Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895620 | GAU39387.1 | 82.540 | 315 | 26 | 1 | 1 | 286 | 1 | 315 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895620 | sp|Q9C9X3|ANXD5_ARATH | 48.580 | 317 | 129 | 3 | 1 | 285 | 1 | 315 | 9.14e-105 | 310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895620 | A0A2Z6P9H2 | 82.540 | 315 | 26 | 1 | 1 | 286 | 1 | 315 | 0.0 | 530 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0662460 | Msa0895620 | 0.802005 | 6.889240e-49 | -8.615850e-47 |
| Msa0758520 | Msa0895620 | 0.801905 | 7.221960e-49 | -8.615850e-47 |
| Msa0758570 | Msa0895620 | 0.800197 | 1.613612e-48 | -8.615850e-47 |
| Msa0790920 | Msa0895620 | 0.819183 | 1.327510e-52 | -8.615850e-47 |
| Msa0838870 | Msa0895620 | 0.802527 | 5.377071e-49 | -8.615850e-47 |
| Msa0185100 | Msa0895620 | 0.807466 | 4.984870e-50 | -8.615850e-47 |
| Msa0193190 | Msa0895620 | 0.821969 | 3.043637e-53 | -8.615850e-47 |
| Msa0393100 | Msa0895620 | 0.822523 | 2.263290e-53 | -8.615850e-47 |
| Msa0415640 | Msa0895620 | 0.806385 | 8.440966e-50 | -8.615850e-47 |
| Msa0264680 | Msa0895620 | 0.822607 | 2.164123e-53 | -8.615850e-47 |
| Msa0273070 | Msa0895620 | 0.816792 | 4.606761e-52 | -8.615850e-47 |
| Msa0306310 | Msa0895620 | 0.814182 | 1.754748e-51 | -8.615850e-47 |
| Msa0345980 | Msa0895620 | 0.813268 | 2.789413e-51 | -8.615850e-47 |
| Msa0592660 | Msa0895620 | 0.802197 | 6.289562e-49 | -8.615850e-47 |
| Msa0895620 | Msa0922190 | 0.874361 | 7.174297e-68 | -8.615850e-47 |
| Msa0895620 | Msa1069250 | 0.819226 | 1.298182e-52 | -8.615850e-47 |
| Msa0895620 | Msa1102210 | 0.800026 | 1.748419e-48 | -8.615850e-47 |
| Msa0895620 | Msa1136760 | 0.814070 | 1.858194e-51 | -8.615850e-47 |
| Msa0895620 | Msa1157110 | 0.806830 | 6.799824e-50 | -8.615850e-47 |
| Msa0895620 | Msa1157670 | 0.801942 | 7.095321e-49 | -8.615850e-47 |
| Msa0895620 | Msa1171450 | 0.816742 | 4.727993e-52 | -8.615850e-47 |
| Msa0895620 | Msa1225580 | 0.811948 | 5.421663e-51 | -8.615850e-47 |
| Msa0895620 | Msa1237890 | 0.828745 | 7.578032e-55 | -8.615850e-47 |
| Msa0895620 | Msa1296240 | 0.826536 | 2.570048e-54 | -8.615850e-47 |
| Msa0895620 | Msa1318550 | 0.813489 | 2.493927e-51 | -8.615850e-47 |
| Msa0895620 | Msa1355510 | 0.821187 | 4.614413e-53 | -8.615850e-47 |
| Msa0895620 | Msa1356130 | 0.800907 | 1.155999e-48 | -8.615850e-47 |
| Msa0895620 | Msa1398140 | 0.832010 | 1.206581e-55 | -8.615850e-47 |
| Msa0895620 | Msa1420940 | 0.804963 | 1.678158e-49 | -8.615850e-47 |
| Msa0895620 | Msa1435320 | 0.813826 | 2.102467e-51 | -8.615850e-47 |
| Msa0895620 | Msa1443400 | 0.815381 | 9.516128e-52 | -8.615850e-47 |
| Msa0895620 | Msa1448040 | 0.814830 | 1.261752e-51 | -8.615850e-47 |
| Msa0895620 | Msa1451990 | 0.824457 | 7.988231e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895620 | MtrunA17_Chr6g0479391 | 89.841 | 315 | 3 | 1 | 1 | 286 | 1 | 315 | 0.0 | 523 |
| Msa0895620 | MtrunA17_Chr1g0210981 | 80.317 | 315 | 33 | 1 | 1 | 286 | 1 | 315 | 2.11e-179 | 496 |
| Msa0895620 | MtrunA17_Chr6g0479421 | 79.683 | 315 | 35 | 1 | 1 | 286 | 1 | 315 | 3.35e-179 | 496 |
| Msa0895620 | MtrunA17_Chr6g0479411 | 75.873 | 315 | 47 | 1 | 1 | 286 | 28 | 342 | 1.24e-176 | 491 |
| Msa0895620 | MtrunA17_Chr8g0393281 | 70.064 | 314 | 65 | 1 | 1 | 285 | 1 | 314 | 1.10e-165 | 462 |
| Msa0895620 | MtrunA17_Chr1g0162071 | 54.403 | 318 | 110 | 4 | 1 | 286 | 1 | 315 | 2.95e-117 | 339 |
| Msa0895620 | MtrunA17_Chr8g0352571 | 35.016 | 317 | 170 | 4 | 1 | 283 | 1 | 315 | 4.55e-57 | 186 |
| Msa0895620 | MtrunA17_Chr5g0425971 | 33.861 | 316 | 176 | 5 | 1 | 285 | 1 | 314 | 2.44e-52 | 173 |
| Msa0895620 | MtrunA17_Chr8g0382281 | 34.494 | 316 | 170 | 6 | 1 | 283 | 1 | 312 | 3.42e-52 | 173 |
| Msa0895620 | MtrunA17_Chr8g0352621 | 33.439 | 314 | 174 | 5 | 1 | 283 | 1 | 310 | 1.06e-51 | 172 |
| Msa0895620 | MtrunA17_Chr3g0083921 | 33.866 | 313 | 175 | 4 | 1 | 283 | 1 | 311 | 5.58e-51 | 170 |
| Msa0895620 | MtrunA17_Chr3g0083901 | 32.063 | 315 | 182 | 4 | 1 | 285 | 1 | 313 | 8.84e-51 | 169 |
| Msa0895620 | MtrunA17_Chr8g0352591 | 32.911 | 316 | 169 | 5 | 1 | 286 | 1 | 303 | 5.77e-50 | 167 |
| Msa0895620 | MtrunA17_Chr8g0352611 | 32.372 | 312 | 180 | 3 | 1 | 283 | 1 | 310 | 1.50e-48 | 163 |
| Msa0895620 | MtrunA17_Chr2g0293441 | 31.949 | 313 | 181 | 4 | 1 | 283 | 1 | 311 | 3.95e-48 | 162 |
| Msa0895620 | MtrunA17_Chr8g0352581 | 27.393 | 303 | 176 | 5 | 22 | 283 | 12 | 311 | 1.08e-29 | 114 |
| Msa0895620 | MtrunA17_Chr6g0461141 | 30.216 | 278 | 149 | 8 | 45 | 281 | 34 | 307 | 6.21e-27 | 107 |
| Msa0895620 | MtrunA17_Chr3g0084011 | 48.000 | 75 | 38 | 1 | 1 | 75 | 1 | 74 | 9.96e-14 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0895620 | AT1G68090.1 | 48.580 | 317 | 129 | 3 | 1 | 285 | 1 | 315 | 9.29e-106 | 310 |
| Msa0895620 | AT1G68090.2 | 50.649 | 231 | 109 | 2 | 1 | 228 | 1 | 229 | 1.37e-80 | 244 |
| Msa0895620 | AT5G65020.1 | 36.508 | 315 | 166 | 4 | 1 | 283 | 1 | 313 | 8.94e-64 | 203 |
| Msa0895620 | AT5G10230.1 | 35.331 | 317 | 172 | 4 | 1 | 286 | 1 | 315 | 1.20e-62 | 200 |
| Msa0895620 | AT5G10220.1 | 34.277 | 318 | 176 | 4 | 1 | 286 | 1 | 317 | 2.86e-61 | 197 |
| Msa0895620 | AT1G35720.1 | 33.861 | 316 | 177 | 3 | 1 | 285 | 1 | 315 | 1.08e-54 | 180 |
| Msa0895620 | AT5G65020.2 | 35.172 | 290 | 154 | 4 | 26 | 283 | 11 | 298 | 1.53e-53 | 176 |
| Msa0895620 | AT5G12380.1 | 31.861 | 317 | 176 | 6 | 1 | 283 | 1 | 311 | 2.53e-48 | 163 |
| Msa0895620 | AT2G38760.1 | 29.781 | 319 | 187 | 3 | 1 | 283 | 1 | 318 | 4.04e-42 | 147 |
| Msa0895620 | AT2G38750.1 | 29.470 | 302 | 169 | 9 | 26 | 285 | 19 | 318 | 1.90e-27 | 108 |
| Msa0895620 | AT2G38750.2 | 29.470 | 302 | 169 | 9 | 26 | 285 | 2 | 301 | 1.99e-27 | 108 |
Find 64 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTCGTTCACTGAATATT+TGG | 0.132806 | 6_1:-83709590 | None:intergenic |
| AATGAAGCATCGGGGAATTT+CGG | 0.345214 | 6_1:+83709764 | Msa0895620:CDS |
| GAAATTGAATTAAACACATC+TGG | 0.346566 | 6_1:+83708720 | Msa0895620:CDS |
| CAGTTATACCATTCAAAGTT+TGG | 0.348370 | 6_1:+83708681 | Msa0895620:CDS |
| TGAACGAAGCAGTGCGCATT+TGG | 0.353922 | 6_1:+83709602 | Msa0895620:CDS |
| TTACTTCCGTGGCCGCTTCA+AGG | 0.381428 | 6_1:-83708620 | None:intergenic |
| TCTCTAGGAGAAGGAGGAAT+TGG | 0.392592 | 6_1:-83702599 | None:intergenic |
| TTTGTGCTTTCACAGGATTT+GGG | 0.398969 | 6_1:+83708191 | Msa0895620:intron |
| ATGTTGCTTTGTATTCTTGT+TGG | 0.414709 | 6_1:-83708276 | None:intergenic |
| GCATCACGTGCTGCAGGGTC+AGG | 0.420816 | 6_1:-83708561 | None:intergenic |
| GGAGCTGAAAGGAAAATTAG+AGG | 0.424898 | 6_1:+83708330 | Msa0895620:CDS |
| AACATCTTTGACTAGTGATT+CGG | 0.425606 | 6_1:-83710284 | None:intergenic |
| ATTTCTGCATCACGTGCTGC+AGG | 0.436134 | 6_1:-83708567 | None:intergenic |
| ATCAGACTGCAGTTCTACTT+TGG | 0.440143 | 6_1:+83708535 | Msa0895620:intron |
| CTAATGATAGCACACTCATA+AGG | 0.441949 | 6_1:+83710123 | Msa0895620:CDS |
| CATTAGGAAGTCGCTGGTTG+TGG | 0.443829 | 6_1:+83708590 | Msa0895620:CDS |
| GATAAACGCCAAACTTTGAA+TGG | 0.462297 | 6_1:-83708689 | None:intergenic |
| GCTTTCGAAACGCTTAGTTT+CGG | 0.477988 | 6_1:+83708309 | Msa0895620:CDS |
| CACGTGATGCAGAAATCATT+AGG | 0.480060 | 6_1:+83708574 | Msa0895620:CDS |
| GCAGTAAAGAATGAAGCATC+GGG | 0.483236 | 6_1:+83709755 | Msa0895620:CDS |
