Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224780 | XP_003597669.1 | 93.066 | 274 | 13 | 6 | 1 | 273 | 1 | 269 | 1.46e-169 | 479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224780 | sp|Q8LAL2|IAA26_ARATH | 54.753 | 263 | 90 | 7 | 11 | 271 | 32 | 267 | 5.76e-83 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224780 | G7IHZ1 | 93.066 | 274 | 13 | 6 | 1 | 273 | 1 | 269 | 6.96e-170 | 479 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0224780 | TR | AUX/IAA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0224780 | 0.815391 | 9.469427e-52 | -8.615850e-47 |
| Msa0003890 | Msa0224780 | 0.827591 | 1.438016e-54 | -8.615850e-47 |
| Msa0006110 | Msa0224780 | 0.848697 | 5.195292e-60 | -8.615850e-47 |
| Msa0017510 | Msa0224780 | 0.834803 | 2.426471e-56 | -8.615850e-47 |
| Msa0024550 | Msa0224780 | 0.829282 | 5.617766e-55 | -8.615850e-47 |
| Msa0029310 | Msa0224780 | 0.810820 | 9.532274e-51 | -8.615850e-47 |
| Msa0075470 | Msa0224780 | 0.817466 | 3.249561e-52 | -8.615850e-47 |
| Msa0080090 | Msa0224780 | 0.822986 | 1.765709e-53 | -8.615850e-47 |
| Msa0081520 | Msa0224780 | 0.811971 | 5.359875e-51 | -8.615850e-47 |
| Msa0089630 | Msa0224780 | 0.809851 | 1.542431e-50 | -8.615850e-47 |
| Msa0092790 | Msa0224780 | 0.801250 | 9.837097e-49 | -8.615850e-47 |
| Msa0114060 | Msa0224780 | 0.802071 | 6.675640e-49 | -8.615850e-47 |
| Msa0120400 | Msa0224780 | 0.827175 | 1.809244e-54 | -8.615850e-47 |
| Msa0129940 | Msa0224780 | 0.808593 | 2.869424e-50 | -8.615850e-47 |
| Msa0131900 | Msa0224780 | 0.801608 | 8.309143e-49 | -8.615850e-47 |
| Msa0138370 | Msa0224780 | 0.810537 | 1.097282e-50 | -8.615850e-47 |
| Msa0139060 | Msa0224780 | 0.802486 | 5.484353e-49 | -8.615850e-47 |
| Msa0157290 | Msa0224780 | 0.835491 | 1.627234e-56 | -8.615850e-47 |
| Msa0164330 | Msa0224780 | 0.821718 | 3.478628e-53 | -8.615850e-47 |
| Msa0175730 | Msa0224780 | 0.814905 | 1.214070e-51 | -8.615850e-47 |
| Msa0186010 | Msa0224780 | 0.802196 | 6.291758e-49 | -8.615850e-47 |
| Msa0212990 | Msa0224780 | 0.817768 | 2.778308e-52 | -8.615850e-47 |
| Msa0218810 | Msa0224780 | 0.806253 | 8.996341e-50 | -8.615850e-47 |
| Msa0224780 | Msa0225100 | 0.810809 | 9.582452e-51 | -8.615850e-47 |
| Msa0224780 | Msa0225680 | 0.801716 | 7.897145e-49 | -8.615850e-47 |
| Msa0224780 | Msa0225860 | 0.811404 | 7.119723e-51 | -8.615850e-47 |
| Msa0224780 | Msa0237310 | 0.804805 | 1.811002e-49 | -8.615850e-47 |
| Msa0224780 | Msa0243100 | 0.800243 | 1.579068e-48 | -8.615850e-47 |
| Msa0224780 | Msa0244640 | 0.807368 | 5.231581e-50 | -8.615850e-47 |
| Msa0224780 | Msa0244940 | 0.803783 | 2.956339e-49 | -8.615850e-47 |
| Msa0224780 | Msa0258310 | 0.829188 | 5.919625e-55 | -8.615850e-47 |
| Msa0224780 | Msa0259500 | 0.834327 | 3.195560e-56 | -8.615850e-47 |
| Msa0224780 | Msa0261340 | 0.834452 | 2.973189e-56 | -8.615850e-47 |
| Msa0224780 | Msa0266180 | 0.811932 | 5.465731e-51 | -8.615850e-47 |
| Msa0224780 | Msa0274730 | 0.803555 | 3.296337e-49 | -8.615850e-47 |
| Msa0224780 | Msa0287740 | 0.820373 | 7.098811e-53 | -8.615850e-47 |
| Msa0224780 | Msa0287780 | 0.801102 | 1.054751e-48 | -8.615850e-47 |
| Msa0224780 | Msa0297790 | 0.826085 | 3.292578e-54 | -8.615850e-47 |
| Msa0224780 | Msa0300270 | 0.815923 | 7.207560e-52 | -8.615850e-47 |
| Msa0224780 | Msa0302170 | 0.804205 | 2.415756e-49 | -8.615850e-47 |
| Msa0224780 | Msa0305700 | 0.830140 | 3.471793e-55 | -8.615850e-47 |
| Msa0224780 | Msa0315530 | 0.812067 | 5.109257e-51 | -8.615850e-47 |
| Msa0224780 | Msa0330340 | 0.843170 | 1.652313e-58 | -8.615850e-47 |
| Msa0224780 | Msa0335800 | 0.805515 | 1.286066e-49 | -8.615850e-47 |
| Msa0224780 | Msa0336320 | 0.808362 | 3.214109e-50 | -8.615850e-47 |
| Msa0224780 | Msa0337700 | 0.820608 | 6.270569e-53 | -8.615850e-47 |
| Msa0224780 | Msa0340450 | 0.807345 | 5.288956e-50 | -8.615850e-47 |
| Msa0224780 | Msa0340500 | 0.803863 | 2.845562e-49 | -8.615850e-47 |
| Msa0224780 | Msa0341540 | 0.833776 | 4.392002e-56 | -8.615850e-47 |
| Msa0224780 | Msa0345970 | 0.813189 | 2.902797e-51 | -8.615850e-47 |
| Msa0224780 | Msa0357290 | 0.825269 | 5.139472e-54 | -8.615850e-47 |
| Msa0224780 | Msa0357340 | 0.811654 | 6.284978e-51 | -8.615850e-47 |
| Msa0224780 | Msa0358960 | 0.803907 | 2.785756e-49 | -8.615850e-47 |
| Msa0224780 | Msa0360210 | 0.829448 | 5.118647e-55 | -8.615850e-47 |
| Msa0224780 | Msa0363790 | 0.819594 | 1.069899e-52 | -8.615850e-47 |
| Msa0224780 | Msa0367870 | 0.833506 | 5.129155e-56 | -8.615850e-47 |
| Msa0224780 | Msa0376350 | 0.832731 | 7.998322e-56 | -8.615850e-47 |
| Msa0224780 | Msa0378720 | 0.806057 | 9.894792e-50 | -8.615850e-47 |
| Msa0224780 | Msa0381610 | -0.821317 | 4.305544e-53 | -8.615850e-47 |
| Msa0224780 | Msa0388960 | 0.849241 | 3.668015e-60 | -8.615850e-47 |
| Msa0224780 | Msa0392510 | 0.838233 | 3.247280e-57 | -8.615850e-47 |
| Msa0224780 | Msa0393080 | 0.804087 | 2.556651e-49 | -8.615850e-47 |
| Msa0224780 | Msa0395790 | 0.801600 | 8.342047e-49 | -8.615850e-47 |
| Msa0224780 | Msa0406770 | 0.825980 | 3.485806e-54 | -8.615850e-47 |
| Msa0224780 | Msa0410650 | 0.862445 | 5.041941e-64 | -8.615850e-47 |
| Msa0224780 | Msa0411390 | 0.807109 | 5.935301e-50 | -8.615850e-47 |
| Msa0224780 | Msa0417210 | 0.819935 | 8.941287e-53 | -8.615850e-47 |
| Msa0224780 | Msa0417270 | 0.802654 | 5.063876e-49 | -8.615850e-47 |
| Msa0224780 | Msa0417880 | 0.803959 | 2.717681e-49 | -8.615850e-47 |
| Msa0224780 | Msa0418190 | 0.800363 | 1.492737e-48 | -8.615850e-47 |
| Msa0224780 | Msa0422850 | 0.839184 | 1.844092e-57 | -8.615850e-47 |
| Msa0224780 | Msa0422930 | 0.844253 | 8.476412e-59 | -8.615850e-47 |
| Msa0224780 | Msa0424790 | 0.831729 | 1.415212e-55 | -8.615850e-47 |
| Msa0224780 | Msa0425170 | 0.811764 | 5.945303e-51 | -8.615850e-47 |
| Msa0224780 | Msa0436760 | 0.810115 | 1.353519e-50 | -8.615850e-47 |
| Msa0224780 | Msa0439970 | 0.803447 | 3.471310e-49 | -8.615850e-47 |
| Msa0224780 | Msa0440750 | 0.835073 | 2.074044e-56 | -8.615850e-47 |
| Msa0224780 | Msa0453000 | 0.827108 | 1.876559e-54 | -8.615850e-47 |
| Msa0224780 | Msa0464680 | 0.843240 | 1.582893e-58 | -8.615850e-47 |
| Msa0224780 | Msa0465940 | 0.836351 | 9.848224e-57 | -8.615850e-47 |
| Msa0224780 | Msa0479170 | 0.812995 | 3.201652e-51 | -8.615850e-47 |
| Msa0224780 | Msa0479660 | 0.803011 | 4.271972e-49 | -8.615850e-47 |
| Msa0224780 | Msa0481530 | 0.806859 | 6.702968e-50 | -8.615850e-47 |
| Msa0224780 | Msa0488560 | 0.814913 | 1.209205e-51 | -8.615850e-47 |
| Msa0224780 | Msa0490730 | -0.814640 | 1.390018e-51 | -8.615850e-47 |
| Msa0224780 | Msa0495320 | 0.810140 | 1.336443e-50 | -8.615850e-47 |
| Msa0224780 | Msa0495330 | 0.810102 | 1.361902e-50 | -8.615850e-47 |
| Msa0224780 | Msa0507680 | 0.843142 | 1.680657e-58 | -8.615850e-47 |
