Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0994360 | Q43785.1 | 98.876 | 356 | 4 | 0 | 1 | 356 | 1 | 356 | 0.0 | 726 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0994360 | sp|Q43785|GLNA3_MEDSA | 98.876 | 356 | 4 | 0 | 1 | 356 | 1 | 356 | 0.0 | 726 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0994360 | O04998 | 98.596 | 356 | 5 | 0 | 1 | 356 | 1 | 356 | 0.0 | 723 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021400 | Msa0994360 | 0.828890 | 6.990009e-55 | -8.615850e-47 |
| Msa0026780 | Msa0994360 | 0.800799 | 1.216352e-48 | -8.615850e-47 |
| Msa0064960 | Msa0994360 | 0.819478 | 1.137492e-52 | -8.615850e-47 |
| Msa0101530 | Msa0994360 | 0.803294 | 3.733415e-49 | -8.615850e-47 |
| Msa0110240 | Msa0994360 | 0.861163 | 1.243975e-63 | -8.615850e-47 |
| Msa0120860 | Msa0994360 | 0.824903 | 6.272735e-54 | -8.615850e-47 |
| Msa0137760 | Msa0994360 | 0.801721 | 7.878422e-49 | -8.615850e-47 |
| Msa0156530 | Msa0994360 | 0.826242 | 3.021341e-54 | -8.615850e-47 |
| Msa0186400 | Msa0994360 | -0.802562 | 5.289161e-49 | -8.615850e-47 |
| Msa0238140 | Msa0994360 | 0.808412 | 3.136444e-50 | -8.615850e-47 |
| Msa0384590 | Msa0994360 | 0.819251 | 1.281199e-52 | -8.615850e-47 |
| Msa0434660 | Msa0994360 | 0.804069 | 2.578729e-49 | -8.615850e-47 |
| Msa0994360 | Msa1026970 | 0.825413 | 4.752273e-54 | -8.615850e-47 |
| Msa0994360 | Msa1093190 | -0.803897 | 2.799111e-49 | -8.615850e-47 |
| Msa0994360 | Msa1111900 | 0.804105 | 2.533740e-49 | -8.615850e-47 |
| Msa0994360 | Msa1133760 | 0.809813 | 1.571614e-50 | -8.615850e-47 |
| Msa0994360 | Msa1146980 | 0.841830 | 3.745650e-58 | -8.615850e-47 |
| Msa0994360 | Msa1154310 | 0.824113 | 9.623338e-54 | -8.615850e-47 |
| Msa0994360 | Msa1184680 | 0.811450 | 6.957932e-51 | -8.615850e-47 |
| Msa0994360 | Msa1197720 | 0.817729 | 2.835113e-52 | -8.615850e-47 |
| Msa0994360 | Msa1254910 | 0.823009 | 1.744821e-53 | -8.615850e-47 |
| Msa0994360 | Msa1331570 | -0.800421 | 1.452462e-48 | -8.615850e-47 |
| Msa0994360 | Msa1375640 | 0.802763 | 4.808318e-49 | -8.615850e-47 |
| Msa0994360 | Msa1417760 | 0.800444 | 1.437019e-48 | -8.615850e-47 |
| Msa0994360 | Msa1434300 | 0.843265 | 1.557949e-58 | -8.615850e-47 |
| Msa0994360 | Msa1434700 | 0.800405 | 1.463459e-48 | -8.615850e-47 |
| Msa0994360 | Msa1462780 | 0.810183 | 1.308009e-50 | -8.615850e-47 |
| Msa0358470 | Msa0994360 | 0.818279 | 2.129323e-52 | -8.615850e-47 |
| Msa0514540 | Msa0994360 | 0.800186 | 1.621982e-48 | -8.615850e-47 |
| Msa0522540 | Msa0994360 | 0.816209 | 6.223405e-52 | -8.615850e-47 |
| Msa0548420 | Msa0994360 | 0.800613 | 1.327823e-48 | -8.615850e-47 |
| Msa0575950 | Msa0994360 | 0.818160 | 2.266222e-52 | -8.615850e-47 |
| Msa0921860 | Msa0994360 | 0.906222 | 1.868128e-80 | -8.615850e-47 |
| Msa0947420 | Msa0994360 | 0.800150 | 1.649417e-48 | -8.615850e-47 |
| Msa0958830 | Msa0994360 | 0.837098 | 6.351428e-57 | -8.615850e-47 |
| Msa0964020 | Msa0994360 | 0.814702 | 1.346419e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0994360 | MtrunA17_Chr6g0479141 | 98.596 | 356 | 5 | 0 | 1 | 356 | 1 | 356 | 0.0 | 723 |
| Msa0994360 | MtrunA17_Chr3g0110261 | 89.607 | 356 | 37 | 0 | 1 | 356 | 1 | 356 | 0.0 | 676 |
| Msa0994360 | MtrunA17_Chr5g0434471 | 85.070 | 355 | 53 | 0 | 2 | 356 | 3 | 357 | 0.0 | 644 |
| Msa0994360 | MtrunA17_Chr2g0287211 | 78.652 | 356 | 76 | 0 | 1 | 356 | 57 | 412 | 0.0 | 612 |
| Msa0994360 | MtrunA17_Chr2g0287181 | 75.000 | 356 | 89 | 0 | 1 | 356 | 57 | 412 | 0.0 | 592 |
| Msa0994360 | MtrunA17_Chr8g0364341 | 72.727 | 55 | 15 | 0 | 252 | 306 | 9 | 63 | 1.90e-22 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0994360 | AT1G66200.1 | 90.449 | 356 | 34 | 0 | 1 | 356 | 1 | 356 | 0.0 | 677 |
| Msa0994360 | AT5G37600.1 | 88.764 | 356 | 40 | 0 | 1 | 356 | 1 | 356 | 0.0 | 675 |
| Msa0994360 | AT1G66200.3 | 88.219 | 365 | 34 | 1 | 1 | 356 | 1 | 365 | 0.0 | 670 |
| Msa0994360 | AT3G17820.1 | 86.119 | 353 | 49 | 0 | 1 | 353 | 1 | 353 | 0.0 | 657 |
| Msa0994360 | AT5G16570.1 | 84.831 | 356 | 54 | 0 | 1 | 356 | 1 | 356 | 0.0 | 652 |
| Msa0994360 | AT1G48470.1 | 81.953 | 338 | 61 | 0 | 16 | 353 | 16 | 353 | 0.0 | 607 |
| Msa0994360 | AT5G35630.3 | 78.470 | 353 | 76 | 0 | 4 | 356 | 62 | 414 | 0.0 | 604 |
| Msa0994360 | AT5G35630.2 | 78.470 | 353 | 76 | 0 | 4 | 356 | 62 | 414 | 0.0 | 604 |
| Msa0994360 | AT5G35630.1 | 78.470 | 353 | 76 | 0 | 4 | 356 | 62 | 414 | 0.0 | 604 |
| Msa0994360 | AT1G66200.2 | 90.079 | 252 | 25 | 0 | 1 | 252 | 1 | 252 | 3.86e-172 | 480 |
| Msa0994360 | AT5G16570.2 | 81.667 | 240 | 44 | 0 | 1 | 240 | 1 | 240 | 1.43e-152 | 429 |
Find 112 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCATTTAGTCCATGTATT+TGG | 0.173157 | 6_4:+69074126 | Msa0994360:three_prime_UTR |
| ATTCAATTTGTTGCTTCTTT+AGG | 0.176182 | 6_4:+69074241 | Msa0994360:three_prime_UTR |
| CAACCACTTGTCTTCGGATT+TGG | 0.206179 | 6_4:+69073998 | Msa0994360:three_prime_UTR |
| TTCAATTTGTTGCTTCTTTA+GGG | 0.210528 | 6_4:+69074242 | Msa0994360:three_prime_UTR |