| TCGTATTATCATGACATGTA+TGG | 0.483429 | 6_1:+83709636 | Msa0895620:CDS |
| CTGAAACATCAGGCAACTAC+AGG | 0.485303 | 6_1:+83710237 | Msa0895620:CDS |
| TTTAGATATTGTAGTTGGGA+TGG | 0.486564 | 6_1:-83708657 | None:intergenic |
| CAGAAGCCTTGAAGCGGCCA+CGG | 0.489696 | 6_1:+83708614 | Msa0895620:CDS |
| CCTCGAGGCCTTCGTGTCGA+GGG | 0.494196 | 6_1:-83709482 | None:intergenic |
| ACCTCGAGGCCTTCGTGTCG+AGG | 0.495564 | 6_1:-83709483 | None:intergenic |
| CACATCTGGGGATCATCAAA+AGG | 0.499826 | 6_1:+83708734 | Msa0895620:CDS |
| TTTGTATTCTTGTTGGAGGT+AGG | 0.504801 | 6_1:-83708269 | None:intergenic |
| TTGCTTTGTATTCTTGTTGG+AGG | 0.507782 | 6_1:-83708273 | None:intergenic |
| TAATGATAGCACACTCATAA+GGG | 0.514286 | 6_1:+83710124 | Msa0895620:CDS |
| GCAAAGGTTCTGTACAAAGC+GGG | 0.515818 | 6_1:+83709531 | Msa0895620:CDS |
| GCAGTTCACTCTGAAACATC+AGG | 0.517462 | 6_1:+83710227 | Msa0895620:CDS |
| GTTTGGCGTTTATCTCGAGC+AGG | 0.521590 | 6_1:+83708698 | Msa0895620:CDS |
| CTAGGAGAAGGAGGAATTGG+AGG | 0.521648 | 6_1:-83702596 | None:intergenic |
| AAATTGAATTAAACACATCT+GGG | 0.527383 | 6_1:+83708721 | Msa0895620:CDS |
| GGCAGTAAAGAATGAAGCAT+CGG | 0.533124 | 6_1:+83709754 | Msa0895620:intron |
| TAATAGAGAAATTGCTCAGA+AGG | 0.534927 | 6_1:+83709506 | Msa0895620:CDS |
| AACTTGTTAAGATCTTGCTT+AGG | 0.543199 | 6_1:+83709448 | Msa0895620:intron |
| AGTTGCATGGCATCATCTCT+AGG | 0.543315 | 6_1:-83702614 | None:intergenic |
| CGCTTAGTTTCGGAGCTGAA+AGG | 0.547329 | 6_1:+83708319 | Msa0895620:CDS |
| GTATGGTCACTCTTTGAAGA+AGG | 0.567039 | 6_1:+83709653 | Msa0895620:CDS |
| AAAAGCACGGTAAAGTTGCA+TGG | 0.576274 | 6_1:-83702627 | None:intergenic |
| CTCGAGGCCTTCGTGTCGAG+GGG | 0.578942 | 6_1:-83709481 | None:intergenic |
| TGCAAAGGTTCTGTACAAAG+CGG | 0.578974 | 6_1:+83709530 | Msa0895620:CDS |
| GAGGCCTTCGTGTCGAGGGG+TGG | 0.584779 | 6_1:-83709478 | None:intergenic |
| AGAAATCATTAGGAAGTCGC+TGG | 0.602316 | 6_1:+83708584 | Msa0895620:CDS |
| CAAAGGTTCTGTACAAAGCG+GGG | 0.603623 | 6_1:+83709532 | Msa0895620:CDS |
| TGTGGACAGAAGCCTTGAAG+CGG | 0.613077 | 6_1:+83708608 | Msa0895620:CDS |
| ATGGCATCATCTCTAGGAGA+AGG | 0.615001 | 6_1:-83702608 | None:intergenic |
| ATATGGTACCTTTAAAAGCA+CGG | 0.617291 | 6_1:-83702640 | None:intergenic |
| ATACAAAGCAACATATTCTG+AGG | 0.622438 | 6_1:+83708285 | Msa0895620:CDS |
| AATTGCTCAGAAGGATGCAA+AGG | 0.623988 | 6_1:+83709515 | Msa0895620:CDS |
| GTCATGATAATACGAACTGA+CGG | 0.635703 | 6_1:-83709628 | None:intergenic |
| TTTCTGCATCACGTGCTGCA+GGG | 0.638169 | 6_1:-83708566 | None:intergenic |
| ACGCGAACATATTACTTCCG+TGG | 0.638767 | 6_1:-83708631 | None:intergenic |
| GCATCATCTCTAGGAGAAGG+AGG | 0.640486 | 6_1:-83702605 | None:intergenic |
| CCCTCGACACGAAGGCCTCG+AGG | 0.644373 | 6_1:+83709482 | Msa0895620:CDS |
| AATTGAATTAAACACATCTG+GGG | 0.666935 | 6_1:+83708722 | Msa0895620:CDS |
| CAATTTCTCTATTAACCTCG+AGG | 0.673114 | 6_1:-83709497 | None:intergenic |
| TGAAACATCAGGCAACTACA+GGG | 0.675131 | 6_1:+83710238 | Msa0895620:CDS |
| AAAGGTTCTGTACAAAGCGG+GGG | 0.683235 | 6_1:+83709533 | Msa0895620:CDS |
| TCATAAGGGTCATTGTAACA+AGG | 0.683484 | 6_1:+83710138 | Msa0895620:CDS |
| TTAACCACCCCTCGACACGA+AGG | 0.686957 | 6_1:+83709474 | Msa0895620:CDS |
| CAGTAAAGAATGAAGCATCG+GGG | 0.745639 | 6_1:+83709756 | Msa0895620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGATTAAGAAAATAAA+AGG | + | chr6_1:83704548-83704567 | Msa0895620:intron | 10.0% |
| !! | ATTTGATTAAGAAAATAAAA+GGG | + | chr6_1:83704549-83704568 | Msa0895620:intron | 10.0% |
| !!! | TTTTAAAATGATTTTTTAAC+AGG | + | chr6_1:83707276-83707295 | Msa0895620:intron | 10.0% |
| !!! | TTTAAAATGATTTTTTAACA+GGG | + | chr6_1:83707277-83707296 | Msa0895620:intron | 10.0% |
| !! | TTAAATAATAAGTGTATGTT+TGG | - | chr6_1:83703850-83703869 | None:intergenic | 15.0% |
| !!! | TTTTATTTTAGTTGAATTGA+AGG | + | chr6_1:83704315-83704334 | Msa0895620:intron | 15.0% |
| !!! | AAAAATGTTTTTGTTTTTGT+TGG | + | chr6_1:83704397-83704416 | Msa0895620:intron | 15.0% |
| !!! | TTGATTTTAAGTTTGAAAAT+GGG | + | chr6_1:83704420-83704439 | Msa0895620:intron | 15.0% |
| !! | TATGAAACATAAAATGAAAA+TGG | + | chr6_1:83704960-83704979 | Msa0895620:intron | 15.0% |
| !! | ATGAAACATAAAATGAAAAT+GGG | + | chr6_1:83704961-83704980 | Msa0895620:intron | 15.0% |
| !! | TTAACAAAAAAAGTGATAAA+AGG | + | chr6_1:83705067-83705086 | Msa0895620:intron | 15.0% |
| !!! | AAATGATTTTTGTGATTTTT+TGG | + | chr6_1:83706906-83706925 | Msa0895620:intron | 15.0% |
| !! | ATTGAATTAGAAAAGTAAAT+TGG | + | chr6_1:83707142-83707161 | Msa0895620:intron | 15.0% |
| !!! | TTAAAATGATTTTTTAACAG+GGG | + | chr6_1:83707278-83707297 | Msa0895620:intron | 15.0% |
| !!! | ACAATTTTTAGAATTTAAAC+AGG | + | chr6_1:83707343-83707362 | Msa0895620:intron | 15.0% |
| !!! | CAATTTTTAGAATTTAAACA+GGG | + | chr6_1:83707344-83707363 | Msa0895620:intron | 15.0% |
| !!! | AGAATTAAACAAGTATTTTT+AGG | + | chr6_1:83707787-83707806 | Msa0895620:intron | 15.0% |
| !! | AAAAAAAATAAATGGTTCAA+TGG | - | chr6_1:83708162-83708181 | None:intergenic | 15.0% |
| !! | GTACTAATTTACTTATATAA+TGG | + | chr6_1:83708352-83708371 | Msa0895620:intron | 15.0% |
| !! | CTATAATTAACTGATATTTA+AGG | + | chr6_1:83709158-83709177 | Msa0895620:intron | 15.0% |
| !! | TATAATGAGTGTTTAAAAAA+CGG | + | chr6_1:83709219-83709238 | Msa0895620:intron | 15.0% |
| !!! | GAAACAAAGATAGTTTTAAA+AGG | - | chr6_1:83702485-83702504 | None:intergenic | 20.0% |
| !! | AGAAAGAATACGAAAAAATA+TGG | + | chr6_1:83702559-83702578 | Msa0895620:exon | 20.0% |
| !! | CACAACTTATTAGAAAAATA+TGG | - | chr6_1:83702660-83702679 | None:intergenic | 20.0% |
| !! | GTCAATATTCATAAATCATA+AGG | - | chr6_1:83702717-83702736 | None:intergenic | 20.0% |
| !! | TTTGACTATAAGTAAATTGA+AGG | + | chr6_1:83703224-83703243 | Msa0895620:intron | 20.0% |
| !! | TTGACTATAAGTAAATTGAA+GGG | + | chr6_1:83703225-83703244 | Msa0895620:intron | 20.0% |
| !!! | AAAGTAAATTGATTTCTGTT+TGG | - | chr6_1:83703894-83703913 | None:intergenic | 20.0% |
| !!! | CCAATTTTACGAAATTAATT+AGG | - | chr6_1:83703992-83704011 | None:intergenic | 20.0% |
| !! | CCTAATTAATTTCGTAAAAT+TGG | + | chr6_1:83703989-83704008 | Msa0895620:intron | 20.0% |
| !! | AAGAAAAAATAAGATATCAC+CGG | - | chr6_1:83704080-83704099 | None:intergenic | 20.0% |
| !!! | GTGATATCTTATTTTTTCTT+GGG | + | chr6_1:83704080-83704099 | Msa0895620:intron | 20.0% |
| !!! | GTTGATTTTAAGTTTGAAAA+TGG | + | chr6_1:83704419-83704438 | Msa0895620:intron | 20.0% |
| !! | AAAATAAAAGGGAAATTCAA+TGG | + | chr6_1:83704560-83704579 | Msa0895620:intron | 20.0% |
| !! | AAATAAAAGGGAAATTCAAT+GGG | + | chr6_1:83704561-83704580 | Msa0895620:intron | 20.0% |
| !!! | TCATTTTCATAATAAACCTT+GGG | - | chr6_1:83704595-83704614 | None:intergenic | 20.0% |
| !!! | ATCATTTTCATAATAAACCT+TGG | - | chr6_1:83704596-83704615 | None:intergenic | 20.0% |
| !!! | TGTTCATATTTTTGGAAAAT+TGG | + | chr6_1:83704628-83704647 | Msa0895620:intron | 20.0% |
| !!! | ATTAAGTTGCAAGAAAATAA+AGG | + | chr6_1:83704898-83704917 | Msa0895620:intron | 20.0% |
| !!! | TTAAGTTGCAAGAAAATAAA+GGG | + | chr6_1:83704899-83704918 | Msa0895620:intron | 20.0% |
| !!! | CTTGAAAATCGTATAATTTT+TGG | - | chr6_1:83705210-83705229 | None:intergenic | 20.0% |
| !! | TTTCACAAAATTCTTCAAAA+AGG | + | chr6_1:83705411-83705430 | Msa0895620:intron | 20.0% |