| Msa0224780 | Msa0516170 | 0.826937 | 2.061900e-54 | -8.615850e-47 |
| Msa0224780 | Msa0520940 | 0.808806 | 2.584879e-50 | -8.615850e-47 |
| Msa0224780 | Msa0528950 | 0.810571 | 1.079053e-50 | -8.615850e-47 |
| Msa0224780 | Msa0529890 | 0.823816 | 1.129837e-53 | -8.615850e-47 |
| Msa0224780 | Msa0544660 | 0.800207 | 1.605731e-48 | -8.615850e-47 |
| Msa0224780 | Msa0572840 | 0.812456 | 4.201870e-51 | -8.615850e-47 |
| Msa0224780 | Msa0574390 | 0.813121 | 3.005268e-51 | -8.615850e-47 |
| Msa0224780 | Msa0574890 | 0.836370 | 9.738473e-57 | -8.615850e-47 |
| Msa0224780 | Msa0585560 | 0.818071 | 2.373228e-52 | -8.615850e-47 |
| Msa0224780 | Msa0600700 | 0.805463 | 1.318895e-49 | -8.615850e-47 |
| Msa0224780 | Msa0602240 | 0.806192 | 9.267085e-50 | -8.615850e-47 |
| Msa0224780 | Msa0602250 | 0.802388 | 5.745132e-49 | -8.615850e-47 |
| Msa0224780 | Msa0616070 | 0.873465 | 1.439622e-67 | -8.615850e-47 |
| Msa0224780 | Msa0625720 | 0.823020 | 1.734344e-53 | -8.615850e-47 |
| Msa0224780 | Msa0626410 | 0.805096 | 1.574266e-49 | -8.615850e-47 |
| Msa0224780 | Msa0629450 | 0.808683 | 2.745844e-50 | -8.615850e-47 |
| Msa0224780 | Msa0637900 | 0.813129 | 2.991909e-51 | -8.615850e-47 |
| Msa0224780 | Msa0638260 | 0.828223 | 1.013099e-54 | -8.615850e-47 |
| Msa0224780 | Msa0661650 | 0.817151 | 3.825688e-52 | -8.615850e-47 |
| Msa0224780 | Msa0663390 | 0.818930 | 1.515521e-52 | -8.615850e-47 |
| Msa0224780 | Msa0667050 | 0.801727 | 7.854949e-49 | -8.615850e-47 |
| Msa0224780 | Msa0669320 | 0.826333 | 2.872916e-54 | -8.615850e-47 |
| Msa0224780 | Msa0679750 | 0.801128 | 1.041974e-48 | -8.615850e-47 |
| Msa0224780 | Msa0683510 | 0.803378 | 3.586853e-49 | -8.615850e-47 |
| Msa0224780 | Msa0723990 | 0.817640 | 2.969113e-52 | -8.615850e-47 |
| Msa0224780 | Msa0729720 | 0.824309 | 8.655827e-54 | -8.615850e-47 |
| Msa0224780 | Msa0730430 | 0.814332 | 1.626058e-51 | -8.615850e-47 |
| Msa0224780 | Msa0731940 | 0.819371 | 1.203226e-52 | -8.615850e-47 |
| Msa0224780 | Msa0733390 | 0.809202 | 2.125825e-50 | -8.615850e-47 |
| Msa0224780 | Msa0736600 | 0.813953 | 1.971495e-51 | -8.615850e-47 |
| Msa0224780 | Msa0738340 | 0.804828 | 1.790813e-49 | -8.615850e-47 |
| Msa0224780 | Msa0740510 | 0.815268 | 1.008541e-51 | -8.615850e-47 |
| Msa0224780 | Msa0756460 | 0.807181 | 5.730785e-50 | -8.615850e-47 |
| Msa0224780 | Msa0756540 | 0.830959 | 2.189441e-55 | -8.615850e-47 |
| Msa0224780 | Msa0760130 | 0.808413 | 3.135483e-50 | -8.615850e-47 |
| Msa0224780 | Msa0762970 | 0.815093 | 1.102758e-51 | -8.615850e-47 |
| Msa0224780 | Msa0764570 | 0.807495 | 4.914993e-50 | -8.615850e-47 |
| Msa0224780 | Msa0769180 | 0.811985 | 5.323382e-51 | -8.615850e-47 |
| Msa0224780 | Msa0780270 | 0.806086 | 9.758583e-50 | -8.615850e-47 |
| Msa0224780 | Msa0797770 | 0.810820 | 9.530551e-51 | -8.615850e-47 |
| Msa0224780 | Msa0810220 | 0.802096 | 6.595838e-49 | -8.615850e-47 |
| Msa0224780 | Msa0815960 | 0.800066 | 1.715813e-48 | -8.615850e-47 |
| Msa0224780 | Msa0816150 | 0.800950 | 1.133077e-48 | -8.615850e-47 |
| Msa0224780 | Msa0816710 | 0.834667 | 2.624694e-56 | -8.615850e-47 |
| Msa0224780 | Msa0820770 | 0.817646 | 2.960301e-52 | -8.615850e-47 |
| Msa0224780 | Msa0824660 | 0.800350 | 1.501797e-48 | -8.615850e-47 |
| Msa0224780 | Msa0828560 | 0.803558 | 3.291538e-49 | -8.615850e-47 |
| Msa0224780 | Msa0832340 | 0.820226 | 7.672599e-53 | -8.615850e-47 |
| Msa0224780 | Msa0835230 | 0.819369 | 1.204015e-52 | -8.615850e-47 |
| Msa0224780 | Msa0844490 | 0.821304 | 4.335413e-53 | -8.615850e-47 |
| Msa0224780 | Msa0846880 | 0.807293 | 5.426696e-50 | -8.615850e-47 |
| Msa0224780 | Msa0861090 | 0.820930 | 5.287795e-53 | -8.615850e-47 |
| Msa0224780 | Msa0861850 | 0.811771 | 5.925964e-51 | -8.615850e-47 |
| Msa0224780 | Msa0875290 | 0.820723 | 5.900208e-53 | -8.615850e-47 |
| Msa0224780 | Msa0880140 | 0.828432 | 9.021870e-55 | -8.615850e-47 |
| Msa0224780 | Msa0896410 | 0.800004 | 1.765814e-48 | -8.615850e-47 |
| Msa0224780 | Msa0897330 | 0.819322 | 1.234558e-52 | -8.615850e-47 |
| Msa0224780 | Msa0898750 | 0.805181 | 1.510729e-49 | -8.615850e-47 |
| Msa0224780 | Msa0899750 | 0.816705 | 4.818192e-52 | -8.615850e-47 |
| Msa0224780 | Msa0923030 | 0.800102 | 1.687363e-48 | -8.615850e-47 |
| Msa0224780 | Msa0926890 | 0.806774 | 6.985431e-50 | -8.615850e-47 |
| Msa0224780 | Msa0926900 | 0.827250 | 1.735799e-54 | -8.615850e-47 |
| Msa0224780 | Msa0927090 | 0.823843 | 1.113439e-53 | -8.615850e-47 |
| Msa0224780 | Msa0930830 | -0.803095 | 4.104567e-49 | -8.615850e-47 |
| Msa0224780 | Msa0933100 | 0.810469 | 1.135112e-50 | -8.615850e-47 |
| Msa0224780 | Msa0936220 | 0.823308 | 1.485852e-53 | -8.615850e-47 |
| Msa0224780 | Msa0936390 | 0.805161 | 1.525345e-49 | -8.615850e-47 |
| Msa0224780 | Msa0961610 | 0.804595 | 2.003729e-49 | -8.615850e-47 |
| Msa0224780 | Msa0964840 | 0.818069 | 2.375352e-52 | -8.615850e-47 |
| Msa0224780 | Msa0965610 | 0.839971 | 1.151404e-57 | -8.615850e-47 |
| Msa0224780 | Msa0967380 | 0.844949 | 5.506443e-59 | -8.615850e-47 |
| Msa0224780 | Msa0967870 | 0.819824 | 9.482867e-53 | -8.615850e-47 |
| Msa0224780 | Msa0969520 | 0.814064 | 1.863216e-51 | -8.615850e-47 |
| Msa0224780 | Msa0972100 | 0.814620 | 1.404463e-51 | -8.615850e-47 |
| Msa0224780 | Msa0974080 | 0.828572 | 8.344864e-55 | -8.615850e-47 |
| Msa0224780 | Msa0996330 | 0.807516 | 4.865340e-50 | -8.615850e-47 |
| Msa0224780 | Msa1000170 | 0.806764 | 7.019184e-50 | -8.615850e-47 |
| Msa0224780 | Msa1000290 | 0.814491 | 1.499385e-51 | -8.615850e-47 |
| Msa0224780 | Msa1004550 | 0.825773 | 3.904527e-54 | -8.615850e-47 |
| Msa0224780 | Msa1004600 | 0.803736 | 3.023382e-49 | -8.615850e-47 |
| Msa0224780 | Msa1004840 | 0.806966 | 6.364375e-50 | -8.615850e-47 |
| Msa0224780 | Msa1005870 | 0.814959 | 1.181042e-51 | -8.615850e-47 |
| Msa0224780 | Msa1016320 | 0.838066 | 3.585399e-57 | -8.615850e-47 |
| Msa0224780 | Msa1017430 | 0.806670 | 7.348990e-50 | -8.615850e-47 |
| Msa0224780 | Msa1017750 | 0.800915 | 1.152026e-48 | -8.615850e-47 |
| Msa0224780 | Msa1019000 | 0.832724 | 8.030064e-56 | -8.615850e-47 |
| Msa0224780 | Msa1019150 | 0.837569 | 4.809875e-57 | -8.615850e-47 |
| Msa0224780 | Msa1019430 | 0.817693 | 2.888404e-52 | -8.615850e-47 |
| Msa0224780 | Msa1019470 | 0.826741 | 2.297416e-54 | -8.615850e-47 |
| Msa0224780 | Msa1030970 | 0.802736 | 4.870221e-49 | -8.615850e-47 |
| Msa0224780 | Msa1036710 | -0.801870 | 7.341541e-49 | -8.615850e-47 |
| Msa0224780 | Msa1039020 | 0.801068 | 1.071809e-48 | -8.615850e-47 |
| Msa0224780 | Msa1043130 | -0.813456 | 2.536002e-51 | -8.615850e-47 |
| Msa0224780 | Msa1043370 | 0.823992 | 1.027177e-53 | -8.615850e-47 |
| Msa0224780 | Msa1070010 | 0.843114 | 1.709203e-58 | -8.615850e-47 |
