Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514540 | XP_003601828.1 | 99.706 | 340 | 1 | 0 | 1 | 340 | 1 | 340 | 0.0 | 691 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514540 | sp|P25861|G3PC_ANTMA | 91.592 | 333 | 28 | 0 | 7 | 339 | 4 | 336 | 0.0 | 632 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514540 | G7J2H2 | 99.706 | 340 | 1 | 0 | 1 | 340 | 1 | 340 | 0.0 | 691 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0514540 | -0.829307 | 5.538610e-55 | -8.615850e-47 |
| Msa0011060 | Msa0514540 | -0.838453 | 2.850133e-57 | -8.615850e-47 |
| Msa0011100 | Msa0514540 | -0.833877 | 4.142378e-56 | -8.615850e-47 |
| Msa0021400 | Msa0514540 | 0.812380 | 4.364143e-51 | -8.615850e-47 |
| Msa0029700 | Msa0514540 | 0.821807 | 3.317657e-53 | -8.615850e-47 |
| Msa0036560 | Msa0514540 | -0.801311 | 9.561514e-49 | -8.615850e-47 |
| Msa0048410 | Msa0514540 | -0.823075 | 1.683739e-53 | -8.615850e-47 |
| Msa0051910 | Msa0514540 | 0.805390 | 1.366328e-49 | -8.615850e-47 |
| Msa0056230 | Msa0514540 | -0.831311 | 1.793930e-55 | -8.615850e-47 |
| Msa0059080 | Msa0514540 | 0.810729 | 9.973742e-51 | -8.615850e-47 |
| Msa0064960 | Msa0514540 | 0.814959 | 1.181029e-51 | -8.615850e-47 |
| Msa0080020 | Msa0514540 | 0.823287 | 1.502445e-53 | -8.615850e-47 |
| Msa0089540 | Msa0514540 | 0.842358 | 2.715981e-58 | -8.615850e-47 |
| Msa0110240 | Msa0514540 | 0.866002 | 3.918458e-65 | -8.615850e-47 |
| Msa0120860 | Msa0514540 | 0.807217 | 5.629106e-50 | -8.615850e-47 |
| Msa0124960 | Msa0514540 | 0.817733 | 2.829932e-52 | -8.615850e-47 |
| Msa0125860 | Msa0514540 | 0.800333 | 1.513629e-48 | -8.615850e-47 |
| Msa0127220 | Msa0514540 | -0.800875 | 1.173750e-48 | -8.615850e-47 |
| Msa0132080 | Msa0514540 | -0.818440 | 1.957618e-52 | -8.615850e-47 |
| Msa0150330 | Msa0514540 | 0.818202 | 2.216306e-52 | -8.615850e-47 |
| Msa0154730 | Msa0514540 | 0.823148 | 1.618610e-53 | -8.615850e-47 |
| Msa0156530 | Msa0514540 | 0.829655 | 4.558454e-55 | -8.615850e-47 |
| Msa0173600 | Msa0514540 | -0.809398 | 1.930353e-50 | -8.615850e-47 |
| Msa0186200 | Msa0514540 | 0.806109 | 9.650227e-50 | -8.615850e-47 |
| Msa0187660 | Msa0514540 | 0.843170 | 1.652044e-58 | -8.615850e-47 |
| Msa0192050 | Msa0514540 | 0.821226 | 4.517932e-53 | -8.615850e-47 |
| Msa0197920 | Msa0514540 | 0.809865 | 1.531730e-50 | -8.615850e-47 |
| Msa0210790 | Msa0514540 | 0.803247 | 3.818283e-49 | -8.615850e-47 |
| Msa0211460 | Msa0514540 | 0.822847 | 1.902472e-53 | -8.615850e-47 |
| Msa0219840 | Msa0514540 | 0.812000 | 5.282625e-51 | -8.615850e-47 |
| Msa0225070 | Msa0514540 | -0.841041 | 6.041484e-58 | -8.615850e-47 |
| Msa0232660 | Msa0514540 | -0.803462 | 3.446631e-49 | -8.615850e-47 |
| Msa0372100 | Msa0514540 | 0.830589 | 2.696952e-55 | -8.615850e-47 |
| Msa0373550 | Msa0514540 | 0.957842 | 1.017837e-115 | -8.615850e-47 |
| Msa0379480 | Msa0514540 | 0.802611 | 5.167059e-49 | -8.615850e-47 |
| Msa0382060 | Msa0514540 | -0.800348 | 1.503077e-48 | -8.615850e-47 |
| Msa0383770 | Msa0514540 | 0.813341 | 2.688603e-51 | -8.615850e-47 |
| Msa0383930 | Msa0514540 | 0.829158 | 6.018086e-55 | -8.615850e-47 |
| Msa0384590 | Msa0514540 | 0.826958 | 2.038838e-54 | -8.615850e-47 |
| Msa0388210 | Msa0514540 | 0.818058 | 2.389949e-52 | -8.615850e-47 |
| Msa0390590 | Msa0514540 | -0.802913 | 4.477546e-49 | -8.615850e-47 |
| Msa0397130 | Msa0514540 | 0.809682 | 1.676910e-50 | -8.615850e-47 |
| Msa0403740 | Msa0514540 | -0.815393 | 9.459940e-52 | -8.615850e-47 |
| Msa0421220 | Msa0514540 | -0.805597 | 1.236495e-49 | -8.615850e-47 |
| Msa0422070 | Msa0514540 | 0.971617 | 1.907125e-133 | -8.615850e-47 |
| Msa0426240 | Msa0514540 | 0.800510 | 1.393053e-48 | -8.615850e-47 |
| Msa0427260 | Msa0514540 | -0.816754 | 4.696914e-52 | -8.615850e-47 |
| Msa0432260 | Msa0514540 | -0.812889 | 3.378246e-51 | -8.615850e-47 |
| Msa0434370 | Msa0514540 | 0.854404 | 1.258839e-61 | -8.615850e-47 |
| Msa0434660 | Msa0514540 | 0.801462 | 8.900603e-49 | -8.615850e-47 |
| Msa0452770 | Msa0514540 | 0.807523 | 4.847843e-50 | -8.615850e-47 |
| Msa0456450 | Msa0514540 | -0.814583 | 1.430734e-51 | -8.615850e-47 |
| Msa0457070 | Msa0514540 | -0.801682 | 8.024774e-49 | -8.615850e-47 |
| Msa0468660 | Msa0514540 | 0.933983 | 8.147621e-96 | -8.615850e-47 |
| Msa0478130 | Msa0514540 | 0.816909 | 4.336610e-52 | -8.615850e-47 |
| Msa0478190 | Msa0514540 | 0.837705 | 4.439397e-57 | -8.615850e-47 |
| Msa0242720 | Msa0514540 | 0.809765 | 1.609771e-50 | -8.615850e-47 |
| Msa0266140 | Msa0514540 | -0.825296 | 5.065463e-54 | -8.615850e-47 |
| Msa0270730 | Msa0514540 | -0.810895 | 9.180900e-51 | -8.615850e-47 |
| Msa0290800 | Msa0514540 | 0.814837 | 1.257193e-51 | -8.615850e-47 |
| Msa0297270 | Msa0514540 | -0.805462 | 1.319473e-49 | -8.615850e-47 |
| Msa0298400 | Msa0514540 | 0.802777 | 4.776506e-49 | -8.615850e-47 |
| Msa0304060 | Msa0514540 | -0.815488 | 9.009352e-52 | -8.615850e-47 |
| Msa0328870 | Msa0514540 | 0.829201 | 5.875874e-55 | -8.615850e-47 |
| Msa0358470 | Msa0514540 | 0.851599 | 7.988664e-61 | -8.615850e-47 |
| Msa0364030 | Msa0514540 | -0.815525 | 8.839615e-52 | -8.615850e-47 |
| Msa0514540 | Msa0522280 | 0.808400 | 3.156054e-50 | -8.615850e-47 |
