Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296240 | sp|Q8GUM4|Y3739_ARATH | 40.317 | 568 | 315 | 7 | 21 | 586 | 21 | 566 | 4.10e-138 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296240 | A0A396GTZ3 | 97.822 | 597 | 13 | 0 | 1 | 597 | 1 | 597 | 0.0 | 1196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009640 | Msa1296240 | 0.806954 | 6.399452e-50 | -8.615850e-47 |
| Msa0030700 | Msa1296240 | 0.803191 | 3.922473e-49 | -8.615850e-47 |
| Msa0043740 | Msa1296240 | 0.818506 | 1.892013e-52 | -8.615850e-47 |
| Msa0051960 | Msa1296240 | 0.823433 | 1.389083e-53 | -8.615850e-47 |
| Msa0061220 | Msa1296240 | 0.811337 | 7.363595e-51 | -8.615850e-47 |
| Msa0090090 | Msa1296240 | 0.826546 | 2.556245e-54 | -8.615850e-47 |
| Msa0090380 | Msa1296240 | 0.849278 | 3.581941e-60 | -8.615850e-47 |
| Msa0094710 | Msa1296240 | 0.855164 | 7.581856e-62 | -8.615850e-47 |
| Msa0095940 | Msa1296240 | 0.837842 | 4.093136e-57 | -8.615850e-47 |
| Msa0101960 | Msa1296240 | 0.830916 | 2.243122e-55 | -8.615850e-47 |
| Msa0615210 | Msa1296240 | 0.811771 | 5.926910e-51 | -8.615850e-47 |
| Msa0631130 | Msa1296240 | 0.828009 | 1.140730e-54 | -8.615850e-47 |
| Msa0635270 | Msa1296240 | 0.838109 | 3.495711e-57 | -8.615850e-47 |
| Msa0641130 | Msa1296240 | 0.846668 | 1.879166e-59 | -8.615850e-47 |
| Msa0654640 | Msa1296240 | 0.819454 | 1.151668e-52 | -8.615850e-47 |
| Msa0658190 | Msa1296240 | 0.807639 | 4.582021e-50 | -8.615850e-47 |
| Msa0669350 | Msa1296240 | 0.810034 | 1.408946e-50 | -8.615850e-47 |
| Msa0679670 | Msa1296240 | 0.811688 | 6.178643e-51 | -8.615850e-47 |
| Msa0696100 | Msa1296240 | 0.810627 | 1.049473e-50 | -8.615850e-47 |
| Msa0703030 | Msa1296240 | 0.806002 | 1.016363e-49 | -8.615850e-47 |
| Msa0709140 | Msa1296240 | 0.815648 | 8.299379e-52 | -8.615850e-47 |
| Msa0713060 | Msa1296240 | 0.803172 | 3.957624e-49 | -8.615850e-47 |
| Msa0744640 | Msa1296240 | 0.867287 | 1.529484e-65 | -8.615850e-47 |
| Msa0753930 | Msa1296240 | 0.826714 | 2.331126e-54 | -8.615850e-47 |
| Msa0758520 | Msa1296240 | 0.802488 | 5.478695e-49 | -8.615850e-47 |
| Msa0758570 | Msa1296240 | 0.809207 | 2.120413e-50 | -8.615850e-47 |
| Msa0787790 | Msa1296240 | 0.821370 | 4.186667e-53 | -8.615850e-47 |
| Msa0790920 | Msa1296240 | 0.849765 | 2.621145e-60 | -8.615850e-47 |
| Msa0804870 | Msa1296240 | 0.835527 | 1.592888e-56 | -8.615850e-47 |
| Msa0810440 | Msa1296240 | 0.815062 | 1.120588e-51 | -8.615850e-47 |
| Msa0832950 | Msa1296240 | 0.809583 | 1.760915e-50 | -8.615850e-47 |
| Msa0833270 | Msa1296240 | 0.849150 | 3.888813e-60 | -8.615850e-47 |
| Msa0838870 | Msa1296240 | 0.830733 | 2.486369e-55 | -8.615850e-47 |
| Msa0841730 | Msa1296240 | 0.868022 | 8.888438e-66 | -8.615850e-47 |
| Msa0137560 | Msa1296240 | 0.828251 | 9.975730e-55 | -8.615850e-47 |
| Msa0137860 | Msa1296240 | 0.848761 | 4.988536e-60 | -8.615850e-47 |
| Msa0139680 | Msa1296240 | 0.819428 | 1.167575e-52 | -8.615850e-47 |
| Msa0150620 | Msa1296240 | 0.805599 | 1.234759e-49 | -8.615850e-47 |
| Msa0171330 | Msa1296240 | 0.833492 | 5.170757e-56 | -8.615850e-47 |
| Msa0182560 | Msa1296240 | 0.807998 | 3.844122e-50 | -8.615850e-47 |
| Msa0186240 | Msa1296240 | 0.810073 | 1.381382e-50 | -8.615850e-47 |
| Msa0193190 | Msa1296240 | 0.836465 | 9.211084e-57 | -8.615850e-47 |
| Msa0204140 | Msa1296240 | 0.805440 | 1.333898e-49 | -8.615850e-47 |
| Msa0224130 | Msa1296240 | 0.826298 | 2.929179e-54 | -8.615850e-47 |
| Msa1225580 | Msa1296240 | 0.850417 | 1.721207e-60 | -8.615850e-47 |
| Msa1231710 | Msa1296240 | 0.802508 | 5.426627e-49 | -8.615850e-47 |
| Msa1237890 | Msa1296240 | 0.853788 | 1.895386e-61 | -8.615850e-47 |
| Msa1238600 | Msa1296240 | 0.840395 | 8.921599e-58 | -8.615850e-47 |
| Msa1246790 | Msa1296240 | 0.823987 | 1.030233e-53 | -8.615850e-47 |
| Msa1252810 | Msa1296240 | 0.809711 | 1.653456e-50 | -8.615850e-47 |
| Msa1255210 | Msa1296240 | 0.812829 | 3.482339e-51 | -8.615850e-47 |
| Msa1256060 | Msa1296240 | 0.892988 | 9.545849e-75 | -8.615850e-47 |
| Msa1259860 | Msa1296240 | 0.800981 | 1.116606e-48 | -8.615850e-47 |
| Msa1279060 | Msa1296240 | 0.806802 | 6.893032e-50 | -8.615850e-47 |
| Msa1295650 | Msa1296240 | 0.807458 | 5.006112e-50 | -8.615850e-47 |
| Msa1296240 | Msa1306830 | 0.811621 | 6.387146e-51 | -8.615850e-47 |
| Msa1296240 | Msa1307530 | 0.816465 | 5.453888e-52 | -8.615850e-47 |
| Msa1296240 | Msa1312440 | 0.828291 | 9.757071e-55 | -8.615850e-47 |
| Msa1296240 | Msa1318550 | 0.843982 | 1.002296e-58 | -8.615850e-47 |
| Msa1296240 | Msa1355510 | 0.853457 | 2.360128e-61 | -8.615850e-47 |
| Msa1296240 | Msa1362850 | 0.803345 | 3.643821e-49 | -8.615850e-47 |
| Msa1296240 | Msa1364080 | 0.831797 | 1.361680e-55 | -8.615850e-47 |
| Msa1296240 | Msa1367790 | 0.835659 | 1.475043e-56 | -8.615850e-47 |
| Msa1296240 | Msa1379020 | 0.813391 | 2.621399e-51 | -8.615850e-47 |
| Msa1296240 | Msa1389170 | 0.804151 | 2.478413e-49 | -8.615850e-47 |
| Msa1296240 | Msa1395110 | 0.819561 | 1.088650e-52 | -8.615850e-47 |
| Msa1296240 | Msa1395250 | 0.813864 | 2.062050e-51 | -8.615850e-47 |
| Msa1296240 | Msa1397390 | 0.808271 | 3.361205e-50 | -8.615850e-47 |
| Msa1296240 | Msa1398140 | 0.836426 | 9.425092e-57 | -8.615850e-47 |
| Msa1296240 | Msa1404050 | 0.833820 | 4.280914e-56 | -8.615850e-47 |
| Msa1296240 | Msa1407880 | 0.830163 | 3.428649e-55 | -8.615850e-47 |
| Msa1296240 | Msa1413800 | 0.810780 | 9.723180e-51 | -8.615850e-47 |
| Msa1296240 | Msa1415410 | 0.829263 | 5.677100e-55 | -8.615850e-47 |
| Msa1296240 | Msa1420940 | 0.814558 | 1.449476e-51 | -8.615850e-47 |
| Msa1296240 | Msa1433410 | 0.851510 | 8.466817e-61 | -8.615850e-47 |
| Msa1296240 | Msa1435320 | 0.831516 | 1.596601e-55 | -8.615850e-47 |
| Msa1296240 | Msa1436090 | 0.808914 | 2.451031e-50 | -8.615850e-47 |
| Msa1296240 | Msa1443400 | 0.834107 | 3.628681e-56 | -8.615850e-47 |
| Msa1296240 | Msa1443620 | 0.835995 | 1.212524e-56 | -8.615850e-47 |
| Msa1296240 | Msa1447870 | 0.809319 | 2.006407e-50 | -8.615850e-47 |
| Msa1296240 | Msa1447880 | 0.816613 | 5.052463e-52 | -8.615850e-47 |
| Msa1296240 | Msa1448040 | 0.834309 | 3.228651e-56 | -8.615850e-47 |
| Msa1296240 | Msa1451990 | 0.840565 | 8.055550e-58 | -8.615850e-47 |
| Msa1296240 | Msa1455200 | 0.825874 | 3.695568e-54 | -8.615850e-47 |
| Msa0374890 | Msa1296240 | 0.813301 | 2.742650e-51 | -8.615850e-47 |
| Msa0375070 | Msa1296240 | 0.804333 | 2.271309e-49 | -8.615850e-47 |
| Msa0383900 | Msa1296240 | 0.826973 | 2.021192e-54 | -8.615850e-47 |
