AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0471670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0471670 MtrunA17_Chr3g0127201 96.233 292 8 3 17 307 1 290 0.0 568
Msa0471670 MtrunA17_Chr8g0346551 48.822 297 118 14 17 307 1 269 2.96e-71 221
Msa0471670 MtrunA17_Chr1g0188851 43.322 307 118 15 1 298 1 260 9.22e-56 182
Msa0471670 MtrunA17_Chr2g0326001 86.364 66 9 0 32 97 29 94 4.95e-37 134
Msa0471670 MtrunA17_Chr3g0117601 33.133 332 163 12 5 307 17 318 1.12e-36 134
Msa0471670 MtrunA17_Chr4g0010151 50.000 140 56 3 28 163 63 192 9.85e-34 126
Msa0471670 MtrunA17_Chr4g0030051 56.897 116 49 1 32 147 30 144 4.05e-33 123
Msa0471670 MtrunA17_Chr3g0126201 61.798 89 30 1 13 97 17 105 5.64e-32 121
Msa0471670 MtrunA17_Chr4g0031411 50.769 130 54 3 28 149 56 183 1.52e-31 120
Msa0471670 MtrunA17_Chr2g0328021 68.354 79 22 1 32 107 51 129 5.40e-31 117
Msa0471670 MtrunA17_Chr8g0367161 67.568 74 24 0 32 105 21 94 6.31e-31 118
Msa0471670 MtrunA17_Chr7g0223311 53.774 106 44 1 11 111 40 145 7.16e-30 116
Msa0471670 MtrunA17_Chr1g0177251 87.037 54 7 0 44 97 13 66 3.34e-29 112
Msa0471670 MtrunA17_Chr8g0374251 76.271 59 14 0 38 96 63 121 3.99e-29 114
Msa0471670 MtrunA17_Chr4g0047001 50.000 122 44 3 45 164 57 163 6.56e-29 114
Msa0471670 MtrunA17_Chr7g0237921 64.865 74 22 1 28 97 57 130 1.04e-28 112
Msa0471670 MtrunA17_Chr8g0374111 58.974 78 31 1 33 109 18 95 4.61e-28 108
Msa0471670 MtrunA17_Chr2g0282441 70.769 65 14 1 30 94 17 76 5.35e-28 110
Msa0471670 MtrunA17_Chr3g0092111 53.763 93 40 1 32 124 125 214 8.40e-28 112
Msa0471670 MtrunA17_Chr8g0341671 71.212 66 17 2 37 101 15 79 1.74e-27 106
Msa0471670 MtrunA17_Chr5g0411951 77.778 54 12 0 40 93 40 93 5.05e-27 108
Msa0471670 MtrunA17_Chr2g0282511 58.427 89 27 1 3 91 15 93 6.90e-27 107
Msa0471670 MtrunA17_Chr2g0308011 86.000 50 7 0 42 91 36 85 8.16e-27 104
Msa0471670 MtrunA17_Chr4g0047761 65.789 76 21 2 26 97 51 125 8.87e-27 107
Msa0471670 MtrunA17_Chr2g0282051 70.149 67 17 2 33 97 34 99 1.38e-26 105
Msa0471670 MtrunA17_Chr4g0042481 58.904 73 30 0 29 101 108 180 2.60e-26 107
Msa0471670 MtrunA17_Chr4g0061761 77.358 53 12 0 41 93 38 90 4.68e-26 105
Msa0471670 MtrunA17_Chr6g0453321 52.688 93 37 1 8 100 108 193 4.82e-26 107
Msa0471670 MtrunA17_Chr7g0217581 64.179 67 24 0 34 100 223 289 6.43e-26 107
Msa0471670 MtrunA17_Chr8g0355261 59.701 67 27 0 32 98 107 173 1.79e-25 105
Msa0471670 MtrunA17_Chr7g0254161 56.098 82 32 1 23 100 77 158 2.17e-25 105
Msa0471670 MtrunA17_Chr5g0417571 59.155 71 29 0 30 100 125 195 2.59e-25 103
Msa0471670 MtrunA17_Chr6g0460721 55.405 74 33 0 27 100 73 146 1.66e-24 101
Msa0471670 MtrunA17_Chr2g0283811 64.912 57 20 0 40 96 44 100 5.24e-24 95.9
Msa0471670 MtrunA17_Chr6g0460731 47.872 94 47 1 27 118 80 173 6.95e-24 100
Msa0471670 MtrunA17_Chr5g0417601 58.209 67 28 0 30 96 127 193 1.17e-22 96.7
Msa0471670 MtrunA17_Chr5g0417551 46.875 96 51 0 10 105 94 189 9.41e-22 94.0
Msa0471670 MtrunA17_Chr5g0417561 63.492 63 23 0 43 105 119 181 1.43e-21 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0471670 AT3G61850.4 38.268 358 136 16 1 307 1 324 6.25e-58 189
Msa0471670 AT3G61850.5 41.751 297 121 14 29 307 50 312 1.87e-56 185
Msa0471670 AT3G61850.1 38.682 349 119 16 1 307 1 296 5.92e-55 181
Msa0471670 AT3G61850.2 42.361 288 104 14 29 307 50 284 1.30e-53 177
Msa0471670 AT3G61850.3 42.361 288 104 14 29 307 50 284 1.30e-53 177
Msa0471670 AT4G24060.1 37.536 349 168 11 1 307 1 341 7.95e-49 166
Msa0471670 AT2G46590.1 39.941 338 132 17 17 307 44 357 2.33e-44 155
Msa0471670 AT2G46590.2 40.237 338 131 18 17 307 56 369 3.14e-44 155
Msa0471670 AT1G64620.1 37.571 354 153 15 1 302 1 338 5.62e-43 151
Msa0471670 AT5G60200.1 57.391 115 40 2 9 114 12 126 1.89e-37 134
Msa0471670 AT3G55370.1 71.951 82 18 2 29 106 59 139 8.33e-34 126
Msa0471670 AT3G55370.3 71.951 82 18 2 29 106 104 184 1.09e-33 127
Msa0471670 AT3G55370.2 71.951 82 18 2 29 106 59 139 1.11e-33 126
Msa0471670 AT2G28510.1 51.538 130 42 3 41 150 46 174 1.98e-33 124
Msa0471670 AT5G60850.1 70.270 74 22 0 41 114 49 122 4.72e-32 121
Msa0471670 AT3G45610.1 56.863 102 41 2 1 102 1 99 6.22e-32 119
Msa0471670 AT4G00940.1 60.185 108 35 2 30 131 57 162 1.04e-31 120
Msa0471670 AT4G00940.3 60.185 108 35 2 30 131 57 162 1.04e-31 120