| !!! | TTCTTGTTTAAAAATTGTCT+AGG | - | chr6_1:83705553-83705572 | None:intergenic | 20.0% |
| !! | TTAACACAAATGCATTAATA+AGG | + | chr6_1:83705585-83705604 | Msa0895620:intron | 20.0% |
| !! | TAAATCTTGATCAAAATATG+TGG | - | chr6_1:83705624-83705643 | None:intergenic | 20.0% |
| !!! | AAAAACAAAAGTGCATTTTT+TGG | + | chr6_1:83705692-83705711 | Msa0895620:intron | 20.0% |
| !!! | ATCCTTTTTTAAGTTTGTTA+TGG | - | chr6_1:83707071-83707090 | None:intergenic | 20.0% |
| !!! | ATTGAAAGAGATTTTATCAT+GGG | + | chr6_1:83707515-83707534 | Msa0895620:intron | 20.0% |
| !! | TTTGCAAAATTCACATAAAA+GGG | - | chr6_1:83707692-83707711 | None:intergenic | 20.0% |
| !! | ATTTGCAAAATTCACATAAA+AGG | - | chr6_1:83707693-83707712 | None:intergenic | 20.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | + | chr6_1:83707800-83707819 | Msa0895620:intron | 20.0% |
| !! | AATAGTAGTTATAAAGTTAG+GGG | - | chr6_1:83708018-83708037 | None:intergenic | 20.0% |
| !! | GAATAGTAGTTATAAAGTTA+GGG | - | chr6_1:83708019-83708038 | None:intergenic | 20.0% |
| !! | TGAATAGTAGTTATAAAGTT+AGG | - | chr6_1:83708020-83708039 | None:intergenic | 20.0% |
| !!! | ATTTGTAATGATTTTGGTAT+AGG | - | chr6_1:83708043-83708062 | None:intergenic | 20.0% |
| !! | ATACCAAAATCATTACAAAT+TGG | + | chr6_1:83708043-83708062 | Msa0895620:intron | 20.0% |
| !! | ATAAACAATGAAACATTACA+CGG | - | chr6_1:83708498-83708517 | None:intergenic | 20.0% |
| !! | AAATTGAATTAAACACATCT+GGG | + | chr6_1:83708721-83708740 | Msa0895620:CDS | 20.0% |
| !!! | ACTGATATGTTACATTATTT+TGG | + | chr6_1:83708968-83708987 | Msa0895620:intron | 20.0% |
| !!! | ATTTTTTGTAAAGGTAGTTT+TGG | - | chr6_1:83709080-83709099 | None:intergenic | 20.0% |
| !! | ATCAGTTAATTATAGCAATT+TGG | - | chr6_1:83709153-83709172 | None:intergenic | 20.0% |
| !! | TTTCATACTGAATTAATATC+AGG | + | chr6_1:83709733-83709752 | Msa0895620:intron | 20.0% |
| !!! | AATATACAAATTTTGCGTAA+TGG | - | chr6_1:83710051-83710070 | None:intergenic | 20.0% |
| ! | TATGCTATGTCACTAAATAA+AGG | - | chr6_1:83702804-83702823 | None:intergenic | 25.0% |
| !!! | GCTTATGACATTTTTTCATA+AGG | + | chr6_1:83702860-83702879 | Msa0895620:intron | 25.0% |
| !!! | TTCTTTAAGATAGCTATGTA+AGG | + | chr6_1:83702906-83702925 | Msa0895620:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | + | chr6_1:83703056-83703075 | Msa0895620:intron | 25.0% |
| !! | AAGTCAATTCTAATTTCTAG+TGG | - | chr6_1:83703135-83703154 | None:intergenic | 25.0% |
| !!! | ATTAGAATTGACTTTTAGTC+TGG | + | chr6_1:83703141-83703160 | Msa0895620:intron | 25.0% |
| ! | TTCTCATAATAGCTTATGTA+AGG | + | chr6_1:83703368-83703387 | Msa0895620:intron | 25.0% |
| ! | ATGGAATCAAACATATACTA+GGG | - | chr6_1:83703466-83703485 | None:intergenic | 25.0% |
| ! | AATGGAATCAAACATATACT+AGG | - | chr6_1:83703467-83703486 | None:intergenic | 25.0% |
| !! | GTATATGTTTGATTCCATTT+TGG | + | chr6_1:83703468-83703487 | Msa0895620:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | + | chr6_1:83703056-83703075 | Msa0895620:intron | 25.0% |
| ! | CAAAATCAATTAACACATCT+GGG | - | chr6_1:83703670-83703689 | None:intergenic | 25.0% |
| ! | TCAAAATCAATTAACACATC+TGG | - | chr6_1:83703671-83703690 | None:intergenic | 25.0% |
| ! | TGCATAAGTATCAATTATAG+AGG | + | chr6_1:83703737-83703756 | Msa0895620:intron | 25.0% |
| ! | TTTCGTAAAATTGGATTGTA+AGG | + | chr6_1:83703998-83704017 | Msa0895620:intron | 25.0% |
| !!! | GGTGATATCTTATTTTTTCT+TGG | + | chr6_1:83704079-83704098 | Msa0895620:intron | 25.0% |
| !!! | TATCTTATTTTTTCTTGGGA+AGG | + | chr6_1:83704084-83704103 | Msa0895620:intron | 25.0% |
| !!! | ATCTTATTTTTTCTTGGGAA+GGG | + | chr6_1:83704085-83704104 | Msa0895620:intron | 25.0% |
| ! | TTCTTCATTTAGCAAACTTT+AGG | - | chr6_1:83704269-83704288 | None:intergenic | 25.0% |
| !!! | AAGTTTGCTAAATGAAGAAT+TGG | + | chr6_1:83704270-83704289 | Msa0895620:intron | 25.0% |
| ! | AATAAAAGGGAAATTCAATG+GGG | + | chr6_1:83704562-83704581 | Msa0895620:intron | 25.0% |
| !! | CATTTTCATAATAAACCTTG+GGG | - | chr6_1:83704594-83704613 | None:intergenic | 25.0% |
| !!! | GTGAAGTTTGTTCATATTTT+TGG | + | chr6_1:83704620-83704639 | Msa0895620:intron | 25.0% |
| ! | GTATGTTTAGATGTATGTTT+AGG | - | chr6_1:83704672-83704691 | None:intergenic | 25.0% |
| !!! | CTTTCATGCTTTTAATTTCT+TGG | - | chr6_1:83704832-83704851 | None:intergenic | 25.0% |
| ! | AAGTTAGAATGTAAACACTT+AGG | - | chr6_1:83704870-83704889 | None:intergenic | 25.0% |
| ! | AAGTGTTTACATTCTAACTT+TGG | + | chr6_1:83704870-83704889 | Msa0895620:intron | 25.0% |
| ! | AAGGGAAAAAGAAAATAAGA+AGG | + | chr6_1:83704917-83704936 | Msa0895620:intron | 25.0% |
| !! | TCATTTTGCTTCTATATCAT+TGG | - | chr6_1:83704996-83705015 | None:intergenic | 25.0% |
| ! | TCTTAATATTGTGAGAATCT+AGG | - | chr6_1:83705130-83705149 | None:intergenic | 25.0% |
| ! | AATAAATTTGCCTCTTAATG+TGG | - | chr6_1:83705323-83705342 | None:intergenic | 25.0% |
| !! | CATTTAGACATGTAATTTTG+TGG | - | chr6_1:83705346-83705365 | None:intergenic | 25.0% |
| ! | AACTTTATACCAAAATCTCA+AGG | + | chr6_1:83705370-83705389 | Msa0895620:intron | 25.0% |
| !!! | ACTTTTTCTTGTAGTAATCT+TGG | - | chr6_1:83705521-83705540 | None:intergenic | 25.0% |
| ! | AAATTACACAAAAGGCAATA+TGG | + | chr6_1:83705812-83705831 | Msa0895620:intron | 25.0% |
| ! | AATTACACAAAAGGCAATAT+GGG | + | chr6_1:83705813-83705832 | Msa0895620:intron | 25.0% |
| ! | AGAAGAAGTTTGAAAATGTT+GGG | - | chr6_1:83705949-83705968 | None:intergenic | 25.0% |
| ! | CAATAACAACAATACTAGAA+CGG | - | chr6_1:83706441-83706460 | None:intergenic | 25.0% |
| ! | TCAAAGAACAAGAAAGAAAT+AGG | - | chr6_1:83706544-83706563 | None:intergenic | 25.0% |
| ! | TGAATATTGAAGGTAGTTAA+AGG | + | chr6_1:83706784-83706803 | Msa0895620:intron | 25.0% |
| ! | ACTTATCCAAACTATTTGAA+AGG | + | chr6_1:83707471-83707490 | Msa0895620:intron | 25.0% |
| !! | GATTGAAAGAGATTTTATCA+TGG | + | chr6_1:83707514-83707533 | Msa0895620:intron | 25.0% |
| !!! | CATTCAACTCATTTTAATCT+TGG | - | chr6_1:83707651-83707670 | None:intergenic | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | + | chr6_1:83707799-83707818 | Msa0895620:intron | 25.0% |
| !! | GTTCCAATTTGTAATGATTT+TGG | - | chr6_1:83708049-83708068 | None:intergenic | 25.0% |
| !! | TTATAATTTTGTGCTTTCAC+AGG | + | chr6_1:83708184-83708203 | Msa0895620:intron | 25.0% |
| !!! | CTGTTTTAGATATTGTAGTT+GGG | - | chr6_1:83708664-83708683 | None:intergenic | 25.0% |
| !!! | ACTGTTTTAGATATTGTAGT+TGG | - | chr6_1:83708665-83708684 | None:intergenic | 25.0% |
| ! | GAAATTGAATTAAACACATC+TGG | + | chr6_1:83708720-83708739 | Msa0895620:CDS | 25.0% |
| ! | AATTGAATTAAACACATCTG+GGG | + | chr6_1:83708722-83708741 | Msa0895620:CDS | 25.0% |
| !!! | ATTGTTTTATGATCCCTATA+GGG | - | chr6_1:83708813-83708832 | None:intergenic | 25.0% |
| !!! | AATTGTTTTATGATCCCTAT+AGG | - | chr6_1:83708814-83708833 | None:intergenic | 25.0% |
| ! | ATCACAAATTAGTCACATTA+AGG | + | chr6_1:83708893-83708912 | Msa0895620:intron | 25.0% |
| ! | TCACAAATTAGTCACATTAA+GGG | + | chr6_1:83708894-83708913 | Msa0895620:intron | 25.0% |
| ! | GAACTATGAAAAATCCTAAA+AGG | - | chr6_1:83708924-83708943 | None:intergenic | 25.0% |
| ! | TGTAACATATCAGTTTGATT+TGG | - | chr6_1:83708962-83708981 | None:intergenic | 25.0% |
| !!! | ACGGTTTAGATTTTTTGTAA+AGG | - | chr6_1:83709089-83709108 | None:intergenic | 25.0% |