| Msa0389900 | Msa1296240 | 0.803833 | 2.886578e-49 | -8.615850e-47 |
| Msa0393100 | Msa1296240 | 0.814209 | 1.731376e-51 | -8.615850e-47 |
| Msa0415640 | Msa1296240 | 0.824969 | 6.051965e-54 | -8.615850e-47 |
| Msa0434300 | Msa1296240 | 0.822512 | 2.276922e-53 | -8.615850e-47 |
| Msa0434400 | Msa1296240 | 0.825211 | 5.304957e-54 | -8.615850e-47 |
| Msa0460600 | Msa1296240 | 0.806247 | 9.026923e-50 | -8.615850e-47 |
| Msa0996380 | Msa1296240 | 0.811551 | 6.615132e-51 | -8.615850e-47 |
| Msa1001120 | Msa1296240 | 0.805711 | 1.169903e-49 | -8.615850e-47 |
| Msa1011250 | Msa1296240 | 0.853825 | 1.850121e-61 | -8.615850e-47 |
| Msa1016960 | Msa1296240 | 0.802578 | 5.248362e-49 | -8.615850e-47 |
| Msa1026890 | Msa1296240 | 0.802574 | 5.258188e-49 | -8.615850e-47 |
| Msa1030200 | Msa1296240 | 0.818907 | 1.533949e-52 | -8.615850e-47 |
| Msa1030210 | Msa1296240 | 0.816909 | 4.335710e-52 | -8.615850e-47 |
| Msa1030240 | Msa1296240 | 0.812748 | 3.626869e-51 | -8.615850e-47 |
| Msa1030810 | Msa1296240 | 0.808785 | 2.611119e-50 | -8.615850e-47 |
| Msa1058200 | Msa1296240 | 0.815690 | 8.124844e-52 | -8.615850e-47 |
| Msa1059670 | Msa1296240 | 0.806347 | 8.597771e-50 | -8.615850e-47 |
| Msa1069890 | Msa1296240 | 0.856077 | 4.104618e-62 | -8.615850e-47 |
| Msa1086490 | Msa1296240 | -0.817441 | 3.292573e-52 | -8.615850e-47 |
| Msa1089190 | Msa1296240 | 0.837420 | 5.254139e-57 | -8.615850e-47 |
| Msa1092310 | Msa1296240 | 0.800590 | 1.342299e-48 | -8.615850e-47 |
| Msa1102210 | Msa1296240 | 0.815043 | 1.131578e-51 | -8.615850e-47 |
| Msa0257760 | Msa1296240 | 0.807974 | 3.888300e-50 | -8.615850e-47 |
| Msa0257900 | Msa1296240 | 0.816097 | 6.592142e-52 | -8.615850e-47 |
| Msa0257910 | Msa1296240 | 0.818590 | 1.810622e-52 | -8.615850e-47 |
| Msa0264680 | Msa1296240 | 0.850386 | 1.756121e-60 | -8.615850e-47 |
| Msa0265270 | Msa1296240 | 0.825881 | 3.680072e-54 | -8.615850e-47 |
| Msa0273070 | Msa1296240 | 0.814154 | 1.780144e-51 | -8.615850e-47 |
| Msa0279660 | Msa1296240 | 0.806573 | 7.705343e-50 | -8.615850e-47 |
| Msa0296910 | Msa1296240 | 0.814919 | 1.205820e-51 | -8.615850e-47 |
| Msa0302730 | Msa1296240 | 0.848568 | 5.641143e-60 | -8.615850e-47 |
| Msa0306310 | Msa1296240 | 0.831875 | 1.302257e-55 | -8.615850e-47 |
| Msa0335070 | Msa1296240 | 0.811184 | 7.948778e-51 | -8.615850e-47 |
| Msa0335080 | Msa1296240 | 0.812234 | 4.698616e-51 | -8.615850e-47 |
| Msa0345050 | Msa1296240 | 0.809783 | 1.595167e-50 | -8.615850e-47 |
| Msa0345890 | Msa1296240 | 0.844775 | 6.134569e-59 | -8.615850e-47 |
| Msa0345980 | Msa1296240 | 0.807497 | 4.911787e-50 | -8.615850e-47 |
| Msa0355550 | Msa1296240 | 0.834959 | 2.216359e-56 | -8.615850e-47 |
| Msa1114670 | Msa1296240 | 0.813574 | 2.389607e-51 | -8.615850e-47 |
| Msa1119920 | Msa1296240 | 0.825957 | 3.529929e-54 | -8.615850e-47 |
| Msa1120580 | Msa1296240 | 0.815715 | 8.021629e-52 | -8.615850e-47 |
| Msa1128790 | Msa1296240 | 0.824342 | 8.501472e-54 | -8.615850e-47 |
| Msa1131790 | Msa1296240 | 0.814966 | 1.177170e-51 | -8.615850e-47 |
| Msa1133700 | Msa1296240 | 0.800001 | 1.768759e-48 | -8.615850e-47 |
| Msa1136760 | Msa1296240 | 0.840340 | 9.226346e-58 | -8.615850e-47 |
| Msa1150280 | Msa1296240 | 0.806983 | 6.311194e-50 | -8.615850e-47 |
| Msa1157110 | Msa1296240 | 0.825276 | 5.121059e-54 | -8.615850e-47 |
| Msa1157670 | Msa1296240 | 0.851964 | 6.297309e-61 | -8.615850e-47 |
| Msa1159170 | Msa1296240 | 0.828524 | 8.568512e-55 | -8.615850e-47 |
| Msa1171450 | Msa1296240 | 0.820899 | 5.374161e-53 | -8.615850e-47 |
| Msa1180430 | Msa1296240 | 0.802897 | 4.511122e-49 | -8.615850e-47 |
| Msa1187490 | Msa1296240 | 0.802183 | 6.332187e-49 | -8.615850e-47 |
| Msa1202800 | Msa1296240 | 0.811399 | 7.138320e-51 | -8.615850e-47 |
| Msa1203810 | Msa1296240 | 0.845879 | 3.082743e-59 | -8.615850e-47 |
| Msa1208990 | Msa1296240 | 0.854756 | 9.955048e-62 | -8.615850e-47 |
| Msa1218160 | Msa1296240 | 0.809146 | 2.185718e-50 | -8.615850e-47 |
| Msa0484800 | Msa1296240 | 0.811749 | 5.991997e-51 | -8.615850e-47 |
| Msa0488580 | Msa1296240 | 0.807407 | 5.130869e-50 | -8.615850e-47 |
| Msa0490320 | Msa1296240 | 0.823173 | 1.597209e-53 | -8.615850e-47 |
| Msa0497120 | Msa1296240 | 0.818155 | 2.271191e-52 | -8.615850e-47 |
| Msa0497690 | Msa1296240 | 0.814482 | 1.506410e-51 | -8.615850e-47 |
| Msa0517270 | Msa1296240 | 0.853130 | 2.928501e-61 | -8.615850e-47 |
| Msa0522140 | Msa1296240 | 0.812886 | 3.383147e-51 | -8.615850e-47 |
| Msa0522170 | Msa1296240 | 0.814592 | 1.424457e-51 | -8.615850e-47 |
| Msa0534610 | Msa1296240 | 0.824732 | 6.883486e-54 | -8.615850e-47 |
| Msa0545050 | Msa1296240 | 0.834817 | 2.407426e-56 | -8.615850e-47 |
| Msa0558390 | Msa1296240 | 0.807868 | 4.096633e-50 | -8.615850e-47 |
| Msa0561300 | Msa1296240 | 0.835596 | 1.530578e-56 | -8.615850e-47 |
| Msa0567370 | Msa1296240 | 0.816817 | 4.547957e-52 | -8.615850e-47 |
| Msa0567430 | Msa1296240 | 0.818354 | 2.048046e-52 | -8.615850e-47 |
| Msa0567480 | Msa1296240 | 0.820037 | 8.475006e-53 | -8.615850e-47 |
| Msa0567520 | Msa1296240 | 0.800554 | 1.364966e-48 | -8.615850e-47 |
| Msa0577490 | Msa1296240 | 0.810098 | 1.364566e-50 | -8.615850e-47 |
| Msa0584600 | Msa1296240 | 0.816332 | 5.840720e-52 | -8.615850e-47 |
| Msa0588710 | Msa1296240 | 0.803472 | 3.429354e-49 | -8.615850e-47 |
| Msa0590810 | Msa1296240 | 0.831459 | 1.649515e-55 | -8.615850e-47 |
| Msa0592650 | Msa1296240 | 0.810288 | 1.241670e-50 | -8.615850e-47 |
| Msa0592660 | Msa1296240 | 0.816895 | 4.367709e-52 | -8.615850e-47 |
| Msa0599220 | Msa1296240 | 0.806902 | 6.564025e-50 | -8.615850e-47 |
| Msa0600590 | Msa1296240 | 0.849619 | 2.879492e-60 | -8.615850e-47 |
| Msa0863990 | Msa1296240 | 0.866582 | 2.565687e-65 | -8.615850e-47 |
| Msa0870510 | Msa1296240 | 0.852269 | 5.158463e-61 | -8.615850e-47 |
| Msa0895620 | Msa1296240 | 0.826536 | 2.570048e-54 | -8.615850e-47 |
| Msa0901290 | Msa1296240 | 0.801119 | 1.046510e-48 | -8.615850e-47 |
| Msa0905570 | Msa1296240 | 0.826326 | 2.885099e-54 | -8.615850e-47 |
| Msa0922190 | Msa1296240 | 0.808202 | 3.477951e-50 | -8.615850e-47 |
| Msa0945130 | Msa1296240 | 0.834503 | 2.886652e-56 | -8.615850e-47 |
| Msa0966580 | Msa1296240 | 0.806784 | 6.952558e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296240 | MtrunA17_Chr8g0374991 | 97.822 | 597 | 13 | 0 | 1 | 597 | 1 | 597 | 0.0 | 1196 |
| Msa1296240 | MtrunA17_Chr3g0120631 | 41.971 | 548 | 304 | 8 | 11 | 554 | 12 | 549 | 5.92e-144 | 428 |