| ATATTGTTGCCTTGTCTAAA+TGG | 0.224649 | 6_4:-69070517 | None:intergenic |
| ACCCTTCAAAACTTCCTAAA+TGG | 0.243549 | 6_4:+69070290 | Msa0994360:CDS |
| GATCCATCATAGTTCCATTT+AGG | 0.252717 | 6_4:-69070304 | None:intergenic |
| TTACCCTGGCTTTGCTTCTA+AGG | 0.260345 | 6_4:-69070122 | None:intergenic |
| TGGCCTATTGGTGGCTTTCC+AGG | 0.261567 | 6_4:+69071155 | Msa0994360:CDS |
| TTTCTGCTGGAGATGAAATA+TGG | 0.262725 | 6_4:+69072411 | Msa0994360:CDS |
| ATCAGGGTGACTGAAAATTT+TGG | 0.286945 | 6_4:-69070750 | None:intergenic |
| TTGAATAAACAGACTCTTCC+TGG | 0.301044 | 6_4:+69070256 | Msa0994360:intron |
| TATTGCAGAAAGATACTAAT+TGG | 0.302912 | 6_4:+69071123 | Msa0994360:CDS |
| GTTGGGAGTGGTTCACCAGC+TGG | 0.311962 | 6_4:-69070707 | None:intergenic |
| AAGGAGCACATTGCTGCTTA+TGG | 0.321020 | 6_4:+69073277 | Msa0994360:CDS |
| AAAGGCATTCTAACCGGAAT+TGG | 0.322565 | 6_4:-69072619 | None:intergenic |
| CATTGTGCCTCTTGTTTGTT+GGG | 0.328802 | 6_4:-69070724 | None:intergenic |
| GCACCAATCCCACAATAATA+TGG | 0.333506 | 6_4:-69071535 | None:intergenic |
| GACTTCATGGTTTCCATAGA+AGG | 0.338574 | 6_4:-69073974 | None:intergenic |
| TTGCTGAAACCACCCTTCTA+TGG | 0.342660 | 6_4:+69073961 | Msa0994360:CDS |
| ATTCTAACCGGAATTGGCTT+AGG | 0.362405 | 6_4:-69072613 | None:intergenic |
| GACAAGTGGTTGTGACTTCA+TGG | 0.364514 | 6_4:-69073987 | None:intergenic |
| GCATTGTGCCTCTTGTTTGT+TGG | 0.366714 | 6_4:-69070725 | None:intergenic |
| ATTGTTGTTCCTAGGGTGAT+TGG | 0.370986 | 6_4:+69072772 | Msa0994360:intron |
| CCTTCTGTTGGTATTTCTGC+TGG | 0.371824 | 6_4:+69072398 | Msa0994360:CDS |
| TATGCTGGCATTAACATTAG+TGG | 0.389669 | 6_4:+69071610 | Msa0994360:CDS |
| TTGGGAGTGGTTCACCAGCT+GGG | 0.397770 | 6_4:-69070706 | None:intergenic |
| CAAACCGTGGTGCCTCAGTT+AGG | 0.400634 | 6_4:+69073847 | Msa0994360:CDS |
| ATATACAGGGTTGGTGGATC+TGG | 0.401271 | 6_4:+69070093 | Msa0994360:intron |
| CGGAGGATTCTGAGAGATTG+AGG | 0.404950 | 6_4:-69069541 | None:intergenic |
| TGCCTCTTGTTTGTTGGGAG+TGG | 0.442023 | 6_4:-69070719 | None:intergenic |
| AACAGGGTCCATATTATTGT+GGG | 0.442983 | 6_4:+69071527 | Msa0994360:intron |
| AAAATTCATACTTGTGGTCC+TGG | 0.445805 | 6_4:-69071173 | None:intergenic |
| ATCATGGAAGTGACCACATA+AGG | 0.457721 | 6_4:-69073939 | None:intergenic |
| CTTCCTAAATGGAACTATGA+TGG | 0.457898 | 6_4:+69070301 | Msa0994360:CDS |
| TACCAACAGAAGGGCCAACT+TGG | 0.457942 | 6_4:-69072388 | None:intergenic |
| CTCTGTGCTTAAAGACCACT+TGG | 0.460168 | 6_4:-69074106 | None:intergenic |
| TACAAAGCTTGTCTTTATGC+TGG | 0.462426 | 6_4:+69071595 | Msa0994360:CDS |
| CCACTAGGATGGCCTATTGG+TGG | 0.464713 | 6_4:+69071146 | Msa0994360:CDS |
| ATTTGACCCTAAGCCAATTC+CGG | 0.465261 | 6_4:+69072606 | Msa0994360:CDS |
| AAGTCACAACCACTTGTCTT+CGG | 0.465382 | 6_4:+69073992 | Msa0994360:exon |
| GGTCCATATTATTGTGGGAT+TGG | 0.467497 | 6_4:+69071532 | Msa0994360:CDS |
| AGATTATTGCTGAATACATA+TGG | 0.469751 | 6_4:+69069567 | Msa0994360:CDS |
| TTCTAACATGGATCCTTATG+TGG | 0.473688 | 6_4:+69073926 | Msa0994360:CDS |
| TCCATCCTCTCTCATTGACT+TGG | 0.478188 | 6_4:-69073206 | None:intergenic |
| ATCAATGGAGAGGTTATGCC+TGG | 0.479715 | 6_4:+69071634 | Msa0994360:CDS |
| TTCCAAGTTGGCCCTTCTGT+TGG | 0.480743 | 6_4:+69072386 | Msa0994360:CDS |
| GGTCCTGGAAAGCCACCAAT+AGG | 0.482434 | 6_4:-69071158 | None:intergenic |
| GGAAATGAGAGACGTCTCAC+TGG | 0.484871 | 6_4:+69073304 | Msa0994360:CDS |
| TGGCCACTAGGATGGCCTAT+TGG | 0.485125 | 6_4:+69071143 | Msa0994360:CDS |
| GGTACCTCAGCAGAAACATC+AGG | 0.489784 | 6_4:-69070767 | None:intergenic |
| AAACCGTGGTGCCTCAGTTA+GGG | 0.490188 | 6_4:+69073848 | Msa0994360:CDS |
| AAAGCTTAGATTGAGGCATA+AGG | 0.491860 | 6_4:+69073258 | Msa0994360:CDS |
| TTCTAACCGGAATTGGCTTA+GGG | 0.495438 | 6_4:-69072612 | None:intergenic |
| TGGACCTTAGAAGCAAAGCC+AGG | 0.496641 | 6_4:+69070118 | Msa0994360:CDS |
| AAGGGTGGTTTCAGCAATCA+TGG | 0.497015 | 6_4:-69073955 | None:intergenic |
| TAACAGGGTCCATATTATTG+TGG | 0.497501 | 6_4:+69071526 | Msa0994360:intron |
| CAGAGGATCACAGAGATAGC+TGG | 0.499269 | 6_4:+69072571 | Msa0994360:intron |
| CAGAAGGCCTTCTTCTAACA+TGG | 0.500908 | 6_4:+69073914 | Msa0994360:CDS |
| ATTAACATTAGTGGCATCAA+TGG | 0.503694 | 6_4:+69071619 | Msa0994360:CDS |
| TTCTGCTGGAGATGAAATAT+GGG | 0.507050 | 6_4:+69072412 | Msa0994360:CDS |
| GAAGGGTCACTCACTGGACC+AGG | 0.508051 | 6_4:-69070274 | None:intergenic |
| CAGGGTTGGTGGATCTGGTA+TGG | 0.514346 | 6_4:+69070098 | Msa0994360:intron |
| GTTATTATATACAGGGTTGG+TGG | 0.514357 | 6_4:+69070087 | Msa0994360:intron |
| TTAAGAACTGACCCAAGAAA+AGG | 0.521962 | 6_4:-69073353 | None:intergenic |
| CACATTGCTGCTTATGGAGA+AGG | 0.524445 | 6_4:+69073283 | Msa0994360:CDS |
| TGGAGAGGTTATGCCTGGCC+AGG | 0.526189 | 6_4:+69071639 | Msa0994360:CDS |
| TGTTCCTAGGGTGATTGGAA+TGG | 0.535087 | 6_4:+69072777 | Msa0994360:intron |
| TGGGAGTGGTTCACCAGCTG+GGG | 0.539124 | 6_4:-69070705 | None:intergenic |
| ATACTAATTGGCCACTAGGA+TGG | 0.540230 | 6_4:+69071135 | Msa0994360:CDS |
| TCAAGCACAAATCAAGCTCC+AGG | 0.541387 | 6_4:+69070325 | Msa0994360:CDS |
| ACCAAGTCAATGAGAGAGGA+TGG | 0.547803 | 6_4:+69073205 | Msa0994360:CDS |