| Msa0514540 | Msa0522540 | 0.814533 | 1.467674e-51 | -8.615850e-47 |
| Msa0514540 | Msa0527560 | 0.807527 | 4.838900e-50 | -8.615850e-47 |
| Msa0514540 | Msa0528830 | -0.802107 | 6.564435e-49 | -8.615850e-47 |
| Msa0514540 | Msa0533610 | -0.813601 | 2.356354e-51 | -8.615850e-47 |
| Msa0514540 | Msa0538050 | -0.821787 | 3.353468e-53 | -8.615850e-47 |
| Msa0514540 | Msa0566460 | 0.823432 | 1.389483e-53 | -8.615850e-47 |
| Msa0514540 | Msa0569980 | -0.807197 | 5.684705e-50 | -8.615850e-47 |
| Msa0514540 | Msa0572730 | -0.820632 | 6.190774e-53 | -8.615850e-47 |
| Msa0514540 | Msa0577690 | 0.800137 | 1.659726e-48 | -8.615850e-47 |
| Msa0514540 | Msa0579080 | 0.802323 | 5.924041e-49 | -8.615850e-47 |
| Msa0514540 | Msa0580380 | 0.806214 | 9.171857e-50 | -8.615850e-47 |
| Msa0514540 | Msa0606600 | 0.806760 | 7.032583e-50 | -8.615850e-47 |
| Msa0514540 | Msa0610240 | -0.829653 | 4.562813e-55 | -8.615850e-47 |
| Msa0514540 | Msa0616890 | -0.811561 | 6.582082e-51 | -8.615850e-47 |
| Msa0514540 | Msa0654500 | -0.810088 | 1.371638e-50 | -8.615850e-47 |
| Msa0514540 | Msa0658120 | 0.815313 | 9.857393e-52 | -8.615850e-47 |
| Msa0514540 | Msa0658520 | -0.809113 | 2.221574e-50 | -8.615850e-47 |
| Msa0514540 | Msa0659020 | -0.809257 | 2.069625e-50 | -8.615850e-47 |
| Msa0514540 | Msa0684150 | 0.807548 | 4.789293e-50 | -8.615850e-47 |
| Msa0514540 | Msa0685390 | -0.833230 | 6.008238e-56 | -8.615850e-47 |
| Msa0514540 | Msa0686830 | 0.800804 | 1.213805e-48 | -8.615850e-47 |
| Msa0514540 | Msa0689660 | 0.807411 | 5.120692e-50 | -8.615850e-47 |
| Msa0514540 | Msa0700410 | 0.829737 | 4.355160e-55 | -8.615850e-47 |
| Msa0514540 | Msa0701800 | -0.822577 | 2.199550e-53 | -8.615850e-47 |
| Msa0514540 | Msa0702020 | -0.804865 | 1.759620e-49 | -8.615850e-47 |
| Msa0514540 | Msa0702690 | -0.803037 | 4.219930e-49 | -8.615850e-47 |
| Msa0514540 | Msa0702970 | 0.803450 | 3.466470e-49 | -8.615850e-47 |
| Msa0514540 | Msa0703430 | -0.830648 | 2.608440e-55 | -8.615850e-47 |
| Msa0514540 | Msa0708870 | -0.804648 | 1.952791e-49 | -8.615850e-47 |
| Msa0514540 | Msa0716700 | 0.808370 | 3.202174e-50 | -8.615850e-47 |
| Msa0514540 | Msa0721930 | 0.827992 | 1.151373e-54 | -8.615850e-47 |
| Msa0514540 | Msa0733240 | -0.813136 | 2.982426e-51 | -8.615850e-47 |
| Msa0514540 | Msa0756670 | -0.805590 | 1.240263e-49 | -8.615850e-47 |
| Msa0514540 | Msa0761830 | 0.802554 | 5.309628e-49 | -8.615850e-47 |
| Msa0514540 | Msa0762930 | 0.829812 | 4.174505e-55 | -8.615850e-47 |
| Msa0514540 | Msa0772420 | 0.806531 | 7.861470e-50 | -8.615850e-47 |
| Msa0514540 | Msa0805390 | 0.826859 | 2.152964e-54 | -8.615850e-47 |
| Msa0514540 | Msa0812020 | -0.811991 | 5.307593e-51 | -8.615850e-47 |
| Msa0514540 | Msa0829770 | -0.801665 | 8.089771e-49 | -8.615850e-47 |
| Msa0514540 | Msa0852090 | -0.802307 | 5.970206e-49 | -8.615850e-47 |
| Msa0514540 | Msa0852890 | 0.808452 | 3.076392e-50 | -8.615850e-47 |
| Msa0514540 | Msa0870220 | -0.806714 | 7.194729e-50 | -8.615850e-47 |
| Msa0514540 | Msa0880050 | 0.810702 | 1.010596e-50 | -8.615850e-47 |
| Msa0514540 | Msa0900830 | 0.843718 | 1.179693e-58 | -8.615850e-47 |
| Msa0514540 | Msa0903460 | -0.814865 | 1.239267e-51 | -8.615850e-47 |
| Msa0514540 | Msa0921860 | 0.827895 | 1.214926e-54 | -8.615850e-47 |
| Msa0514540 | Msa0926240 | 0.832361 | 9.875944e-56 | -8.615850e-47 |
| Msa0514540 | Msa0932140 | 0.805585 | 1.243347e-49 | -8.615850e-47 |
| Msa0514540 | Msa0935930 | -0.815927 | 7.193360e-52 | -8.615850e-47 |
| Msa0514540 | Msa0936630 | 0.805886 | 1.074785e-49 | -8.615850e-47 |
| Msa0514540 | Msa0958830 | 0.824016 | 1.014237e-53 | -8.615850e-47 |
| Msa0514540 | Msa0965800 | 0.845421 | 4.105565e-59 | -8.615850e-47 |
| Msa0514540 | Msa0967900 | -0.836530 | 8.868060e-57 | -8.615850e-47 |
| Msa0514540 | Msa0970040 | 0.806079 | 9.790998e-50 | -8.615850e-47 |
| Msa0514540 | Msa0970100 | 0.816286 | 5.981865e-52 | -8.615850e-47 |
| Msa0514540 | Msa0971780 | -0.801289 | 9.658502e-49 | -8.615850e-47 |
| Msa0514540 | Msa0994360 | 0.800186 | 1.621982e-48 | -8.615850e-47 |
| Msa0514540 | Msa1002970 | -0.813246 | 2.819967e-51 | -8.615850e-47 |
| Msa0514540 | Msa1014550 | -0.814089 | 1.839807e-51 | -8.615850e-47 |
| Msa0514540 | Msa1026710 | 0.824769 | 6.744430e-54 | -8.615850e-47 |
| Msa0514540 | Msa1039150 | -0.815915 | 7.236866e-52 | -8.615850e-47 |
| Msa0514540 | Msa1053340 | 0.802852 | 4.609162e-49 | -8.615850e-47 |
| Msa0514540 | Msa1055520 | -0.822222 | 2.659282e-53 | -8.615850e-47 |
| Msa0514540 | Msa1070630 | -0.808881 | 2.490692e-50 | -8.615850e-47 |
| Msa0514540 | Msa1078590 | -0.801136 | 1.038363e-48 | -8.615850e-47 |
| Msa0514540 | Msa1078760 | -0.804981 | 1.664176e-49 | -8.615850e-47 |
| Msa0514540 | Msa1088400 | -0.845965 | 2.922479e-59 | -8.615850e-47 |
| Msa0514540 | Msa1093190 | -0.833594 | 4.875626e-56 | -8.615850e-47 |
| Msa0514540 | Msa1094810 | 0.826768 | 2.262697e-54 | -8.615850e-47 |
| Msa0514540 | Msa1108960 | 0.803185 | 3.933582e-49 | -8.615850e-47 |
| Msa0514540 | Msa1128230 | -0.802865 | 4.580650e-49 | -8.615850e-47 |
| Msa0514540 | Msa1129240 | 0.807734 | 4.374065e-50 | -8.615850e-47 |
| Msa0514540 | Msa1132850 | 0.822050 | 2.914349e-53 | -8.615850e-47 |
