC+TGG - chr7_3:80682468-80682487 Msa1128790:CDS 50.0%
TGGATCTTACTCGCTAGGCA+TGG - chr7_3:80682801-80682820 Msa1128790:CDS 50.0%
GGATCTTACTCGCTAGGCAT+GGG - chr7_3:80682802-80682821 Msa1128790:CDS 50.0%
TGAGTAGGAATCAGGAACCG+AGG + chr7_3:80683108-80683127 None:intergenic 50.0%
AGTTAGGATCCGTTGACACC+AGG - chr7_3:80683205-80683224 Msa1128790:intron 50.0%
TCAATGGTTTCGCTGACACC+TGG - chr7_3:80683862-80683881 Msa1128790:intron 50.0%
AGTTAGGATCCGTTGACACC+AGG + chr7_3:80683205-80683224 None:intergenic 50.0%
! AACTGGTTCCTGAGACCAAG+GGG - chr7_3:80684203-80684222 Msa1128790:intron 50.0%
TTCTTCTAGTGTACGCCCCT+TGG + chr7_3:80684221-80684240 None:intergenic 50.0%
GTGTTATGCTGAGCAGGCCA+TGG - chr7_3:80679634-80679653 Msa1128790:intron 55.0%
GGGATTCACCGCAGTTCATC+AGG - chr7_3:80680681-80680700 Msa1128790:CDS 55.0%
CCAGCCACCTAGGAGAATCT+GGG + chr7_3:80681045-80681064 None:intergenic 55.0%
ACCAGCCACCTAGGAGAATC+TGG + chr7_3:80681046-80681065 None:intergenic 55.0%
CAACAACTCACCAGCCACCT+AGG + chr7_3:80681055-80681074 None:intergenic 55.0%
GGCAAAGATGGGTCGCTTGA+AGG - chr7_3:80681200-80681219 Msa1128790:intron 55.0%
TAGGCATGGGAGCAATTCCC+TGG - chr7_3:80682815-80682834 Msa1128790:CDS 55.0%
AGGCATGGGAGCAATTCCCT+GGG - chr7_3:80682816-80682835 Msa1128790:CDS 55.0%
! CCGTTGACACCTGGTGTCAA+CGG + chr7_3:80683217-80683236 None:intergenic 55.0%
CCGTTGACACCAGGTGTCAA+CGG - chr7_3:80683214-80683233 Msa1128790:intron 55.0%
! TCGCTGACACCTGGTGTCAA+CGG - chr7_3:80683871-80683890 Msa1128790:intron 55.0%
ATCGCATTCTACGGCTGCGC+TGG + chr7_3:80678836-80678855 None:intergenic 60.0%
CCCAGATTCTCCTAGGTGGC+TGG - chr7_3:80681042-80681061 Msa1128790:CDS 60.0%
AGTGTACGCCCCTTGGTCTC+AGG + chr7_3:80684214-80684233 None:intergenic 60.0%
!! GGCTGCGCTGGCTGACTGGA+TGG + chr7_3:80678824-80678843 None:intergenic 70.0%
!! CTACGGCTGCGCTGGCTGAC+TGG + chr7_3:80678828-80678847 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 80678818 80684683 80678818 ID=Msa1128790;Name=Msa1128790
chr7_3 mRNA 80678818 80684683 80678818 ID=Msa1128790-mRNA-1;Parent=Msa1128790;Name=Msa1128790-mRNA-1;_AED=0.34;_eAED=0.34;_QI=204|1|1|1|1|1|18|404|493
chr7_3 exon 80678818 80679352 80678818 ID=Msa1128790-mRNA-1:exon:23217;Parent=Msa1128790-mRNA-1
chr7_3 exon 80680423 80680537 80680423 ID=Msa1128790-mRNA-1:exon:23216;Parent=Msa1128790-mRNA-1
chr7_3 exon 80680649 80680708 80680649 ID=Msa1128790-mRNA-1:exon:23215;Parent=Msa1128790-mRNA-1
chr7_3 exon 80681012 80681065 80681012 ID=Msa1128790-mRNA-1:exon:23214;Parent=Msa1128790-mRNA-1