| TAAGGATCCATGTTAGAAGA+AGG | 0.549301 | 6_4:-69073921 | None:intergenic |
| TTTGTTAAGGTCAAAAGAGA+GGG | 0.550865 | 6_4:-69069406 | None:intergenic |
| TGTGATGTTTACACCCCAGC+TGG | 0.552836 | 6_4:+69070692 | Msa0994360:CDS |
| ATAACTTCACTATCTTGTCC+TGG | 0.553036 | 6_4:-69070343 | None:intergenic |
| CTGGTGCTCACACAAACTAT+AGG | 0.555909 | 6_4:+69072802 | Msa0994360:CDS |
| ATTATTGTCATCCAAATACA+TGG | 0.561165 | 6_4:-69074137 | None:intergenic |
| TAGGGTGATTGGAATGGAGC+TGG | 0.561648 | 6_4:+69072783 | Msa0994360:intron |
| ACTTCATGGTTTCCATAGAA+GGG | 0.562577 | 6_4:-69073973 | None:intergenic |
| CGTGGTGCCTCAGTTAGGGT+TGG | 0.568100 | 6_4:+69073852 | Msa0994360:CDS |
| AAAGATACTAATTGGCCACT+AGG | 0.568445 | 6_4:+69071131 | Msa0994360:CDS |
| GGATCCTTGAAAATAGCTTG+TGG | 0.575621 | 6_4:-69070496 | None:intergenic |
| ATTGGTGCTGATAAAGCATA+TGG | 0.577793 | 6_4:+69071550 | Msa0994360:CDS |
| AAGGATACTTTGAGGACAGA+AGG | 0.579138 | 6_4:+69073898 | Msa0994360:CDS |
| ATTAGTAGTAATTGTCCAAG+TGG | 0.579620 | 6_4:+69074091 | Msa0994360:three_prime_UTR |
| AGATGGCAAAGGATACTTTG+AGG | 0.585585 | 6_4:+69073890 | Msa0994360:CDS |
| ATGTTTCTGCTGAGGTACCA+TGG | 0.590026 | 6_4:+69070771 | Msa0994360:CDS |
| GACATGATGATGAATAGTGA+AGG | 0.593951 | 6_4:-69069497 | None:intergenic |
| CCATTGAAAAGCTTAGATTG+AGG | 0.596334 | 6_4:+69073251 | Msa0994360:CDS |
| TTATAGTGGGAGTTCCAAGT+TGG | 0.601131 | 6_4:+69072374 | Msa0994360:intron |
| TTCAAGGATCCATTTAGACA+AGG | 0.602322 | 6_4:+69070508 | Msa0994360:CDS |
| TCACCCTGATGTTTCTGCTG+AGG | 0.604016 | 6_4:+69070763 | Msa0994360:CDS |
| CCAGCAGAAATACCAACAGA+AGG | 0.605255 | 6_4:-69072398 | None:intergenic |
| GATCACAGAGATAGCTGGAG+TGG | 0.613338 | 6_4:+69072576 | Msa0994360:CDS |
| GGCTGCTCGTTACATTCTAG+AGG | 0.619452 | 6_4:+69072433 | Msa0994360:CDS |
| CATTAGTGGCATCAATGGAG+AGG | 0.622524 | 6_4:+69071624 | Msa0994360:CDS |
| AGGCTATGAAATCATCAAGA+AGG | 0.629772 | 6_4:+69073228 | Msa0994360:CDS |
| TCATGGTTTCCATAGAAGGG+TGG | 0.631294 | 6_4:-69073970 | None:intergenic |
| AACCACTCCCAACAAACAAG+AGG | 0.633508 | 6_4:+69070717 | Msa0994360:CDS |
| TAATAGACAAATAGCTACAG+AGG | 0.634273 | 6_4:-69069442 | None:intergenic |
| CAGCACCAAGTCAATGAGAG+AGG | 0.638927 | 6_4:+69073201 | Msa0994360:intron |
| CAGCAGAAATACCAACAGAA+GGG | 0.642583 | 6_4:-69072397 | None:intergenic |
| GGTCCAAATCCGAAGACAAG+TGG | 0.658443 | 6_4:-69074001 | None:intergenic |
| ATTGAACACATAATGTGATG+TGG | 0.664215 | 6_4:-69074022 | None:intergenic |
| GGACCTTAGAAGCAAAGCCA+GGG | 0.664228 | 6_4:+69070119 | Msa0994360:CDS |
| CAACCCTAACTGAGGCACCA+CGG | 0.665899 | 6_4:-69073851 | None:intergenic |
| GTACCTCAGCAGAAACATCA+GGG | 0.667939 | 6_4:-69070766 | None:intergenic |
| GTCTCTTCCAACCCTAACTG+AGG | 0.685094 | 6_4:-69073859 | None:intergenic |
| AAGTCAATGAGAGAGGATGG+AGG | 0.709816 | 6_4:+69073208 | Msa0994360:CDS |
| CCACCAATAGGCCATCCTAG+TGG | 0.722635 | 6_4:-69071146 | None:intergenic |
| ATGTAGGGTGTGGCAAACCG+TGG | 0.726798 | 6_4:+69073834 | Msa0994360:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTACATTTTTTTTTTTA+TGG | - | chr6_4:69069700-69069719 | None:intergenic | 10.0% |
| !!! | TTTTATATGTTATTATATAC+AGG | + | chr6_4:69070079-69070098 | Msa0994360:intron | 10.0% |
| !! | TTTATATGTTATTATATACA+GGG | + | chr6_4:69070080-69070099 | Msa0994360:intron | 10.0% |
| !!! | ATTCAAGAAATATTAATTTT+TGG | - | chr6_4:69071067-69071086 | None:intergenic | 10.0% |
| !!! | TATATATTTTTGTTTTTAAC+AGG | + | chr6_4:69071510-69071529 | Msa0994360:intron | 10.0% |
| !!! | ATATATTTTTGTTTTTAACA+GGG | + | chr6_4:69071511-69071530 | Msa0994360:intron | 10.0% |
| !!! | ATTATATAACAATTTTATAG+TGG | + | chr6_4:69072360-69072379 | Msa0994360:intron | 10.0% |
| !!! | TTATATAACAATTTTATAGT+GGG | + | chr6_4:69072361-69072380 | Msa0994360:intron | 10.0% |
| !!! | TTCTAAATTTTTTATTTTGA+AGG | + | chr6_4:69072482-69072501 | Msa0994360:intron | 10.0% |
| !!! | TCTAAATTTTTTATTTTGAA+GGG | + | chr6_4:69072483-69072502 | Msa0994360:intron | 10.0% |
| !! | TATATATTATATTATTACAG+AGG | + | chr6_4:69072554-69072573 | Msa0994360:intron | 10.0% |
| !!! | AATTATTTTTTCTAATTCTT+TGG | - | chr6_4:69073460-69073479 | None:intergenic | 10.0% |
| !!! | ATTCATCTTTTTAAAAATTA+AGG | + | chr6_4:69073687-69073706 | Msa0994360:intron | 10.0% |
| !!! | TAATTTTATCATTAATAACA+TGG | + | chr6_4:69074156-69074175 | Msa0994360:three_prime_UTR | 10.0% |
| !!! | ATTCTTGGTATATTTTAAAA+GGG | + | chr6_4:69069745-69069764 | Msa0994360:intron | 15.0% |
| !!! | TTTATTGTATAGTTTTCTTA+TGG | + | chr6_4:69069879-69069898 | Msa0994360:intron | 15.0% |
| !! | TTTAATTGTATCAAAACAAA+GGG | - | chr6_4:69069918-69069937 | None:intergenic | 15.0% |
| !! | ATTTGTATTCATTCATTTAT+TGG | + | chr6_4:69070216-69070235 | Msa0994360:intron | 15.0% |
| !!! | TCATTTATTGGTTTTTTTTT+TGG | + | chr6_4:69070228-69070247 | Msa0994360:intron | 15.0% |
| !!! | TTTTTCAATTTTGACATAAT+TGG | + | chr6_4:69070557-69070576 | Msa0994360:intron | 15.0% |
| !!! | AATATACATTTTGATTAACT+AGG | - | chr6_4:69070624-69070643 | None:intergenic | 15.0% |