| Msa0514540 | Msa1142590 | 0.803119 | 4.058785e-49 | -8.615850e-47 |
| Msa0514540 | Msa1146980 | 0.879401 | 1.284595e-69 | -8.615850e-47 |
| Msa0514540 | Msa1167360 | 0.802521 | 5.393592e-49 | -8.615850e-47 |
| Msa0514540 | Msa1169590 | -0.808343 | 3.244366e-50 | -8.615850e-47 |
| Msa0514540 | Msa1172870 | 0.844847 | 5.864608e-59 | -8.615850e-47 |
| Msa0514540 | Msa1184680 | 0.822031 | 2.943765e-53 | -8.615850e-47 |
| Msa0514540 | Msa1186260 | 0.818408 | 1.991162e-52 | -8.615850e-47 |
| Msa0514540 | Msa1191530 | -0.805918 | 1.058682e-49 | -8.615850e-47 |
| Msa0514540 | Msa1194480 | -0.813280 | 2.771898e-51 | -8.615850e-47 |
| Msa0514540 | Msa1197720 | 0.835804 | 1.356011e-56 | -8.615850e-47 |
| Msa0514540 | Msa1199540 | -0.808822 | 2.564066e-50 | -8.615850e-47 |
| Msa0514540 | Msa1202470 | 0.833273 | 5.862459e-56 | -8.615850e-47 |
| Msa0514540 | Msa1204870 | -0.803632 | 3.177940e-49 | -8.615850e-47 |
| Msa0514540 | Msa1204900 | -0.809105 | 2.229870e-50 | -8.615850e-47 |
| Msa0514540 | Msa1205270 | -0.819813 | 9.534880e-53 | -8.615850e-47 |
| Msa0514540 | Msa1251410 | 0.823200 | 1.574310e-53 | -8.615850e-47 |
| Msa0514540 | Msa1254910 | 0.835578 | 1.546723e-56 | -8.615850e-47 |
| Msa0514540 | Msa1279200 | -0.804245 | 2.369982e-49 | -8.615850e-47 |
| Msa0514540 | Msa1281780 | 0.814468 | 1.516947e-51 | -8.615850e-47 |
| Msa0514540 | Msa1295210 | -0.805444 | 1.331178e-49 | -8.615850e-47 |
| Msa0514540 | Msa1321010 | 0.804922 | 1.711860e-49 | -8.615850e-47 |
| Msa0514540 | Msa1342360 | -0.813827 | 2.101370e-51 | -8.615850e-47 |
| Msa0514540 | Msa1348860 | -0.804236 | 2.379534e-49 | -8.615850e-47 |
| Msa0514540 | Msa1361580 | -0.826385 | 2.792621e-54 | -8.615850e-47 |
| Msa0514540 | Msa1363010 | 0.807256 | 5.522905e-50 | -8.615850e-47 |
| Msa0514540 | Msa1377980 | -0.815983 | 6.988310e-52 | -8.615850e-47 |
| Msa0514540 | Msa1384410 | -0.804896 | 1.733162e-49 | -8.615850e-47 |
| Msa0514540 | Msa1395050 | 0.812685 | 3.743349e-51 | -8.615850e-47 |
| Msa0514540 | Msa1400290 | -0.801235 | 9.908183e-49 | -8.615850e-47 |
| Msa0514540 | Msa1403940 | 0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0514540 | Msa1408280 | -0.814812 | 1.273218e-51 | -8.615850e-47 |
| Msa0514540 | Msa1423050 | 0.810301 | 1.234104e-50 | -8.615850e-47 |
| Msa0514540 | Msa1429810 | 0.804093 | 2.549192e-49 | -8.615850e-47 |
| Msa0514540 | Msa1430250 | 0.806968 | 6.355852e-50 | -8.615850e-47 |
| Msa0514540 | Msa1433060 | -0.810377 | 1.187886e-50 | -8.615850e-47 |
| Msa0514540 | Msa1434300 | 0.834950 | 2.227523e-56 | -8.615850e-47 |
| Msa0514540 | Msa1445010 | 0.845282 | 4.475800e-59 | -8.615850e-47 |
| Msa0514540 | Msa1459130 | -0.816160 | 6.382511e-52 | -8.615850e-47 |
| Msa0514540 | Msa1462780 | 0.832574 | 8.746419e-56 | -8.615850e-47 |
| Msa0514540 | Msa1464470 | -0.803874 | 2.830011e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514540 | MtrunA17_Chr3g0122971 | 93.529 | 340 | 1 | 1 | 1 | 340 | 1 | 319 | 0.0 | 634 |
| Msa0514540 | MtrunA17_Chr4g0057861 | 90.060 | 332 | 33 | 0 | 6 | 337 | 5 | 336 | 0.0 | 621 |
| Msa0514540 | MtrunA17_Chr6g0458861 | 85.373 | 335 | 49 | 0 | 6 | 340 | 3 | 337 | 0.0 | 598 |
| Msa0514540 | MtrunA17_Chr2g0310421 | 72.781 | 338 | 91 | 1 | 2 | 339 | 78 | 414 | 0.0 | 509 |
| Msa0514540 | MtrunA17_Chr8g0357071 | 76.378 | 254 | 46 | 4 | 84 | 325 | 56 | 307 | 6.68e-129 | 370 |
| Msa0514540 | MtrunA17_Chr3g0144151 | 47.447 | 333 | 166 | 7 | 6 | 332 | 85 | 414 | 3.58e-88 | 272 |
| Msa0514540 | MtrunA17_Chr7g0252641 | 46.687 | 332 | 171 | 5 | 4 | 332 | 67 | 395 | 1.40e-85 | 264 |
| Msa0514540 | MtrunA17_Chr8g0360951 | 83.784 | 148 | 15 | 2 | 180 | 327 | 1 | 139 | 5.55e-80 | 240 |
| Msa0514540 | MtrunA17_Chr2g0316821 | 83.673 | 49 | 8 | 0 | 220 | 268 | 7 | 55 | 1.41e-19 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514540 | AT1G13440.1 | 89.552 | 335 | 35 | 0 | 3 | 337 | 2 | 336 | 0.0 | 626 |
| Msa0514540 | AT3G04120.1 | 89.552 | 335 | 35 | 0 | 3 | 337 | 2 | 336 | 0.0 | 626 |
| Msa0514540 | AT1G13440.2 | 82.090 | 335 | 32 | 1 | 3 | 337 | 2 | 308 | 0.0 | 556 |
| Msa0514540 | AT1G79530.1 | 72.271 | 339 | 93 | 1 | 2 | 340 | 82 | 419 | 0.0 | 511 |
| Msa0514540 | AT1G16300.1 | 71.893 | 338 | 94 | 1 | 3 | 340 | 81 | 417 | 1.53e-180 | 506 |
| Msa0514540 | AT1G42970.1 | 47.493 | 339 | 169 | 7 | 6 | 338 | 81 | 416 | 9.41e-95 | 289 |
| Msa0514540 | AT1G12900.3 | 48.048 | 333 | 167 | 5 | 3 | 332 | 12 | 341 | 3.24e-90 | 274 |
| Msa0514540 | AT1G12900.4 | 48.048 | 333 | 167 | 5 | 3 | 332 | 12 | 341 | 3.24e-90 | 274 |
| Msa0514540 | AT1G12900.1 | 48.048 | 333 | 167 | 5 | 3 | 332 | 61 | 390 | 7.72e-90 | 275 |
| Msa0514540 | AT1G12900.5 | 48.048 | 333 | 167 | 5 | 3 | 332 | 103 | 432 | 1.75e-89 | 275 |
| Msa0514540 | AT3G26650.1 | 46.246 | 333 | 173 | 5 | 3 | 332 | 58 | 387 | 2.31e-86 | 266 |
| Msa0514540 | AT1G12900.2 | 49.814 | 269 | 132 | 3 | 66 | 332 | 41 | 308 | 9.18e-74 | 231 |
Find 98 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGCAAGCTGAAGGGTATTT+TGG | 0.162108 | 3_4:-65264227 | Msa0514540:CDS |
| AGTAGTGTTGAGTTGAAATT+AGG | 0.248794 | 3_4:+65266301 | None:intergenic |
| CCTCTCCAGTCCTTGCTTGA+TGG | 0.259153 | 3_4:+65264658 | None:intergenic |