| Msa0224780 | Msa1075540 | 0.802700 | 4.954714e-49 | -8.615850e-47 |
| Msa0224780 | Msa1079590 | 0.814249 | 1.695860e-51 | -8.615850e-47 |
| Msa0224780 | Msa1082500 | 0.805080 | 1.586329e-49 | -8.615850e-47 |
| Msa0224780 | Msa1085200 | 0.865270 | 6.670824e-65 | -8.615850e-47 |
| Msa0224780 | Msa1087650 | 0.802594 | 5.209502e-49 | -8.615850e-47 |
| Msa0224780 | Msa1092010 | 0.810713 | 1.005235e-50 | -8.615850e-47 |
| Msa0224780 | Msa1094200 | 0.810245 | 1.268934e-50 | -8.615850e-47 |
| Msa0224780 | Msa1101090 | 0.810937 | 8.989917e-51 | -8.615850e-47 |
| Msa0224780 | Msa1101710 | 0.815573 | 8.625127e-52 | -8.615850e-47 |
| Msa0224780 | Msa1101720 | 0.808494 | 3.012633e-50 | -8.615850e-47 |
| Msa0224780 | Msa1101760 | 0.803342 | 3.649779e-49 | -8.615850e-47 |
| Msa0224780 | Msa1111380 | 0.802471 | 5.522693e-49 | -8.615850e-47 |
| Msa0224780 | Msa1113170 | 0.834596 | 2.734815e-56 | -8.615850e-47 |
| Msa0224780 | Msa1121490 | 0.816829 | 4.520075e-52 | -8.615850e-47 |
| Msa0224780 | Msa1122520 | 0.801705 | 7.936161e-49 | -8.615850e-47 |
| Msa0224780 | Msa1135470 | 0.813842 | 2.085281e-51 | -8.615850e-47 |
| Msa0224780 | Msa1137570 | 0.820213 | 7.725061e-53 | -8.615850e-47 |
| Msa0224780 | Msa1139890 | 0.801554 | 8.524615e-49 | -8.615850e-47 |
| Msa0224780 | Msa1142020 | 0.805908 | 1.063359e-49 | -8.615850e-47 |
| Msa0224780 | Msa1147740 | 0.832939 | 7.099071e-56 | -8.615850e-47 |
| Msa0224780 | Msa1151910 | 0.831092 | 2.030258e-55 | -8.615850e-47 |
| Msa0224780 | Msa1158310 | 0.803169 | 3.962829e-49 | -8.615850e-47 |
| Msa0224780 | Msa1168160 | 0.808740 | 2.669622e-50 | -8.615850e-47 |
| Msa0224780 | Msa1173100 | 0.805297 | 1.428905e-49 | -8.615850e-47 |
| Msa0224780 | Msa1178180 | 0.817378 | 3.401494e-52 | -8.615850e-47 |
| Msa0224780 | Msa1189070 | 0.824495 | 7.827816e-54 | -8.615850e-47 |
| Msa0224780 | Msa1193170 | 0.808339 | 3.250708e-50 | -8.615850e-47 |
| Msa0224780 | Msa1193290 | 0.808942 | 2.416402e-50 | -8.615850e-47 |
| Msa0224780 | Msa1199570 | 0.825606 | 4.276581e-54 | -8.615850e-47 |
| Msa0224780 | Msa1212940 | 0.815169 | 1.060908e-51 | -8.615850e-47 |
| Msa0224780 | Msa1236410 | 0.808006 | 3.828191e-50 | -8.615850e-47 |
| Msa0224780 | Msa1238820 | 0.811954 | 5.405439e-51 | -8.615850e-47 |
| Msa0224780 | Msa1239920 | 0.820022 | 8.540689e-53 | -8.615850e-47 |
| Msa0224780 | Msa1243490 | 0.818746 | 1.668909e-52 | -8.615850e-47 |
| Msa0224780 | Msa1267770 | 0.811897 | 5.564383e-51 | -8.615850e-47 |
| Msa0224780 | Msa1283860 | 0.807017 | 6.207881e-50 | -8.615850e-47 |
| Msa0224780 | Msa1284550 | 0.821333 | 4.269900e-53 | -8.615850e-47 |
| Msa0224780 | Msa1284680 | 0.808541 | 2.944215e-50 | -8.615850e-47 |
| Msa0224780 | Msa1286800 | 0.800299 | 1.538109e-48 | -8.615850e-47 |
| Msa0224780 | Msa1297230 | 0.812800 | 3.532248e-51 | -8.615850e-47 |
| Msa0224780 | Msa1299960 | 0.804498 | 2.098656e-49 | -8.615850e-47 |
| Msa0224780 | Msa1302830 | 0.817616 | 3.006243e-52 | -8.615850e-47 |
| Msa0224780 | Msa1306850 | 0.813462 | 2.528227e-51 | -8.615850e-47 |
| Msa0224780 | Msa1308380 | 0.829187 | 5.923758e-55 | -8.615850e-47 |
| Msa0224780 | Msa1309030 | 0.816531 | 5.270914e-52 | -8.615850e-47 |
| Msa0224780 | Msa1313150 | 0.841265 | 5.276883e-58 | -8.615850e-47 |
| Msa0224780 | Msa1324500 | 0.813174 | 2.925745e-51 | -8.615850e-47 |
| Msa0224780 | Msa1328710 | 0.823941 | 1.055913e-53 | -8.615850e-47 |
| Msa0224780 | Msa1330420 | 0.825090 | 5.665649e-54 | -8.615850e-47 |
| Msa0224780 | Msa1333480 | 0.806074 | 9.814207e-50 | -8.615850e-47 |
| Msa0224780 | Msa1337880 | 0.800503 | 1.397778e-48 | -8.615850e-47 |
| Msa0224780 | Msa1353470 | 0.802294 | 6.007668e-49 | -8.615850e-47 |
| Msa0224780 | Msa1355450 | 0.821147 | 4.712182e-53 | -8.615850e-47 |
| Msa0224780 | Msa1356830 | 0.804567 | 2.030327e-49 | -8.615850e-47 |
| Msa0224780 | Msa1357790 | 0.806772 | 6.992413e-50 | -8.615850e-47 |
| Msa0224780 | Msa1366340 | 0.813244 | 2.823565e-51 | -8.615850e-47 |
| Msa0224780 | Msa1374470 | 0.838435 | 2.880565e-57 | -8.615850e-47 |
| Msa0224780 | Msa1384750 | 0.832933 | 7.124714e-56 | -8.615850e-47 |
| Msa0224780 | Msa1392240 | 0.800358 | 1.496525e-48 | -8.615850e-47 |
| Msa0224780 | Msa1392910 | 0.805108 | 1.564927e-49 | -8.615850e-47 |
| Msa0224780 | Msa1408620 | -0.802578 | 5.250546e-49 | -8.615850e-47 |
| Msa0224780 | Msa1423880 | 0.835012 | 2.149203e-56 | -8.615850e-47 |
| Msa0224780 | Msa1431430 | 0.808879 | 2.493518e-50 | -8.615850e-47 |
| Msa0224780 | Msa1438250 | 0.805597 | 1.236059e-49 | -8.615850e-47 |
| Msa0224780 | Msa1450100 | 0.801842 | 7.439194e-49 | -8.615850e-47 |
| Msa0224780 | Msa1455460 | 0.815665 | 8.230608e-52 | -8.615850e-47 |
| Msa0224780 | Msa1457040 | 0.816109 | 6.549943e-52 | -8.615850e-47 |
| Msa0224780 | Msa1464810 | 0.801546 | 8.555087e-49 | -8.615850e-47 |
| Msa0224780 | Msa1466540 | 0.810254 | 1.263195e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224780 | MtrunA17_Chr2g0330951 | 93.066 | 274 | 13 | 6 | 1 | 273 | 1 | 269 | 1.34e-173 | 479 |
| Msa0224780 | MtrunA17_Chr8g0340731 | 53.901 | 282 | 98 | 12 | 6 | 269 | 4 | 271 | 6.18e-83 | 250 |
| Msa0224780 | MtrunA17_Chr6g0486121 | 37.805 | 246 | 120 | 8 | 18 | 258 | 21 | 238 | 3.28e-38 | 134 |
| Msa0224780 | MtrunA17_Chr1g0183251 | 40.449 | 178 | 85 | 4 | 97 | 258 | 80 | 252 | 6.35e-38 | 134 |
| Msa0224780 | MtrunA17_Chr5g0411501 | 42.458 | 179 | 80 | 5 | 81 | 258 | 163 | 319 | 5.62e-36 | 131 |
| Msa0224780 | MtrunA17_Chr2g0331411 | 43.429 | 175 | 75 | 5 | 87 | 258 | 157 | 310 | 9.80e-35 | 127 |
| Msa0224780 | MtrunA17_Chr8g0390281 | 44.048 | 168 | 70 | 4 | 100 | 267 | 141 | 284 | 1.37e-34 | 126 |
| Msa0224780 | MtrunA17_Chr1g0184791 | 34.211 | 266 | 137 | 8 | 4 | 267 | 7 | 236 | 1.14e-33 | 122 |
| Msa0224780 | MtrunA17_Chr8g0366881 | 39.899 | 198 | 93 | 6 | 71 | 267 | 167 | 339 | 1.84e-33 | 124 |
| Msa0224780 | MtrunA17_Chr5g0428141 | 42.373 | 177 | 71 | 7 | 95 | 267 | 189 | 338 | 3.09e-32 | 121 |
| Msa0224780 | MtrunA17_Chr1g0190711 | 40.437 | 183 | 88 | 5 | 85 | 267 | 83 | 244 | 9.14e-32 | 117 |
| Msa0224780 | MtrunA17_Chr1g0187921 | 40.361 | 166 | 77 | 5 | 93 | 258 | 77 | 220 | 1.66e-29 | 111 |
| Msa0224780 | MtrunA17_Chr7g0260621 | 34.553 | 246 | 91 | 10 | 18 | 258 | 17 | 197 | 3.14e-29 | 110 |
| Msa0224780 | MtrunA17_Chr1g0166011 | 30.315 | 254 | 108 | 6 | 13 | 266 | 2 | 186 | 6.42e-27 | 103 |
| Msa0224780 | MtrunA17_Chr7g0260641 | 37.356 | 174 | 85 | 4 | 85 | 258 | 85 | 234 | 5.08e-26 | 102 |
| Msa0224780 | MtrunA17_Chr1g0187961 | 36.416 | 173 | 60 | 6 | 88 | 258 | 50 | 174 | 2.53e-25 | 99.0 |
| Msa0224780 | MtrunA17_Chr1g0184801 | 29.630 | 243 | 106 | 8 | 18 | 258 | 18 | 197 | 1.28e-23 | 95.1 |
| Msa0224780 | MtrunA17_Chr7g0270851 | 35.385 | 130 | 62 | 4 | 126 | 253 | 44 | 153 | 3.52e-21 | 87.4 |