| !!! | TATTTTTTTCAAATTACTAC+CGG | - | chr6_4:69070941-69070960 | None:intergenic | 15.0% |
| !! | GTTACAAAAACAAAAATTTA+AGG | - | chr6_4:69071377-69071396 | None:intergenic | 15.0% |
| !!! | TTTATTTTCCAATTTTTCTA+AGG | + | chr6_4:69071469-69071488 | Msa0994360:intron | 15.0% |
| !!! | GTATTTTTTATTACTTTCTT+TGG | + | chr6_4:69072310-69072329 | Msa0994360:intron | 15.0% |
| !!! | AACATTTTTATTGATATTCA+TGG | - | chr6_4:69072517-69072536 | None:intergenic | 15.0% |
| !!! | ACATTTTAATTCTCTTAATT+AGG | - | chr6_4:69073624-69073643 | None:intergenic | 15.0% |
| !! | ATGTTATTCATTATGATTCT+TGG | + | chr6_4:69069730-69069749 | Msa0994360:intron | 20.0% |
| !!! | GATTCTTGGTATATTTTAAA+AGG | + | chr6_4:69069744-69069763 | Msa0994360:intron | 20.0% |
| !! | GTTTAATTGTATCAAAACAA+AGG | - | chr6_4:69069919-69069938 | None:intergenic | 20.0% |
| !! | TATTACAAATAAACCATAGA+GGG | - | chr6_4:69069941-69069960 | None:intergenic | 20.0% |
| !! | ATATTACAAATAAACCATAG+AGG | - | chr6_4:69069942-69069961 | None:intergenic | 20.0% |
| !! | AATAGATCAACAAAAGAAAA+GGG | - | chr6_4:69070004-69070023 | None:intergenic | 20.0% |
| !! | TAATAGATCAACAAAAGAAA+AGG | - | chr6_4:69070005-69070024 | None:intergenic | 20.0% |
| !! | AATAATCACAACAAACAAAA+AGG | - | chr6_4:69070462-69070481 | None:intergenic | 20.0% |
| !! | GAATTTGAAAGGATAATAAA+TGG | - | chr6_4:69070837-69070856 | None:intergenic | 20.0% |
| !!! | AAATTCTTAAAACCCTTTTT+TGG | + | chr6_4:69070851-69070870 | Msa0994360:intron | 20.0% |
| !! | CATAAACATAATCCAAAAAA+GGG | - | chr6_4:69070866-69070885 | None:intergenic | 20.0% |
| !! | ACATAAACATAATCCAAAAA+AGG | - | chr6_4:69070867-69070886 | None:intergenic | 20.0% |
| !! | TATTTCTTGAATGTATTAAC+AGG | + | chr6_4:69071075-69071094 | Msa0994360:intron | 20.0% |
| !! | AAAATAAAGAAGGAAAAAGA+AGG | - | chr6_4:69071215-69071234 | None:intergenic | 20.0% |
| !! | CAAAACAAGATAAACATAAA+GGG | - | chr6_4:69071243-69071262 | None:intergenic | 20.0% |
| !!! | GGTTGAAAAATTTGATAATT+GGG | - | chr6_4:69071273-69071292 | None:intergenic | 20.0% |
| !!! | TGGTTGAAAAATTTGATAAT+TGG | - | chr6_4:69071274-69071293 | None:intergenic | 20.0% |
| !! | GGAAAATAAAAAGTTATGTA+CGG | - | chr6_4:69071459-69071478 | None:intergenic | 20.0% |
| !!! | AAATATTTTGATGTAATACC+TGG | - | chr6_4:69071660-69071679 | None:intergenic | 20.0% |
| !!! | TACATCAAAATATTTGACTT+TGG | + | chr6_4:69071665-69071684 | Msa0994360:intron | 20.0% |
| !!! | AGATAAATTGTTCATTTTAG+AGG | + | chr6_4:69072006-69072025 | Msa0994360:intron | 20.0% |
| !!! | AAACATTCTAGTCTTTAAAA+TGG | + | chr6_4:69072061-69072080 | Msa0994360:intron | 20.0% |
| !! | CAATTCACATAATAACAAAT+TGG | - | chr6_4:69072150-69072169 | None:intergenic | 20.0% |
| !!! | ATTTGTTATTATGTGAATTG+TGG | + | chr6_4:69072150-69072169 | Msa0994360:intron | 20.0% |
| !!! | AAGACTAATTTGTTTTTTGA+AGG | + | chr6_4:69072185-69072204 | Msa0994360:intron | 20.0% |
| !!! | ATTGTTATTATGTGAATTTG+TGG | + | chr6_4:69072219-69072238 | Msa0994360:intron | 20.0% |
| !! | ATCAACTATTACAATTTCAA+GGG | + | chr6_4:69072252-69072271 | Msa0994360:intron | 20.0% |
| !!! | ATTTGTTAAAAACTTATGCA+CGG | + | chr6_4:69072656-69072675 | Msa0994360:intron | 20.0% |
| !! | AGATAATAGTCTTTAACTAT+TGG | + | chr6_4:69073395-69073414 | Msa0994360:intron | 20.0% |
| !!! | AATTGAAATTTTCCTCATAT+TGG | + | chr6_4:69073476-69073495 | Msa0994360:intron | 20.0% |
| !!! | TGATTTTTCAATAACAAACT+AGG | + | chr6_4:69073518-69073537 | Msa0994360:intron | 20.0% |
| !!! | GATTTTTCAATAACAAACTA+GGG | + | chr6_4:69073519-69073538 | Msa0994360:intron | 20.0% |
| !! | AAGAGAATTAAAATGTTGAA+AGG | + | chr6_4:69073628-69073647 | Msa0994360:intron | 20.0% |
| !!! | TATGTCCTCATTTTTTTTTT+TGG | - | chr6_4:69073668-69073687 | None:intergenic | 20.0% |
| !!! | TTTTACTCTCAATAATTTCA+TGG | + | chr6_4:69074190-69074209 | Msa0994360:three_prime_UTR | 20.0% |
| !!! | AATCTCTAGCTTTTTTGTTA+AGG | - | chr6_4:69069422-69069441 | None:intergenic | 25.0% |
| !! | GTATTCAGCAATAATCTTTT+CGG | - | chr6_4:69069564-69069583 | None:intergenic | 25.0% |
| ! | AGATTATTGCTGAATACATA+TGG | + | chr6_4:69069567-69069586 | Msa0994360:CDS | 25.0% |
| !! | ATACATATGGTAAGGTTTTA+AGG | + | chr6_4:69069580-69069599 | Msa0994360:intron | 25.0% |
| ! | TAAATAAACCATAGGTTTAG+AGG | - | chr6_4:69069832-69069851 | None:intergenic | 25.0% |
| ! | CTAAACCTATGGTTTATTTA+TGG | + | chr6_4:69069832-69069851 | Msa0994360:intron | 25.0% |
| ! | TTGATCCATAAATAAACCAT+AGG | - | chr6_4:69069840-69069859 | None:intergenic | 25.0% |
| ! | TGTTGATCTATTATGTTATG+TGG | + | chr6_4:69070012-69070031 | Msa0994360:intron | 25.0% |
| ! | TATGTTATTATATACAGGGT+TGG | + | chr6_4:69070084-69070103 | Msa0994360:intron | 25.0% |
| ! | TTAAGAAATAACAATTACCC+TGG | - | chr6_4:69070139-69070158 | None:intergenic | 25.0% |
| !!! | ATACATTTTGATTAACTAGG+AGG | - | chr6_4:69070621-69070640 | None:intergenic | 25.0% |
| ! | TTGTGGGAAAAAAAATATTC+AGG | + | chr6_4:69070664-69070683 | Msa0994360:intron | 25.0% |
| ! | TAAAACCTAGGAATCAAAAT+AGG | - | chr6_4:69070814-69070833 | None:intergenic | 25.0% |