| !!! | ATTTGAGTTGAATCAGTTTT+TGG | - | chr6_1:83709200-83709219 | None:intergenic | 25.0% |
| !!! | ACAGTATGATTTTTTCATAG+CGG | + | chr6_1:83709264-83709283 | Msa0895620:intron | 25.0% |
| ! | CTTTCTAGATTCAAAATGTT+AGG | + | chr6_1:83709385-83709404 | Msa0895620:intron | 25.0% |
| !!! | AACAAGTTTTTTGCATAAAG+CGG | - | chr6_1:83709436-83709455 | None:intergenic | 25.0% |
| ! | TTAGGAAAAATACTTCCTTT+AGG | + | chr6_1:83709870-83709889 | Msa0895620:intron | 25.0% |
| ! | TAGGAAAAATACTTCCTTTA+GGG | + | chr6_1:83709871-83709890 | Msa0895620:intron | 25.0% |
| ! | ATATGGTACCTTTAAAAGCA+CGG | - | chr6_1:83702643-83702662 | None:intergenic | 30.0% |
| !!! | AACTTGTTTTAGACCATGTT+TGG | + | chr6_1:83702765-83702784 | Msa0895620:intron | 30.0% |
| CAAATAAGTCAATCCAAACA+TGG | - | chr6_1:83702781-83702800 | None:intergenic | 30.0% | |
| GTATATGTTTGATTCCACTT+TGG | + | chr6_1:83703006-83703025 | Msa0895620:intron | 30.0% | |
| ATTGAAGGGAAAACAATTTG+TGG | + | chr6_1:83703239-83703258 | Msa0895620:intron | 30.0% | |
| ! | CAGCAATTTAGCTTATGATT+TGG | + | chr6_1:83703326-83703345 | Msa0895620:intron | 30.0% |
| TGGAATCAAACATATACTAG+GGG | - | chr6_1:83703465-83703484 | None:intergenic | 30.0% | |
| ! | TATGTTTGATTCCATTTTGG+AGG | + | chr6_1:83703471-83703490 | Msa0895620:intron | 30.0% |
| ! | CATTTTGTATTCCTCCAAAA+TGG | - | chr6_1:83703485-83703504 | None:intergenic | 30.0% |
| GGAATACAAAATGATTCTAG+AGG | + | chr6_1:83703492-83703511 | Msa0895620:intron | 30.0% | |
| !! | TCTAGAATTGACTTTTAGTC+TGG | - | chr6_1:83703595-83703614 | None:intergenic | 30.0% |
| AGACTAAAAGTCAATTCTAG+AGG | + | chr6_1:83703594-83703613 | Msa0895620:intron | 30.0% | |
| TGATACTTATGCATAAAGCT+AGG | - | chr6_1:83703730-83703749 | None:intergenic | 30.0% | |
| !! | AACACGTCTAGAATCAATTT+TGG | + | chr6_1:83703807-83703826 | Msa0895620:intron | 30.0% |
| !! | ATTGTAAGGCTGTTTTATCT+TGG | + | chr6_1:83704012-83704031 | Msa0895620:intron | 30.0% |
| !! | GCTGTTTTATCTTGGTTTTT+CGG | + | chr6_1:83704020-83704039 | Msa0895620:intron | 30.0% |
| !! | CTGTTTTATCTTGGTTTTTC+GGG | + | chr6_1:83704021-83704040 | Msa0895620:intron | 30.0% |
| ! | TACGTTTGAACCTTTTAAAC+CGG | + | chr6_1:83704058-83704077 | Msa0895620:intron | 30.0% |
| !! | TAAGATATCACCGGTTTAAA+AGG | - | chr6_1:83704071-83704090 | None:intergenic | 30.0% |
| TAGGATACTATAGTCGTTAT+GGG | - | chr6_1:83704179-83704198 | None:intergenic | 30.0% | |
| ATAGGATACTATAGTCGTTA+TGG | - | chr6_1:83704180-83704199 | None:intergenic | 30.0% | |
| TAACGACTATAGTATCCTAT+AGG | + | chr6_1:83704180-83704199 | Msa0895620:intron | 30.0% | |
| TTTGCTAAATGAAGAATTGG+AGG | + | chr6_1:83704273-83704292 | Msa0895620:intron | 30.0% | |
| TTGCTAAATGAAGAATTGGA+GGG | + | chr6_1:83704274-83704293 | Msa0895620:intron | 30.0% | |
| !! | ACATTTTTGAGAGAGAACTA+CGG | - | chr6_1:83704385-83704404 | None:intergenic | 30.0% |
| ATGAGATCTTAGAAAAGAGT+GGG | + | chr6_1:83704473-83704492 | Msa0895620:intron | 30.0% | |
| ! | AAACATGCATATTCTAGCTA+TGG | + | chr6_1:83704710-83704729 | Msa0895620:intron | 30.0% |
| ! | GTATCTAGGGTATAATGTAA+AGG | - | chr6_1:83704792-83704811 | None:intergenic | 30.0% |
| TATACCCTAGATACATTCTA+TGG | + | chr6_1:83704798-83704817 | Msa0895620:intron | 30.0% | |
| !!! | CTTTTAATTTCTTGGCAAAG+AGG | - | chr6_1:83704824-83704843 | None:intergenic | 30.0% |
| GAAAATAAGAAGGAGATGAA+AGG | + | chr6_1:83704927-83704946 | Msa0895620:intron | 30.0% | |
| ! | ATTTCAAGTGATTCATTCCA+AGG | + | chr6_1:83705151-83705170 | Msa0895620:intron | 30.0% |
| ! | TTTCAAGTGATTCATTCCAA+GGG | + | chr6_1:83705152-83705171 | Msa0895620:intron | 30.0% |
| CACATTATTTACCAAACACA+AGG | + | chr6_1:83705263-83705282 | Msa0895620:intron | 30.0% | |
| ! | TGTGAATTCTTGATGACTAT+TGG | - | chr6_1:83705661-83705680 | None:intergenic | 30.0% |
| TAGCGTTAAAATTATATGCG+TGG | + | chr6_1:83705722-83705741 | Msa0895620:intron | 30.0% | |
| AGCGTTAAAATTATATGCGT+GGG | + | chr6_1:83705723-83705742 | Msa0895620:intron | 30.0% | |
| CTGCAAAGAAATTACACAAA+AGG | + | chr6_1:83705804-83705823 | Msa0895620:intron | 30.0% | |
| GAAGAAGTTTGAAAATGTTG+GGG | - | chr6_1:83705948-83705967 | None:intergenic | 30.0% | |
| GAGAAGAAGTTTGAAAATGT+TGG | - | chr6_1:83705950-83705969 | None:intergenic | 30.0% | |
| GTAGAGTAGTTTCGAAAATA+TGG | - | chr6_1:83706018-83706037 | None:intergenic | 30.0% | |
| ! | ACCATACACATACAGTTTTA+CGG | + | chr6_1:83706073-83706092 | Msa0895620:intron | 30.0% |
| AGTTAAAATTGGAGGAACAA+TGG | + | chr6_1:83706141-83706160 | Msa0895620:intron | 30.0% | |
| GTTAAAATTGGAGGAACAAT+GGG | + | chr6_1:83706142-83706161 | Msa0895620:intron | 30.0% | |
| ATTCATTCTCAACCAAATTC+AGG | - | chr6_1:83706476-83706495 | None:intergenic | 30.0% | |
| AAAGAAATAGGAAAGAGGAA+CGG | - | chr6_1:83706532-83706551 | None:intergenic | 30.0% | |
| ACAAGAAAGAAATAGGAAAG+AGG | - | chr6_1:83706537-83706556 | None:intergenic | 30.0% | |
| TGTTCTTTGACGAATTCAAT+TGG | + | chr6_1:83706554-83706573 | Msa0895620:intron | 30.0% | |
| GACGAATTCAATTGGAATTT+AGG | + | chr6_1:83706562-83706581 | Msa0895620:intron | 30.0% | |
| AGATGATGATTACGTGATTT+CGG | + | chr6_1:83706604-83706623 | Msa0895620:intron | 30.0% | |
| TGAATTCGATGATGAATTTC+AGG | + | chr6_1:83706630-83706649 | Msa0895620:intron | 30.0% | |
| !! | ATTTGTTGTGGATTGAATGT+TGG | + | chr6_1:83706675-83706694 | Msa0895620:intron | 30.0% |
| !! | TGAATGTTGGTGATGAATAT+TGG | + | chr6_1:83706688-83706707 | Msa0895620:intron | 30.0% |
| !! | AAGTTGTTGTTGTGATTTTG+TGG | + | chr6_1:83706720-83706739 | Msa0895620:intron | 30.0% |
| TGGTTAAGGATGAATATTGA+AGG | + | chr6_1:83706774-83706793 | Msa0895620:intron | 30.0% | |
| TTCTCACATCACCTATAAAT+GGG | - | chr6_1:83706978-83706997 | None:intergenic | 30.0% | |
| ATTCTCACATCACCTATAAA+TGG | - | chr6_1:83706979-83706998 | None:intergenic | 30.0% | |
| GGCCATAACAAACTTAAAAA+AGG | + | chr6_1:83707066-83707085 | Msa0895620:intron | 30.0% | |
| ! | ATGCAAATAACAAAAGTACG+AGG | + | chr6_1:83707095-83707114 | Msa0895620:intron | 30.0% |
| ! | TGCAAATAACAAAAGTACGA+GGG | + | chr6_1:83707096-83707115 | Msa0895620:intron | 30.0% |
| TCTGACATAGAATTGAAATG+AGG | + | chr6_1:83707448-83707467 | Msa0895620:intron | 30.0% | |
| TTGAGTCCTTTCAAATAGTT+TGG | - | chr6_1:83707480-83707499 | None:intergenic | 30.0% | |
| ! | GATTAAAATGAGTTGAATGC+AGG | + | chr6_1:83707652-83707671 | Msa0895620:intron | 30.0% |
| !! | CCTTTGTTATACCCTAATTT+TGG | - | chr6_1:83707814-83707833 | None:intergenic | 30.0% |
| CCAAAATTAGGGTATAACAA+AGG | + | chr6_1:83707811-83707830 | Msa0895620:intron | 30.0% | |
| GAGTTTATCATAGACTATCT+GGG | - | chr6_1:83707936-83707955 | None:intergenic | 30.0% | |
| AGAGTTTATCATAGACTATC+TGG | - | chr6_1:83707937-83707956 | None:intergenic | 30.0% | |
| !!! | CAGTTTTGTTAGATCAAGTT+TGG | - | chr6_1:83707976-83707995 | None:intergenic | 30.0% |
| AAAACTGAATTCAGATGTGA+GGG | + | chr6_1:83707989-83708008 | Msa0895620:intron | 30.0% | |
| AGTGTATTGTGATATCTGAA+TGG | + | chr6_1:83708102-83708121 | Msa0895620:intron | 30.0% | |
| !! | ATGTTGCTTTGTATTCTTGT+TGG | - | chr6_1:83708279-83708298 | None:intergenic | 30.0% |
| ATACAAAGCAACATATTCTG+AGG | + | chr6_1:83708285-83708304 | Msa0895620:CDS | 30.0% | |
| TTTAGATATTGTAGTTGGGA+TGG | - | chr6_1:83708660-83708679 | None:intergenic | 30.0% | |
| CAGTTATACCATTCAAAGTT+TGG | + | chr6_1:83708681-83708700 | Msa0895620:CDS | 30.0% | |