chr7_3 exon 80681359 80681418 80681359 ID=Msa1128790-mRNA-1:exon:23213;Parent=Msa1128790-mRNA-1
chr7_3 exon 80681499 80681561 80681499 ID=Msa1128790-mRNA-1:exon:23212;Parent=Msa1128790-mRNA-1
chr7_3 exon 80681672 80681715 80681672 ID=Msa1128790-mRNA-1:exon:23211;Parent=Msa1128790-mRNA-1
chr7_3 exon 80681844 80681928 80681844 ID=Msa1128790-mRNA-1:exon:23210;Parent=Msa1128790-mRNA-1
chr7_3 exon 80682021 80682101 80682021 ID=Msa1128790-mRNA-1:exon:23209;Parent=Msa1128790-mRNA-1
chr7_3 exon 80682208 80682300 80682208 ID=Msa1128790-mRNA-1:exon:23208;Parent=Msa1128790-mRNA-1
chr7_3 exon 80682438 80682502 80682438 ID=Msa1128790-mRNA-1:exon:23207;Parent=Msa1128790-mRNA-1
chr7_3 exon 80682594 80682669 80682594 ID=Msa1128790-mRNA-1:exon:23206;Parent=Msa1128790-mRNA-1
chr7_3 exon 80682799 80682864 80682799 ID=Msa1128790-mRNA-1:exon:23205;Parent=Msa1128790-mRNA-1
chr7_3 exon 80682960 80683025 80682960 ID=Msa1128790-mRNA-1:exon:23204;Parent=Msa1128790-mRNA-1
chr7_3 exon 80683792 80683851 80683792 ID=Msa1128790-mRNA-1:exon:23203;Parent=Msa1128790-mRNA-1
chr7_3 exon 80683945 80684034 80683945 ID=Msa1128790-mRNA-1:exon:23202;Parent=Msa1128790-mRNA-1
chr7_3 exon 80684125 80684187 80684125 ID=Msa1128790-mRNA-1:exon:23201;Parent=Msa1128790-mRNA-1
chr7_3 exon 80684270 80684683 80684270 ID=Msa1128790-mRNA-1:exon:23200;Parent=Msa1128790-mRNA-1
chr7_3 five_prime_UTR 80684480 80684683 80684480 ID=Msa1128790-mRNA-1:five_prime_utr;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80684270 80684479 80684270 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80684125 80684187 80684125 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80683945 80684034 80683945 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80683792 80683851 80683792 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80682960 80683025 80682960 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80682799 80682864 80682799 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80682594 80682669 80682594 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80682438 80682502 80682438 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80682208 80682300 80682208 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80682021 80682101 80682021 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80681844 80681928 80681844 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80681672 80681715 80681672 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80681499 80681561 80681499 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80681359 80681418 80681359 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80681012 80681065 80681012 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80680649 80680708 80680649 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80680423 80680537 80680423 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 CDS 80679222 80679352 80679222 ID=Msa1128790-mRNA-1:cds;Parent=Msa1128790-mRNA-1
