Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621190 | XP_003602573.1 | 98.662 | 299 | 4 | 0 | 1 | 299 | 1 | 299 | 0.0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621190 | sp|O65751|RSSA_CICAR | 89.333 | 300 | 31 | 1 | 1 | 299 | 1 | 300 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621190 | G7JB01 | 98.662 | 299 | 4 | 0 | 1 | 299 | 1 | 299 | 0.0 | 613 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0621190 | 0.810112 | 1.355449e-50 | -8.615850e-47 |
| Msa0003030 | Msa0621190 | 0.879723 | 9.870849e-70 | -8.615850e-47 |
| Msa0003330 | Msa0621190 | 0.847830 | 9.021882e-60 | -8.615850e-47 |
| Msa0006470 | Msa0621190 | -0.800133 | 1.662665e-48 | -8.615850e-47 |
| Msa0016440 | Msa0621190 | 0.819774 | 9.732784e-53 | -8.615850e-47 |
| Msa0020870 | Msa0621190 | 0.842893 | 1.957949e-58 | -8.615850e-47 |
| Msa0021980 | Msa0621190 | -0.802970 | 4.356206e-49 | -8.615850e-47 |
| Msa0025690 | Msa0621190 | -0.810643 | 1.040820e-50 | -8.615850e-47 |
| Msa0026270 | Msa0621190 | 0.829708 | 4.426441e-55 | -8.615850e-47 |
| Msa0027590 | Msa0621190 | 0.807110 | 5.930761e-50 | -8.615850e-47 |
| Msa0029730 | Msa0621190 | 0.802377 | 5.773838e-49 | -8.615850e-47 |
| Msa0042510 | Msa0621190 | 0.919917 | 2.468035e-87 | -8.615850e-47 |
| Msa0065330 | Msa0621190 | 0.812637 | 3.835613e-51 | -8.615850e-47 |
| Msa0071640 | Msa0621190 | 0.814001 | 1.924119e-51 | -8.615850e-47 |
| Msa0079560 | Msa0621190 | 0.910727 | 1.354851e-82 | -8.615850e-47 |
| Msa0094210 | Msa0621190 | 0.834739 | 2.517918e-56 | -8.615850e-47 |
| Msa0094940 | Msa0621190 | 0.807597 | 4.677814e-50 | -8.615850e-47 |
| Msa0116600 | Msa0621190 | 0.849929 | 2.357631e-60 | -8.615850e-47 |
| Msa0116690 | Msa0621190 | 0.839220 | 1.805144e-57 | -8.615850e-47 |
| Msa0602900 | Msa0621190 | 0.820209 | 7.741471e-53 | -8.615850e-47 |
| Msa0609120 | Msa0621190 | 0.832715 | 8.069226e-56 | -8.615850e-47 |
| Msa0610380 | Msa0621190 | 0.838106 | 3.502550e-57 | -8.615850e-47 |
| Msa0619230 | Msa0621190 | 0.902985 | 5.531424e-79 | -8.615850e-47 |
| Msa0621170 | Msa0621190 | 0.829645 | 4.585403e-55 | -8.615850e-47 |
| Msa0621190 | Msa0641030 | -0.824535 | 7.656863e-54 | -8.615850e-47 |
| Msa0621190 | Msa0643960 | 0.814920 | 1.204726e-51 | -8.615850e-47 |
| Msa0621190 | Msa0650910 | 0.838805 | 2.312338e-57 | -8.615850e-47 |
| Msa0621190 | Msa0656450 | 0.899080 | 2.823615e-77 | -8.615850e-47 |
| Msa0621190 | Msa0664020 | -0.807304 | 5.396411e-50 | -8.615850e-47 |
| Msa0621190 | Msa0679560 | -0.813534 | 2.437636e-51 | -8.615850e-47 |