| ATCTCCAGTGAGACAAAATT+TGG | 0.265475 | 3_4:+65263779 | None:intergenic |
| ACTTTGTGAAACTCGTTTCT+TGG | 0.270714 | 3_4:-65264009 | Msa0514540:CDS |
| GTCAATTTACCGTTCAATAC+TGG | 0.280860 | 3_4:+65264457 | None:intergenic |
| CAGGTTATTAATGACCGATT+TGG | 0.281961 | 3_4:-65264917 | Msa0514540:CDS |
| TATAAACAAATTTAAAAGAT+TGG | 0.282177 | 3_4:+65263517 | None:intergenic |
| CTTGGCAGCTCCAGTGCTGC+TGG | 0.294421 | 3_4:+65264606 | None:intergenic |
| AAAACAGGATTTGGAAGAAT+TGG | 0.309904 | 3_4:-65266023 | Msa0514540:intron |
| GACACTAAGACCCTTCTCTT+TGG | 0.356905 | 3_4:-65265762 | Msa0514540:CDS |
| AAACATAGGTGCATCTTTGC+TGG | 0.359553 | 3_4:+65265123 | None:intergenic |
| ATTCAAAGCAATTCCAGCTT+TGG | 0.384329 | 3_4:+65264036 | None:intergenic |
| ATGACAACGAATGGGGTTAC+AGG | 0.389525 | 3_4:-65263985 | Msa0514540:intron |
| GTGGTATCTACTGACTTTAT+TGG | 0.395775 | 3_4:-65264187 | Msa0514540:CDS |
| GAGATTAGAGTGAGGTTTGG+TGG | 0.402333 | 3_4:+65266340 | None:intergenic |
| TCACCCCATGGAATCTCCTC+AGG | 0.421872 | 3_4:+65265597 | None:intergenic |
| GCCACTCAGAAGACTGTTGA+TGG | 0.424666 | 3_4:-65264682 | Msa0514540:CDS |
| AGCAGAAATAACAACCTTCT+TGG | 0.437227 | 3_4:+65265147 | None:intergenic |
| TGGCTTGATGAGTCTGAGCT+TGG | 0.438497 | 3_4:-65263818 | Msa0514540:exon |
| CAAAGCTGCTGCTCACTTGA+AGG | 0.450187 | 3_4:-65265523 | Msa0514540:intron |
| CAGTTGTTGACCTTACTGTA+AGG | 0.450759 | 3_4:-65264399 | Msa0514540:CDS |
| AGCATCTTTGATGCCAAAGC+TGG | 0.451793 | 3_4:-65264049 | Msa0514540:CDS |
| ACTCAACACTACTATCTCAA+TGG | 0.452591 | 3_4:-65266291 | Msa0514540:exon |
| GATTGTCCACATTGCTTCTG+TGG | 0.453352 | 3_4:-65263838 | Msa0514540:CDS |
| GACCGATTTGGAATCGTTGA+GGG | 0.456120 | 3_4:-65264905 | Msa0514540:CDS |
| AATGAGATTAGAGTGAGGTT+TGG | 0.460637 | 3_4:+65266337 | None:intergenic |
| TTGGAAACAATGTTAAGCTC+TGG | 0.470905 | 3_4:+65265070 | None:intergenic |
| TTCTTGGTATGACAACGAAT+GGG | 0.472520 | 3_4:-65263993 | Msa0514540:CDS |
| TCTTCTCAAGCCTTACAGTA+AGG | 0.474802 | 3_4:+65264389 | None:intergenic |
| AACATCATTCCCAGCAGCAC+TGG | 0.480002 | 3_4:-65264616 | Msa0514540:CDS |
| GATGCACCTATGTTTGTTGT+TGG | 0.480077 | 3_4:-65265115 | Msa0514540:CDS |
| TTCAAATATGACACTGTTCA+CGG | 0.482160 | 3_4:-65265816 | Msa0514540:CDS |
| TGGGACACGGAATGACATTC+CGG | 0.489853 | 3_4:+65264435 | None:intergenic |
| ATTTGGAAGAATTGGACGAT+TGG | 0.494519 | 3_4:-65266015 | Msa0514540:CDS |
| TAGCATCTGACAAGAAGATC+AGG | 0.494730 | 3_4:-65266167 | Msa0514540:CDS |
| GATTACGTTATTGAGTCAAC+TGG | 0.498321 | 3_4:-65265564 | Msa0514540:CDS |
| GAGATTCCATGGGGTGAGGT+TGG | 0.499881 | 3_4:-65265591 | Msa0514540:CDS |
| GACCCTCAACGATTCCAAAT+CGG | 0.501135 | 3_4:+65264903 | None:intergenic |
| CTGACTTTATTGGCGATAGC+AGG | 0.501827 | 3_4:-65264177 | Msa0514540:intron |
| CTCAACACTACTATCTCAAT+GGG | 0.503651 | 3_4:-65266290 | Msa0514540:intron |
| TTTCTTGGTATGACAACGAA+TGG | 0.505583 | 3_4:-65263994 | Msa0514540:CDS |
| GGAATCAGAGGGCAAGCTGA+AGG | 0.509794 | 3_4:-65264236 | Msa0514540:CDS |
| GATAAATAAACAACCTGTGA+TGG | 0.511375 | 3_4:+65264862 | None:intergenic |
| CAACTGAAACATCGACGGTT+GGG | 0.515252 | 3_4:+65264416 | None:intergenic |
| TTTCATCACTACTGATTACA+TGG | 0.515255 | 3_4:-65265937 | Msa0514540:intron |
| CAGCAGCACTGGAGCTGCCA+AGG | 0.520669 | 3_4:-65264605 | Msa0514540:intron |
| GGCAGCCTTGATCTGCTCAT+AGG | 0.524781 | 3_4:+65264360 | None:intergenic |
| TTGGCAGCTCCAGTGCTGCT+GGG | 0.526344 | 3_4:+65264607 | None:intergenic |
| CAATCAAGCTAAATATAAAG+AGG | 0.528587 | 3_4:+65263560 | None:intergenic |
| AAACATCGACGGTTGGGACA+CGG | 0.531370 | 3_4:+65264422 | None:intergenic |
| CTTCTTTCTCACCAAAGAGA+AGG | 0.533597 | 3_4:+65265751 | None:intergenic |
| TTCTTTCTCACCAAAGAGAA+GGG | 0.538245 | 3_4:+65265752 | None:intergenic |
| ACAACTGAAACATCGACGGT+TGG | 0.545734 | 3_4:+65264415 | None:intergenic |
| GTTAGTAGTGCAACTAGCAT+TGG | 0.551894 | 3_4:+65265051 | None:intergenic |
| AACATAGGTGCATCTTTGCT+GGG | 0.553014 | 3_4:+65265124 | None:intergenic |
| ATGGTCCATCAAGCAAGGAC+TGG | 0.555599 | 3_4:-65264663 | Msa0514540:CDS |
| CTGCCTTGCTCCCCTCGCCA+AGG | 0.563779 | 3_4:-65265029 | Msa0514540:intron |
| ATGACACTGTTCACGGTCAG+TGG | 0.566865 | 3_4:-65265809 | Msa0514540:CDS |
| AGCAACCTATGAGCAGATCA+AGG | 0.567372 | 3_4:-65264365 | Msa0514540:CDS |
| AAACCTTGGCGAGGGGAGCA+AGG | 0.568255 | 3_4:+65265026 | None:intergenic |
| GGAACCCTGAGGAGATTCCA+TGG | 0.575104 | 3_4:-65265602 | Msa0514540:CDS |
| AGTCTGAGCTTGGATTGCAT+TGG | 0.577784 | 3_4:-65263808 | Msa0514540:three_prime_UTR |
| TTAACACCAACAACAAACAT+AGG | 0.578256 | 3_4:+65265109 | None:intergenic |
| TCCCTCTCTAAAACAAGAGT+AGG | 0.578982 | 3_4:+65263634 | None:intergenic |
| TGAGGAGATTCCATGGGGTG+AGG | 0.584999 | 3_4:-65265595 | Msa0514540:CDS |
| TGACCGATTTGGAATCGTTG+AGG | 0.585725 | 3_4:-65264906 | Msa0514540:CDS |
| ATTTGAAACATACAGGCTGT+AGG | 0.586694 | 3_4:-65264490 | Msa0514540:intron |
| GAACCCTGAGGAGATTCCAT+GGG | 0.589804 | 3_4:-65265601 | Msa0514540:CDS |
| TCAAGCAAGGACTGGAGAGG+TGG | 0.590129 | 3_4:-65264655 | Msa0514540:CDS |
| GTATTGAACGGTAAATTGAC+CGG | 0.592350 | 3_4:-65264454 | Msa0514540:CDS |
| ATAAGAATGAGATTAGAGTG+AGG | 0.597103 | 3_4:+65266332 | None:intergenic |