Msa0471670 AT4G00940.2 60.185 108 35 2 30 131 57 162 1.04e-31 120
Msa0471670 AT1G51700.1 71.831 71 18 2 37 106 28 97 3.37e-30 113
Msa0471670 AT5G65590.1 60.227 88 30 1 16 103 19 101 4.13e-30 116
Msa0471670 AT2G37590.1 67.123 73 21 1 29 98 72 144 1.11e-29 115
Msa0471670 AT5G62940.1 77.049 61 14 0 33 93 63 123 1.33e-29 116
Msa0471670 AT3G52440.1 82.759 58 10 0 45 102 27 84 2.11e-29 112
Msa0471670 AT3G52440.2 82.759 58 10 0 45 102 46 103 2.79e-29 113
Msa0471670 AT5G02460.1 66.216 74 21 1 28 97 76 149 4.04e-29 115
Msa0471670 AT1G21340.1 81.034 58 11 0 45 102 40 97 1.47e-28 110
Msa0471670 AT3G21270.1 84.906 53 8 0 43 95 29 81 2.68e-28 108
Msa0471670 AT1G28310.1 81.818 55 10 0 43 97 27 81 5.25e-28 110
Msa0471670 AT1G28310.2 81.818 55 10 0 43 97 51 105 8.04e-28 110
Msa0471670 AT1G07640.2 65.278 72 22 1 29 97 60 131 1.20e-27 110
Msa0471670 AT1G07640.1 65.278 72 22 1 29 97 4 75 1.28e-27 108
Msa0471670 AT1G07640.3 65.278 72 22 1 29 97 68 139 1.62e-27 109
Msa0471670 AT5G66940.1 67.606 71 21 2 38 107 28 97 2.42e-27 106
Msa0471670 AT4G38000.1 60.526 76 29 1 22 96 20 95 2.68e-27 107
Msa0471670 AT2G28810.2 67.188 64 20 1 31 94 66 128 7.97e-27 107
Msa0471670 AT2G28810.1 67.188 64 20 1 31 94 83 145 1.18e-26 107
Msa0471670 AT3G50410.1 72.308 65 15 2 37 98 22 86 1.39e-26 105
Msa0471670 AT4G21050.1 71.875 64 17 1 45 108 26 88 3.04e-26 103
Msa0471670 AT1G47655.1 58.974 78 30 1 17 92 1 78 6.91e-26 102
Msa0471670 AT1G69570.1 67.742 62 20 0 35 96 124 185 3.39e-25 104
Msa0471670 AT5G39660.3 66.667 63 21 0 38 100 133 195 3.96e-25 105
Msa0471670 AT5G39660.1 66.667 63 21 0 38 100 133 195 3.96e-25 105
Msa0471670 AT5G39660.2 66.667 63 21 0 38 100 133 195 3.96e-25 105
Msa0471670 AT4G21040.1 67.188 64 19 1 45 108 27 88 5.83e-25 100
Msa0471670 AT3G47500.1 68.333 60 19 0 41 100 108 167 6.27e-25 104
Msa0471670 AT2G34140.1 62.903 62 23 0 35 96 50 111 1.00e-24 98.2
Msa0471670 AT1G26790.1 70.175 57 17 0 40 96 108 164 1.08e-24 102
Msa0471670 AT1G29160.1 55.844 77 32 1 20 96 41 115 1.13e-24 98.2
Msa0471670 AT5G62430.1 62.903 62 23 0 41 102 52 113 2.71e-24 100
Msa0471670 AT4G21080.1 49.425 87 32 2 45 121 27 111 1.77e-23 97.1
Msa0471670 AT4G21030.1 49.333 75 32 1 45 119 23 91 1.00e-14 72.0

Find 76 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATAGGTTATTATTATTTA+TGG 0.111949 3_3:-74039428 Msa0471670:three_prime_UTR
TCTTGTCCTTGATGGATCTT+AGG 0.169048 3_3:+74040139 None:intergenic
TTTAAGCTTGGGGCTAATTT+TGG 0.206492 3_3:-74039899 Msa0471670:CDS
TTCTTCTCATCTTTATCTTT+TGG 0.210346 3_3:-74039517 Msa0471670:three_prime_UTR
TGTTCAAACTCACCACTATT+TGG 0.210892 3_3:+74039725 None:intergenic
ATCAGAACCACTAACAAAAT+AGG 0.243615 3_3:-74039453 Msa0471670:three_prime_UTR
TAAAATAAAATAAAATTAAA+AGG 0.254787 3_3:+74039559 None:intergenic
GGGAGTGGAAGTTTGAAATT+TGG 0.300326 3_3:-74039486 Msa0471670:three_prime_UTR
AAGGTGATTCTACTGGTTAT+TGG 0.303787 3_3:-74039685 Msa0471670:CDS
GAAGGGTTTGAGAATGGTTA+TGG 0.323309 3_3:-74039872 Msa0471670:CDS
GGTTAAGATCTTGTCCTTGA+TGG 0.347085 3_3:+74040131 None:intergenic
GCAAAACTTGTAGAAGGTAT+TGG 0.349440 3_3:-74040348 Msa0471670:CDS
TATTGGATTGGTTAAACAAA+TGG 0.368626 3_3:-74040527 Msa0471670:CDS
ATTAATAATCAAGAGGGTTC+TGG 0.381524 3_3:-74039836 Msa0471670:CDS
CTTGTCCTTGATGGATCTTA+GGG 0.390118 3_3:+74040140 None:intergenic
GAGGGTTCTGGTGGTGGTGG+TGG 0.395369 3_3:-74039824 Msa0471670:CDS
TGGAGGATCATGGTAGATAA+TGG 0.412082 3_3:-74039648 Msa0471670:exon
CAAGAGGGTTCTGGTGGTGG+TGG 0.424985 3_3:-74039827 Msa0471670:CDS
TGAAAACTGCTTCTTCATCA+AGG 0.432756 3_3:-74040000 Msa0471670:CDS
AAGCTCAATGAATTTAGATA+TGG 0.438747 3_3:+74040069 None:intergenic
TCAGAACCACTAACAAAATA+GGG 0.443039 3_3:-74039452 Msa0471670:three_prime_UTR
AACTGATGATCATCTACAAC+AGG 0.454576 3_3:+74039773 None:intergenic
TTGTCTTGATCAGTTGTGTA+AGG 0.463233 3_3:+74040046 None:intergenic
GGTTTAGAAGGGTTTGAGAA+TGG 0.472180 3_3:-74039878 Msa0471670:CDS
CTCTCTAACATAGAAGGTGT+TGG 0.476502 3_3:+74040481 None:intergenic
AATTTAGGGGAATATTGGAT+TGG 0.478716 3_3:-74040539 Msa0471670:intron
GATTCTACTGGTTATTGGAA+TGG 0.482077 3_3:-74039680 Msa0471670:CDS
CTAGACTCAGACAAAGTCAT+AGG 0.485051 3_3:+74039959 None:intergenic
GAAAACTGCTTCTTCATCAA+GGG 0.488666 3_3:-74039999 Msa0471670:CDS
CAGCAACAAATTCCAAATAG+TGG 0.488831 3_3:-74039737 Msa0471670:CDS