| Msa0224780 | MtrunA17_Chr4g0069561 | 40.000 | 105 | 46 | 2 | 152 | 256 | 94 | 181 | 7.10e-21 | 87.4 |
| Msa0224780 | MtrunA17_Chr4g0004181 | 31.737 | 167 | 59 | 4 | 100 | 264 | 55 | 168 | 4.54e-19 | 82.4 |
| Msa0224780 | MtrunA17_Chr1g0193861 | 33.333 | 147 | 67 | 5 | 126 | 262 | 49 | 174 | 7.27e-19 | 81.6 |
| Msa0224780 | MtrunA17_Chr2g0332141 | 39.048 | 105 | 54 | 2 | 154 | 257 | 8 | 103 | 1.76e-18 | 79.3 |
| Msa0224780 | MtrunA17_Chr4g0064131 | 29.114 | 158 | 69 | 4 | 99 | 256 | 92 | 206 | 1.32e-17 | 79.3 |
| Msa0224780 | MtrunA17_Chr3g0137601 | 28.931 | 159 | 75 | 5 | 100 | 258 | 89 | 209 | 5.85e-15 | 72.0 |
| Msa0224780 | MtrunA17_Chr8g0385791 | 31.092 | 119 | 54 | 3 | 155 | 270 | 713 | 806 | 9.10e-13 | 68.2 |
| Msa0224780 | MtrunA17_Chr7g0239061 | 30.357 | 112 | 55 | 1 | 156 | 267 | 574 | 662 | 9.71e-12 | 65.1 |
| Msa0224780 | MtrunA17_Chr1g0209181 | 34.314 | 102 | 49 | 2 | 154 | 255 | 85 | 168 | 3.17e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0224780 | AT3G16500.1 | 54.753 | 263 | 90 | 7 | 11 | 271 | 32 | 267 | 5.86e-84 | 253 |
| Msa0224780 | AT3G16500.2 | 55.378 | 251 | 85 | 5 | 11 | 261 | 32 | 255 | 1.29e-82 | 249 |
| Msa0224780 | AT1G51950.1 | 50.368 | 272 | 80 | 9 | 12 | 271 | 37 | 265 | 5.68e-71 | 219 |
| Msa0224780 | AT5G25890.1 | 37.109 | 256 | 74 | 7 | 13 | 268 | 3 | 171 | 1.88e-39 | 135 |
| Msa0224780 | AT4G28640.3 | 42.246 | 187 | 86 | 6 | 93 | 271 | 76 | 248 | 7.36e-36 | 129 |
| Msa0224780 | AT4G28640.1 | 42.529 | 174 | 80 | 5 | 93 | 258 | 76 | 237 | 1.18e-35 | 128 |
| Msa0224780 | AT4G28640.2 | 42.529 | 174 | 80 | 5 | 93 | 258 | 76 | 237 | 7.05e-35 | 127 |
| Msa0224780 | AT1G04550.2 | 40.860 | 186 | 95 | 5 | 82 | 263 | 50 | 224 | 1.96e-34 | 125 |
| Msa0224780 | AT4G29080.1 | 35.448 | 268 | 130 | 12 | 15 | 258 | 41 | 289 | 3.21e-34 | 126 |
| Msa0224780 | AT2G33310.3 | 43.293 | 164 | 75 | 5 | 100 | 258 | 76 | 226 | 5.69e-34 | 124 |
| Msa0224780 | AT2G33310.1 | 43.293 | 164 | 75 | 5 | 100 | 258 | 76 | 226 | 5.69e-34 | 124 |
| Msa0224780 | AT2G33310.2 | 43.293 | 164 | 75 | 5 | 100 | 258 | 77 | 227 | 5.77e-34 | 124 |
| Msa0224780 | AT2G22670.5 | 42.073 | 164 | 74 | 4 | 95 | 258 | 161 | 303 | 1.95e-31 | 119 |
| Msa0224780 | AT2G22670.2 | 42.073 | 164 | 74 | 4 | 95 | 258 | 161 | 303 | 1.95e-31 | 119 |
| Msa0224780 | AT2G22670.3 | 42.073 | 164 | 74 | 4 | 95 | 258 | 161 | 303 | 2.09e-31 | 119 |
| Msa0224780 | AT2G22670.1 | 42.073 | 164 | 74 | 4 | 95 | 258 | 161 | 303 | 2.09e-31 | 119 |
| Msa0224780 | AT2G22670.4 | 42.073 | 164 | 74 | 4 | 95 | 258 | 178 | 320 | 2.35e-31 | 119 |
| Msa0224780 | AT5G65670.1 | 36.232 | 207 | 107 | 6 | 62 | 267 | 147 | 329 | 3.25e-31 | 119 |
| Msa0224780 | AT5G65670.2 | 37.374 | 198 | 99 | 6 | 62 | 258 | 147 | 320 | 4.85e-31 | 118 |
| Msa0224780 | AT1G04100.1 | 40.123 | 162 | 90 | 4 | 101 | 257 | 95 | 254 | 1.28e-30 | 115 |
| Msa0224780 | AT3G04730.1 | 33.058 | 242 | 132 | 7 | 18 | 258 | 8 | 220 | 2.91e-29 | 111 |
| Msa0224780 | AT1G04250.1 | 32.806 | 253 | 128 | 7 | 15 | 267 | 10 | 220 | 7.16e-29 | 110 |
| Msa0224780 | AT4G14550.1 | 38.857 | 175 | 82 | 5 | 93 | 267 | 70 | 219 | 2.47e-28 | 108 |
| Msa0224780 | AT4G14550.2 | 39.306 | 173 | 80 | 5 | 93 | 265 | 70 | 217 | 2.96e-28 | 108 |
| Msa0224780 | AT3G23050.1 | 39.759 | 166 | 85 | 3 | 93 | 258 | 76 | 226 | 4.17e-28 | 108 |
| Msa0224780 | AT3G15540.1 | 32.824 | 262 | 104 | 9 | 8 | 267 | 2 | 193 | 7.69e-28 | 106 |
| Msa0224780 | AT1G04240.1 | 29.756 | 205 | 92 | 5 | 72 | 266 | 27 | 189 | 6.57e-26 | 101 |
| Msa0224780 | AT1G04240.2 | 29.756 | 205 | 92 | 5 | 72 | 266 | 127 | 289 | 1.19e-24 | 100 |
| Msa0224780 | AT5G43700.1 | 31.868 | 182 | 77 | 4 | 87 | 265 | 47 | 184 | 1.46e-24 | 97.4 |
| Msa0224780 | AT1G52830.1 | 29.762 | 252 | 103 | 10 | 18 | 269 | 12 | 189 | 2.66e-22 | 91.7 |
| Msa0224780 | AT3G23030.1 | 34.356 | 163 | 54 | 5 | 100 | 262 | 61 | 170 | 9.47e-22 | 89.7 |
| Msa0224780 | AT3G23030.2 | 34.356 | 163 | 54 | 5 | 100 | 262 | 148 | 257 | 4.06e-21 | 90.1 |
| Msa0224780 | AT4G14550.3 | 37.584 | 149 | 70 | 4 | 93 | 241 | 70 | 195 | 6.34e-21 | 88.2 |
| Msa0224780 | AT3G23050.2 | 38.255 | 149 | 77 | 3 | 93 | 241 | 76 | 209 | 1.26e-20 | 87.8 |
| Msa0224780 | AT3G17600.1 | 37.736 | 106 | 45 | 2 | 150 | 255 | 70 | 154 | 1.06e-19 | 84.0 |
| Msa0224780 | AT3G62100.1 | 38.614 | 101 | 45 | 2 | 153 | 253 | 83 | 166 | 5.88e-19 | 82.4 |
| Msa0224780 | AT2G46990.1 | 39.604 | 101 | 44 | 2 | 153 | 253 | 85 | 168 | 7.51e-19 | 82.0 |
| Msa0224780 | AT4G14560.1 | 39.048 | 105 | 47 | 3 | 154 | 258 | 76 | 163 | 5.47e-17 | 77.0 |
| Msa0224780 | AT1G15580.1 | 30.380 | 158 | 54 | 4 | 100 | 255 | 54 | 157 | 1.67e-16 | 75.5 |
| Msa0224780 | AT4G32280.1 | 24.405 | 168 | 93 | 3 | 100 | 255 | 95 | 240 | 6.31e-14 | 70.1 |
| Msa0224780 | AT1G04550.1 | 38.938 | 113 | 65 | 3 | 82 | 190 | 50 | 162 | 7.12e-14 | 68.6 |
| Msa0224780 | AT4G23980.2 | 34.545 | 110 | 49 | 1 | 156 | 265 | 525 | 611 | 2.13e-13 | 70.5 |
| Msa0224780 | AT4G23980.1 | 34.545 | 110 | 49 | 1 | 156 | 265 | 527 | 613 | 2.23e-13 | 70.5 |
| Msa0224780 | AT3G62100.2 | 37.079 | 89 | 39 | 2 | 153 | 241 | 83 | 154 | 3.13e-13 | 66.2 |
| Msa0224780 | AT2G46990.2 | 37.079 | 89 | 39 | 2 | 153 | 241 | 85 | 156 | 8.40e-13 | 65.1 |
| Msa0224780 | AT2G46530.2 | 32.381 | 105 | 48 | 1 | 155 | 259 | 406 | 487 | 2.94e-12 | 66.6 |
| Msa0224780 | AT2G46530.1 | 32.381 | 105 | 48 | 1 | 155 | 259 | 493 | 574 | 3.74e-12 | 66.6 |
| Msa0224780 | AT3G23050.3 | 37.895 | 95 | 48 | 1 | 93 | 187 | 76 | 159 | 5.03e-12 | 63.2 |
| Msa0224780 | AT2G46530.3 | 32.381 | 105 | 48 | 1 | 155 | 259 | 514 | 595 | 5.10e-12 | 66.2 |
| Msa0224780 | AT4G32280.2 | 29.126 | 103 | 51 | 1 | 153 | 255 | 118 | 198 | 1.02e-11 | 63.2 |
| Msa0224780 | AT4G14550.4 | 36.842 | 95 | 41 | 2 | 93 | 187 | 70 | 145 | 1.88e-11 | 62.0 |
Find 81 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGATTTGAAATGTTTA+TGG | 0.145528 | 2_1:-74726152 | Msa0224780:three_prime_UTR |
| TGCTGTTGAGTCTGAGATTC+TGG | 0.161798 | 2_1:+74727858 | None:intergenic |
| AACATATATTAATACCTTTA+AGG | 0.163444 | 2_1:+74727658 | None:intergenic |
| GAAAGTGATTACTGGATTAT+TGG | 0.223957 | 2_1:-74727008 | Msa0224780:CDS |
| CTCTTTAGAGGACTCCTTAA+AGG | 0.227479 | 2_1:-74727672 | Msa0224780:intron |
| CAGCTCAAGTTCAGCTCATT+TGG | 0.246430 | 2_1:+74725934 | None:intergenic |
| GACTACAACTATGGTAATAA+AGG | 0.291350 | 2_1:-74727795 | Msa0224780:CDS |
| AAACCTATTGACTACAACTA+TGG | 0.299953 | 2_1:-74727804 | Msa0224780:CDS |
| GTGACCAAAAGTACCGTTTA+AGG | 0.306457 | 2_1:-74729852 | Msa0224780:five_prime_UTR |
| GACAAGATATCTACTTGATT+TGG | 0.322323 | 2_1:-74726254 | Msa0224780:exon |
| GAGTAACGATTAACTTGTTT+TGG | 0.325616 | 2_1:-74726071 | Msa0224780:three_prime_UTR |
| GGCCACCAATTCGTTCATTC+AGG | 0.331363 | 2_1:-74727920 | Msa0224780:CDS |