| ACCACAGTTCACGCCATCAC+AGG | 0.598843 | 3_4:-65264875 | Msa0514540:intron |
| AAGATCAGGATCGGAATCAA+CGG | 0.599281 | 3_4:-65266153 | Msa0514540:intron |
| TGATTAGGGTGGTGCCAAGA+AGG | 0.600438 | 3_4:-65265161 | Msa0514540:intron |
| CACCCCATGGAATCTCCTCA+GGG | 0.600637 | 3_4:+65265598 | None:intergenic |
| GCTGCTGGGAATGATGTTGA+AGG | 0.601432 | 3_4:+65264621 | None:intergenic |
| TCAGCTCCAACCTCACCCCA+TGG | 0.603751 | 3_4:+65265585 | None:intergenic |
| TGTTGTTGGTGTTAACGAGA+AGG | 0.604083 | 3_4:-65265101 | Msa0514540:CDS |
| GAATCAGAGGGCAAGCTGAA+GGG | 0.606362 | 3_4:-65264235 | Msa0514540:CDS |
| GGGTTATACTGAAGATGATG+TGG | 0.606548 | 3_4:-65264206 | Msa0514540:CDS |
| GACAATCAAATCAATAACAC+GGG | 0.607012 | 3_4:+65263854 | None:intergenic |
| ATGTAATCAGTAGTGATGAA+AGG | 0.611234 | 3_4:+65265939 | None:intergenic |
| TCTTGGTATGACAACGAATG+GGG | 0.619721 | 3_4:-65263992 | Msa0514540:CDS |
| AGTGTCATATTTGAACATAT+AGG | 0.628379 | 3_4:+65265824 | None:intergenic |
| TCTGACAAGAAGATCAGGAT+CGG | 0.628839 | 3_4:-65266162 | Msa0514540:CDS |
| AAGAGGATCGCAAAGAGACA+TGG | 0.630623 | 3_4:+65263577 | None:intergenic |
| TGTTGATGGTCCATCAAGCA+AGG | 0.632457 | 3_4:-65264668 | Msa0514540:CDS |
| GTCAACAACTGAAACATCGA+CGG | 0.646627 | 3_4:+65264411 | None:intergenic |
| CCATCAAGCAAGGACTGGAG+AGG | 0.655042 | 3_4:-65264658 | Msa0514540:CDS |
| GGACAATCAAATCAATAACA+CGG | 0.656794 | 3_4:+65263853 | None:intergenic |
| AAAACCAGGGAGGAATCAGA+GGG | 0.660427 | 3_4:-65264247 | Msa0514540:intron |
| ACCTGTGATGGCGTGAACTG+TGG | 0.667657 | 3_4:+65264874 | None:intergenic |
| AAAGTGCTTCCAGTATTGAA+CGG | 0.668457 | 3_4:-65264466 | Msa0514540:CDS |
| ATCAAGCCACAGAAGCAATG+TGG | 0.677587 | 3_4:+65263832 | None:intergenic |
| AACCCTGAGGAGATTCCATG+GGG | 0.716862 | 3_4:-65265600 | Msa0514540:CDS |
| ACCATCAACAGTCTTCTGAG+TGG | 0.726815 | 3_4:+65264681 | None:intergenic |
| TCTGAATAATAGGAACCCTG+AGG | 0.747270 | 3_4:-65265613 | Msa0514540:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTGAAATTTATGTAATT+TGG | - | chr3_4:65264657-65264676 | Msa0514540:CDS | 10.0% |
| !! | TATAAACAAATTTAAAAGAT+TGG | + | chr3_4:65266337-65266356 | None:intergenic | 10.0% |
| !!! | TGTTTGATTAATTTTGTAAT+CGG | + | chr3_4:65263953-65263972 | None:intergenic | 15.0% |
| !! | TATCAAAATCTAATTAATTG+TGG | + | chr3_4:65264635-65264654 | None:intergenic | 15.0% |
| !!! | TTTTAAATTATTAGCTTCAT+TGG | - | chr3_4:65264885-65264904 | Msa0514540:CDS | 15.0% |
| !! | AAATTTGTCAAATTATTACA+TGG | - | chr3_4:65265285-65265304 | Msa0514540:intron | 15.0% |
| !!! | GCATTTTTATTTTTGTATTT+TGG | - | chr3_4:65266168-65266187 | Msa0514540:intron | 15.0% |
| !! | TAAACGAGAAATAGATTAAA+CGG | + | chr3_4:65263636-65263655 | None:intergenic | 20.0% |
| !!! | AACTGTTTTAACTTTAAAAC+AGG | - | chr3_4:65263813-65263832 | Msa0514540:three_prime_UTR | 20.0% |
| !!! | TTTAACTTTAAAACAGGATT+TGG | - | chr3_4:65263819-65263838 | Msa0514540:exon | 20.0% |
| !!! | TAATTTATGATCTGTGATTT+TGG | - | chr3_4:65264143-65264162 | Msa0514540:intron | 20.0% |
| !! | ATTAATTACAACATCCAAAA+GGG | + | chr3_4:65264184-65264203 | None:intergenic | 20.0% |
| !! | AATTAATTACAACATCCAAA+AGG | + | chr3_4:65264185-65264204 | None:intergenic | 20.0% |
| !!! | TATTATTTGATTGAGCATTT+TGG | - | chr3_4:65264382-65264401 | Msa0514540:CDS | 20.0% |
| !!! | ATTATTTGATTGAGCATTTT+GGG | - | chr3_4:65264383-65264402 | Msa0514540:CDS | 20.0% |
| !!! | ATATTGAATTTGAAACATAC+AGG | - | chr3_4:65265354-65265373 | Msa0514540:intron | 20.0% |
| !!! | TTTTGCAATTTCAACAAAAT+AGG | + | chr3_4:65265587-65265606 | None:intergenic | 20.0% |
| ! | AGTGTCATATTTGAACATAT+AGG | + | chr3_4:65264030-65264049 | None:intergenic | 25.0% |
| ! | TTAATTACAACATCCAAAAG+GGG | + | chr3_4:65264183-65264202 | None:intergenic | 25.0% |
| !! | TTATTTGATTGAGCATTTTG+GGG | - | chr3_4:65264384-65264403 | Msa0514540:CDS | 25.0% |
| ! | TTATGTAATTTGGATTGTTG+TGG | - | chr3_4:65264667-65264686 | Msa0514540:CDS | 25.0% |
| ! | TATTAATCTTTACTCTTTGC+AGG | - | chr3_4:65264915-65264934 | Msa0514540:CDS | 25.0% |
| !! | TGATTAACTGATTGATTCTT+TGG | - | chr3_4:65265134-65265153 | Msa0514540:CDS | 25.0% |
| !! | TTTATCATTATAGAGTACCT+TGG | + | chr3_4:65265266-65265285 | None:intergenic | 25.0% |
| ! | CAAATTATTACATGGTTGAA+TGG | - | chr3_4:65265293-65265312 | Msa0514540:intron | 25.0% |
| ! | AAGTTTAACACTTTACTTGA+TGG | + | chr3_4:65265515-65265534 | None:intergenic | 25.0% |
| ! | AAAATAGGTTTATGTTAGGA+GGG | + | chr3_4:65265572-65265591 | None:intergenic | 25.0% |
| ! | CAACAAAATAGGTTTATGTT+AGG | + | chr3_4:65265576-65265595 | None:intergenic | 25.0% |
| !!! | TGAACTTTATTTTCATTTGC+AGG | - | chr3_4:65265776-65265795 | Msa0514540:CDS | 25.0% |
| ! | ATCACAATATGACATTGAAT+TGG | - | chr3_4:65265911-65265930 | Msa0514540:intron | 25.0% |
| !! | GCAACACAAATTTTTATTCT+TGG | + | chr3_4:65266118-65266137 | None:intergenic | 25.0% |
| ! | AGAATAAAAATTTGTGTTGC+TGG | - | chr3_4:65266118-65266137 | Msa0514540:intron | 25.0% |
| !! | GAATAAAAATTTGTGTTGCT+GGG | - | chr3_4:65266119-65266138 | Msa0514540:intron | 25.0% |
| !!! | TGTATTTTGGATTGAATAGA+CGG | - | chr3_4:65266181-65266200 | Msa0514540:intron | 25.0% |
| ! | CAATCAAGCTAAATATAAAG+AGG | + | chr3_4:65266294-65266313 | None:intergenic | 25.0% |