TAATTATCCTCAGTTGTTTG+TGG 0.490761 3_3:+74040097 None:intergenic
AATCAAGAGGGTTCTGGTGG+TGG 0.495161 3_3:-74039830 Msa0471670:CDS
TTGTTTGTGGTGGATAAGCT+AGG 0.500159 3_3:+74040110 None:intergenic
TTTCTTGAACCACCACCTAC+AGG 0.506879 3_3:+74040298 None:intergenic
AGGTTATTATTATTTATGGA+TGG 0.508477 3_3:-74039424 Msa0471670:three_prime_UTR
AGAAATGTTCCTGTAGGTGG+TGG 0.516507 3_3:-74040307 Msa0471670:CDS
AATGGTTATGGTGGCTTGCA+AGG 0.516585 3_3:-74039860 Msa0471670:CDS
TCTTTAAGAAATGTTCCTGT+AGG 0.524165 3_3:-74040313 Msa0471670:CDS
GTGAAGAAAGTGATAAACAA+GGG 0.528045 3_3:-74039608 Msa0471670:three_prime_UTR
GAATGTTCGGTGGAGGATCA+TGG 0.528349 3_3:-74039658 Msa0471670:CDS
TTATCCTCAGTTGTTTGTGG+TGG 0.529976 3_3:+74040100 None:intergenic
TTAAGAAATGTTCCTGTAGG+TGG 0.533560 3_3:-74040310 Msa0471670:CDS
AGACAAAACTACAAGTGCTA+TGG 0.533697 3_3:-74040029 Msa0471670:CDS
AGAACTCAAGGTGATTCTAC+TGG 0.537114 3_3:-74039692 Msa0471670:CDS
ACTAACAAAATAGGGTACAT+AGG 0.541218 3_3:-74039444 Msa0471670:three_prime_UTR
CATCAGCAAAATAGAACTCA+AGG 0.544205 3_3:-74039704 Msa0471670:CDS
ATCTATGGACACAGCTCAGT+GGG 0.545119 3_3:-74040977 Msa0471670:exon
GGTTATTGGAATGGAATGTT+CGG 0.551153 3_3:-74039671 Msa0471670:CDS
GGATTGGTTAAACAAATGGA+TGG 0.552908 3_3:-74040523 Msa0471670:CDS
TGGAATGGAATGTTCGGTGG+AGG 0.558324 3_3:-74039665 Msa0471670:CDS
ATCAAGCTTTAAACTGTCCA+AGG 0.561852 3_3:-74040438 Msa0471670:CDS
GGGTTTGAGAATGGTTATGG+TGG 0.564934 3_3:-74039869 Msa0471670:CDS
AAAACTGCTTCTTCATCAAG+GGG 0.565168 3_3:-74039998 Msa0471670:CDS
AGTGCAATGTATAATTCAAG+TGG 0.566445 3_3:-74039938 Msa0471670:CDS
CAAAACCCTAAGATCCATCA+AGG 0.571674 3_3:-74040145 Msa0471670:CDS
TATTGGAATGGAATGTTCGG+TGG 0.576421 3_3:-74039668 Msa0471670:CDS
CAAGGGATTAATAATCAAGA+GGG 0.577580 3_3:-74039842 Msa0471670:CDS
GCAAGGGATTAATAATCAAG+AGG 0.579146 3_3:-74039843 Msa0471670:CDS
ATGGTTATGGTGGCTTGCAA+GGG 0.581200 3_3:-74039859 Msa0471670:CDS
TGTAGAAGGTATTGGACTGA+AGG 0.583395 3_3:-74040340 Msa0471670:CDS
AAAAGTACCTTGGTTGTGAG+AGG 0.583488 3_3:+74040371 None:intergenic
GGTTGTGATTGTGAGATTGA+AGG 0.587222 3_3:+74040247 None:intergenic
AGAAGGTATTGGACTGAAGG+TGG 0.592159 3_3:-74040337 Msa0471670:CDS
GAAAGTGATAAACAAGGGGT+TGG 0.599924 3_3:-74039603 Msa0471670:three_prime_UTR
GGACACAGCTCAGTGGGCAC+AGG 0.600044 3_3:-74040971 Msa0471670:intron
GAATTGGAATATAGTAGTAG+TGG 0.605552 3_3:+74041124 None:intergenic
AGTGAAGAAAGTGATAAACA+AGG 0.620571 3_3:-74039609 Msa0471670:three_prime_UTR
GATTGAAGGTGATGATGATG+AGG 0.631503 3_3:+74040261 None:intergenic
AATAATCAAGAGGGTTCTGG+TGG 0.645196 3_3:-74039833 Msa0471670:CDS
TGAAGAAAGTGATAAACAAG+GGG 0.647930 3_3:-74039607 Msa0471670:three_prime_UTR
ATAACTACAGAAGATTAATG+TGG 0.660579 3_3:-74039329 Msa0471670:three_prime_UTR
ACTATAGCCTCTCACAACCA+AGG 0.671979 3_3:-74040378 Msa0471670:CDS
GTGTTAGTTGAATTGCACCT+TGG 0.675503 3_3:+74040421 None:intergenic
AATCTATGGACACAGCTCAG+TGG 0.676107 3_3:-74040978 Msa0471670:exon
TTATCCACCACAAACAACTG+AGG 0.701982 3_3:-74040104 Msa0471670:CDS
CTATGTTAGAGAGAAAAGCA+AGG 0.712069 3_3:-74040471 Msa0471670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAAATAAAATTAAA+AGG + chr3_3:74040892-74040911 None:intergenic 0.0%
!! TAAAATAAAATAAAATTAAA+AGG + chr3_3:74040892-74040911 None:intergenic 0.0%
!! AAGTATATAAGAAATAATAA+AGG + chr3_3:74039868-74039887 None:intergenic 10.0%
!! ATTATTATTGAAAAATTTAG+GGG - chr3_3:74039896-74039915 Msa0471670:CDS 10.0%
!!! TTCTTTAATCTATTTTAATT+TGG - chr3_3:74041059-74041078 Msa0471670:five_prime_UTR 10.0%
!! AAGTATATAAGAAATAATAA+AGG + chr3_3:74039868-74039887 None:intergenic 10.0%
!! ATTATTATTGAAAAATTTAG+GGG - chr3_3:74039896-74039915 Msa0471670:CDS 10.0%
!!! TTCTTTAATCTATTTTAATT+TGG - chr3_3:74041059-74041078 Msa0471670:five_prime_UTR 10.0%
!! TGATACATAAAACTTTATTA+TGG + chr3_3:74039587-74039606 None:intergenic 15.0%
!! GAAGAAAAAAATAAATGAAA+AGG + chr3_3:74039727-74039746 None:intergenic 15.0%
!!! ATATTTTTTGTTATTGATGA+TGG + chr3_3:74040228-74040247 None:intergenic 15.0%
!! ACATAGGTTATTATTATTTA+TGG - chr3_3:74041020-74041039 Msa0471670:five_prime_UTR 15.0%
!! TGATACATAAAACTTTATTA+TGG + chr3_3:74039587-74039606 None:intergenic 15.0%
!! GAAGAAAAAAATAAATGAAA+AGG + chr3_3:74039727-74039746 None:intergenic 15.0%
!!! ATATTTTTTGTTATTGATGA+TGG + chr3_3:74040228-74040247 None:intergenic 15.0%