| GAAAGATTTGAAATGTTTAT+GGG | 0.332265 | 2_1:-74726151 | Msa0224780:three_prime_UTR |
| TGAACCTTAAACGGTACTTT+TGG | 0.336630 | 2_1:+74729848 | None:intergenic |
| GAGTCTTTGTTTGTTGTTGT+TGG | 0.336636 | 2_1:+74729529 | None:intergenic |
| AAAGATGAGAGAGAATAAAT+AGG | 0.343059 | 2_1:-74730068 | Msa0224780:five_prime_UTR |
| ATCACTCCCTCTACCTTTGT+AGG | 0.346610 | 2_1:-74729972 | Msa0224780:five_prime_UTR |
| GAGGAAGAGAAAGTGATTAC+TGG | 0.355323 | 2_1:-74727016 | Msa0224780:CDS |
| CTCTACTCTCTTAGGACAAC+AGG | 0.361485 | 2_1:+74729424 | None:intergenic |
| TTCTGTAACTCTACTCTCTT+AGG | 0.365893 | 2_1:+74729416 | None:intergenic |
| AATAGGGAAGGAAAACTTTA+CGG | 0.390843 | 2_1:-74726119 | Msa0224780:three_prime_UTR |
| ATTTGCACGCTTAGAGTTAG+AGG | 0.390997 | 2_1:+74730043 | None:intergenic |
| TTACCATAGTTGTAGTCAAT+AGG | 0.392789 | 2_1:+74727801 | None:intergenic |
| AGGAAAGAAAGCTTGAACTA+AGG | 0.413057 | 2_1:-74729589 | Msa0224780:CDS |
| GAACTATTGTCGAGTTGGTT+CGG | 0.415531 | 2_1:+74726000 | None:intergenic |
| AATAGACAATGAACCTTAAA+CGG | 0.419132 | 2_1:+74729839 | None:intergenic |
| GCTGTGGATGAGCTCTTTAG+AGG | 0.423705 | 2_1:-74727684 | Msa0224780:CDS |
| GAGAAACCCTACAAAGGTAG+AGG | 0.444678 | 2_1:+74729965 | None:intergenic |
| AATGAAGATACTTACTTCCA+TGG | 0.449209 | 2_1:+74726917 | None:intergenic |
| GACAATTAACTCGTTGAACT+TGG | 0.449300 | 2_1:-74725965 | Msa0224780:three_prime_UTR |
| GTCTGAGATTCTGGTTGTGA+TGG | 0.455939 | 2_1:+74727867 | None:intergenic |
| AACAAACAAAGACTCTCATT+TGG | 0.459493 | 2_1:-74729521 | Msa0224780:CDS |
| TTCTTCCTGAATGAACGAAT+TGG | 0.461192 | 2_1:+74727915 | None:intergenic |
| TCACTCCCTCTACCTTTGTA+GGG | 0.462808 | 2_1:-74729971 | Msa0224780:five_prime_UTR |
| CACCTGGTGTTGAAGAAGAC+TGG | 0.475839 | 2_1:-74729559 | Msa0224780:CDS |
| AACATGGATGGTGTTCCAAT+TGG | 0.487413 | 2_1:-74727756 | Msa0224780:CDS |
| ATGAGGATAATGAAGGAGAC+AGG | 0.490984 | 2_1:-74726958 | Msa0224780:CDS |
| GGCCAACCCACTACTGGTCC+AGG | 0.495601 | 2_1:+74727939 | None:intergenic |
| ACTGGATTATTGGATGGAAG+TGG | 0.500145 | 2_1:-74726998 | Msa0224780:CDS |
| TTTGTAGATGAGGGTAGGGC+TGG | 0.505596 | 2_1:-74726030 | Msa0224780:three_prime_UTR |
| TACACTTATTTGAGGTAGCT+AGG | 0.506349 | 2_1:+74729797 | None:intergenic |
| AGTTAGCATACACTTATTTG+AGG | 0.509704 | 2_1:+74729789 | None:intergenic |
| ATTGGTGGCCAACCCACTAC+TGG | 0.512048 | 2_1:+74727933 | None:intergenic |
| CTCCTGGACCAGTAGTGGGT+TGG | 0.519977 | 2_1:-74727941 | Msa0224780:CDS |
| GTGATTACTGGATTATTGGA+TGG | 0.521970 | 2_1:-74727004 | Msa0224780:CDS |
| TTCTCTTCAAATTCAAACAA+TGG | 0.522441 | 2_1:-74729491 | Msa0224780:CDS |
| GTTCCGAACTATTGTCGAGT+TGG | 0.525953 | 2_1:+74725995 | None:intergenic |
| GAACTAAGGCTTGGTCCACC+TGG | 0.527306 | 2_1:-74729575 | Msa0224780:CDS |
| AACAACAACAATGTTGCTGC+TGG | 0.531158 | 2_1:-74727831 | Msa0224780:CDS |
| AGAGTATACTCTTGTATATG+AGG | 0.532161 | 2_1:-74726975 | Msa0224780:CDS |
| AACTGCTCCTGGACCAGTAG+TGG | 0.534809 | 2_1:-74727946 | Msa0224780:CDS |
| TTTCCAACACCTCTCAGAAA+AGG | 0.535342 | 2_1:-74729367 | Msa0224780:intron |
| GAAATGAAAGTGCTGTTAAG+TGG | 0.537872 | 2_1:-74726227 | Msa0224780:three_prime_UTR |
| TTCCTGAATGAACGAATTGG+TGG | 0.539764 | 2_1:+74727918 | None:intergenic |
| CTTGTATATGAGGATAATGA+AGG | 0.541105 | 2_1:-74726965 | Msa0224780:CDS |
| AGAAAGCTTGAACTAAGGCT+TGG | 0.547085 | 2_1:-74729584 | Msa0224780:CDS |
| GAACCAACTCGACAATAGTT+CGG | 0.550454 | 2_1:-74725998 | Msa0224780:three_prime_UTR |
| CTGAAGAATACATAAAACAA+AGG | 0.552545 | 2_1:-74729682 | Msa0224780:five_prime_UTR |
| AGAGGGAGTGATAATAGCAA+TGG | 0.556501 | 2_1:+74729983 | None:intergenic |
| GAAGGAGACAGGATGCTTGT+TGG | 0.558754 | 2_1:-74726947 | Msa0224780:CDS |
| TGAAGAATACATAAAACAAA+GGG | 0.559013 | 2_1:-74729681 | Msa0224780:five_prime_UTR |
| CAACGAGATTCCTCTGCTTG+TGG | 0.563383 | 2_1:-74727055 | Msa0224780:CDS |
| CTTGTTACCACCACAAGCAG+AGG | 0.563731 | 2_1:+74727045 | None:intergenic |
| TGAAAATCTTTCTTCAGCTG+TGG | 0.566410 | 2_1:-74727700 | Msa0224780:CDS |
| TGTGTACTCTTGATTTACTG+TGG | 0.566567 | 2_1:-74726093 | Msa0224780:three_prime_UTR |
| TGCTTGTTGGTGATGTCCCA+TGG | 0.578016 | 2_1:-74726934 | Msa0224780:CDS |
| ATGAAGATACTTACTTCCAT+GGG | 0.597211 | 2_1:+74726918 | None:intergenic |
| TGTTTGTATCAACAGTGAAG+AGG | 0.599382 | 2_1:-74726445 | Msa0224780:CDS |
| TTTGCACGCTTAGAGTTAGA+GGG | 0.601002 | 2_1:+74730044 | None:intergenic |
| ACTGCTCCTGGACCAGTAGT+GGG | 0.605389 | 2_1:-74727945 | Msa0224780:CDS |
| CGAGATTCCTCTGCTTGTGG+TGG | 0.607101 | 2_1:-74727052 | Msa0224780:CDS |
| AAGAGAGTAGAGTTACAGAA+TGG | 0.608229 | 2_1:-74729413 | Msa0224780:CDS |
| AACCAGTCTTCTTCAACACC+AGG | 0.614487 | 2_1:+74729557 | None:intergenic |
| AGAAACCCTACAAAGGTAGA+GGG | 0.614711 | 2_1:+74729966 | None:intergenic |
| TTTGTTAAGATCAACATGGA+TGG | 0.616572 | 2_1:-74727768 | Msa0224780:CDS |
| TGGTGGTAACAAGAAAGAAG+AGG | 0.622799 | 2_1:-74727035 | Msa0224780:CDS |
| AGAAGAGAGAAACCCTACAA+AGG | 0.630359 | 2_1:+74729959 | None:intergenic |
| AAATGAAAGAGAATCTTCTG+AGG | 0.635545 | 2_1:-74729609 | Msa0224780:CDS |
| ATTCTTTGTTACCTCTCACA+CGG | 0.647769 | 2_1:+74729462 | None:intergenic |
| TTTGTTTGTTAAGATCAACA+TGG | 0.679515 | 2_1:-74727772 | Msa0224780:CDS |
| CAGTCTTCTTCAACACCAGG+TGG | 0.689120 | 2_1:+74729560 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAATTTTTTTTTCAGT+TGG | - | chr2_1:74729732-74729751 | Msa0224780:intron | 10.0% |
| !!! | AAGCTTTAAAAAAAAAAGAT+AGG | + | chr2_1:74726261-74726280 | None:intergenic | 15.0% |
| !! | AAATATAAAAAACTAAACCT+AGG | + | chr2_1:74726316-74726335 | None:intergenic | 15.0% |
| !! | AAAAACTTTAGATATAGAAA+AGG | + | chr2_1:74726685-74726704 | None:intergenic | 15.0% |
| !!! | TTATTTTTATTTTAAGACAG+AGG | - | chr2_1:74726704-74726723 | Msa0224780:intron | 15.0% |
| !!! | TAATTAATAATGGAAAAACA+TGG | + | chr2_1:74726864-74726883 | None:intergenic | 15.0% |
| !! | AAAAATAAAGTATACTCTAT+AGG | + | chr2_1:74727494-74727513 | None:intergenic | 15.0% |
| !! | TAAATTGAACTAATTTCATA+AGG | + | chr2_1:74727567-74727586 | None:intergenic | 15.0% |
| !!! | CAAATATTTTATTGTTTACA+AGG | - | chr2_1:74727642-74727661 | Msa0224780:intron | 15.0% |
| !! | CAAAAACTTAAAATAAAAAG+TGG | - | chr2_1:74727747-74727766 | Msa0224780:CDS | 15.0% |
| !! | AACAAAATAATAACTTTAGA+AGG | - | chr2_1:74727788-74727807 | Msa0224780:CDS | 15.0% |
| !! | TCAAAAAAAAAAACTTTAGA+AGG | - | chr2_1:74727819-74727838 | Msa0224780:CDS | 15.0% |
| !! | AACATATATTAATACCTTTA+AGG | + | chr2_1:74728364-74728383 | None:intergenic | 15.0% |
| !! | CTATGATTGAATTTAAAAAA+GGG | + | chr2_1:74728392-74728411 | None:intergenic | 15.0% |
| !! | ACTATGATTGAATTTAAAAA+AGG | + | chr2_1:74728393-74728412 | None:intergenic | 15.0% |
| !! | TATATTATATATACCTACAT+GGG | + | chr2_1:74728467-74728486 | None:intergenic | 15.0% |