| AACTTCATGCTCAACATAAA+CGG | - | chr6_1:83708781-83708800 | None:intergenic | 30.0% | |
| AAGTTGAATGAAATCCCTAT+AGG | + | chr6_1:83708796-83708815 | Msa0895620:intron | 30.0% | |
| AGTTGAATGAAATCCCTATA+GGG | + | chr6_1:83708797-83708816 | Msa0895620:intron | 30.0% | |
| AATTTGTGATGTGATAGCTA+TGG | - | chr6_1:83708883-83708902 | None:intergenic | 30.0% | |
| CTATGAAAAATCCTAAAAGG+AGG | - | chr6_1:83708921-83708940 | None:intergenic | 30.0% | |
| ! | GATTTTTCATAGTTCGATTC+AGG | + | chr6_1:83708929-83708948 | Msa0895620:intron | 30.0% |
| AAACTGAACTGCATTGTTTA+CGG | + | chr6_1:83708993-83709012 | Msa0895620:intron | 30.0% | |
| !! | AACTTGTTAAGATCTTGCTT+AGG | + | chr6_1:83709448-83709467 | Msa0895620:intron | 30.0% |
| TAATAGAGAAATTGCTCAGA+AGG | + | chr6_1:83709506-83709525 | Msa0895620:CDS | 30.0% | |
| ! | TTGGACAAATGTCTTTTCAT+CGG | - | chr6_1:83709574-83709593 | None:intergenic | 30.0% |
| TCGTATTATCATGACATGTA+TGG | + | chr6_1:83709636-83709655 | Msa0895620:CDS | 30.0% | |
| TTCATCTTCACTTCAACTTT+AGG | + | chr6_1:83709852-83709871 | Msa0895620:intron | 30.0% | |
| AGGAAAAATACTTCCTTTAG+GGG | + | chr6_1:83709872-83709891 | Msa0895620:intron | 30.0% | |
| TATAAGGCAATGAAAGGTTT+AGG | + | chr6_1:83710098-83710117 | Msa0895620:intron | 30.0% | |
| ATAAGGCAATGAAAGGTTTA+GGG | + | chr6_1:83710099-83710118 | Msa0895620:intron | 30.0% | |
| TAATGATAGCACACTCATAA+GGG | + | chr6_1:83710124-83710143 | Msa0895620:CDS | 30.0% | |
| ! | CAACTTTACCGTGCTTTTAA+AGG | + | chr6_1:83702632-83702651 | Msa0895620:CDS | 35.0% |
| TATGTTTGATTCCACTTTGG+AGG | + | chr6_1:83703009-83703028 | Msa0895620:intron | 35.0% | |
| GGAATCAAAAGTGATTCTAG+AGG | + | chr6_1:83703030-83703049 | Msa0895620:intron | 35.0% | |
| AAGGGAAAACAATTTGTGGT+TGG | + | chr6_1:83703243-83703262 | Msa0895620:intron | 35.0% | |
| !!! | AATTTTGGCTCATCCAAAAG+TGG | + | chr6_1:83703822-83703841 | Msa0895620:intron | 35.0% |
| !! | TGTATGTTTGGTTCCACTTT+TGG | - | chr6_1:83703838-83703857 | None:intergenic | 35.0% |
| AAGTTAAAGACGGTTCCTAT+AGG | - | chr6_1:83704198-83704217 | None:intergenic | 35.0% | |
| GGGATTTGAAGAATAGAAAG+AGG | + | chr6_1:83704440-83704459 | Msa0895620:intron | 35.0% | |
| CATGAGATCTTAGAAAAGAG+TGG | + | chr6_1:83704472-83704491 | Msa0895620:intron | 35.0% | |
| TGAGATCTTAGAAAAGAGTG+GGG | + | chr6_1:83704474-83704493 | Msa0895620:intron | 35.0% | |
| GCATGTTTAGATGTATGCTT+AGG | - | chr6_1:83704698-83704717 | None:intergenic | 35.0% | |
| GGGTATAATGTAAAGGACAA+TGG | - | chr6_1:83704785-83704804 | None:intergenic | 35.0% | |
| GGAACAAATATGAGAACCAA+GGG | + | chr6_1:83705173-83705192 | Msa0895620:intron | 35.0% | |
| TTTGGCATGATAATTTCCCT+TGG | - | chr6_1:83705192-83705211 | None:intergenic | 35.0% | |
| !!! | CTGTTTTGGTTTAGTTCTTG+AGG | - | chr6_1:83705290-83705309 | None:intergenic | 35.0% |
| ! | TGATGTTGACCTTGAGATTT+TGG | - | chr6_1:83705382-83705401 | None:intergenic | 35.0% |
| !!! | TAAACCTATCTTTTGGGATG+TGG | - | chr6_1:83705493-83705512 | None:intergenic | 35.0% |
| TCCCAAAAGATAGGTTTACA+TGG | + | chr6_1:83705495-83705514 | Msa0895620:intron | 35.0% | |
| ! | GCCATGTAAACCTATCTTTT+GGG | - | chr6_1:83705499-83705518 | None:intergenic | 35.0% |
| GCGTTAAAATTATATGCGTG+GGG | + | chr6_1:83705724-83705743 | Msa0895620:intron | 35.0% | |
| CGTTAAAATTATATGCGTGG+GGG | + | chr6_1:83705725-83705744 | Msa0895620:intron | 35.0% | |
| AACAAAAGCAGCAGATACAA+GGG | + | chr6_1:83705765-83705784 | Msa0895620:intron | 35.0% | |
| !!! | TGTGTTTTAGGAGGAAGAAA+GGG | - | chr6_1:83705900-83705919 | None:intergenic | 35.0% |
| AAAATGTTGGGGAGAAAAGA+GGG | - | chr6_1:83705937-83705956 | None:intergenic | 35.0% | |
| !!! | TGTTCCTCCAATTTTAACTC+AGG | - | chr6_1:83706140-83706159 | None:intergenic | 35.0% |
| !! | ATTGGAATTTAGGCGTTGAT+CGG | + | chr6_1:83706572-83706591 | Msa0895620:intron | 35.0% |
| TGAATTTCAGGAACAGTGAT+AGG | + | chr6_1:83706642-83706661 | Msa0895620:intron | 35.0% | |
| !! | GGTTGATGATGAATTTGTTG+TGG | + | chr6_1:83706663-83706682 | Msa0895620:intron | 35.0% |
| !! | ATGTTGGTGATGAATATTGG+TGG | + | chr6_1:83706691-83706710 | Msa0895620:intron | 35.0% |
| ! | GTGATGAATATTGGTGGTTA+TGG | + | chr6_1:83706697-83706716 | Msa0895620:intron | 35.0% |
| !! | TTGTTGTTGTGATTTTGTGG+TGG | + | chr6_1:83706723-83706742 | Msa0895620:intron | 35.0% |
| AAGGTAGTTAAAGGTTGTTG+TGG | + | chr6_1:83706793-83706812 | Msa0895620:intron | 35.0% | |
| AGAGAAAGTTGTTAGAAGAG+AGG | + | chr6_1:83706861-83706880 | Msa0895620:intron | 35.0% | |
| GAGAAAGTTGTTAGAAGAGA+GGG | + | chr6_1:83706862-83706881 | Msa0895620:intron | 35.0% | |
| ! | ACCTTGACTTACTTTGACTT+TGG | + | chr6_1:83707045-83707064 | Msa0895620:intron | 35.0% |
| AAATGACTAAAATGCCCCTA+GGG | + | chr6_1:83707538-83707557 | Msa0895620:intron | 35.0% | |
| TTTGACATGAGATTGAGACA+AGG | + | chr6_1:83707607-83707626 | Msa0895620:intron | 35.0% | |
| TGAATAATGGTTAGAAGCGA+CGG | - | chr6_1:83707847-83707866 | None:intergenic | 35.0% | |
| AAGGAAGGTGATCTGAATAA+TGG | - | chr6_1:83707860-83707879 | None:intergenic | 35.0% | |
| CAAAACTGAATTCAGATGTG+AGG | + | chr6_1:83707988-83708007 | Msa0895620:intron | 35.0% | |
| ! | TTTTGTGCTTTCACAGGATT+TGG | + | chr6_1:83708190-83708209 | Msa0895620:intron | 35.0% |
| TTTGTGCTTTCACAGGATTT+GGG | + | chr6_1:83708191-83708210 | Msa0895620:intron | 35.0% | |
| TTTGTATTCTTGTTGGAGGT+AGG | - | chr6_1:83708272-83708291 | None:intergenic | 35.0% | |
| TTGCTTTGTATTCTTGTTGG+AGG | - | chr6_1:83708276-83708295 | None:intergenic | 35.0% | |
| GATAAACGCCAAACTTTGAA+TGG | - | chr6_1:83708692-83708711 | None:intergenic | 35.0% | |
| ! | TGTTCTTGAGTGTGGATTTT+AGG | + | chr6_1:83708848-83708867 | Msa0895620:intron | 35.0% |
| TTTCATAGTTCGATTCAGGA+AGG | + | chr6_1:83708933-83708952 | Msa0895620:intron | 35.0% | |
| !!! | AAGGTAGTTTTGGTACTGTT+CGG | - | chr6_1:83709070-83709089 | None:intergenic | 35.0% |
| ! | TTTTTCATAGCGGTTCAGTT+TGG | + | chr6_1:83709274-83709293 | Msa0895620:intron | 35.0% |
| ! | CTAAAAGCATGCGCTATTAT+TGG | - | chr6_1:83709343-83709362 | None:intergenic | 35.0% |
| AAAATGTTAGGATCTCGCTT+AGG | + | chr6_1:83709397-83709416 | Msa0895620:intron | 35.0% | |
| CAATTTCTCTATTAACCTCG+AGG | - | chr6_1:83709500-83709519 | None:intergenic | 35.0% | |
| TGCTTCGTTCACTGAATATT+TGG | - | chr6_1:83709593-83709612 | None:intergenic | 35.0% | |
| GTCATGATAATACGAACTGA+CGG | - | chr6_1:83709631-83709650 | None:intergenic | 35.0% | |
| !! | TCCAGCAAAGTATTTTGCAA+AGG | + | chr6_1:83709823-83709842 | Msa0895620:intron | 35.0% |
| ACCTTTGCAAAATACTTTGC+TGG | - | chr6_1:83709827-83709846 | None:intergenic | 35.0% | |
| GGAAAAATACTTCCTTTAGG+GGG | + | chr6_1:83709873-83709892 | Msa0895620:intron | 35.0% | |
| ! | GAAAAATACTTCCTTTAGGG+GGG | + | chr6_1:83709874-83709893 | Msa0895620:intron | 35.0% |
| TATATAACCACATTTGCCTG+CGG | - | chr6_1:83709925-83709944 | None:intergenic | 35.0% | |
| GTTGTGTACGATCATAGATT+AGG | + | chr6_1:83709992-83710011 | Msa0895620:intron | 35.0% | |
| GGAAAGCTAAGACGTTTAAA+AGG | - | chr6_1:83710030-83710049 | None:intergenic | 35.0% | |
| GTGTTGTATAAGGCAATGAA+AGG | + | chr6_1:83710092-83710111 | Msa0895620:intron | 35.0% | |
| CTAATGATAGCACACTCATA+AGG | + | chr6_1:83710123-83710142 | Msa0895620:CDS | 35.0% | |