| Msa1296240 | MtrunA17_Chr7g0226361 | 38.241 | 557 | 313 | 10 | 15 | 561 | 13 | 548 | 4.51e-137 | 411 |
| Msa1296240 | MtrunA17_Chr6g0458321 | 39.286 | 560 | 320 | 9 | 5 | 560 | 21 | 564 | 8.19e-135 | 406 |
| Msa1296240 | MtrunA17_Chr3g0120571 | 49.338 | 302 | 148 | 4 | 11 | 310 | 12 | 310 | 7.97e-90 | 280 |
| Msa1296240 | MtrunA17_Chr3g0120581 | 36.923 | 195 | 119 | 2 | 360 | 554 | 5 | 195 | 1.20e-38 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296240 | AT4G37030.1 | 65.957 | 564 | 190 | 1 | 1 | 562 | 1 | 564 | 0.0 | 767 |
| Msa1296240 | AT4G12680.1 | 42.884 | 534 | 281 | 6 | 28 | 552 | 28 | 546 | 8.57e-147 | 436 |
| Msa1296240 | AT5G40640.1 | 42.366 | 524 | 284 | 6 | 21 | 542 | 21 | 528 | 2.82e-140 | 420 |
| Msa1296240 | AT3G27390.2 | 40.317 | 568 | 315 | 7 | 21 | 586 | 21 | 566 | 4.17e-139 | 417 |
| Msa1296240 | AT3G27390.1 | 40.317 | 568 | 315 | 7 | 21 | 586 | 21 | 566 | 4.17e-139 | 417 |
Find 141 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAACGTTGGGGTGATTT+TGG | 0.073856 | 8_3:-55295621 | Msa1296240:CDS |
| TAGAATCATTCTCAGGATTT+TGG | 0.180407 | 8_3:+55296109 | None:intergenic |
| GCTGCTTTGATACTGATTAT+AGG | 0.191136 | 8_3:-55295641 | Msa1296240:CDS |
| AGATGTTTCTGAAAAGATTT+TGG | 0.223952 | 8_3:-55291872 | Msa1296240:CDS |
| GACCATCTTCTTTCGATATT+GGG | 0.235654 | 8_3:+55293748 | None:intergenic |
| ATCCAATCTTCTAAAGAATT+AGG | 0.250425 | 8_3:+55295895 | None:intergenic |
| AGACCATCTTCTTTCGATAT+TGG | 0.271551 | 8_3:+55293747 | None:intergenic |
| TTCCTAATTCTTTAGAAGAT+TGG | 0.283009 | 8_3:-55295897 | Msa1296240:CDS |
| TGCCTCTATTATAGTATATC+AGG | 0.289735 | 8_3:-55294152 | Msa1296240:intron |
| GACAATTCAAGAAGTGAAAA+TGG | 0.309864 | 8_3:-55293606 | Msa1296240:CDS |
| TTTGGCATATGGTTGGGTTT+AGG | 0.310250 | 8_3:-55295415 | Msa1296240:CDS |
| AAATTAATTGTTACTTCAAA+AGG | 0.318285 | 8_3:+55295561 | None:intergenic |
| CGTAGTTCCTTCAAGTAACT+TGG | 0.327610 | 8_3:+55294961 | None:intergenic |
| AGGCAATCCAACACCAACTA+TGG | 0.328987 | 8_3:+55292736 | None:intergenic |
| TGCAGGTTAATTCATGTTCC+TGG | 0.330940 | 8_3:-55294424 | Msa1296240:intron |
| TGTAATGAAGAAAATGAATA+TGG | 0.331464 | 8_3:+55295965 | None:intergenic |
| AGCCATGATACTAGTAATAA+AGG | 0.337857 | 8_3:+55295924 | None:intergenic |
| AGCATTATTCACTCATTCAT+TGG | 0.338249 | 8_3:-55291941 | Msa1296240:CDS |
| GATAAGAGGCAAGGAATTAT+TGG | 0.352583 | 8_3:-55292825 | Msa1296240:CDS |
| TTGGTTCTTCAATCCTGTTA+TGG | 0.354393 | 8_3:-55292597 | Msa1296240:CDS |
| TGCCAGCTTTGTTTGGCATA+TGG | 0.354484 | 8_3:-55295426 | Msa1296240:CDS |
| AATATTGTCAAACCAGCAAT+TGG | 0.356494 | 8_3:+55294244 | None:intergenic |
| GAATGAATTGTTAGGATGAT+TGG | 0.364915 | 8_3:-55292024 | Msa1296240:intron |
| ATTGCTTTGCCAGCTTTGTT+TGG | 0.365895 | 8_3:-55295433 | Msa1296240:CDS |
| GGCTTTGGTTACACATTCTC+AGG | 0.376208 | 8_3:-55291899 | Msa1296240:CDS |
| AAGGCAGTTGTACTGTGGTT+AGG | 0.385783 | 8_3:-55295014 | Msa1296240:CDS |
| CAATCCAACAACTTGTCCTT+TGG | 0.390148 | 8_3:+55292617 | None:intergenic |
| TGTTTCCTGCACATGTGGCT+TGG | 0.393525 | 8_3:-55295595 | Msa1296240:CDS |
| GCTTTGTTTGGCATATGGTT+GGG | 0.393957 | 8_3:-55295421 | Msa1296240:CDS |
| GATCTTGAAGGAGCTAAGTT+TGG | 0.395219 | 8_3:+55293638 | None:intergenic |
| TGTACCAGCCCTTGAACAAT+AGG | 0.397217 | 8_3:+55294323 | None:intergenic |
| GTTCTTGTTGGTGTTGGGTA+TGG | 0.397301 | 8_3:-55295379 | Msa1296240:CDS |
| AAGCAGATCAAATACTACTA+TGG | 0.398252 | 8_3:-55293681 | Msa1296240:CDS |
| GGTAGTGTTCTTGTTGGTGT+TGG | 0.400483 | 8_3:-55295385 | Msa1296240:CDS |
| TGTTCCTTGAGAACCATAAC+AGG | 0.400936 | 8_3:+55292584 | None:intergenic |
| TACTGATTATAGGAAACGTT+GGG | 0.405547 | 8_3:-55295631 | Msa1296240:CDS |
| AAGATCTTTCCGTAGAGGTT+TGG | 0.407048 | 8_3:-55293935 | Msa1296240:CDS |
| ACAGTTTGTGTCCCAATTGC+TGG | 0.407213 | 8_3:-55294256 | Msa1296240:CDS |
| ATCCTTTATTACTAGTATCA+TGG | 0.407218 | 8_3:-55295926 | Msa1296240:exon |
| TCCTTGGATTTCAACTTTCG+AGG | 0.417570 | 8_3:-55295347 | Msa1296240:CDS |
| GTAGTGTTCTTGTTGGTGTT+GGG | 0.422524 | 8_3:-55295384 | Msa1296240:CDS |
| AGGTTGAAGACTTGGGATAA+TGG | 0.424290 | 8_3:-55292485 | Msa1296240:CDS |
| AAGTTTGGCATAAACATTGC+AGG | 0.426495 | 8_3:+55293653 | None:intergenic |
| ACAGATAAGGGTTATTAAGT+TGG | 0.427835 | 8_3:-55292564 | Msa1296240:CDS |
| GGTTCTCAAGGAACAGATAA+GGG | 0.430454 | 8_3:-55292576 | Msa1296240:CDS |
| AGCTTTGTTTGGCATATGGT+TGG | 0.433383 | 8_3:-55295422 | Msa1296240:CDS |
| AGGCAGTTGTACTGTGGTTA+GGG | 0.434898 | 8_3:-55295013 | Msa1296240:CDS |
| TTGATGAATATACGAATGAT+TGG | 0.435343 | 8_3:-55293885 | Msa1296240:CDS |
| TTCATATCCAAGTTACTTGA+AGG | 0.443666 | 8_3:-55294968 | Msa1296240:CDS |
| CAAAGGACAAGTTGTTGGAT+TGG | 0.449625 | 8_3:-55292616 | Msa1296240:CDS |
| TAGAGGTTTGGCTTATATAG+TGG | 0.454344 | 8_3:-55293923 | Msa1296240:CDS |
| CGAAACTTCCTTCTGTATGT+TGG | 0.456021 | 8_3:+55291976 | None:intergenic |
| GTCTCTCTAACTGATCTTGA+AGG | 0.459413 | 8_3:+55293626 | None:intergenic |
| ATCAGTATCAAAGCAGCAAT+AGG | 0.464848 | 8_3:+55295647 | None:intergenic |
| GTTCCTGGATGTGTGATTGT+AGG | 0.467610 | 8_3:-55294409 | Msa1296240:CDS |
| CAGACCAAAGGACAAGTTGT+TGG | 0.471091 | 8_3:-55292621 | Msa1296240:CDS |
| TTAACTCAGGATGGAACCTT+GGG | 0.472086 | 8_3:-55295045 | Msa1296240:intron |
| TTGGGACACAAACTGTTTCA+AGG | 0.474502 | 8_3:+55294263 | None:intergenic |
| AATTAATTGTTACTTCAAAA+GGG | 0.479275 | 8_3:+55295562 | None:intergenic |
| TGAGCAGCTCTAAGACCATC+AGG | 0.483015 | 8_3:+55292449 | None:intergenic |
| GATAAGGGTTATTAAGTTGG+TGG | 0.485743 | 8_3:-55292561 | Msa1296240:CDS |
| ACTATGTTAGAATCATTCTC+AGG | 0.491533 | 8_3:+55296102 | None:intergenic |
| TGGTTCTCAAGGAACAGATA+AGG | 0.493510 | 8_3:-55292577 | Msa1296240:CDS |
| ATAGCTGGTAGTGTTCTTGT+TGG | 0.494389 | 8_3:-55295391 | Msa1296240:CDS |
| AATTATGCAGGCTTTATTGT+GGG | 0.495246 | 8_3:-55295671 | Msa1296240:intron |
| ATGTGTGATTGTAGGGATAG+TGG | 0.496279 | 8_3:-55294401 | Msa1296240:CDS |
| TGGTTGGGTTTAGGTATAGC+TGG | 0.496915 | 8_3:-55295406 | Msa1296240:CDS |
| TCAAGTAACTTGGATATGAA+TGG | 0.499939 | 8_3:+55294971 | None:intergenic |
| CAGATCAGTGTAAGACACTA+AGG | 0.500384 | 8_3:-55294924 | Msa1296240:intron |
| GAGTCCATACCTATTGTTCA+AGG | 0.501729 | 8_3:-55294332 | Msa1296240:CDS |
| ACAGTCCAAGCCACATGTGC+AGG | 0.503615 | 8_3:+55295590 | None:intergenic |
| ATGAGGGACTGTGAGATAAG+AGG | 0.507519 | 8_3:-55292839 | Msa1296240:CDS |
| TTTAACTCAGGATGGAACCT+TGG | 0.509087 | 8_3:-55295046 | Msa1296240:intron |
| ACCATCTTCTTTCGATATTG+GGG | 0.510188 | 8_3:+55293749 | None:intergenic |