| ATAAGAATGAGATTAGAGTG+AGG | + | chr3_4:65263522-65263541 | None:intergenic | 30.0% | |
| !! | AGTAGTGTTGAGTTGAAATT+AGG | + | chr3_4:65263553-65263572 | None:intergenic | 30.0% |
| AAAACAGGATTTGGAAGAAT+TGG | - | chr3_4:65263828-65263847 | Msa0514540:exon | 30.0% | |
| ATGTAATCAGTAGTGATGAA+AGG | + | chr3_4:65263915-65263934 | None:intergenic | 30.0% | |
| ! | TTTCATCACTACTGATTACA+TGG | - | chr3_4:65263914-65263933 | Msa0514540:intron | 30.0% |
| TTCAAATATGACACTGTTCA+CGG | - | chr3_4:65264035-65264054 | Msa0514540:CDS | 30.0% | |
| ! | GCATTTTGAACTTAAGGTTA+AGG | - | chr3_4:65264067-65264086 | Msa0514540:intron | 30.0% |
| ATCACAGATCATAAATTACC+TGG | + | chr3_4:65264141-65264160 | None:intergenic | 30.0% | |
| TCTGATTGCATCTGAATAAT+AGG | - | chr3_4:65264228-65264247 | Msa0514540:CDS | 30.0% | |
| TACTCAATATCACTGTAACA+GGG | + | chr3_4:65264595-65264614 | None:intergenic | 30.0% | |
| TTAACACCAACAACAAACAT+AGG | + | chr3_4:65264745-65264764 | None:intergenic | 30.0% | |
| !! | AGGGTATTGAAAAAAAACCT+TGG | + | chr3_4:65264842-65264861 | None:intergenic | 30.0% |
| CCAATAAACATGCTACAAAA+GGG | + | chr3_4:65264861-65264880 | None:intergenic | 30.0% | |
| ACCAATAAACATGCTACAAA+AGG | + | chr3_4:65264862-65264881 | None:intergenic | 30.0% | |
| GATAAATAAACAACCTGTGA+TGG | + | chr3_4:65264992-65265011 | None:intergenic | 30.0% | |
| GGAGGGAAAAATTATTCAAT+TGG | + | chr3_4:65265555-65265574 | None:intergenic | 30.0% | |
| CAAAATAGGTTTATGTTAGG+AGG | + | chr3_4:65265573-65265592 | None:intergenic | 30.0% | |
| TTGTTGAAATTGCAAAAACC+AGG | - | chr3_4:65265590-65265609 | Msa0514540:CDS | 30.0% | |
| TGTTGAAATTGCAAAAACCA+GGG | - | chr3_4:65265591-65265610 | Msa0514540:CDS | 30.0% | |
| ! | AAACTGTCATGATCAGTTTT+TGG | - | chr3_4:65265728-65265747 | Msa0514540:intron | 30.0% |
| AATGTCATATTGTGATAGCA+AGG | + | chr3_4:65265907-65265926 | None:intergenic | 30.0% | |
| ! | GATGAACACTGTGTATATTT+TGG | + | chr3_4:65265941-65265960 | None:intergenic | 30.0% |
| GACAATCAAATCAATAACAC+GGG | + | chr3_4:65266000-65266019 | None:intergenic | 30.0% | |
| GGACAATCAAATCAATAACA+CGG | + | chr3_4:65266001-65266020 | None:intergenic | 30.0% | |
| AATGAGATTAGAGTGAGGTT+TGG | + | chr3_4:65263517-65263536 | None:intergenic | 35.0% | |
| ACTCAACACTACTATCTCAA+TGG | - | chr3_4:65263560-65263579 | Msa0514540:three_prime_UTR | 35.0% | |
| CTCAACACTACTATCTCAAT+GGG | - | chr3_4:65263561-65263580 | Msa0514540:three_prime_UTR | 35.0% | |
| ACGGTGATTAAGAGAGAAAA+AGG | + | chr3_4:65263617-65263636 | None:intergenic | 35.0% | |
| ATTTGGAAGAATTGGACGAT+TGG | - | chr3_4:65263836-65263855 | Msa0514540:CDS | 35.0% | |
| !!! | GTGGAAGCATTTTGAACTTA+AGG | - | chr3_4:65264061-65264080 | Msa0514540:intron | 35.0% |
| TTCTTTCTCACCAAAGAGAA+GGG | + | chr3_4:65264102-65264121 | None:intergenic | 35.0% | |
| !!! | GAGAAAGAAGTTGCTGTTTT+CGG | - | chr3_4:65264113-65264132 | Msa0514540:intron | 35.0% |
| GATTACGTTATTGAGTCAAC+TGG | - | chr3_4:65264287-65264306 | Msa0514540:intron | 35.0% | |
| CTACTCAATATCACTGTAAC+AGG | + | chr3_4:65264596-65264615 | None:intergenic | 35.0% | |
| TTTGGATTGTTGTGGTGATT+AGG | - | chr3_4:65264675-65264694 | Msa0514540:CDS | 35.0% | |
| TTGGATTGTTGTGGTGATTA+GGG | - | chr3_4:65264676-65264695 | Msa0514540:CDS | 35.0% | |
| AGCAGAAATAACAACCTTCT+TGG | + | chr3_4:65264707-65264726 | None:intergenic | 35.0% | |
| TTGGAAACAATGTTAAGCTC+TGG | + | chr3_4:65264784-65264803 | None:intergenic | 35.0% | |
| TTGAAAAAAAACCTTGGCGA+GGG | + | chr3_4:65264836-65264855 | None:intergenic | 35.0% | |
| ATTGAAAAAAAACCTTGGCG+AGG | + | chr3_4:65264837-65264856 | None:intergenic | 35.0% | |
| ! | CCCTTTTGTAGCATGTTTAT+TGG | - | chr3_4:65264858-65264877 | Msa0514540:intron | 35.0% |
| CAGGTTATTAATGACCGATT+TGG | - | chr3_4:65264934-65264953 | Msa0514540:intron | 35.0% | |
| ! | ATTTGAAACATACAGGCTGT+AGG | - | chr3_4:65265361-65265380 | Msa0514540:intron | 35.0% |
| ! | AAAGTGCTTCCAGTATTGAA+CGG | - | chr3_4:65265385-65265404 | Msa0514540:intron | 35.0% |
| GTCAATTTACCGTTCAATAC+TGG | + | chr3_4:65265397-65265416 | None:intergenic | 35.0% | |
| GTATTGAACGGTAAATTGAC+CGG | - | chr3_4:65265397-65265416 | Msa0514540:intron | 35.0% | |
| !! | GTGGTATCTACTGACTTTAT+TGG | - | chr3_4:65265664-65265683 | Msa0514540:intron | 35.0% |
| ATTCAAAGCAATTCCAGCTT+TGG | + | chr3_4:65265818-65265837 | None:intergenic | 35.0% | |
| ACTTTGTGAAACTCGTTTCT+TGG | - | chr3_4:65265842-65265861 | Msa0514540:intron | 35.0% | |
| TTTCTTGGTATGACAACGAA+TGG | - | chr3_4:65265857-65265876 | Msa0514540:intron | 35.0% | |
| TTCTTGGTATGACAACGAAT+GGG | - | chr3_4:65265858-65265877 | Msa0514540:intron | 35.0% | |
| ! | TGTTCCAAATTTTGTCTCAC+TGG | - | chr3_4:65266068-65266087 | Msa0514540:intron | 35.0% |
| ATCTCCAGTGAGACAAAATT+TGG | + | chr3_4:65266075-65266094 | None:intergenic | 35.0% | |
| !!! | TACCTACTCTTGTTTTAGAG+AGG | - | chr3_4:65266215-65266234 | Msa0514540:intron | 35.0% |
| !!! | ACCTACTCTTGTTTTAGAGA+GGG | - | chr3_4:65266216-65266235 | Msa0514540:intron | 35.0% |
| TAGCATCTGACAAGAAGATC+AGG | - | chr3_4:65263684-65263703 | Msa0514540:three_prime_UTR | 40.0% | |
| TCTGACAAGAAGATCAGGAT+CGG | - | chr3_4:65263689-65263708 | Msa0514540:three_prime_UTR | 40.0% | |