| !! | ATATATTATATATACCTACA+TGG | + | chr2_1:74728468-74728487 | None:intergenic | 15.0% |
| !! | ATGTAGGTATATATAATATA+TGG | - | chr2_1:74728467-74728486 | Msa0224780:intron | 15.0% |
| !! | TTATAAAACTCTTTAACTAT+TGG | + | chr2_1:74728552-74728571 | None:intergenic | 15.0% |
| !! | AATAAAAATTCAAAGCAATA+TGG | + | chr2_1:74728874-74728893 | None:intergenic | 15.0% |
| !!! | TAATCTATGTACTTTAAAAA+TGG | + | chr2_1:74728899-74728918 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAATGTATGTGTT+TGG | - | chr2_1:74729546-74729565 | Msa0224780:CDS | 15.0% |
| !!! | AATGTGTATGATTTTTTTTT+TGG | - | chr2_1:74729842-74729861 | Msa0224780:five_prime_UTR | 15.0% |
| !! | TGAAGAATACATAAAACAAA+GGG | - | chr2_1:74726338-74726357 | Msa0224780:intron | 20.0% |
| !! | AAGGAAAAAATAGATAAAGA+AGG | + | chr2_1:74727090-74727109 | None:intergenic | 20.0% |
| !!! | TTCTTTATCTATTTTTTCCT+TGG | - | chr2_1:74727089-74727108 | Msa0224780:intron | 20.0% |
| !!! | TCTTTATCTATTTTTTCCTT+GGG | - | chr2_1:74727090-74727109 | Msa0224780:intron | 20.0% |
| !!! | TATTAGTTTTCATTTTTCCT+TGG | - | chr2_1:74727170-74727189 | Msa0224780:intron | 20.0% |
| !! | AACACAATTGTATATTTGTA+AGG | + | chr2_1:74727520-74727539 | None:intergenic | 20.0% |
| !! | TACAAATATACAATTGTGTT+TGG | - | chr2_1:74727520-74727539 | Msa0224780:intron | 20.0% |
| !! | AAAAAAGATCTCATTAGAAT+TGG | + | chr2_1:74727669-74727688 | None:intergenic | 20.0% |
| !! | AAGTACAAAAAAGTTCAATT+GGG | - | chr2_1:74728671-74728690 | Msa0224780:intron | 20.0% |
| !! | AAATTCAACATTAATGCTTA+AGG | - | chr2_1:74728796-74728815 | Msa0224780:intron | 20.0% |
| !!! | GCATTAGAATAAAATTTGTT+TGG | + | chr2_1:74728835-74728854 | None:intergenic | 20.0% |
| !! | TAATTGTATTATTGCTAAGA+GGG | + | chr2_1:74729422-74729441 | None:intergenic | 20.0% |
| !! | TTAATTGTATTATTGCTAAG+AGG | + | chr2_1:74729423-74729442 | None:intergenic | 20.0% |
| !! | TATTGTTAGAAAACTATTAC+TGG | - | chr2_1:74729493-74729512 | Msa0224780:CDS | 20.0% |
| !!! | TGAAAGATTTGAAATGTTTA+TGG | - | chr2_1:74729867-74729886 | Msa0224780:five_prime_UTR | 20.0% |
| !!! | GAAAGATTTGAAATGTTTAT+GGG | - | chr2_1:74729868-74729887 | Msa0224780:five_prime_UTR | 20.0% |
| !!! | TTTATGGGTTTTGTATAAAT+AGG | - | chr2_1:74729883-74729902 | Msa0224780:five_prime_UTR | 20.0% |
| !!! | TTATGGGTTTTGTATAAATA+GGG | - | chr2_1:74729884-74729903 | Msa0224780:five_prime_UTR | 20.0% |
| ! | AAAGATGAGAGAGAATAAAT+AGG | - | chr2_1:74725951-74725970 | Msa0224780:three_prime_UTR | 25.0% |
| ! | AATAGACAATGAACCTTAAA+CGG | + | chr2_1:74726183-74726202 | None:intergenic | 25.0% |
| ! | GGAAAATGAAACAAAAACAT+AGG | + | chr2_1:74726295-74726314 | None:intergenic | 25.0% |
| !!! | TGTTTTTGTTTCATTTTCCT+AGG | - | chr2_1:74726296-74726315 | Msa0224780:intron | 25.0% |
| ! | CTGAAGAATACATAAAACAA+AGG | - | chr2_1:74726337-74726356 | Msa0224780:intron | 25.0% |
| ! | TTCTCTTCAAATTCAAACAA+TGG | - | chr2_1:74726528-74726547 | Msa0224780:intron | 25.0% |
| ! | AGGCATGTAGTAATTAATAA+TGG | + | chr2_1:74726874-74726893 | None:intergenic | 25.0% |
| ! | TACATGCCTTATATAAACAT+TGG | - | chr2_1:74726885-74726904 | Msa0224780:intron | 25.0% |
| ! | TTTGTGCCAATGTTTATATA+AGG | + | chr2_1:74726894-74726913 | None:intergenic | 25.0% |
| !! | ATATATTTTGTGTGTAGATG+AGG | + | chr2_1:74726929-74726948 | None:intergenic | 25.0% |
| ! | CATCTACACACAAAATATAT+TGG | - | chr2_1:74726929-74726948 | Msa0224780:intron | 25.0% |
| ! | CAAAAATAGTTACTAGTACA+TGG | + | chr2_1:74726985-74727004 | None:intergenic | 25.0% |
| !!! | CTTTATCTATTTTTTCCTTG+GGG | - | chr2_1:74727091-74727110 | Msa0224780:intron | 25.0% |
| !!! | TACCCATTTTTTAATGATGA+GGG | + | chr2_1:74727197-74727216 | None:intergenic | 25.0% |
| !!! | ATACCCATTTTTTAATGATG+AGG | + | chr2_1:74727198-74727217 | None:intergenic | 25.0% |
| ! | TTGCAATATTGCATATTTCT+GGG | - | chr2_1:74727278-74727297 | Msa0224780:intron | 25.0% |
| !! | ATTTGAAATTCTTAAGTGTC+CGG | + | chr2_1:74727320-74727339 | None:intergenic | 25.0% |
| ! | GTAACAAAAACTCAAGATAT+GGG | + | chr2_1:74727463-74727482 | None:intergenic | 25.0% |
| !!! | TAAGCCCTTATTTTATTTTG+AGG | - | chr2_1:74727610-74727629 | Msa0224780:intron | 25.0% |
| !!! | AAGCCCTTATTTTATTTTGA+GGG | - | chr2_1:74727611-74727630 | Msa0224780:intron | 25.0% |
| ! | GATCCCTCAAAATAAAATAA+GGG | + | chr2_1:74727617-74727636 | None:intergenic | 25.0% |
| ! | TGATCCCTCAAAATAAAATA+AGG | + | chr2_1:74727618-74727637 | None:intergenic | 25.0% |
| ! | TAAAAAGTGGTATATTAGCT+AGG | - | chr2_1:74727760-74727779 | Msa0224780:CDS | 25.0% |
| ! | ATATTTGCCTAACTAACATA+TGG | - | chr2_1:74727861-74727880 | Msa0224780:CDS | 25.0% |
| ! | ATAGTAACCATATGTTAGTT+AGG | + | chr2_1:74727871-74727890 | None:intergenic | 25.0% |
| ! | CATATGGTTACTATTTGATT+TGG | - | chr2_1:74727877-74727896 | Msa0224780:CDS | 25.0% |
| ! | ATCATGCTTAACTTTGTAAA+TGG | - | chr2_1:74728032-74728051 | Msa0224780:intron | 25.0% |
| !! | TTTGTTTGTTAAGATCAACA+TGG | - | chr2_1:74728247-74728266 | Msa0224780:intron | 25.0% |
| ! | GAAGTACAAAAAAGTTCAAT+TGG | - | chr2_1:74728670-74728689 | Msa0224780:intron | 25.0% |
| !!! | TTTCTTTCATTTTGAGAGAT+AGG | - | chr2_1:74728696-74728715 | Msa0224780:intron | 25.0% |
| ! | ATGTACTATAGCATAAGATT+AGG | + | chr2_1:74729137-74729156 | None:intergenic | 25.0% |
| ! | AATTGTATTATTGCTAAGAG+GGG | + | chr2_1:74729421-74729440 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCAGTTGGTACT+AGG | - | chr2_1:74729739-74729758 | Msa0224780:intron | 25.0% |
| AGTTAGCATACACTTATTTG+AGG | + | chr2_1:74726233-74726252 | None:intergenic | 30.0% | |
| AAATGAAAGAGAATCTTCTG+AGG | - | chr2_1:74726410-74726429 | Msa0224780:CDS | 30.0% | |
| AACAAACAAAGACTCTCATT+TGG | - | chr2_1:74726498-74726517 | Msa0224780:intron | 30.0% | |
| !!! | GTTTTTTTCTCCTACTATTG+TGG | - | chr2_1:74726750-74726769 | Msa0224780:intron | 30.0% |
| GACAATTTCAGATATTCACA+TGG | + | chr2_1:74727134-74727153 | None:intergenic | 30.0% | |
| GTCCCTCATCATTAAAAAAT+GGG | - | chr2_1:74727192-74727211 | Msa0224780:intron | 30.0% | |
| CTTGCAATATTGCATATTTC+TGG | - | chr2_1:74727277-74727296 | Msa0224780:intron | 30.0% | |
| GGTAACAAAAACTCAAGATA+TGG | + | chr2_1:74727464-74727483 | None:intergenic | 30.0% | |
| GTATACTCTATAGGAACTAA+AGG | + | chr2_1:74727485-74727504 | None:intergenic | 30.0% | |
| !! | ATTTGATTTGGATGAGTGAT+TGG | - | chr2_1:74727889-74727908 | Msa0224780:CDS | 30.0% |
| ATTTGAAGGGTTATGCTAAT+AGG | - | chr2_1:74727919-74727938 | Msa0224780:CDS | 30.0% | |
| TAAACAGTGAAACTTGTAGT+AGG | + | chr2_1:74728010-74728029 | None:intergenic | 30.0% | |
| ! | AAACCTATTGACTACAACTA+TGG | - | chr2_1:74728215-74728234 | Msa0224780:intron | 30.0% |
| TTACCATAGTTGTAGTCAAT+AGG | + | chr2_1:74728221-74728240 | None:intergenic | 30.0% | |