!! ACATAGGTTATTATTATTTA+TGG - chr3_3:74041020-74041039 Msa0471670:five_prime_UTR 15.0%
!! TAAGAAGAAAAATGGAAAAA+AGG + chr3_3:74039450-74039469 None:intergenic 20.0%
!! CATAGATTTAAGAAGAAAAA+TGG + chr3_3:74039458-74039477 None:intergenic 20.0%
!!! CATTTTTCTTCTTAAATCTA+TGG - chr3_3:74039456-74039475 Msa0471670:three_prime_UTR 20.0%
!!! TTTTCTTCATGATTATAAGA+AGG + chr3_3:74039532-74039551 None:intergenic 20.0%
!!! AAAACTGAAATTTTTAGTTG+AGG + chr3_3:74039678-74039697 None:intergenic 20.0%
!!! AAATTCATCAACTTTTTCTT+GGG + chr3_3:74039783-74039802 None:intergenic 20.0%
!! AGGTTATTATTATTTATGGA+TGG - chr3_3:74041024-74041043 Msa0471670:five_prime_UTR 20.0%
!! TAAGAAGAAAAATGGAAAAA+AGG + chr3_3:74039450-74039469 None:intergenic 20.0%
!! CATAGATTTAAGAAGAAAAA+TGG + chr3_3:74039458-74039477 None:intergenic 20.0%
!!! CATTTTTCTTCTTAAATCTA+TGG - chr3_3:74039456-74039475 Msa0471670:three_prime_UTR 20.0%
!!! TTTTCTTCATGATTATAAGA+AGG + chr3_3:74039532-74039551 None:intergenic 20.0%
!!! AAAACTGAAATTTTTAGTTG+AGG + chr3_3:74039678-74039697 None:intergenic 20.0%
!!! AAATTCATCAACTTTTTCTT+GGG + chr3_3:74039783-74039802 None:intergenic 20.0%
!! AGGTTATTATTATTTATGGA+TGG - chr3_3:74041024-74041043 Msa0471670:five_prime_UTR 20.0%
! TCTAGAAACTAGAAAAAAGT+GGG - chr3_3:74039387-74039406 Msa0471670:three_prime_UTR 25.0%
! GAAAAATGGAAAAAAGGAAA+AGG + chr3_3:74039444-74039463 None:intergenic 25.0%
!!! GTTGATTATTGTTAGTTCTA+AGG - chr3_3:74039615-74039634 Msa0471670:three_prime_UTR 25.0%
!!! CAAATTCATCAACTTTTTCT+TGG + chr3_3:74039784-74039803 None:intergenic 25.0%
! AATAAAGGAAACAAACAAGA+AGG + chr3_3:74039853-74039872 None:intergenic 25.0%
! TGAAAAATTTAGGGGAATAT+TGG - chr3_3:74039904-74039923 Msa0471670:CDS 25.0%
!!! TATTGGATTGGTTAAACAAA+TGG - chr3_3:74039921-74039940 Msa0471670:CDS 25.0%
!!! TTTAAAGCTTGATCTTTTTG+TGG + chr3_3:74040003-74040022 None:intergenic 25.0%
!!! TTTTTTGTTATTGATGATGG+AGG + chr3_3:74040225-74040244 None:intergenic 25.0%
! AAGCTCAATGAATTTAGATA+TGG + chr3_3:74040382-74040401 None:intergenic 25.0%
!! TTCTTCTCATCTTTATCTTT+TGG - chr3_3:74040931-74040950 Msa0471670:intron 25.0%
!!! ATCTTTATCTTTTGGTAATG+TGG - chr3_3:74040939-74040958 Msa0471670:intron 25.0%
!!! TCTTTATCTTTTGGTAATGT+GGG - chr3_3:74040940-74040959 Msa0471670:intron 25.0%
! ATAACTACAGAAGATTAATG+TGG - chr3_3:74041119-74041138 Msa0471670:five_prime_UTR 25.0%
! TCTAGAAACTAGAAAAAAGT+GGG - chr3_3:74039387-74039406 Msa0471670:three_prime_UTR 25.0%
! GAAAAATGGAAAAAAGGAAA+AGG + chr3_3:74039444-74039463 None:intergenic 25.0%
!!! GTTGATTATTGTTAGTTCTA+AGG - chr3_3:74039615-74039634 Msa0471670:three_prime_UTR 25.0%
!!! CAAATTCATCAACTTTTTCT+TGG + chr3_3:74039784-74039803 None:intergenic 25.0%
! AATAAAGGAAACAAACAAGA+AGG + chr3_3:74039853-74039872 None:intergenic 25.0%
! TGAAAAATTTAGGGGAATAT+TGG - chr3_3:74039904-74039923 Msa0471670:CDS 25.0%
!!! TATTGGATTGGTTAAACAAA+TGG - chr3_3:74039921-74039940 Msa0471670:CDS 25.0%
!!! TTTAAAGCTTGATCTTTTTG+TGG + chr3_3:74040003-74040022 None:intergenic 25.0%
!!! TTTTTTGTTATTGATGATGG+AGG + chr3_3:74040225-74040244 None:intergenic 25.0%
! AAGCTCAATGAATTTAGATA+TGG + chr3_3:74040382-74040401 None:intergenic 25.0%
!! TTCTTCTCATCTTTATCTTT+TGG - chr3_3:74040931-74040950 Msa0471670:intron 25.0%
!!! ATCTTTATCTTTTGGTAATG+TGG - chr3_3:74040939-74040958 Msa0471670:intron 25.0%
!!! TCTTTATCTTTTGGTAATGT+GGG - chr3_3:74040940-74040959 Msa0471670:intron 25.0%
! ATAACTACAGAAGATTAATG+TGG - chr3_3:74041119-74041138 Msa0471670:five_prime_UTR 25.0%
GAATTGGAATATAGTAGTAG+TGG + chr3_3:74039327-74039346 None:intergenic 30.0%
!!! CACTTTTTTCTAGTTTCTAG+AGG + chr3_3:74039388-74039407 None:intergenic 30.0%
! CTCTAGAAACTAGAAAAAAG+TGG - chr3_3:74039386-74039405 Msa0471670:three_prime_UTR 30.0%
GAAGGAAAGAAAACAGAAAA+AGG + chr3_3:74039514-74039533 None:intergenic 30.0%
!!! GAAATTTTTAGTTGAGGATC+AGG + chr3_3:74039672-74039691 None:intergenic 30.0%
! CTTTTTCTTGGGAAAAAGAA+AGG + chr3_3:74039772-74039791 None:intergenic 30.0%
AATTTAGGGGAATATTGGAT+TGG - chr3_3:74039909-74039928 Msa0471670:CDS 30.0%
! ACTTTTGCAAAACTTGTAGA+AGG - chr3_3:74040094-74040113 Msa0471670:CDS 30.0%
! TCTTTAAGAAATGTTCCTGT+AGG - chr3_3:74040135-74040154 Msa0471670:CDS 30.0%
TAATTATCCTCAGTTGTTTG+TGG + chr3_3:74040354-74040373 None:intergenic 30.0%