| ATAAACAAAGGTTGAAGACT+TGG | 0.510371 | 8_3:-55292493 | Msa1296240:CDS |
| CTTAGAGCTGCTCAAATTGA+GGG | 0.513791 | 8_3:-55292440 | Msa1296240:CDS |
| AACCATATGCCAAACAAAGC+TGG | 0.514652 | 8_3:+55295424 | None:intergenic |
| CAATCCTGTTATGGTTCTCA+AGG | 0.514824 | 8_3:-55292588 | Msa1296240:CDS |
| TATTTGGAGAAAGATCCTTC+TGG | 0.517933 | 8_3:-55291841 | Msa1296240:CDS |
| ATAGCAATTGCAGTGAATAG+AGG | 0.521061 | 8_3:+55294361 | None:intergenic |
| TCTTAGAGCTGCTCAAATTG+AGG | 0.521338 | 8_3:-55292441 | Msa1296240:CDS |
| GAAATTCTTGCACTGTATTG+TGG | 0.522001 | 8_3:-55295299 | Msa1296240:intron |
| TTCCTGGATGTGTGATTGTA+GGG | 0.525274 | 8_3:-55294408 | Msa1296240:CDS |
| CAGCAATACACCACTTGAGT+TGG | 0.526106 | 8_3:+55292673 | None:intergenic |
| AACCTGATATACTATAATAG+AGG | 0.530458 | 8_3:+55294150 | None:intergenic |
| AAATTATGCAGGCTTTATTG+TGG | 0.530901 | 8_3:-55295672 | Msa1296240:intron |
| AGGGTTATTAAGTTGGTGGA+AGG | 0.531476 | 8_3:-55292557 | Msa1296240:CDS |
| CATGATTTAATCAGCAGAGA+AGG | 0.534133 | 8_3:-55294292 | Msa1296240:CDS |
| ATCCCTACAATCACACATCC+AGG | 0.534696 | 8_3:+55294406 | None:intergenic |
| ACACAAACTGTTTCAAGGAA+TGG | 0.536385 | 8_3:+55294268 | None:intergenic |
| GAAGCATCCATAGTTGGTGT+TGG | 0.536429 | 8_3:-55292743 | Msa1296240:CDS |
| TTTGGCTTATATAGTGGCAA+TGG | 0.537383 | 8_3:-55293917 | Msa1296240:CDS |
| CTATATAAGCCAAACCTCTA+CGG | 0.539558 | 8_3:+55293926 | None:intergenic |
| TCAAGAAGTGAAAATGGTGC+AGG | 0.541464 | 8_3:-55293600 | Msa1296240:intron |
| GACAACAGCCAATAAAATGC+TGG | 0.542522 | 8_3:+55294198 | None:intergenic |
| TGTGTGATTGTAGGGATAGT+GGG | 0.546317 | 8_3:-55294400 | Msa1296240:CDS |
| TAAACAAAGGTTGAAGACTT+GGG | 0.547144 | 8_3:-55292492 | Msa1296240:CDS |
| CAGCCCTTGAACAATAGGTA+TGG | 0.553845 | 8_3:+55294328 | None:intergenic |
| GGGATTGTTTCCTGCACATG+TGG | 0.554102 | 8_3:-55295600 | Msa1296240:CDS |
| GTTAACGAAGCATCCATAGT+TGG | 0.554261 | 8_3:-55292749 | Msa1296240:CDS |
| ATATTGTCAAACCAGCAATT+GGG | 0.563293 | 8_3:+55294245 | None:intergenic |
| ATACTGATTATAGGAAACGT+TGG | 0.566056 | 8_3:-55295632 | Msa1296240:CDS |
| CATACCTATTGTTCAAGGGC+TGG | 0.568654 | 8_3:-55294327 | Msa1296240:CDS |
| GGAAGGTGAAGTGAGATACT+TGG | 0.570542 | 8_3:-55292540 | Msa1296240:CDS |
| GCCCCAATATCGAAAGAAGA+TGG | 0.573372 | 8_3:-55293750 | Msa1296240:CDS |
| TCGATCAAAGCCAACTCAAG+TGG | 0.573931 | 8_3:-55292683 | Msa1296240:CDS |
| TGACTCATTATCATATCTGA+AGG | 0.575441 | 8_3:+55295324 | None:intergenic |
| GGTAGCTTATTGATTCCTGA+TGG | 0.575995 | 8_3:-55292464 | Msa1296240:CDS |
| CTTCTGGTAGATCAAGTACA+AGG | 0.577363 | 8_3:-55291825 | Msa1296240:CDS |
| AGGATGATTGGAATGATAAG+AGG | 0.577930 | 8_3:-55292012 | Msa1296240:CDS |
| AAAACAAGAAGGAATATTGG+TGG | 0.579194 | 8_3:+55296024 | None:intergenic |
| ACTGCCTTTGATAGTTCCCA+AGG | 0.580385 | 8_3:+55295029 | None:intergenic |
| CTGGTTTGACAATATTTGTG+TGG | 0.580754 | 8_3:-55294237 | Msa1296240:CDS |
| TATTGGTGGCGTGTGTTGCA+AGG | 0.581208 | 8_3:+55296038 | None:intergenic |
| GGAACCTTGGGAACTATCAA+AGG | 0.586981 | 8_3:-55295033 | Msa1296240:CDS |
| GCCTCGAAAGTTGAAATCCA+AGG | 0.596159 | 8_3:+55295346 | None:intergenic |
| TAGGAAAGATCTTTCCGTAG+AGG | 0.600407 | 8_3:-55293940 | Msa1296240:CDS |
| CAAAGCTTCCAACATACAGA+AGG | 0.602294 | 8_3:-55291984 | Msa1296240:CDS |
| ATGCTGGCAATGACAACAAG+AGG | 0.604569 | 8_3:+55294214 | None:intergenic |
| TTTCTACTCGAGGAAACAGT+GGG | 0.608465 | 8_3:-55293709 | Msa1296240:CDS |
| GATTGGCTCTATCTTAGAGA+GGG | 0.610416 | 8_3:-55293868 | Msa1296240:CDS |
| AATGTATTGCGACAGATATG+GGG | 0.611258 | 8_3:-55292869 | Msa1296240:intron |
| CAGCTGCTGATCTTTATGAG+TGG | 0.617272 | 8_3:-55292787 | Msa1296240:CDS |
| AAAATGAATATGGAAGTCAA+AGG | 0.621465 | 8_3:+55295975 | None:intergenic |
| AGATATGGGGAAATATGATG+AGG | 0.623153 | 8_3:-55292856 | Msa1296240:CDS |
| TGATTGGCTCTATCTTAGAG+AGG | 0.623421 | 8_3:-55293869 | Msa1296240:CDS |
| AGTCCATACCTATTGTTCAA+GGG | 0.625840 | 8_3:-55294331 | Msa1296240:CDS |
| AACTCATTTCAACAGACCAA+AGG | 0.636042 | 8_3:-55292633 | Msa1296240:CDS |
| GGACTGTGAGATAAGAGGCA+AGG | 0.637968 | 8_3:-55292834 | Msa1296240:CDS |
| TATGGCACCAAGGAAAAGAG+CGG | 0.642005 | 8_3:+55295840 | None:intergenic |
| GATATGGGGAAATATGATGA+GGG | 0.644477 | 8_3:-55292855 | Msa1296240:CDS |
| CTTGTACTTGATCTACCAGA+AGG | 0.644969 | 8_3:+55291826 | None:intergenic |
| GATCTTTATGAGTGGTTGCG+AGG | 0.647291 | 8_3:-55292779 | Msa1296240:CDS |
| GTCTTACACTGATCTGAACA+AGG | 0.649202 | 8_3:+55294931 | None:intergenic |
| ATTGGCTCTATCTTAGAGAG+GGG | 0.667912 | 8_3:-55293867 | Msa1296240:CDS |
| AAATTGAGGGAATTTCCAGA+AGG | 0.670524 | 8_3:-55292427 | Msa1296240:intron |
| GTTTCCTCGAGTAGAAAACT+CGG | 0.683978 | 8_3:+55293715 | None:intergenic |
| TATCAAAGGCAGTTGTACTG+TGG | 0.686468 | 8_3:-55295019 | Msa1296240:CDS |
| GTTTGTAGAAGTGAATAACA+AGG | 0.688747 | 8_3:+55292716 | None:intergenic |
| ACTGATTATAGGAAACGTTG+GGG | 0.698175 | 8_3:-55295630 | Msa1296240:CDS |
| TTTGGCATAAACATTGCAGG+CGG | 0.704279 | 8_3:+55293656 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAATTGTTACTTCAAAA+GGG | + | chr8_3:55292349-55292368 | None:intergenic | 15.0% |
| !!! | AAATTAATTGTTACTTCAAA+AGG | + | chr8_3:55292350-55292369 | None:intergenic | 15.0% |
| !!! | AAAATAATTAAGTGATTTTC+TGG | + | chr8_3:55293907-55293926 | None:intergenic | 15.0% |
| !!! | ATTCAGAATTTTCAATTTTA+TGG | - | chr8_3:55294595-55294614 | Msa1296240:intron | 15.0% |
| !! | AGTTAAATTTATCTAATAAC+AGG | + | chr8_3:55295849-55295868 | None:intergenic | 15.0% |
| !! | TGTAATGAAGAAAATGAATA+TGG | + | chr8_3:55291946-55291965 | None:intergenic | 20.0% |
| !!! | AAAGAATAAAGAACCTTTTA+TGG | + | chr8_3:55292089-55292108 | None:intergenic | 20.0% |
| !! | GTAACATAAAGTATGAAAAA+GGG | + | chr8_3:55292122-55292141 | None:intergenic | 20.0% |
| !! | TGTAACATAAAGTATGAAAA+AGG | + | chr8_3:55292123-55292142 | None:intergenic | 20.0% |
| !!! | TTTCTTGATATTTTTCTTGA+AGG | - | chr8_3:55292190-55292209 | Msa1296240:intron | 20.0% |
| !!! | TTCTTGATATTTTTCTTGAA+GGG | - | chr8_3:55292191-55292210 | Msa1296240:intron | 20.0% |
| !!! | TTTTTTCTTGAAAATTATGC+AGG | - | chr8_3:55292225-55292244 | Msa1296240:intron | 20.0% |
| !!! | TTTTTTTTTTCATGTGTGTT+TGG | - | chr8_3:55292367-55292386 | Msa1296240:intron | 20.0% |
| !! | ATTATTTCAATGTTACATAG+TGG | - | chr8_3:55292674-55292693 | Msa1296240:CDS | 20.0% |
| !! | ATTATCAACTTATTAAGGTT+AGG | - | chr8_3:55293105-55293124 | Msa1296240:intron | 20.0% |
| !! | TTGAAATGACATAATCAATA+TGG | + | chr8_3:55293172-55293191 | None:intergenic | 20.0% |