| GACTACAACTATGGTAATAA+AGG | - | chr2_1:74728224-74728243 | Msa0224780:intron | 30.0% | |
| TTTGTTAAGATCAACATGGA+TGG | - | chr2_1:74728251-74728270 | Msa0224780:intron | 30.0% | |
| ! | AGATCAACTTTTCTACCAAT+TGG | + | chr2_1:74728281-74728300 | None:intergenic | 30.0% |
| ATTCAATCATAGTACTCATG+TGG | - | chr2_1:74728400-74728419 | Msa0224780:intron | 30.0% | |
| TTTACATTTCTTTCCCATGT+AGG | - | chr2_1:74728451-74728470 | Msa0224780:intron | 30.0% | |
| ! | AAACCATGCTTTTACTAGTA+GGG | + | chr2_1:74728727-74728746 | None:intergenic | 30.0% |
| ! | AAAACCATGCTTTTACTAGT+AGG | + | chr2_1:74728728-74728747 | None:intergenic | 30.0% |
| GAAAGTGATTACTGGATTAT+TGG | - | chr2_1:74729011-74729030 | Msa0224780:intron | 30.0% | |
| AGAGTATACTCTTGTATATG+AGG | - | chr2_1:74729044-74729063 | Msa0224780:intron | 30.0% | |
| CTTGTATATGAGGATAATGA+AGG | - | chr2_1:74729054-74729073 | Msa0224780:intron | 30.0% | |
| ATGAAGATACTTACTTCCAT+GGG | + | chr2_1:74729104-74729123 | None:intergenic | 30.0% | |
| AATGAAGATACTTACTTCCA+TGG | + | chr2_1:74729105-74729124 | None:intergenic | 30.0% | |
| ACTAGTAATTATGAAGCACA+AGG | + | chr2_1:74729277-74729296 | None:intergenic | 30.0% | |
| AACACTTGTCATAAATCATG+TGG | + | chr2_1:74729329-74729348 | None:intergenic | 30.0% | |
| ATTAAATCACACTAGTTAGC+AGG | + | chr2_1:74729473-74729492 | None:intergenic | 30.0% | |
| GTTAGAAAACTATTACTGGT+AGG | - | chr2_1:74729497-74729516 | Msa0224780:CDS | 30.0% | |
| GACAAGATATCTACTTGATT+TGG | - | chr2_1:74729765-74729784 | Msa0224780:intron | 30.0% | |
| AATAGGGAAGGAAAACTTTA+CGG | - | chr2_1:74729900-74729919 | Msa0224780:five_prime_UTR | 30.0% | |
| !!! | GAGTAACGATTAACTTGTTT+TGG | - | chr2_1:74729948-74729967 | Msa0224780:five_prime_UTR | 30.0% |
| !! | TTGAAGTCATTTTGTAGATG+AGG | - | chr2_1:74729979-74729998 | Msa0224780:five_prime_UTR | 30.0% |
| !! | TGAAGTCATTTTGTAGATGA+GGG | - | chr2_1:74729980-74729999 | Msa0224780:five_prime_UTR | 30.0% |
| ! | CTTTTTCTTTCTTTCTCCAG+TGG | - | chr2_1:74726142-74726161 | Msa0224780:three_prime_UTR | 35.0% |
| ! | TGAACCTTAAACGGTACTTT+TGG | + | chr2_1:74726174-74726193 | None:intergenic | 35.0% |
| ! | TACACTTATTTGAGGTAGCT+AGG | + | chr2_1:74726225-74726244 | None:intergenic | 35.0% |
| AGGAAAGAAAGCTTGAACTA+AGG | - | chr2_1:74726430-74726449 | Msa0224780:CDS | 35.0% | |
| !! | GAGTCTTTGTTTGTTGTTGT+TGG | + | chr2_1:74726493-74726512 | None:intergenic | 35.0% |
| ATTCTTTGTTACCTCTCACA+CGG | + | chr2_1:74726560-74726579 | None:intergenic | 35.0% | |
| TTCTGTAACTCTACTCTCTT+AGG | + | chr2_1:74726606-74726625 | None:intergenic | 35.0% | |
| AAGAGAGTAGAGTTACAGAA+TGG | - | chr2_1:74726606-74726625 | Msa0224780:intron | 35.0% | |
| AGACATCTCTGAATCAAACA+TGG | + | chr2_1:74727027-74727046 | None:intergenic | 35.0% | |
| !!! | TCTATTTTTTCCTTGGGGTT+TGG | - | chr2_1:74727096-74727115 | Msa0224780:intron | 35.0% |
| ! | TTTTTAATGATGAGGGACCA+AGG | + | chr2_1:74727190-74727209 | None:intergenic | 35.0% |
| GGTCCCTCATCATTAAAAAA+TGG | - | chr2_1:74727191-74727210 | Msa0224780:intron | 35.0% | |
| TTTGGATGAGTGATTGGATT+TGG | - | chr2_1:74727895-74727914 | Msa0224780:CDS | 35.0% | |
| TTGGATGAGTGATTGGATTT+GGG | - | chr2_1:74727896-74727915 | Msa0224780:CDS | 35.0% | |
| ! | TGATTGGATTTGGGATTTGA+AGG | - | chr2_1:74727905-74727924 | Msa0224780:CDS | 35.0% |
| ! | GATTGGATTTGGGATTTGAA+GGG | - | chr2_1:74727906-74727925 | Msa0224780:CDS | 35.0% |
| !!! | AGCAGTTCTGTTTTTTTGGT+GGG | + | chr2_1:74728060-74728079 | None:intergenic | 35.0% |
| TTCTTCCTGAATGAACGAAT+TGG | + | chr2_1:74728107-74728126 | None:intergenic | 35.0% | |
| TGAAAATCTTTCTTCAGCTG+TGG | - | chr2_1:74728319-74728338 | Msa0224780:intron | 35.0% | |
| TAAAAACATTGACCACACGA+CGG | + | chr2_1:74728427-74728446 | None:intergenic | 35.0% | |
| TTCATCAACGTGTTTCGATA+CGG | - | chr2_1:74728514-74728533 | Msa0224780:intron | 35.0% | |
| !! | CTTTCATTTTGAGAGATAGG+TGG | - | chr2_1:74728699-74728718 | Msa0224780:intron | 35.0% |
| GTGATTACTGGATTATTGGA+TGG | - | chr2_1:74729015-74729034 | Msa0224780:intron | 35.0% | |
| TGTTTGTATCAACAGTGAAG+AGG | - | chr2_1:74729574-74729593 | Msa0224780:CDS | 35.0% | |
| !! | GAAATGAAAGTGCTGTTAAG+TGG | - | chr2_1:74729792-74729811 | Msa0224780:intron | 35.0% |
| !! | GGGTTTTGTATAAATAGGGA+AGG | - | chr2_1:74729888-74729907 | Msa0224780:five_prime_UTR | 35.0% |
| TGTGTACTCTTGATTTACTG+TGG | - | chr2_1:74729926-74729945 | Msa0224780:five_prime_UTR | 35.0% | |
| ! | TCATTTTGTAGATGAGGGTA+GGG | - | chr2_1:74729985-74730004 | Msa0224780:five_prime_UTR | 35.0% |
| GACAATTAACTCGTTGAACT+TGG | - | chr2_1:74730054-74730073 | Msa0224780:five_prime_UTR | 35.0% | |
| TTTGCACGCTTAGAGTTAGA+GGG | + | chr2_1:74725978-74725997 | None:intergenic | 40.0% | |
| ATTTGCACGCTTAGAGTTAG+AGG | + | chr2_1:74725979-74725998 | None:intergenic | 40.0% | |
| AGAGGGAGTGATAATAGCAA+TGG | + | chr2_1:74726039-74726058 | None:intergenic | 40.0% | |
| AGAAACCCTACAAAGGTAGA+GGG | + | chr2_1:74726056-74726075 | None:intergenic | 40.0% | |
| AGAAGAGAGAAACCCTACAA+AGG | + | chr2_1:74726063-74726082 | None:intergenic | 40.0% | |
| !! | GTGACCAAAAGTACCGTTTA+AGG | - | chr2_1:74726167-74726186 | Msa0224780:three_prime_UTR | 40.0% |
| AGAAAGCTTGAACTAAGGCT+TGG | - | chr2_1:74726435-74726454 | Msa0224780:CDS | 40.0% | |
| TTTCCAACACCTCTCAGAAA+AGG | - | chr2_1:74726652-74726671 | Msa0224780:intron | 40.0% | |
| ! | GGTATAGTACCTTTTCTGAG+AGG | + | chr2_1:74726664-74726683 | None:intergenic | 40.0% |
| GAAACAGAACAGAACTTGCA+TGG | + | chr2_1:74726777-74726796 | None:intergenic | 40.0% | |
| GAATCAAACATGGCTAGGAA+AGG | + | chr2_1:74727017-74727036 | None:intergenic | 40.0% | |
| TCTCTGAATCAAACATGGCT+AGG | + | chr2_1:74727022-74727041 | None:intergenic | 40.0% | |
| GAAATGTTAACTATCACCCC+TGG | + | chr2_1:74727441-74727460 | None:intergenic | 40.0% | |
| !!! | GCAGTTCTGTTTTTTTGGTG+GGG | + | chr2_1:74728059-74728078 | None:intergenic | 40.0% |
| !!! | GAGCAGTTCTGTTTTTTTGG+TGG | + | chr2_1:74728061-74728080 | None:intergenic | 40.0% |
| !!! | CAGGAGCAGTTCTGTTTTTT+TGG | + | chr2_1:74728064-74728083 | None:intergenic | 40.0% |
| CAAAAAAACAGAACTGCTCC+TGG | - | chr2_1:74728062-74728081 | Msa0224780:intron | 40.0% | |
| TTCCTGAATGAACGAATTGG+TGG | + | chr2_1:74728104-74728123 | None:intergenic | 40.0% | |
| AACAACAACAATGTTGCTGC+TGG | - | chr2_1:74728188-74728207 | Msa0224780:intron | 40.0% | |
| AACATGGATGGTGTTCCAAT+TGG | - | chr2_1:74728263-74728282 | Msa0224780:intron | 40.0% | |
| ! | CTCTTTAGAGGACTCCTTAA+AGG | - | chr2_1:74728347-74728366 | Msa0224780:intron | 40.0% |
| GTTTCGATACGGCTAGTATT+TGG | - | chr2_1:74728525-74728544 | Msa0224780:intron | 40.0% | |
| GTACCCTACTAGTAAAAGCA+TGG | - | chr2_1:74728721-74728740 | Msa0224780:intron | 40.0% | |
| ACTAGCTGTATGCTTCAGAT+TGG | - | chr2_1:74728765-74728784 | Msa0224780:intron | 40.0% | |