AGTGCAATGTATAATTCAAG+TGG - chr3_3:74040510-74040529 Msa0471670:CDS 30.0%
! CTTTGCAAGATTTTAAGCTT+GGG - chr3_3:74040538-74040557 Msa0471670:intron 30.0%
! TTTGCAAGATTTTAAGCTTG+GGG - chr3_3:74040539-74040558 Msa0471670:intron 30.0%
CAAGGGATTAATAATCAAGA+GGG - chr3_3:74040606-74040625 Msa0471670:intron 30.0%
ATTAATAATCAAGAGGGTTC+TGG - chr3_3:74040612-74040631 Msa0471670:intron 30.0%
AGTGAAGAAAGTGATAAACA+AGG - chr3_3:74040839-74040858 Msa0471670:intron 30.0%
GTGAAGAAAGTGATAAACAA+GGG - chr3_3:74040840-74040859 Msa0471670:intron 30.0%
TGAAGAAAGTGATAAACAAG+GGG - chr3_3:74040841-74040860 Msa0471670:intron 30.0%
!!! CTTTATCTTTTGGTAATGTG+GGG - chr3_3:74040941-74040960 Msa0471670:intron 30.0%
!!! TTTATCTTTTGGTAATGTGG+GGG - chr3_3:74040942-74040961 Msa0471670:intron 30.0%
ATCAGAACCACTAACAAAAT+AGG - chr3_3:74040995-74041014 Msa0471670:exon 30.0%
TCAGAACCACTAACAAAATA+GGG - chr3_3:74040996-74041015 Msa0471670:five_prime_UTR 30.0%
! TATGTACCCTATTTTGTTAG+TGG + chr3_3:74041005-74041024 None:intergenic 30.0%
ACTAACAAAATAGGGTACAT+AGG - chr3_3:74041004-74041023 Msa0471670:five_prime_UTR 30.0%
GAATTGGAATATAGTAGTAG+TGG + chr3_3:74039327-74039346 None:intergenic 30.0%
!!! CACTTTTTTCTAGTTTCTAG+AGG + chr3_3:74039388-74039407 None:intergenic 30.0%
! CTCTAGAAACTAGAAAAAAG+TGG - chr3_3:74039386-74039405 Msa0471670:three_prime_UTR 30.0%
GAAGGAAAGAAAACAGAAAA+AGG + chr3_3:74039514-74039533 None:intergenic 30.0%
!!! GAAATTTTTAGTTGAGGATC+AGG + chr3_3:74039672-74039691 None:intergenic 30.0%
! CTTTTTCTTGGGAAAAAGAA+AGG + chr3_3:74039772-74039791 None:intergenic 30.0%
AATTTAGGGGAATATTGGAT+TGG - chr3_3:74039909-74039928 Msa0471670:CDS 30.0%
! ACTTTTGCAAAACTTGTAGA+AGG - chr3_3:74040094-74040113 Msa0471670:CDS 30.0%
! TCTTTAAGAAATGTTCCTGT+AGG - chr3_3:74040135-74040154 Msa0471670:CDS 30.0%
TAATTATCCTCAGTTGTTTG+TGG + chr3_3:74040354-74040373 None:intergenic 30.0%
AGTGCAATGTATAATTCAAG+TGG - chr3_3:74040510-74040529 Msa0471670:CDS 30.0%
! CTTTGCAAGATTTTAAGCTT+GGG - chr3_3:74040538-74040557 Msa0471670:intron 30.0%
! TTTGCAAGATTTTAAGCTTG+GGG - chr3_3:74040539-74040558 Msa0471670:intron 30.0%
CAAGGGATTAATAATCAAGA+GGG - chr3_3:74040606-74040625 Msa0471670:intron 30.0%
ATTAATAATCAAGAGGGTTC+TGG - chr3_3:74040612-74040631 Msa0471670:intron 30.0%
AGTGAAGAAAGTGATAAACA+AGG - chr3_3:74040839-74040858 Msa0471670:intron 30.0%
GTGAAGAAAGTGATAAACAA+GGG - chr3_3:74040840-74040859 Msa0471670:intron 30.0%
TGAAGAAAGTGATAAACAAG+GGG - chr3_3:74040841-74040860 Msa0471670:intron 30.0%
!!! CTTTATCTTTTGGTAATGTG+GGG - chr3_3:74040941-74040960 Msa0471670:intron 30.0%
!!! TTTATCTTTTGGTAATGTGG+GGG - chr3_3:74040942-74040961 Msa0471670:intron 30.0%
ATCAGAACCACTAACAAAAT+AGG - chr3_3:74040995-74041014 Msa0471670:exon 30.0%
TCAGAACCACTAACAAAATA+GGG - chr3_3:74040996-74041015 Msa0471670:five_prime_UTR 30.0%
! TATGTACCCTATTTTGTTAG+TGG + chr3_3:74041005-74041024 None:intergenic 30.0%
ACTAACAAAATAGGGTACAT+AGG - chr3_3:74041004-74041023 Msa0471670:five_prime_UTR 30.0%
!!! AAGCTTTTGAGACTTGGAAT+TGG + chr3_3:74039343-74039362 None:intergenic 35.0%
!!! TGCATAAAGCTTTTGAGACT+TGG + chr3_3:74039349-74039368 None:intergenic 35.0%
AGGATCAGGAAAAGTAGTAA+AGG + chr3_3:74039658-74039677 None:intergenic 35.0%
!! GGATTGGTTAAACAAATGGA+TGG - chr3_3:74039925-74039944 Msa0471670:CDS 35.0%
! GCTTTTCTCTCTAACATAGA+AGG + chr3_3:74039976-74039995 None:intergenic 35.0%
CTATGTTAGAGAGAAAAGCA+AGG - chr3_3:74039977-74039996 Msa0471670:CDS 35.0%
!! ATCAAGCTTTAAACTGTCCA+AGG - chr3_3:74040010-74040029 Msa0471670:CDS 35.0%
!!! CAAGTTTTGCAAAAGTACCT+TGG + chr3_3:74040090-74040109 None:intergenic 35.0%
! GCAAAACTTGTAGAAGGTAT+TGG - chr3_3:74040100-74040119 Msa0471670:CDS 35.0%
TTAAGAAATGTTCCTGTAGG+TGG - chr3_3:74040138-74040157 Msa0471670:CDS 35.0%
TTGTCTTGATCAGTTGTGTA+AGG + chr3_3:74040405-74040424 None:intergenic 35.0%
AGACAAAACTACAAGTGCTA+TGG - chr3_3:74040419-74040438 Msa0471670:CDS 35.0%
TGAAAACTGCTTCTTCATCA+AGG - chr3_3:74040448-74040467 Msa0471670:CDS 35.0%
GAAAACTGCTTCTTCATCAA+GGG - chr3_3:74040449-74040468 Msa0471670:CDS 35.0%
AAAACTGCTTCTTCATCAAG+GGG - chr3_3:74040450-74040469 Msa0471670:CDS 35.0%
! GCTTTGCAAGATTTTAAGCT+TGG - chr3_3:74040537-74040556 Msa0471670:intron 35.0%
! TTTAAGCTTGGGGCTAATTT+TGG - chr3_3:74040549-74040568 Msa0471670:intron 35.0%