| AAGATCAGGATCGGAATCAA+CGG | - | chr3_4:65263698-65263717 | Msa0514540:three_prime_UTR | 40.0% | |
| AAACAACGAGATTCGAACTC+TGG | - | chr3_4:65263968-65263987 | Msa0514540:intron | 40.0% | |
| CTTCTTTCTCACCAAAGAGA+AGG | + | chr3_4:65264103-65264122 | None:intergenic | 40.0% | |
| TCTGAATAATAGGAACCCTG+AGG | - | chr3_4:65264238-65264257 | Msa0514540:CDS | 40.0% | |
| ! | AACTGGTGTTTTCACTGACA+AGG | - | chr3_4:65264304-65264323 | Msa0514540:intron | 40.0% |
| ATTGTCTCACTCAGTAGAGT+CGG | + | chr3_4:65264427-65264446 | None:intergenic | 40.0% | |
| AACATAGGTGCATCTTTGCT+GGG | + | chr3_4:65264730-65264749 | None:intergenic | 40.0% | |
| AAACATAGGTGCATCTTTGC+TGG | + | chr3_4:65264731-65264750 | None:intergenic | 40.0% | |
| !! | GATGCACCTATGTTTGTTGT+TGG | - | chr3_4:65264736-65264755 | Msa0514540:intron | 40.0% |
| !! | TGTTGTTGGTGTTAACGAGA+AGG | - | chr3_4:65264750-65264769 | Msa0514540:intron | 40.0% |
| GTTAGTAGTGCAACTAGCAT+TGG | + | chr3_4:65264803-65264822 | None:intergenic | 40.0% | |
| TGAAAAAAAACCTTGGCGAG+GGG | + | chr3_4:65264835-65264854 | None:intergenic | 40.0% | |
| GTCAACAACTGAAACATCGA+CGG | + | chr3_4:65265443-65265462 | None:intergenic | 40.0% | |
| CAGTTGTTGACCTTACTGTA+AGG | - | chr3_4:65265452-65265471 | Msa0514540:intron | 40.0% | |
| TCTTCTCAAGCCTTACAGTA+AGG | + | chr3_4:65265465-65265484 | None:intergenic | 40.0% | |
| TGAAATTGCAAAAACCAGGG+AGG | - | chr3_4:65265594-65265613 | Msa0514540:CDS | 40.0% | |
| GGGTTATACTGAAGATGATG+TGG | - | chr3_4:65265645-65265664 | Msa0514540:intron | 40.0% | |
| TCTTGGTATGACAACGAATG+GGG | - | chr3_4:65265859-65265878 | Msa0514540:intron | 40.0% | |
| TGGATTGAATAGACGGCTTT+AGG | - | chr3_4:65266188-65266207 | Msa0514540:intron | 40.0% | |
| !! | TCCCTCTCTAAAACAAGAGT+AGG | + | chr3_4:65266220-65266239 | None:intergenic | 40.0% |
| GAGATTAGAGTGAGGTTTGG+TGG | + | chr3_4:65263514-65263533 | None:intergenic | 45.0% | |
| GACACTAAGACCCTTCTCTT+TGG | - | chr3_4:65264089-65264108 | Msa0514540:intron | 45.0% | |
| !!! | AAGTTGCTGTTTTCGGAACC+AGG | - | chr3_4:65264120-65264139 | Msa0514540:intron | 45.0% |
| ! | TCTGAATCTCATGCCCCTTT+TGG | - | chr3_4:65264167-65264186 | Msa0514540:intron | 45.0% |
| ACTCAGTAGAGTCGGATACA+TGG | + | chr3_4:65264419-65264438 | None:intergenic | 45.0% | |
| GATTGTTGTGGTGATTAGGG+TGG | - | chr3_4:65264679-65264698 | Msa0514540:CDS | 45.0% | |
| !! | TGACCGATTTGGAATCGTTG+AGG | - | chr3_4:65264945-65264964 | Msa0514540:intron | 45.0% |
| !! | GACCGATTTGGAATCGTTGA+GGG | - | chr3_4:65264946-65264965 | Msa0514540:intron | 45.0% |
| GACCCTCAACGATTCCAAAT+CGG | + | chr3_4:65264951-65264970 | None:intergenic | 45.0% | |
| ACCATCAACAGTCTTCTGAG+TGG | + | chr3_4:65265173-65265192 | None:intergenic | 45.0% | |
| !! | TGTTGATGGTCCATCAAGCA+AGG | - | chr3_4:65265183-65265202 | Msa0514540:intron | 45.0% |
| CAACTGAAACATCGACGGTT+GGG | + | chr3_4:65265438-65265457 | None:intergenic | 45.0% | |
| ACAACTGAAACATCGACGGT+TGG | + | chr3_4:65265439-65265458 | None:intergenic | 45.0% | |
| AGCAACCTATGAGCAGATCA+AGG | - | chr3_4:65265486-65265505 | Msa0514540:intron | 45.0% | |
| AAAAACCAGGGAGGAATCAG+AGG | - | chr3_4:65265603-65265622 | Msa0514540:CDS | 45.0% | |
| AAAACCAGGGAGGAATCAGA+GGG | - | chr3_4:65265604-65265623 | Msa0514540:CDS | 45.0% | |
| !!! | GGCAAGCTGAAGGGTATTTT+GGG | - | chr3_4:65265625-65265644 | Msa0514540:intron | 45.0% |
| CTGACTTTATTGGCGATAGC+AGG | - | chr3_4:65265674-65265693 | Msa0514540:intron | 45.0% | |
| TTGGCGATAGCAGGTAATGT+TGG | - | chr3_4:65265683-65265702 | Msa0514540:intron | 45.0% | |
| AGCATCTTTGATGCCAAAGC+TGG | - | chr3_4:65265802-65265821 | Msa0514540:CDS | 45.0% | |
| ATGACAACGAATGGGGTTAC+AGG | - | chr3_4:65265866-65265885 | Msa0514540:intron | 45.0% | |
| GATTGTCCACATTGCTTCTG+TGG | - | chr3_4:65266013-65266032 | Msa0514540:CDS | 45.0% | |
| ATCAAGCCACAGAAGCAATG+TGG | + | chr3_4:65266022-65266041 | None:intergenic | 45.0% | |
| AGTCTGAGCTTGGATTGCAT+TGG | - | chr3_4:65266043-65266062 | Msa0514540:intron | 45.0% | |
| AAGAGGATCGCAAAGAGACA+TGG | + | chr3_4:65266277-65266296 | None:intergenic | 45.0% | |
| ATGACACTGTTCACGGTCAG+TGG | - | chr3_4:65264042-65264061 | Msa0514540:CDS | 50.0% | |
| GAACCCTGAGGAGATTCCAT+GGG | - | chr3_4:65264250-65264269 | Msa0514540:intron | 50.0% | |
| AACCCTGAGGAGATTCCATG+GGG | - | chr3_4:65264251-65264270 | Msa0514540:intron | 50.0% | |
| CAAAGCTGCTGCTCACTTGA+AGG | - | chr3_4:65264328-65264347 | Msa0514540:intron | 50.0% | |
| ! | TGATTAGGGTGGTGCCAAGA+AGG | - | chr3_4:65264690-65264709 | Msa0514540:intron | 50.0% |
| GCCACTCAGAAGACTGTTGA+TGG | - | chr3_4:65265169-65265188 | Msa0514540:intron | 50.0% | |
| ATGGTCCATCAAGCAAGGAC+TGG | - | chr3_4:65265188-65265207 | Msa0514540:intron | 50.0% | |
| GCTGCTGGGAATGATGTTGA+AGG | + | chr3_4:65265233-65265252 | None:intergenic | 50.0% | |
| AACATCATTCCCAGCAGCAC+TGG | - | chr3_4:65265235-65265254 | Msa0514540:intron | 50.0% | |
| TGGGACACGGAATGACATTC+CGG | + | chr3_4:65265419-65265438 | None:intergenic | 50.0% | |
| AAACATCGACGGTTGGGACA+CGG | + | chr3_4:65265432-65265451 | None:intergenic | 50.0% | |
| GAATCAGAGGGCAAGCTGAA+GGG | - | chr3_4:65265616-65265635 | Msa0514540:intron | 50.0% | |