| TGGTGGTAACAAGAAAGAAG+AGG | - | chr2_1:74728984-74729003 | Msa0224780:intron | 40.0% | |
| GAGGAAGAGAAAGTGATTAC+TGG | - | chr2_1:74729003-74729022 | Msa0224780:intron | 40.0% | |
| ACTGGATTATTGGATGGAAG+TGG | - | chr2_1:74729021-74729040 | Msa0224780:intron | 40.0% | |
| ATGAGGATAATGAAGGAGAC+AGG | - | chr2_1:74729061-74729080 | Msa0224780:intron | 40.0% | |
| AAATCACACTAGTTAGCAGG+AGG | + | chr2_1:74729470-74729489 | None:intergenic | 40.0% | |
| !! | CTGCTTTTACACGTGAGTAA+TGG | - | chr2_1:74729625-74729644 | Msa0224780:CDS | 40.0% |
| !! | GTCATTTTGTAGATGAGGGT+AGG | - | chr2_1:74729984-74730003 | Msa0224780:five_prime_UTR | 40.0% |
| !! | GAACTATTGTCGAGTTGGTT+CGG | + | chr2_1:74730022-74730041 | None:intergenic | 40.0% |
| GAACCAACTCGACAATAGTT+CGG | - | chr2_1:74730021-74730040 | Msa0224780:five_prime_UTR | 40.0% | |
| ATCACTCCCTCTACCTTTGT+AGG | - | chr2_1:74726047-74726066 | Msa0224780:three_prime_UTR | 45.0% | |
| TCACTCCCTCTACCTTTGTA+GGG | - | chr2_1:74726048-74726067 | Msa0224780:three_prime_UTR | 45.0% | |
| GAGAAACCCTACAAAGGTAG+AGG | + | chr2_1:74726057-74726076 | None:intergenic | 45.0% | |
| AACCAGTCTTCTTCAACACC+AGG | + | chr2_1:74726465-74726484 | None:intergenic | 45.0% | |
| ! | AATGGTTTTCACCGTGTGAG+AGG | - | chr2_1:74726546-74726565 | Msa0224780:intron | 45.0% |
| CTCTACTCTCTTAGGACAAC+AGG | + | chr2_1:74726598-74726617 | None:intergenic | 45.0% | |
| !! | GTACCTTTTCTGAGAGGTGT+TGG | + | chr2_1:74726658-74726677 | None:intergenic | 45.0% |
| CTTGCATGGACCACAATAGT+AGG | + | chr2_1:74726763-74726782 | None:intergenic | 45.0% | |
| GTATGTCAAACCAAACCCCA+AGG | + | chr2_1:74727109-74727128 | None:intergenic | 45.0% | |
| ! | GTCTGAGATTCTGGTTGTGA+TGG | + | chr2_1:74728155-74728174 | None:intergenic | 45.0% |
| ! | TGCTGTTGAGTCTGAGATTC+TGG | + | chr2_1:74728164-74728183 | None:intergenic | 45.0% |
| TCCAATTCCATCACTCGATG+TGG | - | chr2_1:74729209-74729228 | Msa0224780:intron | 45.0% | |
| CAAAATGCCACATCGAGTGA+TGG | + | chr2_1:74729219-74729238 | None:intergenic | 45.0% | |
| ATCTGTAGCACTACATGCCA+TGG | - | chr2_1:74729357-74729376 | Msa0224780:intron | 45.0% | |
| TGTGACAAACAGACATGCCA+TGG | + | chr2_1:74729377-74729396 | None:intergenic | 45.0% | |
| TTATTGCTAAGAGGGGACAG+TGG | + | chr2_1:74729414-74729433 | None:intergenic | 45.0% | |
| GTTCCGAACTATTGTCGAGT+TGG | + | chr2_1:74730027-74730046 | None:intergenic | 45.0% | |
| !!! | TGTTTTTTAATAATTTTTTT+TGG | - | chr2_1:74727234-74727253 | Msa0224780:intron | 5.0% |
| !!! | GTTTTTTAATAATTTTTTTT+GGG | - | chr2_1:74727235-74727254 | Msa0224780:intron | 5.0% |
| !! | TGTTAATATTATTTAATTAA+AGG | - | chr2_1:74729300-74729319 | Msa0224780:intron | 5.0% |
| ! | GTACTTTTGGTCACTGCCAC+TGG | + | chr2_1:74726161-74726180 | None:intergenic | 50.0% |
| CAGTCTTCTTCAACACCAGG+TGG | + | chr2_1:74726462-74726481 | None:intergenic | 50.0% | |
| ! | CACCTGGTGTTGAAGAAGAC+TGG | - | chr2_1:74726460-74726479 | Msa0224780:intron | 50.0% |
| GGGTCTTGCTCACAAGTATC+CGG | - | chr2_1:74727298-74727317 | Msa0224780:intron | 50.0% | |
| ACATCCTCAACAAGTGCTCC+AGG | - | chr2_1:74727420-74727439 | Msa0224780:intron | 50.0% | |
| CATCCTCAACAAGTGCTCCA+GGG | - | chr2_1:74727421-74727440 | Msa0224780:intron | 50.0% | |
| ATCCTCAACAAGTGCTCCAG+GGG | - | chr2_1:74727422-74727441 | Msa0224780:intron | 50.0% | |
| GGCCACCAATTCGTTCATTC+AGG | - | chr2_1:74728099-74728118 | Msa0224780:intron | 50.0% | |
| GCTGTGGATGAGCTCTTTAG+AGG | - | chr2_1:74728335-74728354 | Msa0224780:intron | 50.0% | |
| CAACGAGATTCCTCTGCTTG+TGG | - | chr2_1:74728964-74728983 | Msa0224780:intron | 50.0% | |
| CTTGTTACCACCACAAGCAG+AGG | + | chr2_1:74728977-74728996 | None:intergenic | 50.0% | |
| GAAGGAGACAGGATGCTTGT+TGG | - | chr2_1:74729072-74729091 | Msa0224780:intron | 50.0% | |
| !! | TGCTTGTTGGTGATGTCCCA+TGG | - | chr2_1:74729085-74729104 | Msa0224780:intron | 50.0% |
| ! | GCCACATCGAGTGATGGAAT+TGG | + | chr2_1:74729213-74729232 | None:intergenic | 50.0% |
| TTTGTAGATGAGGGTAGGGC+TGG | - | chr2_1:74729989-74730008 | Msa0224780:five_prime_UTR | 50.0% | |
| ! | GAACTAAGGCTTGGTCCACC+TGG | - | chr2_1:74726444-74726463 | Msa0224780:CDS | 55.0% |
| AACTGCTCCTGGACCAGTAG+TGG | - | chr2_1:74728073-74728092 | Msa0224780:intron | 55.0% | |
| ACTGCTCCTGGACCAGTAGT+GGG | - | chr2_1:74728074-74728093 | Msa0224780:intron | 55.0% | |
| ! | ATTGGTGGCCAACCCACTAC+TGG | + | chr2_1:74728089-74728108 | None:intergenic | 55.0% |
| TACTCATGTGGACCGTCGTG+TGG | - | chr2_1:74728412-74728431 | Msa0224780:intron | 55.0% | |
| CGAGATTCCTCTGCTTGTGG+TGG | - | chr2_1:74728967-74728986 | Msa0224780:intron | 55.0% | |
| ! | CACCCCTGGAGCACTTGTTG+AGG | + | chr2_1:74727427-74727446 | None:intergenic | 60.0% |
| !! | CTCCTGGACCAGTAGTGGGT+TGG | - | chr2_1:74728078-74728097 | Msa0224780:intron | 60.0% |
| GGCCAACCCACTACTGGTCC+AGG | + | chr2_1:74728083-74728102 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 74725948 | 74730093 | 74725948 | ID=Msa0224780;Name=Msa0224780 |
| chr2_1 | mRNA | 74725948 | 74730093 | 74725948 | ID=Msa0224780-mRNA-1;Parent=Msa0224780;Name=Msa0224780-mRNA-1;_AED=0.23;_eAED=0.23;_QI=369|1|1|1|0.8|0.66|6|311|273 |
| chr2_1 | exon | 74725948 | 74726290 | 74725948 | ID=Msa0224780-mRNA-1:exon:22234;Parent=Msa0224780-mRNA-1 |
| chr2_1 | exon | 74726405 | 74726469 | 74726405 | ID=Msa0224780-mRNA-1:exon:22233;Parent=Msa0224780-mRNA-1 |
| chr2_1 | exon | 74726932 | 74727079 | 74726932 | ID=Msa0224780-mRNA-1:exon:22232;Parent=Msa0224780-mRNA-1 |
| chr2_1 | exon | 74727673 | 74727968 | 74727673 | ID=Msa0224780-mRNA-1:exon:22231;Parent=Msa0224780-mRNA-1 |
| chr2_1 | exon | 74729368 | 74729723 | 74729368 | ID=Msa0224780-mRNA-1:exon:22230;Parent=Msa0224780-mRNA-1 |
| chr2_1 | exon | 74729800 | 74730093 | 74729800 | ID=Msa0224780-mRNA-1:exon:22229;Parent=Msa0224780-mRNA-1 |
| chr2_1 | five_prime_UTR | 74729800 | 74730093 | 74729800 | ID=Msa0224780-mRNA-1:five_prime_utr;Parent=Msa0224780-mRNA-1 |
| chr2_1 | five_prime_UTR | 74729649 | 74729723 | 74729649 | ID=Msa0224780-mRNA-1:five_prime_utr;Parent=Msa0224780-mRNA-1 |
| chr2_1 | CDS | 74729368 | 74729648 | 74729368 | ID=Msa0224780-mRNA-1:cds;Parent=Msa0224780-mRNA-1 |
| chr2_1 | CDS | 74727673 | 74727968 | 74727673 | ID=Msa0224780-mRNA-1:cds;Parent=Msa0224780-mRNA-1 |
| chr2_1 | CDS | 74726932 | 74727079 | 74726932 | ID=Msa0224780-mRNA-1:cds;Parent=Msa0224780-mRNA-1 |
| chr2_1 | CDS | 74726405 | 74726469 | 74726405 | ID=Msa0224780-mRNA-1:cds;Parent=Msa0224780-mRNA-1 |
| chr2_1 | CDS | 74726259 | 74726290 | 74726259 | ID=Msa0224780-mRNA-1:cds;Parent=Msa0224780-mRNA-1 |
| chr2_1 | three_prime_UTR | 74725948 | 74726258 | 74725948 | ID=Msa0224780-mRNA-1:three_prime_utr;Parent=Msa0224780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