!!! GGGCTAATTTTGGTTTAGAA+GGG - chr3_3:74040559-74040578 Msa0471670:intron 35.0%
GCAAGGGATTAATAATCAAG+AGG - chr3_3:74040605-74040624 Msa0471670:intron 35.0%
AACTGATGATCATCTACAAC+AGG + chr3_3:74040678-74040697 None:intergenic 35.0%
CAGCAACAAATTCCAAATAG+TGG - chr3_3:74040711-74040730 Msa0471670:intron 35.0%
TGTTCAAACTCACCACTATT+TGG + chr3_3:74040726-74040745 None:intergenic 35.0%
CATCAGCAAAATAGAACTCA+AGG - chr3_3:74040744-74040763 Msa0471670:intron 35.0%
! AAGGTGATTCTACTGGTTAT+TGG - chr3_3:74040763-74040782 Msa0471670:intron 35.0%
! GATTCTACTGGTTATTGGAA+TGG - chr3_3:74040768-74040787 Msa0471670:intron 35.0%
GGTTATTGGAATGGAATGTT+CGG - chr3_3:74040777-74040796 Msa0471670:intron 35.0%
!!! AAGCTTTTGAGACTTGGAAT+TGG + chr3_3:74039343-74039362 None:intergenic 35.0%
!!! TGCATAAAGCTTTTGAGACT+TGG + chr3_3:74039349-74039368 None:intergenic 35.0%
AGGATCAGGAAAAGTAGTAA+AGG + chr3_3:74039658-74039677 None:intergenic 35.0%
!! GGATTGGTTAAACAAATGGA+TGG - chr3_3:74039925-74039944 Msa0471670:CDS 35.0%
! GCTTTTCTCTCTAACATAGA+AGG + chr3_3:74039976-74039995 None:intergenic 35.0%
CTATGTTAGAGAGAAAAGCA+AGG - chr3_3:74039977-74039996 Msa0471670:CDS 35.0%
!! ATCAAGCTTTAAACTGTCCA+AGG - chr3_3:74040010-74040029 Msa0471670:CDS 35.0%
!!! CAAGTTTTGCAAAAGTACCT+TGG + chr3_3:74040090-74040109 None:intergenic 35.0%
! GCAAAACTTGTAGAAGGTAT+TGG - chr3_3:74040100-74040119 Msa0471670:CDS 35.0%
TTAAGAAATGTTCCTGTAGG+TGG - chr3_3:74040138-74040157 Msa0471670:CDS 35.0%
TTGTCTTGATCAGTTGTGTA+AGG + chr3_3:74040405-74040424 None:intergenic 35.0%
AGACAAAACTACAAGTGCTA+TGG - chr3_3:74040419-74040438 Msa0471670:CDS 35.0%
TGAAAACTGCTTCTTCATCA+AGG - chr3_3:74040448-74040467 Msa0471670:CDS 35.0%
GAAAACTGCTTCTTCATCAA+GGG - chr3_3:74040449-74040468 Msa0471670:CDS 35.0%
AAAACTGCTTCTTCATCAAG+GGG - chr3_3:74040450-74040469 Msa0471670:CDS 35.0%
! GCTTTGCAAGATTTTAAGCT+TGG - chr3_3:74040537-74040556 Msa0471670:intron 35.0%
! TTTAAGCTTGGGGCTAATTT+TGG - chr3_3:74040549-74040568 Msa0471670:intron 35.0%
!!! GGGCTAATTTTGGTTTAGAA+GGG - chr3_3:74040559-74040578 Msa0471670:intron 35.0%
GCAAGGGATTAATAATCAAG+AGG - chr3_3:74040605-74040624 Msa0471670:intron 35.0%
AACTGATGATCATCTACAAC+AGG + chr3_3:74040678-74040697 None:intergenic 35.0%
CAGCAACAAATTCCAAATAG+TGG - chr3_3:74040711-74040730 Msa0471670:intron 35.0%
TGTTCAAACTCACCACTATT+TGG + chr3_3:74040726-74040745 None:intergenic 35.0%
CATCAGCAAAATAGAACTCA+AGG - chr3_3:74040744-74040763 Msa0471670:intron 35.0%
! AAGGTGATTCTACTGGTTAT+TGG - chr3_3:74040763-74040782 Msa0471670:intron 35.0%
! GATTCTACTGGTTATTGGAA+TGG - chr3_3:74040768-74040787 Msa0471670:intron 35.0%
GGTTATTGGAATGGAATGTT+CGG - chr3_3:74040777-74040796 Msa0471670:intron 35.0%
TCTTGGGAAAAAGAAAGGTG+TGG + chr3_3:74039767-74039786 None:intergenic 40.0%
! CTCTCTAACATAGAAGGTGT+TGG + chr3_3:74039970-74039989 None:intergenic 40.0%
GTGTTAGTTGAATTGCACCT+TGG + chr3_3:74040030-74040049 None:intergenic 40.0%
!! AAAAGTACCTTGGTTGTGAG+AGG + chr3_3:74040080-74040099 None:intergenic 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG - chr3_3:74040108-74040127 Msa0471670:CDS 40.0%
! GATTGAAGGTGATGATGATG+AGG + chr3_3:74040190-74040209 None:intergenic 40.0%
GGTTGTGATTGTGAGATTGA+AGG + chr3_3:74040204-74040223 None:intergenic 40.0%
! TTTTGTGCTGTAGCAAGATC+AGG + chr3_3:74040261-74040280 None:intergenic 40.0%
!!! GGTTTTGAGAAGCAGATTGA+GGG + chr3_3:74040290-74040309 None:intergenic 40.0%
CAAAACCCTAAGATCCATCA+AGG - chr3_3:74040303-74040322 Msa0471670:CDS 40.0%
! CTTGTCCTTGATGGATCTTA+GGG + chr3_3:74040311-74040330 None:intergenic 40.0%
! TCTTGTCCTTGATGGATCTT+AGG + chr3_3:74040312-74040331 None:intergenic 40.0%
GGTTAAGATCTTGTCCTTGA+TGG + chr3_3:74040320-74040339 None:intergenic 40.0%
!! TTGTTTGTGGTGGATAAGCT+AGG + chr3_3:74040341-74040360 None:intergenic 40.0%
TTATCCACCACAAACAACTG+AGG - chr3_3:74040344-74040363 Msa0471670:CDS 40.0%
TTATCCTCAGTTGTTTGTGG+TGG + chr3_3:74040351-74040370 None:intergenic 40.0%
CTAGACTCAGACAAAGTCAT+AGG + chr3_3:74040492-74040511 None:intergenic 40.0%
!!! GGGGCTAATTTTGGTTTAGA+AGG - chr3_3:74040558-74040577 Msa0471670:intron 40.0%
GGTTTAGAAGGGTTTGAGAA+TGG - chr3_3:74040570-74040589 Msa0471670:intron 40.0%
GAAGGGTTTGAGAATGGTTA+TGG - chr3_3:74040576-74040595 Msa0471670:intron 40.0%