| TCATAAGGGTCATTGTAACA+AGG | + | chr6_1:83710138-83710157 | Msa0895620:CDS | 35.0% | |
| ! | GATTTTCTTCTCGCACTTTT+GGG | + | chr6_1:83710260-83710279 | Msa0895620:CDS | 35.0% |
| ! | AAAAGCACGGTAAAGTTGCA+TGG | - | chr6_1:83702630-83702649 | None:intergenic | 40.0% |
| TGTTTATCCAAACAGTCTGC+TGG | + | chr6_1:83702984-83703003 | Msa0895620:intron | 40.0% | |
| ACATATACCAGCAGACTGTT+TGG | - | chr6_1:83702994-83703013 | None:intergenic | 40.0% | |
| !! | CACTTTTGATTCCTCCAAAG+TGG | - | chr6_1:83703023-83703042 | None:intergenic | 40.0% |
| ! | TCTGGAATTGAGTATGTTCG+CGG | + | chr6_1:83703159-83703178 | Msa0895620:intron | 40.0% |
| GTATGTTCGCGGACAAAAAT+TGG | + | chr6_1:83703170-83703189 | Msa0895620:intron | 40.0% | |
| ACATATACTAGGGGACTGTT+TGG | - | chr6_1:83703456-83703475 | None:intergenic | 40.0% | |
| AGTCTGGAAGTGAGTATGTT+TGG | - | chr6_1:83703579-83703598 | None:intergenic | 40.0% | |
| GTGGATTTGATCCCTTAATC+GGG | - | chr6_1:83704363-83704382 | None:intergenic | 40.0% | |
| ! | GGTGGATTTGATCCCTTAAT+CGG | - | chr6_1:83704364-83704383 | None:intergenic | 40.0% |
| !! | TTTTTGAGAGAGAACTACGG+TGG | - | chr6_1:83704382-83704401 | None:intergenic | 40.0% |
| AAGAATAGAAAGAGGCCTCA+AGG | + | chr6_1:83704448-83704467 | Msa0895620:intron | 40.0% | |
| AGAATAGAAAGAGGCCTCAA+GGG | + | chr6_1:83704449-83704468 | Msa0895620:intron | 40.0% | |
| ! | CATGCATATTCTAGCTATGG+TGG | + | chr6_1:83704713-83704732 | Msa0895620:intron | 40.0% |
| GAGGCCATAGAATGTATCTA+GGG | - | chr6_1:83704805-83704824 | None:intergenic | 40.0% | |
| AGAGGCCATAGAATGTATCT+AGG | - | chr6_1:83704806-83704825 | None:intergenic | 40.0% | |
| AGAAGGAGATGAAAGGCTTA+TGG | + | chr6_1:83704934-83704953 | Msa0895620:intron | 40.0% | |
| GAAGCAAAATGACAAGTGCA+TGG | + | chr6_1:83705004-83705023 | Msa0895620:intron | 40.0% | |
| ! | CTAGGTCTTGAGTTTGCTTT+AGG | - | chr6_1:83705112-83705131 | None:intergenic | 40.0% |
| GGTTCTCATATTTGTTCCCT+TGG | - | chr6_1:83705171-83705190 | None:intergenic | 40.0% | |
| GGGAACAAATATGAGAACCA+AGG | + | chr6_1:83705172-83705191 | Msa0895620:intron | 40.0% | |
| CAAGCAAACACCACATTAAG+AGG | + | chr6_1:83705310-83705329 | Msa0895620:intron | 40.0% | |
| GACAAAAACACACACACTCT+TGG | + | chr6_1:83705448-83705467 | Msa0895620:intron | 40.0% | |
| ! | CACACTCTTGGAGTGAATTT+TGG | + | chr6_1:83705460-83705479 | Msa0895620:intron | 40.0% |
| GAAACCACATCCCAAAAGAT+AGG | + | chr6_1:83705486-83705505 | Msa0895620:intron | 40.0% | |
| ! | GGCCATGTAAACCTATCTTT+TGG | - | chr6_1:83705500-83705519 | None:intergenic | 40.0% |
| CAACAAAAGCAGCAGATACA+AGG | + | chr6_1:83705764-83705783 | Msa0895620:intron | 40.0% | |
| ACAAAAGCAGCAGATACAAG+GGG | + | chr6_1:83705766-83705785 | Msa0895620:intron | 40.0% | |
| TTCTTGACCCATAAACCCAT+GGG | - | chr6_1:83705867-83705886 | None:intergenic | 40.0% | |
| ATTCTTGACCCATAAACCCA+TGG | - | chr6_1:83705868-83705887 | None:intergenic | 40.0% | |
| ATGGGTTTATGGGTCAAGAA+TGG | + | chr6_1:83705867-83705886 | Msa0895620:intron | 40.0% | |
| !!! | GTGTGTTTTAGGAGGAAGAA+AGG | - | chr6_1:83705901-83705920 | None:intergenic | 40.0% |
| GAAAATGTTGGGGAGAAAAG+AGG | - | chr6_1:83705938-83705957 | None:intergenic | 40.0% | |
| !!! | CATGGCTGATTGTTTTGAGA+AGG | - | chr6_1:83705972-83705991 | None:intergenic | 40.0% |
| ! | CTTCATGTGTATGTGTTGGT+TGG | - | chr6_1:83705995-83706014 | None:intergenic | 40.0% |
| ATGGCTTCATGTGTATGTGT+TGG | - | chr6_1:83705999-83706018 | None:intergenic | 40.0% | |
| ACACGCATACCAGATAAACA+CGG | + | chr6_1:83706036-83706055 | Msa0895620:intron | 40.0% | |
| GCCGTAAAACTGTATGTGTA+TGG | - | chr6_1:83706077-83706096 | None:intergenic | 40.0% | |
| ! | TTTTACGGCAAGAATCCGAT+CGG | + | chr6_1:83706088-83706107 | Msa0895620:intron | 40.0% |
| GAACGCACCTGAGTTAAAAT+TGG | + | chr6_1:83706130-83706149 | Msa0895620:intron | 40.0% | |
| TTTCAGAACGTGATCAAGGA+AGG | - | chr6_1:83706222-83706241 | None:intergenic | 40.0% | |
| AAGCTTTCAGAACGTGATCA+AGG | - | chr6_1:83706226-83706245 | None:intergenic | 40.0% | |
| AAATCCAGATCGTGAAACAG+AGG | - | chr6_1:83706303-83706322 | None:intergenic | 40.0% | |
| AAGAAGTGAGAGTGGAAACA+GGG | - | chr6_1:83706365-83706384 | None:intergenic | 40.0% | |
| ! | CGATTTTACGACGACGATAA+CGG | - | chr6_1:83706418-83706437 | None:intergenic | 40.0% |
| GGTTCAACACAAGCAATCAA+CGG | - | chr6_1:83706511-83706530 | None:intergenic | 40.0% | |
| !!! | TGTGATTTTGTGGTGGATTG+TGG | + | chr6_1:83706730-83706749 | Msa0895620:intron | 40.0% |
| GTAGTTAAAGGTTGTTGTGG+TGG | + | chr6_1:83706796-83706815 | Msa0895620:intron | 40.0% | |
| TGGTGGAAAGAGTTAGTTAG+AGG | + | chr6_1:83706836-83706855 | Msa0895620:intron | 40.0% | |
| CTATAAATGGGTCCAAGTCA+AGG | - | chr6_1:83706966-83706985 | None:intergenic | 40.0% | |
| !! | CTTGACTTGGACCCATTTAT+AGG | + | chr6_1:83706964-83706983 | Msa0895620:intron | 40.0% |
| ATAGGTGATGTGAGAATGCT+TGG | + | chr6_1:83706982-83707001 | Msa0895620:intron | 40.0% | |
| GCCAAAGTCAAAGTAAGTCA+AGG | - | chr6_1:83707049-83707068 | None:intergenic | 40.0% | |
| !! | TTGAGTCGTTTTAGTCCCTA+GGG | - | chr6_1:83707240-83707259 | None:intergenic | 40.0% |
| !! | TTTGAGTCGTTTTAGTCCCT+AGG | - | chr6_1:83707241-83707260 | None:intergenic | 40.0% |
| AAAAGACTAAAACGCCCCTA+GGG | + | chr6_1:83707379-83707398 | Msa0895620:intron | 40.0% | |
| ! | ATAAGTCAGTTTTGCCCCTA+GGG | - | chr6_1:83707397-83707416 | None:intergenic | 40.0% |
| ! | TATAAGTCAGTTTTGCCCCT+AGG | - | chr6_1:83707398-83707417 | None:intergenic | 40.0% |
| GAAATGACTAAAATGCCCCT+AGG | + | chr6_1:83707537-83707556 | Msa0895620:intron | 40.0% | |
| AATGACTAAAATGCCCCTAG+GGG | + | chr6_1:83707539-83707558 | Msa0895620:intron | 40.0% | |
| TTTAGTCAGTATAGCCCCTA+GGG | - | chr6_1:83707556-83707575 | None:intergenic | 40.0% | |
| ! | TTTTAGTCAGTATAGCCCCT+AGG | - | chr6_1:83707557-83707576 | None:intergenic | 40.0% |
| ! | TATCTAGAGCGTGACTTAGA+TGG | + | chr6_1:83707895-83707914 | Msa0895620:intron | 40.0% |
| GCTTTCGAAACGCTTAGTTT+CGG | + | chr6_1:83708309-83708328 | Msa0895620:CDS | 40.0% | |
| GGAGCTGAAAGGAAAATTAG+AGG | + | chr6_1:83708330-83708349 | Msa0895620:CDS | 40.0% | |
| ATCAGACTGCAGTTCTACTT+TGG | + | chr6_1:83708535-83708554 | Msa0895620:intron | 40.0% | |
| CACGTGATGCAGAAATCATT+AGG | + | chr6_1:83708574-83708593 | Msa0895620:CDS | 40.0% | |
| AGAAATCATTAGGAAGTCGC+TGG | + | chr6_1:83708584-83708603 | Msa0895620:CDS | 40.0% | |
| !! | TCTCTTGTTGTTCTTGAGTG+TGG | + | chr6_1:83708840-83708859 | Msa0895620:intron | 40.0% |
| ! | ACATTAAGGGTCCTCCTTTT+AGG | + | chr6_1:83708907-83708926 | Msa0895620:intron | 40.0% |
| ATCTAAGCTTTACACCAGTC+TGG | - | chr6_1:83709030-83709049 | None:intergenic | 40.0% | |
| !! | GCTTAGATGCATTGCTTTTG+TGG | + | chr6_1:83709042-83709061 | Msa0895620:intron | 40.0% |
| CAGTTCAGTTCGAAAAGCTA+CGG | - | chr6_1:83709108-83709127 | None:intergenic | 40.0% | |
| AATTGCTCAGAAGGATGCAA+AGG | + | chr6_1:83709515-83709534 | Msa0895620:CDS | 40.0% | |
| TGCAAAGGTTCTGTACAAAG+CGG | + | chr6_1:83709530-83709549 | Msa0895620:CDS | 40.0% | |
| ! | GTATGGTCACTCTTTGAAGA+AGG | + | chr6_1:83709653-83709672 | Msa0895620:CDS | 40.0% |
| GGCAGTAAAGAATGAAGCAT+CGG | + | chr6_1:83709754-83709773 | Msa0895620:intron | 40.0% | |
| ! | GCAGTAAAGAATGAAGCATC+GGG | + | chr6_1:83709755-83709774 | Msa0895620:CDS | 40.0% |
| !! | CAGTAAAGAATGAAGCATCG+GGG | + | chr6_1:83709756-83709775 | Msa0895620:CDS | 40.0% |