| ! | GATAATAAATGGTAAAACCT+AGG | - | chr6_4:69070826-69070845 | None:intergenic | 25.0% |
| !!! | AAGGGTTTTAAGAATTTGAA+AGG | - | chr6_4:69070848-69070867 | None:intergenic | 25.0% |
| ! | CATATGACAAATATGTTACA+TGG | - | chr6_4:69071018-69071037 | None:intergenic | 25.0% |
| ! | TATTGCAGAAAGATACTAAT+TGG | + | chr6_4:69071123-69071142 | Msa0994360:CDS | 25.0% |
| ! | AAGGGAACAAAAAATAAAGA+AGG | - | chr6_4:69071225-69071244 | None:intergenic | 25.0% |
| ! | CCAAAACAAGATAAACATAA+AGG | - | chr6_4:69071244-69071263 | None:intergenic | 25.0% |
| !!! | CCTTTATGTTTATCTTGTTT+TGG | + | chr6_4:69071241-69071260 | Msa0994360:intron | 25.0% |
| ! | AAAAACATGCATCATAGATT+TGG | - | chr6_4:69071294-69071313 | None:intergenic | 25.0% |
| ! | AATAAGAAAAACCATTTCCT+TGG | - | chr6_4:69071320-69071339 | None:intergenic | 25.0% |
| ! | CAAAAGAACCTTAGAAAAAT+TGG | - | chr6_4:69071480-69071499 | None:intergenic | 25.0% |
| !! | TAAGAAATATGTTGATAGAG+AGG | + | chr6_4:69072092-69072111 | Msa0994360:intron | 25.0% |
| ! | GATCAACTATTACAATTTCA+AGG | + | chr6_4:69072251-69072270 | Msa0994360:intron | 25.0% |
| ! | CGCACAAAAATACTAAATAA+TGG | - | chr6_4:69072965-69072984 | None:intergenic | 25.0% |
| ! | ATTCAAATCAGTTGAAATCA+TGG | - | chr6_4:69073013-69073032 | None:intergenic | 25.0% |
| !! | TCATTTTCTTATTCTCTCAA+TGG | + | chr6_4:69073171-69073190 | Msa0994360:intron | 25.0% |
| !! | CATTTTCTTATTCTCTCAAT+GGG | + | chr6_4:69073172-69073191 | Msa0994360:intron | 25.0% |
| ! | TTGTACTTAATACCAATATG+AGG | - | chr6_4:69073491-69073510 | None:intergenic | 25.0% |
| !! | CAAAACATACCTTAATGTTT+TGG | + | chr6_4:69073775-69073794 | Msa0994360:intron | 25.0% |
| !!! | ATACCTTAATGTTTTGGATT+TGG | + | chr6_4:69073781-69073800 | Msa0994360:intron | 25.0% |
| ! | ATACCAAATCCAAAACATTA+AGG | - | chr6_4:69073787-69073806 | None:intergenic | 25.0% |
| ! | ATTATTGTCATCCAAATACA+TGG | - | chr6_4:69074140-69074159 | None:intergenic | 25.0% |
| !!! | ATTCAATTTGTTGCTTCTTT+AGG | + | chr6_4:69074241-69074260 | Msa0994360:three_prime_UTR | 25.0% |
| !!! | TTCAATTTGTTGCTTCTTTA+GGG | + | chr6_4:69074242-69074261 | Msa0994360:three_prime_UTR | 25.0% |
| TTTGTTAAGGTCAAAAGAGA+GGG | - | chr6_4:69069409-69069428 | None:intergenic | 30.0% | |
| ! | TTTTGTTAAGGTCAAAAGAG+AGG | - | chr6_4:69069410-69069429 | None:intergenic | 30.0% |
| TAATAGACAAATAGCTACAG+AGG | - | chr6_4:69069445-69069464 | None:intergenic | 30.0% | |
| ATTGCTGAATACATATGGTA+AGG | + | chr6_4:69069572-69069591 | Msa0994360:intron | 30.0% | |
| ! | AGGATACTCTGTTTTATAAC+AGG | + | chr6_4:69069600-69069619 | Msa0994360:intron | 30.0% |
| ! | GGATACTCTGTTTTATAACA+GGG | + | chr6_4:69069601-69069620 | Msa0994360:intron | 30.0% |
| ! | GATACTCTGTTTTATAACAG+GGG | + | chr6_4:69069602-69069621 | Msa0994360:intron | 30.0% |
| ! | GTATCAAAACAAAGGGTTTT+AGG | - | chr6_4:69069911-69069930 | None:intergenic | 30.0% |
| TGATACAATTAAACCCTCTA+TGG | + | chr6_4:69069925-69069944 | Msa0994360:intron | 30.0% | |
| ! | CAACAAAAGAAAAGGGTTTT+AGG | - | chr6_4:69069997-69070016 | None:intergenic | 30.0% |
| !!! | TCCATTTAGGAAGTTTTGAA+GGG | - | chr6_4:69070294-69070313 | None:intergenic | 30.0% |
| !! | TTCCATTTAGGAAGTTTTGA+AGG | - | chr6_4:69070295-69070314 | None:intergenic | 30.0% |
| ATATTGTTGCCTTGTCTAAA+TGG | - | chr6_4:69070520-69070539 | None:intergenic | 30.0% | |
| TTTGACAAATGTTCACTTTG+TGG | + | chr6_4:69070647-69070666 | Msa0994360:intron | 30.0% | |
| TTGACAAATGTTCACTTTGT+GGG | + | chr6_4:69070648-69070667 | Msa0994360:intron | 30.0% | |
| CTTGAATGTATTAACAGGTA+TGG | + | chr6_4:69071080-69071099 | Msa0994360:intron | 30.0% | |
| CAAGGAAAAATTCATACTTG+TGG | - | chr6_4:69071182-69071201 | None:intergenic | 30.0% | |
| ATTAACATTAGTGGCATCAA+TGG | + | chr6_4:69071619-69071638 | Msa0994360:CDS | 30.0% | |
| !! | CTTTCTTTGGTTTGTATGTA+AGG | + | chr6_4:69072323-69072342 | Msa0994360:intron | 30.0% |
| !! | AGTTTAAAAGGCATTCTAAC+CGG | - | chr6_4:69072628-69072647 | None:intergenic | 30.0% |
| TTGAAGAGTTGAAAGAGAAA+GGG | + | chr6_4:69072679-69072698 | Msa0994360:intron | 30.0% | |
| ! | TTTGTTACATTGTTGTTCCT+AGG | + | chr6_4:69072764-69072783 | Msa0994360:intron | 30.0% |
| ! | TTGTTACATTGTTGTTCCTA+GGG | + | chr6_4:69072765-69072784 | Msa0994360:intron | 30.0% |
| ATTTACTCGAATTTCGCTAT+CGG | - | chr6_4:69072897-69072916 | None:intergenic | 30.0% | |
| !! | GTATTTTTGTGCGAAAATAG+TGG | + | chr6_4:69072972-69072991 | Msa0994360:intron | 30.0% |
| CGATTGACAATACTATTCAA+TGG | + | chr6_4:69073132-69073151 | Msa0994360:intron | 30.0% | |
| ! | TCAATAACAAACTAGGGTTT+TGG | + | chr6_4:69073525-69073544 | Msa0994360:intron | 30.0% |
| GTGTGCCAAAAAAAAAAATG+AGG | + | chr6_4:69073660-69073679 | Msa0994360:intron | 30.0% | |
| TGTTGTGTTTCAATGTATGT+AGG | + | chr6_4:69073818-69073837 | Msa0994360:intron | 30.0% | |
| GTTGTGTTTCAATGTATGTA+GGG | + | chr6_4:69073819-69073838 | Msa0994360:intron | 30.0% | |
| ATTGAACACATAATGTGATG+TGG | - | chr6_4:69074025-69074044 | None:intergenic | 30.0% | |