! AATAATCAAGAGGGTTCTGG+TGG - chr3_3:74040615-74040634 Msa0471670:intron 40.0%
AGAACTCAAGGTGATTCTAC+TGG - chr3_3:74040756-74040775 Msa0471670:intron 40.0%
TATTGGAATGGAATGTTCGG+TGG - chr3_3:74040780-74040799 Msa0471670:intron 40.0%
TGGAGGATCATGGTAGATAA+TGG - chr3_3:74040800-74040819 Msa0471670:intron 40.0%
GAAAGTGATAAACAAGGGGT+TGG - chr3_3:74040845-74040864 Msa0471670:intron 40.0%
! GGGAGTGGAAGTTTGAAATT+TGG - chr3_3:74040962-74040981 Msa0471670:intron 40.0%
TCTTGGGAAAAAGAAAGGTG+TGG + chr3_3:74039767-74039786 None:intergenic 40.0%
! CTCTCTAACATAGAAGGTGT+TGG + chr3_3:74039970-74039989 None:intergenic 40.0%
GTGTTAGTTGAATTGCACCT+TGG + chr3_3:74040030-74040049 None:intergenic 40.0%
!! AAAAGTACCTTGGTTGTGAG+AGG + chr3_3:74040080-74040099 None:intergenic 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG - chr3_3:74040108-74040127 Msa0471670:CDS 40.0%
! GATTGAAGGTGATGATGATG+AGG + chr3_3:74040190-74040209 None:intergenic 40.0%
GGTTGTGATTGTGAGATTGA+AGG + chr3_3:74040204-74040223 None:intergenic 40.0%
! TTTTGTGCTGTAGCAAGATC+AGG + chr3_3:74040261-74040280 None:intergenic 40.0%
!!! GGTTTTGAGAAGCAGATTGA+GGG + chr3_3:74040290-74040309 None:intergenic 40.0%
CAAAACCCTAAGATCCATCA+AGG - chr3_3:74040303-74040322 Msa0471670:CDS 40.0%
! CTTGTCCTTGATGGATCTTA+GGG + chr3_3:74040311-74040330 None:intergenic 40.0%
! TCTTGTCCTTGATGGATCTT+AGG + chr3_3:74040312-74040331 None:intergenic 40.0%
GGTTAAGATCTTGTCCTTGA+TGG + chr3_3:74040320-74040339 None:intergenic 40.0%
!! TTGTTTGTGGTGGATAAGCT+AGG + chr3_3:74040341-74040360 None:intergenic 40.0%
TTATCCACCACAAACAACTG+AGG - chr3_3:74040344-74040363 Msa0471670:CDS 40.0%
TTATCCTCAGTTGTTTGTGG+TGG + chr3_3:74040351-74040370 None:intergenic 40.0%
CTAGACTCAGACAAAGTCAT+AGG + chr3_3:74040492-74040511 None:intergenic 40.0%
!!! GGGGCTAATTTTGGTTTAGA+AGG - chr3_3:74040558-74040577 Msa0471670:intron 40.0%
GGTTTAGAAGGGTTTGAGAA+TGG - chr3_3:74040570-74040589 Msa0471670:intron 40.0%
GAAGGGTTTGAGAATGGTTA+TGG - chr3_3:74040576-74040595 Msa0471670:intron 40.0%
! AATAATCAAGAGGGTTCTGG+TGG - chr3_3:74040615-74040634 Msa0471670:intron 40.0%
AGAACTCAAGGTGATTCTAC+TGG - chr3_3:74040756-74040775 Msa0471670:intron 40.0%
TATTGGAATGGAATGTTCGG+TGG - chr3_3:74040780-74040799 Msa0471670:intron 40.0%
TGGAGGATCATGGTAGATAA+TGG - chr3_3:74040800-74040819 Msa0471670:intron 40.0%
GAAAGTGATAAACAAGGGGT+TGG - chr3_3:74040845-74040864 Msa0471670:intron 40.0%
! GGGAGTGGAAGTTTGAAATT+TGG - chr3_3:74040962-74040981 Msa0471670:intron 40.0%
AATCTATGGACACAGCTCAG+TGG - chr3_3:74039470-74039489 Msa0471670:three_prime_UTR 45.0%
ATCTATGGACACAGCTCAGT+GGG - chr3_3:74039471-74039490 Msa0471670:three_prime_UTR 45.0%
ACTATAGCCTCTCACAACCA+AGG - chr3_3:74040070-74040089 Msa0471670:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+TGG - chr3_3:74040111-74040130 Msa0471670:CDS 45.0%
AGAAATGTTCCTGTAGGTGG+TGG - chr3_3:74040141-74040160 Msa0471670:CDS 45.0%
TTTCTTGAACCACCACCTAC+AGG + chr3_3:74040153-74040172 None:intergenic 45.0%
!!! GGGTTTTGAGAAGCAGATTG+AGG + chr3_3:74040291-74040310 None:intergenic 45.0%
GGGTTTGAGAATGGTTATGG+TGG - chr3_3:74040579-74040598 Msa0471670:intron 45.0%
! AATGGTTATGGTGGCTTGCA+AGG - chr3_3:74040588-74040607 Msa0471670:intron 45.0%
! ATGGTTATGGTGGCTTGCAA+GGG - chr3_3:74040589-74040608 Msa0471670:intron 45.0%
AATCTATGGACACAGCTCAG+TGG - chr3_3:74039470-74039489 Msa0471670:three_prime_UTR 45.0%
ATCTATGGACACAGCTCAGT+GGG - chr3_3:74039471-74039490 Msa0471670:three_prime_UTR 45.0%
ACTATAGCCTCTCACAACCA+AGG - chr3_3:74040070-74040089 Msa0471670:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+TGG - chr3_3:74040111-74040130 Msa0471670:CDS 45.0%
AGAAATGTTCCTGTAGGTGG+TGG - chr3_3:74040141-74040160 Msa0471670:CDS 45.0%
TTTCTTGAACCACCACCTAC+AGG + chr3_3:74040153-74040172 None:intergenic 45.0%
!!! GGGTTTTGAGAAGCAGATTG+AGG + chr3_3:74040291-74040310 None:intergenic 45.0%
GGGTTTGAGAATGGTTATGG+TGG - chr3_3:74040579-74040598 Msa0471670:intron 45.0%
! AATGGTTATGGTGGCTTGCA+AGG - chr3_3:74040588-74040607 Msa0471670:intron 45.0%
! ATGGTTATGGTGGCTTGCAA+GGG - chr3_3:74040589-74040608 Msa0471670:intron 45.0%
!! TTATTATTATTGAAAAATTT+AGG - chr3_3:74039894-74039913 Msa0471670:CDS 5.0%
!! TATTATTATTGAAAAATTTA+GGG - chr3_3:74039895-74039914 Msa0471670:CDS 5.0%
!! TTATTATTATTGAAAAATTT+AGG - chr3_3:74039894-74039913 Msa0471670:CDS 5.0%