| !!! | GGGCAAGCTGAAGGGTATTT+TGG | - | chr3_4:65265624-65265643 | Msa0514540:intron | 50.0% |
| TGGCTTGATGAGTCTGAGCT+TGG | - | chr3_4:65266033-65266052 | Msa0514540:intron | 50.0% | |
| GGAACCCTGAGGAGATTCCA+TGG | - | chr3_4:65264249-65264268 | Msa0514540:intron | 55.0% | |
| CACCCCATGGAATCTCCTCA+GGG | + | chr3_4:65264256-65264275 | None:intergenic | 55.0% | |
| TCACCCCATGGAATCTCCTC+AGG | + | chr3_4:65264257-65264276 | None:intergenic | 55.0% | |
| TGAGGAGATTCCATGGGGTG+AGG | - | chr3_4:65264256-65264275 | Msa0514540:intron | 55.0% | |
| GAGATTCCATGGGGTGAGGT+TGG | - | chr3_4:65264260-65264279 | Msa0514540:intron | 55.0% | |
| ACCACAGTTCACGCCATCAC+AGG | - | chr3_4:65264976-65264995 | Msa0514540:intron | 55.0% | |
| ! | ACCTGTGATGGCGTGAACTG+TGG | + | chr3_4:65264980-65264999 | None:intergenic | 55.0% |
| CCTCTCCAGTCCTTGCTTGA+TGG | + | chr3_4:65265196-65265215 | None:intergenic | 55.0% | |
| CCATCAAGCAAGGACTGGAG+AGG | - | chr3_4:65265193-65265212 | Msa0514540:intron | 55.0% | |
| TCAAGCAAGGACTGGAGAGG+TGG | - | chr3_4:65265196-65265215 | Msa0514540:intron | 55.0% | |
| GGCAGCCTTGATCTGCTCAT+AGG | + | chr3_4:65265494-65265513 | None:intergenic | 55.0% | |
| GGAATCAGAGGGCAAGCTGA+AGG | - | chr3_4:65265615-65265634 | Msa0514540:intron | 55.0% | |
| TCAGCTCCAACCTCACCCCA+TGG | + | chr3_4:65264269-65264288 | None:intergenic | 60.0% | |
| AAACCTTGGCGAGGGGAGCA+AGG | + | chr3_4:65264828-65264847 | None:intergenic | 60.0% | |
| ! | TTGGCAGCTCCAGTGCTGCT+GGG | + | chr3_4:65265247-65265266 | None:intergenic | 60.0% |
| CTTGCCCTCTGATTCCTCCC+TGG | + | chr3_4:65265611-65265630 | None:intergenic | 60.0% | |
| CTTGGCAGCTCCAGTGCTGC+TGG | + | chr3_4:65265248-65265267 | None:intergenic | 65.0% | |
| ! | CAGCAGCACTGGAGCTGCCA+AGG | - | chr3_4:65265246-65265265 | Msa0514540:intron | 65.0% |
| CTGCCTTGCTCCCCTCGCCA+AGG | - | chr3_4:65264822-65264841 | Msa0514540:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 65263511 | 65266362 | 65263511 | ID=Msa0514540;Name=Msa0514540 |
| chr3_4 | mRNA | 65263511 | 65266362 | 65263511 | ID=Msa0514540-mRNA-1;Parent=Msa0514540;Name=Msa0514540-mRNA-1;_AED=0.18;_eAED=0.18;_QI=68|1|1|1|0.91|0.84|13|302|340 |
| chr3_4 | exon | 65263511 | 65263663 | 65263511 | ID=Msa0514540-mRNA-1:exon:16627;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65263684 | 65263878 | 65263684 | ID=Msa0514540-mRNA-1:exon:16626;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65263986 | 65264075 | 65263986 | ID=Msa0514540-mRNA-1:exon:16625;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65264178 | 65264261 | 65264178 | ID=Msa0514540-mRNA-1:exon:16624;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65264355 | 65264497 | 65264355 | ID=Msa0514540-mRNA-1:exon:16623;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65264606 | 65264703 | 65264606 | ID=Msa0514540-mRNA-1:exon:16622;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65264876 | 65264936 | 65264876 | ID=Msa0514540-mRNA-1:exon:16621;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65265030 | 65265176 | 65265030 | ID=Msa0514540-mRNA-1:exon:16620;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65265524 | 65265623 | 65265524 | ID=Msa0514540-mRNA-1:exon:16619;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65265732 | 65265847 | 65265732 | ID=Msa0514540-mRNA-1:exon:16618;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65265938 | 65266038 | 65265938 | ID=Msa0514540-mRNA-1:exon:16617;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65266154 | 65266186 | 65266154 | ID=Msa0514540-mRNA-1:exon:16616;Parent=Msa0514540-mRNA-1 |
| chr3_4 | exon | 65266291 | 65266362 | 65266291 | ID=Msa0514540-mRNA-1:exon:16615;Parent=Msa0514540-mRNA-1 |
| chr3_4 | five_prime_UTR | 65266295 | 65266362 | 65266295 | ID=Msa0514540-mRNA-1:five_prime_utr;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65266291 | 65266294 | 65266291 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65266154 | 65266186 | 65266154 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65265938 | 65266038 | 65265938 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65265732 | 65265847 | 65265732 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65265524 | 65265623 | 65265524 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65265030 | 65265176 | 65265030 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65264876 | 65264936 | 65264876 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65264606 | 65264703 | 65264606 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65264355 | 65264497 | 65264355 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65264178 | 65264261 | 65264178 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65263986 | 65264075 | 65263986 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | CDS | 65263833 | 65263878 | 65263833 | ID=Msa0514540-mRNA-1:cds;Parent=Msa0514540-mRNA-1 |
| chr3_4 | three_prime_UTR | 65263684 | 65263832 | 65263684 | ID=Msa0514540-mRNA-1:three_prime_utr;Parent=Msa0514540-mRNA-1 |
| chr3_4 | three_prime_UTR | 65263511 | 65263663 | 65263511 | ID=Msa0514540-mRNA-1:three_prime_utr;Parent=Msa0514540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