| ATTAGTAGTAATTGTCCAAG+TGG | + | chr6_4:69074091-69074110 | Msa0994360:three_prime_UTR | 30.0% | |
| ! | GACATGATGATGAATAGTGA+AGG | - | chr6_4:69069500-69069519 | None:intergenic | 35.0% |
| ! | TTCAGCAATAATCTTTTCGG+AGG | - | chr6_4:69069561-69069580 | None:intergenic | 35.0% |
| TCAATGTTCCTCTAAACCTA+TGG | + | chr6_4:69069821-69069840 | Msa0994360:intron | 35.0% | |
| GTTATTATATACAGGGTTGG+TGG | + | chr6_4:69070087-69070106 | Msa0994360:intron | 35.0% | |
| TTGAATAAACAGACTCTTCC+TGG | + | chr6_4:69070256-69070275 | Msa0994360:intron | 35.0% | |
| ACCCTTCAAAACTTCCTAAA+TGG | + | chr6_4:69070290-69070309 | Msa0994360:CDS | 35.0% | |
| CTTCCTAAATGGAACTATGA+TGG | + | chr6_4:69070301-69070320 | Msa0994360:CDS | 35.0% | |
| GATCCATCATAGTTCCATTT+AGG | - | chr6_4:69070307-69070326 | None:intergenic | 35.0% | |
| ATAACTTCACTATCTTGTCC+TGG | - | chr6_4:69070346-69070365 | None:intergenic | 35.0% | |
| !! | AAGTCCACAAGCTATTTTCA+AGG | + | chr6_4:69070492-69070511 | Msa0994360:intron | 35.0% |
| TTCAAGGATCCATTTAGACA+AGG | + | chr6_4:69070508-69070527 | Msa0994360:CDS | 35.0% | |
| ! | ATCAGGGTGACTGAAAATTT+TGG | - | chr6_4:69070753-69070772 | None:intergenic | 35.0% |
| AGGTTAGGAAATACATACCA+TGG | - | chr6_4:69070791-69070810 | None:intergenic | 35.0% | |
| AGGAATCAAAATAGGAGGTT+AGG | - | chr6_4:69070806-69070825 | None:intergenic | 35.0% | |
| !!! | AACCTCCTATTTTGATTCCT+AGG | + | chr6_4:69070806-69070825 | Msa0994360:intron | 35.0% |
| AACCTAGGAATCAAAATAGG+AGG | - | chr6_4:69070811-69070830 | None:intergenic | 35.0% | |
| AAAGATACTAATTGGCCACT+AGG | + | chr6_4:69071131-69071150 | Msa0994360:CDS | 35.0% | |
| AAAATTCATACTTGTGGTCC+TGG | - | chr6_4:69071176-69071195 | None:intergenic | 35.0% | |
| !! | AAAGAAGGCACTAAATGACA+AGG | - | chr6_4:69071200-69071219 | None:intergenic | 35.0% |
| !! | ATGTTTTTGTGCCAAGGAAA+TGG | + | chr6_4:69071306-69071325 | Msa0994360:intron | 35.0% |
| TAACAGGGTCCATATTATTG+TGG | + | chr6_4:69071526-69071545 | Msa0994360:intron | 35.0% | |
| AACAGGGTCCATATTATTGT+GGG | + | chr6_4:69071527-69071546 | Msa0994360:intron | 35.0% | |
| !! | ATTGGTGCTGATAAAGCATA+TGG | + | chr6_4:69071550-69071569 | Msa0994360:CDS | 35.0% |
| TACAAAGCTTGTCTTTATGC+TGG | + | chr6_4:69071595-69071614 | Msa0994360:CDS | 35.0% | |
| TATGCTGGCATTAACATTAG+TGG | + | chr6_4:69071610-69071629 | Msa0994360:CDS | 35.0% | |
| ATGAGCTATCGATGAAATCA+TGG | - | chr6_4:69071963-69071982 | None:intergenic | 35.0% | |
| TTTCTGCTGGAGATGAAATA+TGG | + | chr6_4:69072411-69072430 | Msa0994360:CDS | 35.0% | |
| TTCTGCTGGAGATGAAATAT+GGG | + | chr6_4:69072412-69072431 | Msa0994360:CDS | 35.0% | |
| GTTGAAGAGTTGAAAGAGAA+AGG | + | chr6_4:69072678-69072697 | Msa0994360:intron | 35.0% | |
| GCGTAGATTGCAAAAAATAG+TGG | - | chr6_4:69073113-69073132 | None:intergenic | 35.0% | |
| AGGCTATGAAATCATCAAGA+AGG | + | chr6_4:69073228-69073247 | Msa0994360:CDS | 35.0% | |
| ! | CCTCAATCTAAGCTTTTCAA+TGG | - | chr6_4:69073254-69073273 | None:intergenic | 35.0% |
| CCATTGAAAAGCTTAGATTG+AGG | + | chr6_4:69073251-69073270 | Msa0994360:CDS | 35.0% | |
| AAAGCTTAGATTGAGGCATA+AGG | + | chr6_4:69073258-69073277 | Msa0994360:CDS | 35.0% | |
| ! | AGACATCAACACCTTTTCTT+GGG | + | chr6_4:69073342-69073361 | Msa0994360:CDS | 35.0% |
| TTAAGAACTGACCCAAGAAA+AGG | - | chr6_4:69073356-69073375 | None:intergenic | 35.0% | |
| TAAGGATCCATGTTAGAAGA+AGG | - | chr6_4:69073924-69073943 | None:intergenic | 35.0% | |
| TTCTAACATGGATCCTTATG+TGG | + | chr6_4:69073926-69073945 | Msa0994360:CDS | 35.0% | |
| ACTTCATGGTTTCCATAGAA+GGG | - | chr6_4:69073976-69073995 | None:intergenic | 35.0% | |
| GAGCATTTAGTCCATGTATT+TGG | + | chr6_4:69074126-69074145 | Msa0994360:three_prime_UTR | 35.0% | |
| GGATCCTTGAAAATAGCTTG+TGG | - | chr6_4:69070499-69070518 | None:intergenic | 40.0% | |
| ! | CATTGTGCCTCTTGTTTGTT+GGG | - | chr6_4:69070727-69070746 | None:intergenic | 40.0% |
| ACGACAATGATCATTGACAC+CGG | + | chr6_4:69070919-69070938 | Msa0994360:intron | 40.0% | |
| ATACTAATTGGCCACTAGGA+TGG | + | chr6_4:69071135-69071154 | Msa0994360:CDS | 40.0% | |
| !! | TGATGCATGTTTTTGTGCCA+AGG | + | chr6_4:69071300-69071319 | Msa0994360:intron | 40.0% |
| GGTCCATATTATTGTGGGAT+TGG | + | chr6_4:69071532-69071551 | Msa0994360:CDS | 40.0% | |
| GCACCAATCCCACAATAATA+TGG | - | chr6_4:69071538-69071557 | None:intergenic | 40.0% | |
| ! | TTTTGATGTAATACCTGGCC+AGG | - | chr6_4:69071655-69071674 | None:intergenic | 40.0% |
| ! | TTATAGTGGGAGTTCCAAGT+TGG | + | chr6_4:69072374-69072393 | Msa0994360:intron | 40.0% |
| CAGCAGAAATACCAACAGAA+GGG | - | chr6_4:69072400-69072419 | None:intergenic | 40.0% | |
| ATTTGACCCTAAGCCAATTC+CGG | + | chr6_4:69072606-69072625 | Msa0994360:CDS | 40.0% | |
| ! | TTCTAACCGGAATTGGCTTA+GGG | - | chr6_4:69072615-69072634 | None:intergenic | 40.0% |
| ! | ATTCTAACCGGAATTGGCTT+AGG | - | chr6_4:69072616-69072635 | None:intergenic | 40.0% |
| !! | AAAGGCATTCTAACCGGAAT+TGG | - | chr6_4:69072622-69072641 | None:intergenic | 40.0% |
| ! | ATTGTTGTTCCTAGGGTGAT+TGG | + | chr6_4:69072772-69072791 | Msa0994360:intron | 40.0% |