!! TATTATTATTGAAAAATTTA+GGG - chr3_3:74039895-74039914 Msa0471670:CDS 5.0%
! AATCAAGAGGGTTCTGGTGG+TGG - chr3_3:74040618-74040637 Msa0471670:intron 50.0%
! TGGAATGGAATGTTCGGTGG+AGG - chr3_3:74040783-74040802 Msa0471670:intron 50.0%
! GAATGTTCGGTGGAGGATCA+TGG - chr3_3:74040790-74040809 Msa0471670:intron 50.0%
!!! CTTTTGGTAATGTGGGGGAG+TGG - chr3_3:74040947-74040966 Msa0471670:intron 50.0%
! AATCAAGAGGGTTCTGGTGG+TGG - chr3_3:74040618-74040637 Msa0471670:intron 50.0%
! TGGAATGGAATGTTCGGTGG+AGG - chr3_3:74040783-74040802 Msa0471670:intron 50.0%
! GAATGTTCGGTGGAGGATCA+TGG - chr3_3:74040790-74040809 Msa0471670:intron 50.0%
!!! CTTTTGGTAATGTGGGGGAG+TGG - chr3_3:74040947-74040966 Msa0471670:intron 50.0%
!! CAAGAGGGTTCTGGTGGTGG+TGG - chr3_3:74040621-74040640 Msa0471670:intron 60.0%
!! CAAGAGGGTTCTGGTGGTGG+TGG - chr3_3:74040621-74040640 Msa0471670:intron 60.0%
GGACACAGCTCAGTGGGCAC+AGG - chr3_3:74039477-74039496 Msa0471670:three_prime_UTR 65.0%
!! GAGGGTTCTGGTGGTGGTGG+TGG - chr3_3:74040624-74040643 Msa0471670:intron 65.0%
!! GGTTCTGGTGGTGGTGGTGG+TGG - chr3_3:74040627-74040646 Msa0471670:intron 65.0%
!! TCTGGTGGTGGTGGTGGTGG+TGG - chr3_3:74040630-74040649 Msa0471670:intron 65.0%
!! GTGGTGGTGGTGGTGGTGCA+AGG - chr3_3:74040643-74040662 Msa0471670:intron 65.0%
GGACACAGCTCAGTGGGCAC+AGG - chr3_3:74039477-74039496 Msa0471670:three_prime_UTR 65.0%
!! GAGGGTTCTGGTGGTGGTGG+TGG - chr3_3:74040624-74040643 Msa0471670:intron 65.0%
!! GGTTCTGGTGGTGGTGGTGG+TGG - chr3_3:74040627-74040646 Msa0471670:intron 65.0%
!! TCTGGTGGTGGTGGTGGTGG+TGG - chr3_3:74040630-74040649 Msa0471670:intron 65.0%
!! GTGGTGGTGGTGGTGGTGCA+AGG - chr3_3:74040643-74040662 Msa0471670:intron 65.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr3_3:74040633-74040652 Msa0471670:intron 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr3_3:74040633-74040652 Msa0471670:intron 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr3_3:74040633-74040652 Msa0471670:intron 70.0%
!! GGTGGTGGTGGTGGTGGTGG+TGG - chr3_3:74040633-74040652 Msa0471670:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 74039322 74041148 74039322 ID=Msa0471670;Name=Msa0471670
chr3_3 mRNA 74039322 74041148 74039322 ID=Msa0471670-mRNA-1;Parent=Msa0471670;Name=Msa0471670-mRNA-1;_AED=0.00;_eAED=0.00;_QI=153|1|1|1|0|0|2|333|307
chr3_3 exon 74039322 74040554 74039322 ID=Msa0471670-mRNA-1:exon:18860;Parent=Msa0471670-mRNA-1
chr3_3 exon 74040972 74041148 74040972 ID=Msa0471670-mRNA-1:exon:18859;Parent=Msa0471670-mRNA-1
chr3_3 five_prime_UTR 74040996 74041148 74040996 ID=Msa0471670-mRNA-1:five_prime_utr;Parent=Msa0471670-mRNA-1
chr3_3 CDS 74040972 74040995 74040972 ID=Msa0471670-mRNA-1:cds;Parent=Msa0471670-mRNA-1
chr3_3 CDS 74039655 74040554 74039655 ID=Msa0471670-mRNA-1:cds;Parent=Msa0471670-mRNA-1
chr3_3 three_prime_UTR 74039322 74039654 74039322 ID=Msa0471670-mRNA-1:three_prime_utr;Parent=Msa0471670-mRNA-1
Gene Sequence

>Msa0471670

ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGATTGGTTAAACAAATGGATGGATCAACTTCAAATTCAAAACCAACACCTTCTATGTTAGAGAGAAAAGCAAGGCCACAAAAAGATCAAGCTTTAAACTGTCCAAGGTGCAATTCAACTAACACAAAATTCTGTTACTACAATAACTATAGCCTCTCACAACCAAGGTACTTTTGCAAAACTTGTAGAAGGTATTGGACTGAAGGTGGTTCTTTAAGAAATGTTCCTGTAGGTGGTGGTTCAAGAAAAAACAAAAGATCAACCTCATCATCATCACCTTCAATCTCACAATCACAACCTCCATCATCAATAACAAAAAATATTATCATTAATCCTGATCTTGCTACAGCACAAAATAATTTCCCTCAATCTGCTTCTCAAAACCCTAAGATCCATCAAGGACAAGATCTTAACCTAGCTTATCCACCACAAACAACTGAGGATAATTATAATACCATATCTAAATTCATTGAGCTTCCTTACACAACTGATCAAGACAAAACTACAAGTGCTATGGAGCTTCTGAAAACTGCTTCTTCATCAAGGGGTTTGAATTCTTTTATGCCTATGACTTTGTCTGAGTCTAGTGCAATGTATAATTCAAGTGGTTTTGCTTTGCAAGATTTTAAGCTTGGGGCTAATTTTGGTTTAGAAGGGTTTGAGAATGGTTATGGTGGCTTGCAAGGGATTAATAATCAAGAGGGTTCTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCAAGGATGTTGTTTCCTGTTGTAGATGATCATCAGTTGAATAATAAGCAGCAGCAACAAATTCCAAATAGTGGTGAGTTTGAACATCAGCAAAATAGAACTCAAGGTGATTCTACTGGTTATTGGAATGGAATGTTCGGTGGAGGATCATGGTAG

Protein sequence

>Msa0471670

MDTAQWAQGNIGLVKQMDGSTSNSKPTPSMLERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSTSSSSPSISQSQPPSSITKNIIINPDLATAQNNFPQSASQNPKIHQGQDLNLAYPPQTTEDNYNTISKFIELPYTTDQDKTTSAMELLKTASSSRGLNSFMPMTLSESSAMYNSSGFALQDFKLGANFGLEGFENGYGGLQGINNQEGSGGGGGGGGGARMLFPVVDDHQLNNKQQQQIPNSGEFEHQQNRTQGDSTGYWNGMFGGGSW*