| !! | GTCATTTCAATTACAAATTT+CGG | - | chr8_3:55293182-55293201 | Msa1296240:intron | 20.0% |
| !! | TCATTTCAATTACAAATTTC+GGG | - | chr8_3:55293183-55293202 | Msa1296240:intron | 20.0% |
| !! | ATGAGTACTTATATTGTTTA+TGG | - | chr8_3:55293243-55293262 | Msa1296240:intron | 20.0% |
| !!! | TAATGTAGTTTTGTTAGAAT+TGG | - | chr8_3:55294704-55294723 | Msa1296240:intron | 20.0% |
| !!! | TTTTTGGAGTTAATAAACAA+AGG | - | chr8_3:55295403-55295422 | Msa1296240:CDS | 20.0% |
| !! | GTAACTTAACAATATTAAGT+AGG | - | chr8_3:55295551-55295570 | Msa1296240:intron | 20.0% |
| !! | ACGTTTATTCCATAAAAAAA+GGG | + | chr8_3:55295718-55295737 | None:intergenic | 20.0% |
| !! | AACGTTTATTCCATAAAAAA+AGG | + | chr8_3:55295719-55295738 | None:intergenic | 20.0% |
| ! | CAAAAAACAAGAAGGAATAT+TGG | + | chr8_3:55291890-55291909 | None:intergenic | 25.0% |
| ! | TAATAGGTCAAAAAACAAGA+AGG | + | chr8_3:55291898-55291917 | None:intergenic | 25.0% |
| ! | GAGAAAAAAGGGAAATTAAT+AGG | + | chr8_3:55291914-55291933 | None:intergenic | 25.0% |
| ! | AAAATGAATATGGAAGTCAA+AGG | + | chr8_3:55291936-55291955 | None:intergenic | 25.0% |
| ! | ATCCTTTATTACTAGTATCA+TGG | - | chr8_3:55291982-55292001 | Msa1296240:CDS | 25.0% |
| !! | TTCCTAATTCTTTAGAAGAT+TGG | - | chr8_3:55292011-55292030 | Msa1296240:CDS | 25.0% |
| !! | ATCCAATCTTCTAAAGAATT+AGG | + | chr8_3:55292016-55292035 | None:intergenic | 25.0% |
| ! | AAGTATGAAAAAGGGTAAAA+GGG | + | chr8_3:55292114-55292133 | None:intergenic | 25.0% |
| ! | AAAGTATGAAAAAGGGTAAA+AGG | + | chr8_3:55292115-55292134 | None:intergenic | 25.0% |
| !! | TCTTGATATTTTTCTTGAAG+GGG | - | chr8_3:55292192-55292211 | Msa1296240:intron | 25.0% |
| !!! | AATGTTTTTTTTGTGTTTGC+AGG | - | chr8_3:55292413-55292432 | Msa1296240:intron | 25.0% |
| !!! | ATGTTTTTTTTGTGTTTGCA+GGG | - | chr8_3:55292414-55292433 | Msa1296240:intron | 25.0% |
| ! | AGTACAAAATGTTGTAATAG+TGG | - | chr8_3:55292753-55292772 | Msa1296240:CDS | 25.0% |
| ! | TATTTGCTTACATTTAACTC+AGG | - | chr8_3:55292850-55292869 | Msa1296240:CDS | 25.0% |
| ! | TTTGTTTATTTATGTGACGT+GGG | - | chr8_3:55293024-55293043 | Msa1296240:intron | 25.0% |
| ! | CAAAAAAACGTTATCTTAAC+TGG | + | chr8_3:55293067-55293086 | None:intergenic | 25.0% |
| ! | CGCAAATTATCAACTTATTA+AGG | - | chr8_3:55293100-55293119 | Msa1296240:intron | 25.0% |
| ! | TGAAAAAAAACCTATCAACA+TGG | + | chr8_3:55293281-55293300 | None:intergenic | 25.0% |
| ! | TTGCAAATAAACGATATGTT+TGG | + | chr8_3:55293428-55293447 | None:intergenic | 25.0% |
| ! | AACCTGATATACTATAATAG+AGG | + | chr8_3:55293761-55293780 | None:intergenic | 25.0% |
| !!! | ACCAAAATTGATTTTGAATG+AGG | + | chr8_3:55293874-55293893 | None:intergenic | 25.0% |
| ! | TTGATGAATATACGAATGAT+TGG | - | chr8_3:55294023-55294042 | Msa1296240:intron | 25.0% |
| ! | AGATAGGATAAGAAAACAAT+TGG | + | chr8_3:55294092-55294111 | None:intergenic | 25.0% |
| ! | CAAAGAATTACTATGACTAT+TGG | + | chr8_3:55294407-55294426 | None:intergenic | 25.0% |
| ! | TGATCGACAAATTAATCTTA+GGG | + | chr8_3:55294515-55294534 | None:intergenic | 25.0% |
| !!! | TTTTGTTAGAATTGGTTCAA+AGG | - | chr8_3:55294712-55294731 | Msa1296240:intron | 25.0% |
| ! | GTAATATATAACCCTAAGTA+AGG | + | chr8_3:55294834-55294853 | None:intergenic | 25.0% |
| ! | TCAAGGGTAATATTATAAAC+TGG | + | chr8_3:55294880-55294899 | None:intergenic | 25.0% |
| !! | AAAGTTGCTTAAAACTTGTT+GGG | + | chr8_3:55294953-55294972 | None:intergenic | 25.0% |
| ! | AAAAGTTGCTTAAAACTTGT+TGG | + | chr8_3:55294954-55294973 | None:intergenic | 25.0% |
| !! | TTGGAAAAAGTTGTTCTTTT+TGG | - | chr8_3:55295387-55295406 | Msa1296240:CDS | 25.0% |
| ! | ATTGATATAACAATACCTTC+TGG | + | chr8_3:55295499-55295518 | None:intergenic | 25.0% |
| ! | TTTCAATCTTCATGTATGTT+TGG | - | chr8_3:55295592-55295611 | Msa1296240:CDS | 25.0% |
| !!! | AGATGTTTCTGAAAAGATTT+TGG | - | chr8_3:55296036-55296055 | Msa1296240:five_prime_UTR | 25.0% |
| !!! | GATTTTGGTTACTCATTATT+TGG | - | chr8_3:55296051-55296070 | Msa1296240:five_prime_UTR | 25.0% |
| ! | TAGAATCATTCTCAGGATTT+TGG | + | chr8_3:55291802-55291821 | None:intergenic | 30.0% |
| ACTATGTTAGAATCATTCTC+AGG | + | chr8_3:55291809-55291828 | None:intergenic | 30.0% | |
| AAAACAAGAAGGAATATTGG+TGG | + | chr8_3:55291887-55291906 | None:intergenic | 30.0% | |
| AGCCATGATACTAGTAATAA+AGG | + | chr8_3:55291987-55292006 | None:intergenic | 30.0% | |
| !! | AAATTATGCAGGCTTTATTG+TGG | - | chr8_3:55292236-55292255 | Msa1296240:intron | 30.0% |
| !! | AATTATGCAGGCTTTATTGT+GGG | - | chr8_3:55292237-55292256 | Msa1296240:intron | 30.0% |
| ! | ATACTGATTATAGGAAACGT+TGG | - | chr8_3:55292276-55292295 | Msa1296240:intron | 30.0% |
| ! | TACTGATTATAGGAAACGTT+GGG | - | chr8_3:55292277-55292296 | Msa1296240:intron | 30.0% |
| TGACTCATTATCATATCTGA+AGG | + | chr8_3:55292587-55292606 | None:intergenic | 30.0% | |
| GCTATAATATTGTTGTGTAG+CGG | - | chr8_3:55292777-55292796 | Msa1296240:CDS | 30.0% | |
| CAATCGCAAATTGTAGAAAA+TGG | + | chr8_3:55292818-55292837 | None:intergenic | 30.0% | |
| TCAAGTAACTTGGATATGAA+TGG | + | chr8_3:55292940-55292959 | None:intergenic | 30.0% | |
| TTCATATCCAAGTTACTTGA+AGG | - | chr8_3:55292940-55292959 | Msa1296240:intron | 30.0% | |
| CACGTCACATAAATAAACAA+AGG | + | chr8_3:55293025-55293044 | None:intergenic | 30.0% | |
| ! | CTTTGTTTATTTATGTGACG+TGG | - | chr8_3:55293023-55293042 | Msa1296240:intron | 30.0% |
| ATATTGTCAAACCAGCAATT+GGG | + | chr8_3:55293666-55293685 | None:intergenic | 30.0% | |
| AATATTGTCAAACCAGCAAT+TGG | + | chr8_3:55293667-55293686 | None:intergenic | 30.0% | |
| TGCCTCTATTATAGTATATC+AGG | - | chr8_3:55293756-55293775 | Msa1296240:intron | 30.0% | |
| ! | TCAATTTTACACTGAGACTT+AGG | + | chr8_3:55293812-55293831 | None:intergenic | 30.0% |
| ! | GCCTCATTCAAAATCAATTT+TGG | - | chr8_3:55293870-55293889 | Msa1296240:CDS | 30.0% |
| !!! | TAAGTGATTTTCTGGTTATG+TGG | + | chr8_3:55293899-55293918 | None:intergenic | 30.0% |
| CACAAAAAGGTCAAAAAAGA+AGG | + | chr8_3:55293944-55293963 | None:intergenic | 30.0% | |
| ! | TTTGACCTTTTTGTGAATGT+AGG | - | chr8_3:55293949-55293968 | Msa1296240:intron | 30.0% |
| TCTTTCCTACATTCACAAAA+AGG | + | chr8_3:55293957-55293976 | None:intergenic | 30.0% | |
| CAATTGGAAGAAGTTTACTT+TGG | + | chr8_3:55294076-55294095 | None:intergenic | 30.0% | |
| AAGCAGATCAAATACTACTA+TGG | - | chr8_3:55294227-55294246 | Msa1296240:CDS | 30.0% | |
| GACAATTCAAGAAGTGAAAA+TGG | - | chr8_3:55294302-55294321 | Msa1296240:CDS | 30.0% | |
| ATTAATCTTAGGGATCACTT+TGG | + | chr8_3:55294505-55294524 | None:intergenic | 30.0% | |