| CGCACAAATTGCGAAAATAG+TGG | - | chr6_4:69073039-69073058 | None:intergenic | 40.0% | |
| ! | CAGACATCAACACCTTTTCT+TGG | + | chr6_4:69073341-69073360 | Msa0994360:CDS | 40.0% |
| !! | TAGGGTTTTGGTACGTCTTA+GGG | + | chr6_4:69073537-69073556 | Msa0994360:intron | 40.0% |
| CAAACTTGTGTTACCAAGCT+CGG | - | chr6_4:69073598-69073617 | None:intergenic | 40.0% | |
| GTTTCAATGTATGTAGGGTG+TGG | + | chr6_4:69073824-69073843 | Msa0994360:intron | 40.0% | |
| GGAAGAGACACAGAAAAAGA+TGG | + | chr6_4:69073873-69073892 | Msa0994360:CDS | 40.0% | |
| GACACAGAAAAAGATGGCAA+AGG | + | chr6_4:69073879-69073898 | Msa0994360:CDS | 40.0% | |
| AGATGGCAAAGGATACTTTG+AGG | + | chr6_4:69073890-69073909 | Msa0994360:CDS | 40.0% | |
| ! | AAGGATACTTTGAGGACAGA+AGG | + | chr6_4:69073898-69073917 | Msa0994360:CDS | 40.0% |
| ATCATGGAAGTGACCACATA+AGG | - | chr6_4:69073942-69073961 | None:intergenic | 40.0% | |
| GACTTCATGGTTTCCATAGA+AGG | - | chr6_4:69073977-69073996 | None:intergenic | 40.0% | |
| AAGTCACAACCACTTGTCTT+CGG | + | chr6_4:69073992-69074011 | Msa0994360:exon | 40.0% | |
| !! | ATATACAGGGTTGGTGGATC+TGG | + | chr6_4:69070093-69070112 | Msa0994360:intron | 45.0% |
| !! | TTACCCTGGCTTTGCTTCTA+AGG | - | chr6_4:69070125-69070144 | None:intergenic | 45.0% |
| !!! | AGTTTTGAAGGGTCACTCAC+TGG | - | chr6_4:69070283-69070302 | None:intergenic | 45.0% |
| TCAAGCACAAATCAAGCTCC+AGG | + | chr6_4:69070325-69070344 | Msa0994360:CDS | 45.0% | |
| AACCACTCCCAACAAACAAG+AGG | + | chr6_4:69070717-69070736 | Msa0994360:CDS | 45.0% | |
| ! | GCATTGTGCCTCTTGTTTGT+TGG | - | chr6_4:69070728-69070747 | None:intergenic | 45.0% |
| GTACCTCAGCAGAAACATCA+GGG | - | chr6_4:69070769-69070788 | None:intergenic | 45.0% | |
| ! | ATGTTTCTGCTGAGGTACCA+TGG | + | chr6_4:69070771-69070790 | Msa0994360:CDS | 45.0% |
| CATTAGTGGCATCAATGGAG+AGG | + | chr6_4:69071624-69071643 | Msa0994360:CDS | 45.0% | |
| ATCAATGGAGAGGTTATGCC+TGG | + | chr6_4:69071634-69071653 | Msa0994360:CDS | 45.0% | |
| CCAGCAGAAATACCAACAGA+AGG | - | chr6_4:69072401-69072420 | None:intergenic | 45.0% | |
| ! | CCTTCTGTTGGTATTTCTGC+TGG | + | chr6_4:69072398-69072417 | Msa0994360:CDS | 45.0% |
| TGTTCCTAGGGTGATTGGAA+TGG | + | chr6_4:69072777-69072796 | Msa0994360:intron | 45.0% | |
| CTGGTGCTCACACAAACTAT+AGG | + | chr6_4:69072802-69072821 | Msa0994360:CDS | 45.0% | |
| ACCAAGTCAATGAGAGAGGA+TGG | + | chr6_4:69073205-69073224 | Msa0994360:CDS | 45.0% | |
| ! | TCCATCCTCTCTCATTGACT+TGG | - | chr6_4:69073209-69073228 | None:intergenic | 45.0% |
| AAGTCAATGAGAGAGGATGG+AGG | + | chr6_4:69073208-69073227 | Msa0994360:CDS | 45.0% | |
| ! | AAGGAGCACATTGCTGCTTA+TGG | + | chr6_4:69073277-69073296 | Msa0994360:CDS | 45.0% |
| ! | CACATTGCTGCTTATGGAGA+AGG | + | chr6_4:69073283-69073302 | Msa0994360:CDS | 45.0% |
| !! | CTAGGGTTTTGGTACGTCTT+AGG | + | chr6_4:69073536-69073555 | Msa0994360:intron | 45.0% |
| CAGAAGGCCTTCTTCTAACA+TGG | + | chr6_4:69073914-69073933 | Msa0994360:CDS | 45.0% | |
| AAGGGTGGTTTCAGCAATCA+TGG | - | chr6_4:69073958-69073977 | None:intergenic | 45.0% | |
| TTGCTGAAACCACCCTTCTA+TGG | + | chr6_4:69073961-69073980 | Msa0994360:CDS | 45.0% | |
| TCATGGTTTCCATAGAAGGG+TGG | - | chr6_4:69073973-69073992 | None:intergenic | 45.0% | |
| GACAAGTGGTTGTGACTTCA+TGG | - | chr6_4:69073990-69074009 | None:intergenic | 45.0% | |
| CAACCACTTGTCTTCGGATT+TGG | + | chr6_4:69073998-69074017 | Msa0994360:three_prime_UTR | 45.0% | |
| CTCTGTGCTTAAAGACCACT+TGG | - | chr6_4:69074109-69074128 | None:intergenic | 45.0% | |
| !!! | ATTACATTTTTTTTTTTTTA+TGG | - | chr6_4:69069675-69069694 | None:intergenic | 5.0% |
| !! | TATATTAATTATATTTGAAT+AGG | + | chr6_4:69070589-69070608 | Msa0994360:intron | 5.0% |
| !! | AAATTTAAAAATAGTTTAAA+AGG | - | chr6_4:69072640-69072659 | None:intergenic | 5.0% |
| ! | CGGAGGATTCTGAGAGATTG+AGG | - | chr6_4:69069544-69069563 | None:intergenic | 50.0% |
| TGGACCTTAGAAGCAAAGCC+AGG | + | chr6_4:69070118-69070137 | Msa0994360:CDS | 50.0% | |
| GGACCTTAGAAGCAAAGCCA+GGG | + | chr6_4:69070119-69070138 | Msa0994360:CDS | 50.0% | |
| TGTGATGTTTACACCCCAGC+TGG | + | chr6_4:69070692-69070711 | Msa0994360:CDS | 50.0% | |
| ! | TGCCTCTTGTTTGTTGGGAG+TGG | - | chr6_4:69070722-69070741 | None:intergenic | 50.0% |
| ! | TCACCCTGATGTTTCTGCTG+AGG | + | chr6_4:69070763-69070782 | Msa0994360:CDS | 50.0% |
| GGTACCTCAGCAGAAACATC+AGG | - | chr6_4:69070770-69070789 | None:intergenic | 50.0% | |
| ! | TTCCAAGTTGGCCCTTCTGT+TGG | + | chr6_4:69072386-69072405 | Msa0994360:CDS | 50.0% |
| TACCAACAGAAGGGCCAACT+TGG | - | chr6_4:69072391-69072410 | None:intergenic | 50.0% | |
| GGCTGCTCGTTACATTCTAG+AGG | + | chr6_4:69072433-69072452 | Msa0994360:CDS | 50.0% | |
| CAGAGGATCACAGAGATAGC+TGG | + | chr6_4:69072571-69072590 | Msa0994360:intron | 50.0% | |
| GATCACAGAGATAGCTGGAG+TGG | + | chr6_4:69072576-69072595 | Msa0994360:CDS | 50.0% | |
| AGCTCCATTCCAATCACCCT+AGG | - | chr6_4:69072784-69072803 | None:intergenic | 50.0% | |
| TAGGGTGATTGGAATGGAGC+TGG | + | chr6_4:69072783-69072802 | Msa0994360:intron | 50.0% | |