| !! | AATGAAGCATCGGGGAATTT+CGG | + | chr6_1:83709764-83709783 | Msa0895620:CDS | 40.0% |
| CAACTCTGACACGTAAACAT+CGG | - | chr6_1:83709976-83709995 | None:intergenic | 40.0% | |
| CTTATACAACACCTGCATTG+AGG | - | chr6_1:83710084-83710103 | None:intergenic | 40.0% | |
| ! | CTCAATGCAGGTGTTGTATA+AGG | + | chr6_1:83710082-83710101 | Msa0895620:intron | 40.0% |
| TGAAACATCAGGCAACTACA+GGG | + | chr6_1:83710238-83710257 | Msa0895620:CDS | 40.0% | |
| ! | GGATTTTCTTCTCGCACTTT+TGG | + | chr6_1:83710259-83710278 | Msa0895620:CDS | 40.0% |
| ! | TCTCTAGGAGAAGGAGGAAT+TGG | - | chr6_1:83702602-83702621 | None:intergenic | 45.0% |
| ! | ATGGCATCATCTCTAGGAGA+AGG | - | chr6_1:83702611-83702630 | None:intergenic | 45.0% |
| AGTTGCATGGCATCATCTCT+AGG | - | chr6_1:83702617-83702636 | None:intergenic | 45.0% | |
| !! | TAGAATTGATTTTGCGCCGC+AGG | + | chr6_1:83703552-83703571 | Msa0895620:intron | 45.0% |
| AGTGAGTATGTTTGGTCCTG+CGG | - | chr6_1:83703571-83703590 | None:intergenic | 45.0% | |
| AGCAAAACCCTTGAGAATCG+AGG | + | chr6_1:83704116-83704135 | Msa0895620:intron | 45.0% | |
| TTGCCTACGTACCCGATTAA+GGG | + | chr6_1:83704349-83704368 | Msa0895620:intron | 45.0% | |
| ! | TCTAAGATCTCATGCCCTTG+AGG | - | chr6_1:83704466-83704485 | None:intergenic | 45.0% |
| GTTCTTGAGGACCTTGTGTT+TGG | - | chr6_1:83705277-83705296 | None:intergenic | 45.0% | |
| !!! | GTGGTGTTTGCTTGCTGTTT+TGG | - | chr6_1:83705304-83705323 | None:intergenic | 45.0% |
| CAAAAGCAGCAGATACAAGG+GGG | + | chr6_1:83705767-83705786 | Msa0895620:intron | 45.0% | |
| CAAAAGGCAATATGGGCCTA+AGG | + | chr6_1:83705820-83705839 | Msa0895620:intron | 45.0% | |
| GCAATATGGGCCTAAGGAAT+GGG | + | chr6_1:83705826-83705845 | Msa0895620:intron | 45.0% | |
| CAATATGGGCCTAAGGAATG+GGG | + | chr6_1:83705827-83705846 | Msa0895620:intron | 45.0% | |
| AATATGGGCCTAAGGAATGG+GGG | + | chr6_1:83705828-83705847 | Msa0895620:intron | 45.0% | |
| GGTTAGACCCATGGGTTTAT+GGG | + | chr6_1:83705857-83705876 | Msa0895620:intron | 45.0% | |
| !! | TGTGTATGTGTTGGTTGGCA+TGG | - | chr6_1:83705990-83706009 | None:intergenic | 45.0% |
| GTGTATGGTTCTTGTAAGCC+TGG | - | chr6_1:83706062-83706081 | None:intergenic | 45.0% | |
| CGCACCTGAGTTAAAATTGG+AGG | + | chr6_1:83706133-83706152 | Msa0895620:intron | 45.0% | |
| AAGGAACAGCAAGAACGAAG+AGG | - | chr6_1:83706203-83706222 | None:intergenic | 45.0% | |
| TCTGAAAGCTTCGTCGTTAC+CGG | + | chr6_1:83706235-83706254 | Msa0895620:intron | 45.0% | |
| AAGCTTCAAGTGGCGAATAG+CGG | - | chr6_1:83706267-83706286 | None:intergenic | 45.0% | |
| CTATTCGCCACTTGAAGCTT+CGG | + | chr6_1:83706267-83706286 | Msa0895620:intron | 45.0% | |
| ATCGTGAAACAGAGGTTCAC+CGG | - | chr6_1:83706295-83706314 | None:intergenic | 45.0% | |
| TGAACCTCTGTTTCACGATC+TGG | + | chr6_1:83706296-83706315 | Msa0895620:intron | 45.0% | |
| GAAGAAGTGAGAGTGGAAAC+AGG | - | chr6_1:83706366-83706385 | None:intergenic | 45.0% | |
| AAGCGAAGAAGAAGTGAGAG+TGG | - | chr6_1:83706373-83706392 | None:intergenic | 45.0% | |
| CTGCGTTTCAGTCCTGAATT+TGG | + | chr6_1:83706461-83706480 | Msa0895620:intron | 45.0% | |
| !!! | GATTTTGTGGTGGATTGTGG+TGG | + | chr6_1:83706733-83706752 | Msa0895620:intron | 45.0% |
| !!! | GGTGGTTTTGGTGATGAATG+TGG | + | chr6_1:83706751-83706770 | Msa0895620:intron | 45.0% |
| !!! | GGTTTTGGTGATGAATGTGG+TGG | + | chr6_1:83706754-83706773 | Msa0895620:intron | 45.0% |
| GGTGATGAATGTGGTGGTTA+AGG | + | chr6_1:83706760-83706779 | Msa0895620:intron | 45.0% | |
| AAGGTTGTTGTGGTGGTTGA+TGG | + | chr6_1:83706803-83706822 | Msa0895620:intron | 45.0% | |
| TGTGAACCTTGACCTTGACT+TGG | + | chr6_1:83706951-83706970 | Msa0895620:intron | 45.0% | |
| GAGAATGCTTGGACCAATGA+TGG | + | chr6_1:83706993-83707012 | Msa0895620:intron | 45.0% | |
| GTTACAAATCCAATGCCACG+TGG | - | chr6_1:83707023-83707042 | None:intergenic | 45.0% | |
| AAATGACCAAAACGCCCCTA+GGG | + | chr6_1:83707222-83707241 | Msa0895620:intron | 45.0% | |
| !! | TGAGTCGTTTTAGTCCCTAG+GGG | - | chr6_1:83707239-83707258 | None:intergenic | 45.0% |
| GAAAAGACTAAAACGCCCCT+AGG | + | chr6_1:83707378-83707397 | Msa0895620:intron | 45.0% | |
| AAAGACTAAAACGCCCCTAG+GGG | + | chr6_1:83707380-83707399 | Msa0895620:intron | 45.0% | |
| ! | TAAGTCAGTTTTGCCCCTAG+GGG | - | chr6_1:83707396-83707415 | None:intergenic | 45.0% |
| TTAGTCAGTATAGCCCCTAG+GGG | - | chr6_1:83707555-83707574 | None:intergenic | 45.0% | |
| GATATCCACTCTTAGGCGTA+AGG | - | chr6_1:83707879-83707898 | None:intergenic | 45.0% | |
| ! | CGCTCTAGATATCCACTCTT+AGG | - | chr6_1:83707886-83707905 | None:intergenic | 45.0% |
| ACGCGAACATATTACTTCCG+TGG | - | chr6_1:83708634-83708653 | None:intergenic | 45.0% | |
| CACATCTGGGGATCATCAAA+AGG | + | chr6_1:83708734-83708753 | Msa0895620:CDS | 45.0% | |
| GCAAAGGTTCTGTACAAAGC+GGG | + | chr6_1:83709531-83709550 | Msa0895620:CDS | 45.0% | |
| CAAAGGTTCTGTACAAAGCG+GGG | + | chr6_1:83709532-83709551 | Msa0895620:CDS | 45.0% | |
| AAAGGTTCTGTACAAAGCGG+GGG | + | chr6_1:83709533-83709552 | Msa0895620:CDS | 45.0% | |
| ! | TCACACTTTTGCCTCAATGC+AGG | + | chr6_1:83710070-83710089 | Msa0895620:intron | 45.0% |
| !! | GCAGTTCACTCTGAAACATC+AGG | + | chr6_1:83710227-83710246 | Msa0895620:CDS | 45.0% |
| CTGAAACATCAGGCAACTAC+AGG | + | chr6_1:83710237-83710256 | Msa0895620:CDS | 45.0% | |
| !! | TTATAATGAAAAAAAATAAA+TGG | - | chr6_1:83708170-83708189 | None:intergenic | 5.0% |
| CTAGGAGAAGGAGGAATTGG+AGG | - | chr6_1:83702599-83702618 | None:intergenic | 50.0% | |
| ! | GCATCATCTCTAGGAGAAGG+AGG | - | chr6_1:83702608-83702627 | None:intergenic | 50.0% |
| AACCCTTGAGAATCGAGGTC+CGG | + | chr6_1:83704121-83704140 | Msa0895620:intron | 50.0% | |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | + | chr6_1:83704139-83704158 | Msa0895620:intron | 50.0% |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | + | chr6_1:83704144-83704163 | Msa0895620:intron | 50.0% |
| !! | TTTCGCTACGGGAAGGTGTT+AGG | + | chr6_1:83704151-83704170 | Msa0895620:intron | 50.0% |
| GCGCGCGTAGAAGTTAAAGA+CGG | - | chr6_1:83704208-83704227 | None:intergenic | 50.0% | |
| CTTAATCGGGTACGTAGGCA+AGG | - | chr6_1:83704350-83704369 | None:intergenic | 50.0% | |
| CTTGCCTACGTACCCGATTA+AGG | + | chr6_1:83704348-83704367 | Msa0895620:intron | 50.0% | |
| GATCCCTTAATCGGGTACGT+AGG | - | chr6_1:83704355-83704374 | None:intergenic | 50.0% | |
| !! | TCAATGGGGTTTTGACCCCA+AGG | + | chr6_1:83704576-83704595 | Msa0895620:intron | 50.0% |
| GGCAATATGGGCCTAAGGAA+TGG | + | chr6_1:83705825-83705844 | Msa0895620:intron | 50.0% | |
| CGGTTAGACCCATGGGTTTA+TGG | + | chr6_1:83705856-83705875 | Msa0895620:intron | 50.0% | |
| CTTCCTCCTAAAACACACGC+AGG | + | chr6_1:83705903-83705922 | Msa0895620:intron | 50.0% | |
| ! | TCTGTGCCTGCGTGTGTTTT+AGG | - | chr6_1:83705912-83705931 | None:intergenic | 50.0% |
| CATACCAGATAAACACGGCC+AGG | + | chr6_1:83706041-83706060 | Msa0895620:intron | 50.0% | |
| TAAGCCTGGCCGTGTTTATC+TGG | - | chr6_1:83706048-83706067 | None:intergenic | 50.0% | |
| TCCGATCGGAATGCACATGA+AGG | + | chr6_1:83706102-83706121 | Msa0895620:intron | 50.0% | |
| CCCTTCATGTGCATTCCGAT+CGG | - | chr6_1:83706106-83706125 | None:intergenic | 50.0% | |
| CCGATCGGAATGCACATGAA+GGG | + | chr6_1:83706103-83706122 | Msa0895620:intron | 50.0% | |