| GTGATCGACAAATTAATCTT+AGG | + | chr8_3:55294516-55294535 | None:intergenic | 30.0% | |
| ATATATGATATTGTCCCGAA+CGG | + | chr8_3:55294545-55294564 | None:intergenic | 30.0% | |
| ATCATTGATGTCGTGTAATT+TGG | + | chr8_3:55294651-55294670 | None:intergenic | 30.0% | |
| ! | GCATTCTATGTTTGCATTTT+TGG | + | chr8_3:55294747-55294766 | None:intergenic | 30.0% |
| TATAATATTACCCTGCAGTA+CGG | + | chr8_3:55294904-55294923 | None:intergenic | 30.0% | |
| TGCAGGGTAATATTATAAAC+TGG | - | chr8_3:55294907-55294926 | Msa1296240:intron | 30.0% | |
| AAAATGTATTGCGACAGATA+TGG | - | chr8_3:55295037-55295056 | Msa1296240:CDS | 30.0% | |
| AAATGTATTGCGACAGATAT+GGG | - | chr8_3:55295038-55295057 | Msa1296240:CDS | 30.0% | |
| GTTTGTAGAAGTGAATAACA+AGG | + | chr8_3:55295195-55295214 | None:intergenic | 30.0% | |
| ACAGATAAGGGTTATTAAGT+TGG | - | chr8_3:55295344-55295363 | Msa1296240:CDS | 30.0% | |
| ATAAACAAAGGTTGAAGACT+TGG | - | chr8_3:55295415-55295434 | Msa1296240:CDS | 30.0% | |
| TAAACAAAGGTTGAAGACTT+GGG | - | chr8_3:55295416-55295435 | Msa1296240:CDS | 30.0% | |
| CAATATTAAGTAGGTATGCA+TGG | - | chr8_3:55295560-55295579 | Msa1296240:intron | 30.0% | |
| CGTATAAACATACACCAAAA+TGG | - | chr8_3:55295640-55295659 | Msa1296240:CDS | 30.0% | |
| ATAAACATACACCAAAATGG+TGG | - | chr8_3:55295643-55295662 | Msa1296240:CDS | 30.0% | |
| TAAACATACACCAAAATGGT+GGG | - | chr8_3:55295644-55295663 | Msa1296240:CDS | 30.0% | |
| ATATATCATGACCTAACACT+TGG | - | chr8_3:55295746-55295765 | Msa1296240:intron | 30.0% | |
| TATATCATGACCTAACACTT+GGG | - | chr8_3:55295747-55295766 | Msa1296240:intron | 30.0% | |
| GCAATGATGAATGAATTGTT+AGG | - | chr8_3:55295876-55295895 | Msa1296240:CDS | 30.0% | |
| GAATGAATTGTTAGGATGAT+TGG | - | chr8_3:55295884-55295903 | Msa1296240:CDS | 30.0% | |
| AGCATTATTCACTCATTCAT+TGG | - | chr8_3:55295967-55295986 | Msa1296240:five_prime_UTR | 30.0% | |
| GGAAGTCAAAGGAGAAAAAA+GGG | + | chr8_3:55291925-55291944 | None:intergenic | 35.0% | |
| TGGAAGTCAAAGGAGAAAAA+AGG | + | chr8_3:55291926-55291945 | None:intergenic | 35.0% | |
| ATCAGTATCAAAGCAGCAAT+AGG | + | chr8_3:55292264-55292283 | None:intergenic | 35.0% | |
| ! | GCTGCTTTGATACTGATTAT+AGG | - | chr8_3:55292267-55292286 | Msa1296240:intron | 35.0% |
| ACTGATTATAGGAAACGTTG+GGG | - | chr8_3:55292278-55292297 | Msa1296240:intron | 35.0% | |
| GAAATTCTTGCACTGTATTG+TGG | - | chr8_3:55292609-55292628 | Msa1296240:CDS | 35.0% | |
| TCGCAAATTGTAGAAAATGG+AGG | + | chr8_3:55292815-55292834 | None:intergenic | 35.0% | |
| TGCTTACATTTAACTCAGGA+TGG | - | chr8_3:55292854-55292873 | Msa1296240:CDS | 35.0% | |
| CTTATTAAGGTTAGGTCGTT+TGG | - | chr8_3:55293113-55293132 | Msa1296240:intron | 35.0% | |
| ACAACTTATGCCATGTTGAT+AGG | - | chr8_3:55293268-55293287 | Msa1296240:intron | 35.0% | |
| CATAAACTCTGCTTATTTGC+AGG | - | chr8_3:55293467-55293486 | Msa1296240:intron | 35.0% | |
| ATAGCAATTGCAGTGAATAG+AGG | + | chr8_3:55293550-55293569 | None:intergenic | 35.0% | |
| AGTCCATACCTATTGTTCAA+GGG | - | chr8_3:55293577-55293596 | Msa1296240:intron | 35.0% | |
| CATGATTTAATCAGCAGAGA+AGG | - | chr8_3:55293616-55293635 | Msa1296240:CDS | 35.0% | |
| ACACAAACTGTTTCAAGGAA+TGG | + | chr8_3:55293643-55293662 | None:intergenic | 35.0% | |
| ! | CTGGTTTGACAATATTTGTG+TGG | - | chr8_3:55293671-55293690 | Msa1296240:CDS | 35.0% |
| ! | TGTCATTGCCAGCATTTTAT+TGG | - | chr8_3:55293702-55293721 | Msa1296240:CDS | 35.0% |
| ! | GTTGTCTCTAGCATTTTTGT+CGG | - | chr8_3:55293727-55293746 | Msa1296240:CDS | 35.0% |
| TTTACACTGAGACTTAGGAA+TGG | + | chr8_3:55293807-55293826 | None:intergenic | 35.0% | |
| CTATATAAGCCAAACCTCTA+CGG | + | chr8_3:55293985-55294004 | None:intergenic | 35.0% | |
| ! | TAGAGGTTTGGCTTATATAG+TGG | - | chr8_3:55293985-55294004 | Msa1296240:intron | 35.0% |
| ! | TTTGGCTTATATAGTGGCAA+TGG | - | chr8_3:55293991-55294010 | Msa1296240:intron | 35.0% |
| CAACAGAATAAATGGCAGAT+AGG | + | chr8_3:55294108-55294127 | None:intergenic | 35.0% | |
| GTCGATGTCAACAGAATAAA+TGG | + | chr8_3:55294116-55294135 | None:intergenic | 35.0% | |
| ACCATCTTCTTTCGATATTG+GGG | + | chr8_3:55294162-55294181 | None:intergenic | 35.0% | |
| GACCATCTTCTTTCGATATT+GGG | + | chr8_3:55294163-55294182 | None:intergenic | 35.0% | |
| AGACCATCTTCTTTCGATAT+TGG | + | chr8_3:55294164-55294183 | None:intergenic | 35.0% | |
| AAGTTTGGCATAAACATTGC+AGG | + | chr8_3:55294258-55294277 | None:intergenic | 35.0% | |
| ! | TCACATTAGTTCTCATGAGT+TGG | + | chr8_3:55294576-55294595 | None:intergenic | 35.0% |
| TACACGACATCAATGATTTC+AGG | - | chr8_3:55294654-55294673 | Msa1296240:intron | 35.0% | |
| AGAATGCACAAGATTTGATC+AGG | - | chr8_3:55294760-55294779 | Msa1296240:intron | 35.0% | |
| CTAGGAGATGTATGCAAAAT+TGG | + | chr8_3:55294793-55294812 | None:intergenic | 35.0% | |
| !! | TGCTTAAAACTTGTTGGGTA+TGG | + | chr8_3:55294948-55294967 | None:intergenic | 35.0% |
| AATGTATTGCGACAGATATG+GGG | - | chr8_3:55295039-55295058 | Msa1296240:CDS | 35.0% | |
| AGATATGGGGAAATATGATG+AGG | - | chr8_3:55295052-55295071 | Msa1296240:intron | 35.0% | |
| GATATGGGGAAATATGATGA+GGG | - | chr8_3:55295053-55295072 | Msa1296240:intron | 35.0% | |
| GATAAGAGGCAAGGAATTAT+TGG | - | chr8_3:55295083-55295102 | Msa1296240:intron | 35.0% | |
| AACTCATTTCAACAGACCAA+AGG | - | chr8_3:55295275-55295294 | Msa1296240:intron | 35.0% | |
| ! | TTGGTTCTTCAATCCTGTTA+TGG | - | chr8_3:55295311-55295330 | Msa1296240:CDS | 35.0% |
| !! | GATAAGGGTTATTAAGTTGG+TGG | - | chr8_3:55295347-55295366 | Msa1296240:CDS | 35.0% |
| AAATTGAGGGAATTTCCAGA+AGG | - | chr8_3:55295481-55295500 | Msa1296240:intron | 35.0% | |
| !! | TGAAGGTGTTTAGCCAAATA+GGG | + | chr8_3:55295773-55295792 | None:intergenic | 35.0% |
| AGGATGATTGGAATGATAAG+AGG | - | chr8_3:55295896-55295915 | Msa1296240:CDS | 35.0% | |
| GGAGAAAGATGCTTCAAAAA+AGG | - | chr8_3:55295988-55296007 | Msa1296240:five_prime_UTR | 35.0% | |
| AGATGCTTCAAAAAAGGCTT+TGG | - | chr8_3:55295994-55296013 | Msa1296240:five_prime_UTR | 35.0% | |
| TATTTGGAGAAAGATCCTTC+TGG | - | chr8_3:55296067-55296086 | Msa1296240:five_prime_UTR | 35.0% | |
| ! | TTCTTTTCCGCTCTTTTCCT+TGG | - | chr8_3:55292061-55292080 | Msa1296240:intron | 40.0% |
| !!! | CTTTTCCTTGGTGCCATAAA+AGG | - | chr8_3:55292073-55292092 | Msa1296240:intron | 40.0% |
| ! | AAGAACCTTTTATGGCACCA+AGG | + | chr8_3:55292081-55292100 | None:intergenic | 40.0% |
| !! | ATTGCTTTGCCAGCTTTGTT+TGG | - | chr8_3:55292475-55292494 | Msa1296240:CDS | 40.0% |
| AACCATATGCCAAACAAAGC+TGG | + | chr8_3:55292487-55292506 | None:intergenic | 40.0% | |