| !! | CTCTCTCATTGACTTGGTGC+TGG | - | chr6_4:69073203-69073222 | None:intergenic | 50.0% |
| CAGCACCAAGTCAATGAGAG+AGG | + | chr6_4:69073201-69073220 | Msa0994360:intron | 50.0% | |
| GGAAATGAGAGACGTCTCAC+TGG | + | chr6_4:69073304-69073323 | Msa0994360:CDS | 50.0% | |
| CGAGAAGATATTGCCGAGCT+TGG | + | chr6_4:69073582-69073601 | Msa0994360:intron | 50.0% | |
| AAACCGTGGTGCCTCAGTTA+GGG | + | chr6_4:69073848-69073867 | Msa0994360:CDS | 50.0% | |
| GTCTCTTCCAACCCTAACTG+AGG | - | chr6_4:69073862-69073881 | None:intergenic | 50.0% | |
| GGTCCAAATCCGAAGACAAG+TGG | - | chr6_4:69074004-69074023 | None:intergenic | 50.0% | |
| !! | CAGGGTTGGTGGATCTGGTA+TGG | + | chr6_4:69070098-69070117 | Msa0994360:intron | 55.0% |
| TTGGGAGTGGTTCACCAGCT+GGG | - | chr6_4:69070709-69070728 | None:intergenic | 55.0% | |
| TGGCCACTAGGATGGCCTAT+TGG | + | chr6_4:69071143-69071162 | Msa0994360:CDS | 55.0% | |
| CCACCAATAGGCCATCCTAG+TGG | - | chr6_4:69071149-69071168 | None:intergenic | 55.0% | |
| CCACTAGGATGGCCTATTGG+TGG | + | chr6_4:69071146-69071165 | Msa0994360:CDS | 55.0% | |
| ! | TGGCCTATTGGTGGCTTTCC+AGG | + | chr6_4:69071155-69071174 | Msa0994360:CDS | 55.0% |
| GGTCCTGGAAAGCCACCAAT+AGG | - | chr6_4:69071161-69071180 | None:intergenic | 55.0% | |
| ATGTAGGGTGTGGCAAACCG+TGG | + | chr6_4:69073834-69073853 | Msa0994360:intron | 55.0% | |
| CAAACCGTGGTGCCTCAGTT+AGG | + | chr6_4:69073847-69073866 | Msa0994360:CDS | 55.0% | |
| ! | CAACCCTAACTGAGGCACCA+CGG | - | chr6_4:69073854-69073873 | None:intergenic | 55.0% |
| GAAGGGTCACTCACTGGACC+AGG | - | chr6_4:69070277-69070296 | None:intergenic | 60.0% | |
| TGGGAGTGGTTCACCAGCTG+GGG | - | chr6_4:69070708-69070727 | None:intergenic | 60.0% | |
| GTTGGGAGTGGTTCACCAGC+TGG | - | chr6_4:69070710-69070729 | None:intergenic | 60.0% | |
| TGGAGAGGTTATGCCTGGCC+AGG | + | chr6_4:69071639-69071658 | Msa0994360:CDS | 60.0% | |
| CGTGGTGCCTCAGTTAGGGT+TGG | + | chr6_4:69073852-69073871 | Msa0994360:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 69069358 | 69074279 | 69069358 | ID=Msa0994360;Name=Msa0994360 |
| chr6_4 | mRNA | 69069358 | 69074279 | 69069358 | ID=Msa0994360-mRNA-1;Parent=Msa0994360;Name=Msa0994360-mRNA-1;_AED=0.07;_eAED=0.07;_QI=157|1|1|1|1|1|12|287|356 |
| chr6_4 | exon | 69069358 | 69069588 | 69069358 | ID=Msa0994360-mRNA-1:exon:12712;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69070101 | 69070140 | 69070101 | ID=Msa0994360-mRNA-1:exon:12713;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69070268 | 69070371 | 69070268 | ID=Msa0994360-mRNA-1:exon:12714;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69070495 | 69070543 | 69070495 | ID=Msa0994360-mRNA-1:exon:12715;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69070686 | 69070792 | 69070686 | ID=Msa0994360-mRNA-1:exon:12716;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69071097 | 69071184 | 69071097 | ID=Msa0994360-mRNA-1:exon:12717;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69071532 | 69071660 | 69071532 | ID=Msa0994360-mRNA-1:exon:12718;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69072380 | 69072454 | 69072380 | ID=Msa0994360-mRNA-1:exon:12719;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69072574 | 69072627 | 69072574 | ID=Msa0994360-mRNA-1:exon:12720;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69072786 | 69072823 | 69072786 | ID=Msa0994360-mRNA-1:exon:12721;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69073204 | 69073363 | 69073204 | ID=Msa0994360-mRNA-1:exon:12722;Parent=Msa0994360-mRNA-1 |
| chr6_4 | exon | 69073840 | 69074279 | 69073840 | ID=Msa0994360-mRNA-1:exon:12723;Parent=Msa0994360-mRNA-1 |
| chr6_4 | five_prime_UTR | 69069358 | 69069514 | 69069358 | ID=Msa0994360-mRNA-1:five_prime_utr;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69069515 | 69069588 | 69069515 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69070101 | 69070140 | 69070101 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69070268 | 69070371 | 69070268 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69070495 | 69070543 | 69070495 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69070686 | 69070792 | 69070686 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69071097 | 69071184 | 69071097 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69071532 | 69071660 | 69071532 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69072380 | 69072454 | 69072380 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69072574 | 69072627 | 69072574 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69072786 | 69072823 | 69072786 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69073204 | 69073363 | 69073204 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | CDS | 69073840 | 69073992 | 69073840 | ID=Msa0994360-mRNA-1:cds;Parent=Msa0994360-mRNA-1 |
| chr6_4 | three_prime_UTR | 69073993 | 69074279 | 69073993 | ID=Msa0994360-mRNA-1:three_prime_utr;Parent=Msa0994360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