| CGATCGGAATGCACATGAAG+GGG | + | chr6_1:83706104-83706123 | Msa0895620:intron | 50.0% | |
| ! | GAGGAACAATGGGCTTTCGA+CGG | + | chr6_1:83706152-83706171 | Msa0895620:intron | 50.0% |
| ! | AGGAACAATGGGCTTTCGAC+GGG | + | chr6_1:83706153-83706172 | Msa0895620:intron | 50.0% |
| TGGCGAATAGCGGCAATTTC+CGG | - | chr6_1:83706257-83706276 | None:intergenic | 50.0% | |
| ! | AGAACGGATTCGAAGCAAGG+AGG | - | chr6_1:83706341-83706360 | None:intergenic | 50.0% |
| AGAGTGGAAACAGGGCAGAA+CGG | - | chr6_1:83706357-83706376 | None:intergenic | 50.0% | |
| !!! | GTGGTGGATTGTGGTGGTTT+TGG | + | chr6_1:83706739-83706758 | Msa0895620:intron | 50.0% |
| !! | GTTGTTGTGGTGGTTGATGG+TGG | + | chr6_1:83706806-83706825 | Msa0895620:intron | 50.0% |
| !! | TGGTGGTTGATGGTGGTTGA+TGG | + | chr6_1:83706813-83706832 | Msa0895620:intron | 50.0% |
| !! | TGGTTGATGGTGGTTGATGG+TGG | + | chr6_1:83706816-83706835 | Msa0895620:intron | 50.0% |
| !! | TTGATGGTGGTTGATGGTGG+TGG | + | chr6_1:83706819-83706838 | Msa0895620:intron | 50.0% |
| ATGGGTCCAAGTCAAGGTCA+AGG | - | chr6_1:83706960-83706979 | None:intergenic | 50.0% | |
| GAAATGACCAAAACGCCCCT+AGG | + | chr6_1:83707221-83707240 | Msa0895620:intron | 50.0% | |
| !!! | TTTAGTCCCTAGGGGCGTTT+TGG | - | chr6_1:83707231-83707250 | None:intergenic | 50.0% |
| ACCTTCCTTACGCCTAAGAG+TGG | + | chr6_1:83707871-83707890 | Msa0895620:intron | 50.0% | |
| TCCACTCTTAGGCGTAAGGA+AGG | - | chr6_1:83707875-83707894 | None:intergenic | 50.0% | |
| CGCTTAGTTTCGGAGCTGAA+AGG | + | chr6_1:83708319-83708338 | Msa0895620:CDS | 50.0% | |
| TTTCTGCATCACGTGCTGCA+GGG | - | chr6_1:83708569-83708588 | None:intergenic | 50.0% | |
| ATTTCTGCATCACGTGCTGC+AGG | - | chr6_1:83708570-83708589 | None:intergenic | 50.0% | |
| ! | CATTAGGAAGTCGCTGGTTG+TGG | + | chr6_1:83708590-83708609 | Msa0895620:CDS | 50.0% |
| TGTGGACAGAAGCCTTGAAG+CGG | + | chr6_1:83708608-83708627 | Msa0895620:CDS | 50.0% | |
| GTTTGGCGTTTATCTCGAGC+AGG | + | chr6_1:83708698-83708717 | Msa0895620:CDS | 50.0% | |
| CTGGGGATCATCAAAAGGTG+AGG | + | chr6_1:83708739-83708758 | Msa0895620:intron | 50.0% | |
| GCTTTACACCAGTCTGGTCT+GGG | - | chr6_1:83709024-83709043 | None:intergenic | 50.0% | |
| AGCTTTACACCAGTCTGGTC+TGG | - | chr6_1:83709025-83709044 | None:intergenic | 50.0% | |
| AAAGCGGGGGAGAAGAAACT+GGG | + | chr6_1:83709546-83709565 | Msa0895620:CDS | 50.0% | |
| TGAACGAAGCAGTGCGCATT+TGG | + | chr6_1:83709602-83709621 | Msa0895620:CDS | 50.0% | |
| ACCCTTGAGAATCGAGGTCC+GGG | + | chr6_1:83704122-83704141 | Msa0895620:intron | 55.0% | |
| TCCCGGACCTCGATTCTCAA+GGG | - | chr6_1:83704126-83704145 | None:intergenic | 55.0% | |
| CCCGTAGCGAAAACAACTCC+CGG | - | chr6_1:83704143-83704162 | None:intergenic | 55.0% | |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | + | chr6_1:83704140-83704159 | Msa0895620:intron | 55.0% |
| GGTGGTGTGTGTGCATGTGT+CGG | + | chr6_1:83704731-83704750 | Msa0895620:intron | 55.0% | |
| ! | GCATGTGTCGGTGCTTGTGT+CGG | + | chr6_1:83704743-83704762 | Msa0895620:intron | 55.0% |
| !! | GTGCCTGCGTGTGTTTTAGG+AGG | - | chr6_1:83705909-83705928 | None:intergenic | 55.0% |
| GCCACTTGAAGCTTCGGTTC+CGG | + | chr6_1:83706273-83706292 | Msa0895620:intron | 55.0% | |
| ACCGGAACCGAAGCTTCAAG+TGG | - | chr6_1:83706277-83706296 | None:intergenic | 55.0% | |
| ! | GGCAGAACGGATTCGAAGCA+AGG | - | chr6_1:83706344-83706363 | None:intergenic | 55.0% |
| !! | ACCAATGATGGACTGCCACG+TGG | + | chr6_1:83707005-83707024 | Msa0895620:intron | 55.0% |
| TTACTTCCGTGGCCGCTTCA+AGG | - | chr6_1:83708623-83708642 | None:intergenic | 55.0% | |
| TTAACCACCCCTCGACACGA+AGG | + | chr6_1:83709474-83709493 | Msa0895620:CDS | 55.0% | |
| CAAAGCGGGGGAGAAGAAAC+TGG | + | chr6_1:83709545-83709564 | Msa0895620:CDS | 55.0% | |
| AAGCACAGACACCCCCCTAA+AGG | - | chr6_1:83709888-83709907 | None:intergenic | 55.0% | |
| TTCATAGCATGCGATGCCGC+AGG | + | chr6_1:83709906-83709925 | Msa0895620:intron | 55.0% | |
| CTCCCGGACCTCGATTCTCA+AGG | - | chr6_1:83704127-83704146 | None:intergenic | 60.0% | |
| ATGGGCCTAAGGAATGGGGG+TGG | + | chr6_1:83705831-83705850 | Msa0895620:intron | 60.0% | |
| TGGGCCTAAGGAATGGGGGT+GGG | + | chr6_1:83705832-83705851 | Msa0895620:intron | 60.0% | |
| CCTAAGGAATGGGGGTGGGT+CGG | + | chr6_1:83705836-83705855 | Msa0895620:intron | 60.0% | |
| GGTGGGTCGGTTAGACCCAT+GGG | + | chr6_1:83705849-83705868 | Msa0895620:intron | 60.0% | |
| GCCACGTGGCAGTCCATCAT+TGG | - | chr6_1:83707009-83707028 | None:intergenic | 60.0% | |
| !! | GATGGACTGCCACGTGGCAT+TGG | + | chr6_1:83707011-83707030 | Msa0895620:intron | 60.0% |
| CAGAAGCCTTGAAGCGGCCA+CGG | + | chr6_1:83708614-83708633 | Msa0895620:CDS | 60.0% | |
| TGCGATGCCGCAGGCAAATG+TGG | + | chr6_1:83709915-83709934 | Msa0895620:intron | 60.0% | |
| CCGACCCACCCCCATTCCTT+AGG | - | chr6_1:83705839-83705858 | None:intergenic | 65.0% | |
| GGGTGGGTCGGTTAGACCCA+TGG | + | chr6_1:83705848-83705867 | Msa0895620:intron | 65.0% | |
| GCATCACGTGCTGCAGGGTC+AGG | - | chr6_1:83708564-83708583 | None:intergenic | 65.0% | |
| CGGTACGTCCCAGACCAGAC+TGG | + | chr6_1:83709013-83709032 | Msa0895620:intron | 65.0% | |
| CTCGAGGCCTTCGTGTCGAG+GGG | - | chr6_1:83709484-83709503 | None:intergenic | 65.0% | |
| CCTCGAGGCCTTCGTGTCGA+GGG | - | chr6_1:83709485-83709504 | None:intergenic | 65.0% | |
| ACCTCGAGGCCTTCGTGTCG+AGG | - | chr6_1:83709486-83709505 | None:intergenic | 65.0% | |
| GAGGCCTTCGTGTCGAGGGG+TGG | - | chr6_1:83709481-83709500 | None:intergenic | 70.0% | |
| CCCTCGACACGAAGGCCTCG+AGG | + | chr6_1:83709482-83709501 | Msa0895620:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 83702440 | 83710292 | 83702440 | ID=Msa0895620;Name=Msa0895620 |
| chr6_1 | mRNA | 83702440 | 83710292 | 83702440 | ID=Msa0895620-mRNA-1;Parent=Msa0895620;Name=Msa0895620-mRNA-1;_AED=0.34;_eAED=0.34;_QI=138|0.8|0.66|1|0.8|0.66|6|0|286 |
| chr6_1 | exon | 83702440 | 83702653 | 83702440 | ID=Msa0895620-mRNA-1:exon:14146;Parent=Msa0895620-mRNA-1 |
| chr6_1 | exon | 83708206 | 83708351 | 83708206 | ID=Msa0895620-mRNA-1:exon:14147;Parent=Msa0895620-mRNA-1 |
| chr6_1 | exon | 83708540 | 83708755 | 83708540 | ID=Msa0895620-mRNA-1:exon:14148;Parent=Msa0895620-mRNA-1 |
| chr6_1 | exon | 83709459 | 83709674 | 83709459 | ID=Msa0895620-mRNA-1:exon:14149;Parent=Msa0895620-mRNA-1 |
| chr6_1 | exon | 83709755 | 83709785 | 83709755 | ID=Msa0895620-mRNA-1:exon:14150;Parent=Msa0895620-mRNA-1 |
| chr6_1 | exon | 83710120 | 83710292 | 83710120 | ID=Msa0895620-mRNA-1:exon:14151;Parent=Msa0895620-mRNA-1 |
| chr6_1 | five_prime_UTR | 83702440 | 83702577 | 83702440 | ID=Msa0895620-mRNA-1:five_prime_utr;Parent=Msa0895620-mRNA-1 |
| chr6_1 | CDS | 83702578 | 83702653 | 83702578 | ID=Msa0895620-mRNA-1:cds;Parent=Msa0895620-mRNA-1 |
| chr6_1 | CDS | 83708206 | 83708351 | 83708206 | ID=Msa0895620-mRNA-1:cds;Parent=Msa0895620-mRNA-1 |
| chr6_1 | CDS | 83708540 | 83708755 | 83708540 | ID=Msa0895620-mRNA-1:cds;Parent=Msa0895620-mRNA-1 |
| chr6_1 | CDS | 83709459 | 83709674 | 83709459 | ID=Msa0895620-mRNA-1:cds;Parent=Msa0895620-mRNA-1 |
| chr6_1 | CDS | 83709755 | 83709785 | 83709755 | ID=Msa0895620-mRNA-1:cds;Parent=Msa0895620-mRNA-1 |
| chr6_1 | CDS | 83710120 | 83710292 | 83710120 | ID=Msa0895620-mRNA-1:cds;Parent=Msa0895620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