| !! | AGCTTTGTTTGGCATATGGT+TGG | - | chr8_3:55292486-55292505 | Msa1296240:CDS | 40.0% |
| !! | GCTTTGTTTGGCATATGGTT+GGG | - | chr8_3:55292487-55292506 | Msa1296240:CDS | 40.0% |
| TTTGGCATATGGTTGGGTTT+AGG | - | chr8_3:55292493-55292512 | Msa1296240:CDS | 40.0% | |
| ! | ATAGCTGGTAGTGTTCTTGT+TGG | - | chr8_3:55292517-55292536 | Msa1296240:CDS | 40.0% |
| ! | GTAGTGTTCTTGTTGGTGTT+GGG | - | chr8_3:55292524-55292543 | Msa1296240:CDS | 40.0% |
| ! | GGTATGGATTTTTCACTCCT+TGG | - | chr8_3:55292545-55292564 | Msa1296240:CDS | 40.0% |
| TCCTTGGATTTCAACTTTCG+AGG | - | chr8_3:55292561-55292580 | Msa1296240:CDS | 40.0% | |
| TTTAACTCAGGATGGAACCT+TGG | - | chr8_3:55292862-55292881 | Msa1296240:intron | 40.0% | |
| TTAACTCAGGATGGAACCTT+GGG | - | chr8_3:55292863-55292882 | Msa1296240:intron | 40.0% | |
| TATCAAAGGCAGTTGTACTG+TGG | - | chr8_3:55292889-55292908 | Msa1296240:intron | 40.0% | |
| CGTAGTTCCTTCAAGTAACT+TGG | + | chr8_3:55292950-55292969 | None:intergenic | 40.0% | |
| GTCTTACACTGATCTGAACA+AGG | + | chr8_3:55292980-55292999 | None:intergenic | 40.0% | |
| CAGATCAGTGTAAGACACTA+AGG | - | chr8_3:55292984-55293003 | Msa1296240:intron | 40.0% | |
| ACACTAAGGTAATCATCACG+CGG | - | chr8_3:55292998-55293017 | Msa1296240:intron | 40.0% | |
| TGCAGGTTAATTCATGTTCC+TGG | - | chr8_3:55293484-55293503 | Msa1296240:intron | 40.0% | |
| TTCCTGGATGTGTGATTGTA+GGG | - | chr8_3:55293500-55293519 | Msa1296240:intron | 40.0% | |
| ATGTGTGATTGTAGGGATAG+TGG | - | chr8_3:55293507-55293526 | Msa1296240:intron | 40.0% | |
| TGTGTGATTGTAGGGATAGT+GGG | - | chr8_3:55293508-55293527 | Msa1296240:intron | 40.0% | |
| GAGTCCATACCTATTGTTCA+AGG | - | chr8_3:55293576-55293595 | Msa1296240:intron | 40.0% | |
| TTGGGACACAAACTGTTTCA+AGG | + | chr8_3:55293648-55293667 | None:intergenic | 40.0% | |
| GACAACAGCCAATAAAATGC+TGG | + | chr8_3:55293713-55293732 | None:intergenic | 40.0% | |
| TAGGAAAGATCTTTCCGTAG+AGG | - | chr8_3:55293968-55293987 | Msa1296240:intron | 40.0% | |
| AAGATCTTTCCGTAGAGGTT+TGG | - | chr8_3:55293973-55293992 | Msa1296240:intron | 40.0% | |
| !! | TGATTGGCTCTATCTTAGAG+AGG | - | chr8_3:55294039-55294058 | Msa1296240:intron | 40.0% |
| !! | GATTGGCTCTATCTTAGAGA+GGG | - | chr8_3:55294040-55294059 | Msa1296240:intron | 40.0% |
| !! | ATTGGCTCTATCTTAGAGAG+GGG | - | chr8_3:55294041-55294060 | Msa1296240:intron | 40.0% |
| GTTTCCTCGAGTAGAAAACT+CGG | + | chr8_3:55294196-55294215 | None:intergenic | 40.0% | |
| ! | TTTTCTACTCGAGGAAACAG+TGG | - | chr8_3:55294198-55294217 | Msa1296240:CDS | 40.0% |
| TTTCTACTCGAGGAAACAGT+GGG | - | chr8_3:55294199-55294218 | Msa1296240:CDS | 40.0% | |
| TTTGGCATAAACATTGCAGG+CGG | + | chr8_3:55294255-55294274 | None:intergenic | 40.0% | |
| GATCTTGAAGGAGCTAAGTT+TGG | + | chr8_3:55294273-55294292 | None:intergenic | 40.0% | |
| GTCTCTCTAACTGATCTTGA+AGG | + | chr8_3:55294285-55294304 | None:intergenic | 40.0% | |
| TCAAGAAGTGAAAATGGTGC+AGG | - | chr8_3:55294308-55294327 | Msa1296240:CDS | 40.0% | |
| GTCGATCACAATATTCCGTT+CGG | - | chr8_3:55294527-55294546 | Msa1296240:intron | 40.0% | |
| TCGATCACAATATTCCGTTC+GGG | - | chr8_3:55294528-55294547 | Msa1296240:intron | 40.0% | |
| TGGGTATGGCTCATTGTTTA+CGG | + | chr8_3:55294934-55294953 | None:intergenic | 40.0% | |
| ! | GTTAACGAAGCATCCATAGT+TGG | - | chr8_3:55295159-55295178 | Msa1296240:intron | 40.0% |
| CAATCCAACAACTTGTCCTT+TGG | + | chr8_3:55295294-55295313 | None:intergenic | 40.0% | |
| CAAAGGACAAGTTGTTGGAT+TGG | - | chr8_3:55295292-55295311 | Msa1296240:intron | 40.0% | |
| CAATCCTGTTATGGTTCTCA+AGG | - | chr8_3:55295320-55295339 | Msa1296240:CDS | 40.0% | |
| TGTTCCTTGAGAACCATAAC+AGG | + | chr8_3:55295327-55295346 | None:intergenic | 40.0% | |
| TGGTTCTCAAGGAACAGATA+AGG | - | chr8_3:55295331-55295350 | Msa1296240:CDS | 40.0% | |
| GGTTCTCAAGGAACAGATAA+GGG | - | chr8_3:55295332-55295351 | Msa1296240:CDS | 40.0% | |
| !! | AGGGTTATTAAGTTGGTGGA+AGG | - | chr8_3:55295351-55295370 | Msa1296240:CDS | 40.0% |
| AGGTTGAAGACTTGGGATAA+TGG | - | chr8_3:55295423-55295442 | Msa1296240:CDS | 40.0% | |
| !! | GGTAGCTTATTGATTCCTGA+TGG | - | chr8_3:55295444-55295463 | Msa1296240:CDS | 40.0% |
| TCTTAGAGCTGCTCAAATTG+AGG | - | chr8_3:55295467-55295486 | Msa1296240:CDS | 40.0% | |
| CTTAGAGCTGCTCAAATTGA+GGG | - | chr8_3:55295468-55295487 | Msa1296240:CDS | 40.0% | |
| !!! | ACCAGACTGCCCTTTTTTTA+TGG | - | chr8_3:55295706-55295725 | Msa1296240:intron | 40.0% |
| TCCATAAAAAAAGGGCAGTC+TGG | + | chr8_3:55295710-55295729 | None:intergenic | 40.0% | |
| !! | CTGAAGGTGTTTAGCCAAAT+AGG | + | chr8_3:55295774-55295793 | None:intergenic | 40.0% |
| CAAAGCTTCCAACATACAGA+AGG | - | chr8_3:55295924-55295943 | Msa1296240:exon | 40.0% | |
| CGAAACTTCCTTCTGTATGT+TGG | + | chr8_3:55295935-55295954 | None:intergenic | 40.0% | |
| CTTGTACTTGATCTACCAGA+AGG | + | chr8_3:55296085-55296104 | None:intergenic | 40.0% | |
| CTTCTGGTAGATCAAGTACA+AGG | - | chr8_3:55296083-55296102 | Msa1296240:five_prime_UTR | 40.0% | |
| TATGGCACCAAGGAAAAGAG+CGG | + | chr8_3:55292071-55292090 | None:intergenic | 45.0% | |
| ! | AGGAAACGTTGGGGTGATTT+TGG | - | chr8_3:55292287-55292306 | Msa1296240:intron | 45.0% |
| ! | GGAAACGTTGGGGTGATTTT+GGG | - | chr8_3:55292288-55292307 | Msa1296240:intron | 45.0% |
| !! | TGCCAGCTTTGTTTGGCATA+TGG | - | chr8_3:55292482-55292501 | Msa1296240:CDS | 45.0% |
| TGGTTGGGTTTAGGTATAGC+TGG | - | chr8_3:55292502-55292521 | Msa1296240:CDS | 45.0% | |
| GGTAGTGTTCTTGTTGGTGT+TGG | - | chr8_3:55292523-55292542 | Msa1296240:CDS | 45.0% | |
| !! | GTTCTTGTTGGTGTTGGGTA+TGG | - | chr8_3:55292529-55292548 | Msa1296240:CDS | 45.0% |
| GCCTCGAAAGTTGAAATCCA+AGG | + | chr8_3:55292565-55292584 | None:intergenic | 45.0% | |
| GGAACCTTGGGAACTATCAA+AGG | - | chr8_3:55292875-55292894 | Msa1296240:intron | 45.0% | |
| ! | ACTGCCTTTGATAGTTCCCA+AGG | + | chr8_3:55292882-55292901 | None:intergenic | 45.0% |
| AAGGCAGTTGTACTGTGGTT+AGG | - | chr8_3:55292894-55292913 | Msa1296240:intron | 45.0% | |
| AGGCAGTTGTACTGTGGTTA+GGG | - | chr8_3:55292895-55292914 | Msa1296240:intron | 45.0% | |
| GTTCCTGGATGTGTGATTGT+AGG | - | chr8_3:55293499-55293518 | Msa1296240:intron | 45.0% | |
| ATCCCTACAATCACACATCC+AGG | + | chr8_3:55293505-55293524 | None:intergenic | 45.0% | |
| CAGCCCTTGAACAATAGGTA+TGG | + | chr8_3:55293583-55293602 | None:intergenic | 45.0% | |
| CATACCTATTGTTCAAGGGC+TGG | - | chr8_3:55293581-55293600 | Msa1296240:intron | 45.0% | |