chr7_3 three_prime_UTR 80678818 80679221 80678818 ID=Msa1128790-mRNA-1:three_prime_utr;Parent=Msa1128790-mRNA-1
Gene Sequence

>Msa1128790

ATGGACAGTAAAAGAATCATCGAATCTTCTTCTGCAAGTCCTCTTCTTTTCCGAGGTAACGTTGAATCACAATCACAACGCTATGATTCTTCTTCTGATGATGTTGCTTCCAATCATCAACAACACAAACAAAAGATTACTCCTTCACCTCCTACTCTCACACTTACCACCCTTGTCGCTGTTTTTGGTTCTTACGTTTTTGGAACTGCTATCGGATATTCATCCCCTACTCAAGCTAGAATCATGATTGACCTCAATCTTACTGTTGCACAGTTTTCAATTTTCGGTTCAATATTGACCATTGGAGCAATGATTGGTGCCATTGTTAGTGGTACAATAGCAGATTACGCTGGTCGTCGTCTTGCCATGGGATTCTCGCAGCTATTCTGCATTTCCGGATGGCTTGCCATTACAATCGCAAAGGATGCTTGGTGGCTTTACATTGGAAGACTGTTGGTAGGATGTGGAATTGGCCTGCTATCTTATGTGGTACCGGTTTATATAGCAGAAATAACGCCAAAGAATCTTAGAGGGGGATTCACCGCAGTTCATCAGCTAATGATCTGTTGTGGGATGTCATTAACTTATCTTATTGGTGCATTCGTGAATTGGCGGATTTTGGCTATAATAGGAATTGTTCCATGTCTTGTACAACTTCTGAGTCTACCCTTTATCCCAGATTCTCCTAGGTGGCTGGCAAAGATGGGTCGCTTGAAGGAGAGTGATTCTTCTTTACAGCGCCTTAGAGGGAAGAATGCTGATGTTTATAAAGAGGCCAATGAAATCAGAGATTATACAGAAGCCCTTCAGCAACAAACAGAAGCTAGCATTATTGGCTTATTTCAATTGCAATATTTGAAGTCACTTACAGTAGGACTCGGCTTGATGATACTACAACAGTTTGGAGGGATCAACGGCATTGTTTTCTACGCGAATTCTATATTTATATCAGCTGGGTTATCGGAGAGTATTGGAACTATAGCAATGGTTGCTGTTAAGATTCCAATGACAACTTTAGGAGTATTTTTGATGGATAAATCTGGAAGACGACCACTTTTACTGTTGTCTGCAGTGGGAACTTGTTTAGGATGCTTCCTCGCAGCCCTATCATTCTTCTTGCAGGACATACATAAATGGAAGGAAGTCAGTCCTATTTTGGCGCTTGTTGGTGTACTGGTATATGTTGGATCTTACTCGCTAGGCATGGGAGCAATTCCCTGGGTTATAATGTCTGAGATATTTCCTATTAACGTTAAGGGTTCTGCTGGAAGCTTAGTAACCTTGGTTAACTGGTTGTGTTCTTGGATTATATCATATGCTTTTAACTTTCTCATGACTTGGAGTTCAACAGGAACTTTCTTTGGATTCGCTGCCATATGTGGCTTCACTGTTTTATTCGTGGCAAAACTGGTTCCTGAGACCAAGGGGCGTACACTAGAAGAAATTCAAGCTTCCTTGAATTCAAATTCAATGAAGAAATGA
Protein sequence

>Msa1128790

MDSKRIIESSSASPLLFRGNVESQSQRYDSSSDDVASNHQQHKQKITPSPPTLTLTTLVAVFGSYVFGTAIGYSSPTQARIMIDLNLTVAQFSIFGSILTIGAMIGAIVSGTIADYAGRRLAMGFSQLFCISGWLAITIAKDAWWLYIGRLLVGCGIGLLSYVVPVYIAEITPKNLRGGFTAVHQLMICCGMSLTYLIGAFVNWRILAIIGIVPCLVQLLSLPFIPDSPRWLAKMGRLKESDSSLQRLRGKNADVYKEANEIRDYTEALQQQTEASIIGLFQLQYLKSLTVGLGLMILQQFGGINGIVFYANSIFISAGLSESIGTIAMVAVKIPMTTLGVFLMDKSGRRPLLLLSAVGTCLGCFLAALSFFLQDIHKWKEVSPILALVGVLVYVGSYSLGMGAIPWVIMSEIFPINVKGSAGSLVTLVNWLCSWIISYAFNFLMTWSSTGTFFGFAAICGFTVLFVAKLVPETKGRTLEEIQASLNSNSMKK*