| TGTACCAGCCCTTGAACAAT+AGG | + | chr8_3:55293588-55293607 | None:intergenic | 45.0% | |
| ACAGTTTGTGTCCCAATTGC+TGG | - | chr8_3:55293652-55293671 | Msa1296240:CDS | 45.0% | |
| ATGCTGGCAATGACAACAAG+AGG | + | chr8_3:55293697-55293716 | None:intergenic | 45.0% | |
| ACATCAACTTTCTTGCAGCC+AGG | - | chr8_3:55294136-55294155 | Msa1296240:intron | 45.0% | |
| GCCCCAATATCGAAAGAAGA+TGG | - | chr8_3:55294158-55294177 | Msa1296240:CDS | 45.0% | |
| !! | ATCCGTCTCTGAAACTGTAG+CGG | - | chr8_3:55294446-55294465 | Msa1296240:intron | 45.0% |
| AACCGCTACAGTTTCAGAGA+CGG | + | chr8_3:55294451-55294470 | None:intergenic | 45.0% | |
| ATACATCTCCTAGTGCAGAG+TGG | - | chr8_3:55294800-55294819 | Msa1296240:intron | 45.0% | |
| ATGAGGGACTGTGAGATAAG+AGG | - | chr8_3:55295069-55295088 | Msa1296240:intron | 45.0% | |
| CAGCTGCTGATCTTTATGAG+TGG | - | chr8_3:55295121-55295140 | Msa1296240:intron | 45.0% | |
| GATCTTTATGAGTGGTTGCG+AGG | - | chr8_3:55295129-55295148 | Msa1296240:intron | 45.0% | |
| ! | GAAGCATCCATAGTTGGTGT+TGG | - | chr8_3:55295165-55295184 | Msa1296240:intron | 45.0% |
| AGGCAATCCAACACCAACTA+TGG | + | chr8_3:55295175-55295194 | None:intergenic | 45.0% | |
| TCGATCAAAGCCAACTCAAG+TGG | - | chr8_3:55295225-55295244 | Msa1296240:intron | 45.0% | |
| CAGCAATACACCACTTGAGT+TGG | + | chr8_3:55295238-55295257 | None:intergenic | 45.0% | |
| CAGACCAAAGGACAAGTTGT+TGG | - | chr8_3:55295287-55295306 | Msa1296240:intron | 45.0% | |
| GGAAGGTGAAGTGAGATACT+TGG | - | chr8_3:55295368-55295387 | Msa1296240:CDS | 45.0% | |
| TGGCTAAACACCTTCAGACA+AGG | - | chr8_3:55295777-55295796 | Msa1296240:intron | 45.0% | |
| GGCTAAACACCTTCAGACAA+GGG | - | chr8_3:55295778-55295797 | Msa1296240:intron | 45.0% | |
| TGACATAAGCCCTTGTCTGA+AGG | + | chr8_3:55295790-55295809 | None:intergenic | 45.0% | |
| ! | GGCTTTGGTTACACATTCTC+AGG | - | chr8_3:55296009-55296028 | Msa1296240:five_prime_UTR | 45.0% |
| !! | TATTGGTGGCGTGTGTTGCA+AGG | + | chr8_3:55291873-55291892 | None:intergenic | 50.0% |
| GGGATTGTTTCCTGCACATG+TGG | - | chr8_3:55292308-55292327 | Msa1296240:intron | 50.0% | |
| TGTTTCCTGCACATGTGGCT+TGG | - | chr8_3:55292313-55292332 | Msa1296240:intron | 50.0% | |
| CTTCTTTCGATATTGGGGCC+TGG | + | chr8_3:55294157-55294176 | None:intergenic | 50.0% | |
| ! | TCGTCCGAGTTTTCTACTCG+AGG | - | chr8_3:55294189-55294208 | Msa1296240:CDS | 50.0% |
| TGGCTGCAGTGCCTTACTTA+GGG | - | chr8_3:55294820-55294839 | Msa1296240:intron | 50.0% | |
| TTACCCTTGAACCGTACTGC+AGG | - | chr8_3:55294890-55294909 | Msa1296240:intron | 50.0% | |
| TACCCTTGAACCGTACTGCA+GGG | - | chr8_3:55294891-55294910 | Msa1296240:intron | 50.0% | |
| TACCCTGCAGTACGGTTCAA+GGG | + | chr8_3:55294896-55294915 | None:intergenic | 50.0% | |
| TTACCCTGCAGTACGGTTCA+AGG | + | chr8_3:55294897-55294916 | None:intergenic | 50.0% | |
| GGACTGTGAGATAAGAGGCA+AGG | - | chr8_3:55295074-55295093 | Msa1296240:intron | 50.0% | |
| !! | TGAGCAGCTCTAAGACCATC+AGG | + | chr8_3:55295462-55295481 | None:intergenic | 50.0% |
| CCAAATAGGGCCCAAGTGTT+AGG | + | chr8_3:55295760-55295779 | None:intergenic | 50.0% | |
| CCTAACACTTGGGCCCTATT+TGG | - | chr8_3:55295757-55295776 | Msa1296240:intron | 50.0% | |
| ! | AACAGGTTAGCTCGTGCGTT+TGG | + | chr8_3:55295832-55295851 | None:intergenic | 50.0% |
| ACAGTCCAAGCCACATGTGC+AGG | + | chr8_3:55292321-55292340 | None:intergenic | 55.0% | |
| GTGGCTGCAGTGCCTTACTT+AGG | - | chr8_3:55294819-55294838 | Msa1296240:intron | 55.0% | |
| ! | GGGAAGGAGTCCCACCATTT+TGG | + | chr8_3:55295657-55295676 | None:intergenic | 55.0% |
| CACTGCAGCCACTCTGCACT+AGG | + | chr8_3:55294811-55294830 | None:intergenic | 60.0% | |
| CTTCCCAGAACCTGCGCATG+CGG | - | chr8_3:55295671-55295690 | Msa1296240:intron | 60.0% | |
| TTCCCAGAACCTGCGCATGC+GGG | - | chr8_3:55295672-55295691 | Msa1296240:intron | 60.0% | |
| ACTAAAGCTCCCGCATGCGC+AGG | + | chr8_3:55295684-55295703 | None:intergenic | 60.0% | |
| !! | CGCATGCGCAGGTTCTGGGA+AGG | + | chr8_3:55295673-55295692 | None:intergenic | 65.0% |
| CTCCCGCATGCGCAGGTTCT+GGG | + | chr8_3:55295677-55295696 | None:intergenic | 65.0% | |
| GCTCCCGCATGCGCAGGTTC+TGG | + | chr8_3:55295678-55295697 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 55291789 | 55296141 | 55291789 | ID=Msa1296240;Name=Msa1296240 |
| chr8_3 | mRNA | 55291789 | 55296141 | 55291789 | ID=Msa1296240-mRNA-1;Parent=Msa1296240;Name=Msa1296240-mRNA-1;_AED=0.14;_eAED=0.14;_QI=212|0.87|0.33|0.88|1|1|9|0|597 |
| chr8_3 | exon | 55291789 | 55292032 | 55291789 | ID=Msa1296240-mRNA-1:exon:15885;Parent=Msa1296240-mRNA-1 |
| chr8_3 | exon | 55292428 | 55292876 | 55292428 | ID=Msa1296240-mRNA-1:exon:15884;Parent=Msa1296240-mRNA-1 |
| chr8_3 | exon | 55293601 | 55293772 | 55293601 | ID=Msa1296240-mRNA-1:exon:15883;Parent=Msa1296240-mRNA-1 |
| chr8_3 | exon | 55293853 | 55293959 | 55293853 | ID=Msa1296240-mRNA-1:exon:15882;Parent=Msa1296240-mRNA-1 |
| chr8_3 | exon | 55294153 | 55294441 | 55294153 | ID=Msa1296240-mRNA-1:exon:15881;Parent=Msa1296240-mRNA-1 |
| chr8_3 | exon | 55294925 | 55295058 | 55294925 | ID=Msa1296240-mRNA-1:exon:15880;Parent=Msa1296240-mRNA-1 |
| chr8_3 | exon | 55295300 | 55295495 | 55295300 | ID=Msa1296240-mRNA-1:exon:15879;Parent=Msa1296240-mRNA-1 |
| chr8_3 | exon | 55295575 | 55295683 | 55295575 | ID=Msa1296240-mRNA-1:exon:15878;Parent=Msa1296240-mRNA-1 |
| chr8_3 | exon | 55295836 | 55296141 | 55295836 | ID=Msa1296240-mRNA-1:exon:15877;Parent=Msa1296240-mRNA-1 |
| chr8_3 | five_prime_UTR | 55295930 | 55296141 | 55295930 | ID=Msa1296240-mRNA-1:five_prime_utr;Parent=Msa1296240-mRNA-1 |
| chr8_3 | CDS | 55295836 | 55295929 | 55295836 | ID=Msa1296240-mRNA-1:cds;Parent=Msa1296240-mRNA-1 |
| chr8_3 | CDS | 55295575 | 55295683 | 55295575 | ID=Msa1296240-mRNA-1:cds;Parent=Msa1296240-mRNA-1 |
| chr8_3 | CDS | 55295300 | 55295495 | 55295300 | ID=Msa1296240-mRNA-1:cds;Parent=Msa1296240-mRNA-1 |
| chr8_3 | CDS | 55294925 | 55295058 | 55294925 | ID=Msa1296240-mRNA-1:cds;Parent=Msa1296240-mRNA-1 |
| chr8_3 | CDS | 55294153 | 55294441 | 55294153 | ID=Msa1296240-mRNA-1:cds;Parent=Msa1296240-mRNA-1 |
| chr8_3 | CDS | 55293853 | 55293959 | 55293853 | ID=Msa1296240-mRNA-1:cds;Parent=Msa1296240-mRNA-1 |
| chr8_3 | CDS | 55293601 | 55293772 | 55293601 | ID=Msa1296240-mRNA-1:cds;Parent=Msa1296240-mRNA-1 |
| chr8_3 | CDS | 55292428 | 55292876 | 55292428 | ID=Msa1296240-mRNA-1:cds;Parent=Msa1296240-mRNA-1 |
| chr8_3 | CDS | 55291789 | 55292032 | 55291789 | ID=Msa1296240-mRNA-1:cds;Parent=Msa1296240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