| Msa0621190 | Msa0691760 | 0.905701 | 3.251040e-80 | -8.615850e-47 |
| Msa0621190 | Msa0694400 | 0.819025 | 1.442320e-52 | -8.615850e-47 |
| Msa0621190 | Msa0700370 | 0.920322 | 1.482419e-87 | -8.615850e-47 |
| Msa0621190 | Msa0708630 | 0.831049 | 2.080551e-55 | -8.615850e-47 |
| Msa0621190 | Msa0709380 | 0.838775 | 2.353959e-57 | -8.615850e-47 |
| Msa0621190 | Msa0738420 | 0.814044 | 1.882722e-51 | -8.615850e-47 |
| Msa0621190 | Msa0758420 | 0.807535 | 4.821064e-50 | -8.615850e-47 |
| Msa0621190 | Msa0788960 | 0.819796 | 9.623759e-53 | -8.615850e-47 |
| Msa0621190 | Msa0790450 | 0.840525 | 8.251055e-58 | -8.615850e-47 |
| Msa0621190 | Msa0834220 | 0.821323 | 4.291150e-53 | -8.615850e-47 |
| Msa0621190 | Msa0880050 | 0.846410 | 2.209821e-59 | -8.615850e-47 |
| Msa0621190 | Msa0881240 | 0.811995 | 5.297541e-51 | -8.615850e-47 |
| Msa0621190 | Msa0912470 | -0.800133 | 1.662445e-48 | -8.615850e-47 |
| Msa0621190 | Msa0929700 | 0.861598 | 9.166099e-64 | -8.615850e-47 |
| Msa0621190 | Msa0930360 | 0.936703 | 1.134860e-97 | -8.615850e-47 |
| Msa0621190 | Msa0930790 | 0.884046 | 2.679377e-71 | -8.615850e-47 |
| Msa0621190 | Msa0987570 | 0.847143 | 1.392947e-59 | -8.615850e-47 |
| Msa0621190 | Msa0998890 | 0.855018 | 8.360505e-62 | -8.615850e-47 |
| Msa0621190 | Msa1035040 | 0.807908 | 4.017318e-50 | -8.615850e-47 |
| Msa0621190 | Msa1037030 | 0.839996 | 1.134169e-57 | -8.615850e-47 |
| Msa0621190 | Msa1041830 | 0.840541 | 8.170052e-58 | -8.615850e-47 |
| Msa0621190 | Msa1081530 | -0.800867 | 1.178215e-48 | -8.615850e-47 |
| Msa0621190 | Msa1082050 | 0.865055 | 7.789639e-65 | -8.615850e-47 |
| Msa0621190 | Msa1085850 | 0.802404 | 5.701856e-49 | -8.615850e-47 |
| Msa0621190 | Msa1124980 | 0.868295 | 7.261924e-66 | -8.615850e-47 |
| Msa0621190 | Msa1125530 | -0.810115 | 1.353479e-50 | -8.615850e-47 |
| Msa0621190 | Msa1126690 | 0.833963 | 3.942105e-56 | -8.615850e-47 |
| Msa0621190 | Msa1144630 | 0.892410 | 1.629388e-74 | -8.615850e-47 |
| Msa0621190 | Msa1156830 | 0.835423 | 1.692727e-56 | -8.615850e-47 |
| Msa0621190 | Msa1164520 | 0.806871 | 6.664007e-50 | -8.615850e-47 |
| Msa0621190 | Msa1165700 | 0.880266 | 6.323938e-70 | -8.615850e-47 |
| Msa0621190 | Msa1167360 | 0.850703 | 1.430729e-60 | -8.615850e-47 |
| Msa0621190 | Msa1189540 | 0.806433 | 8.246617e-50 | -8.615850e-47 |
| Msa0621190 | Msa1209560 | -0.826221 | 3.055893e-54 | -8.615850e-47 |
| Msa0621190 | Msa1213850 | 0.831287 | 1.818404e-55 | -8.615850e-47 |
| Msa0621190 | Msa1225040 | 0.822447 | 2.357680e-53 | -8.615850e-47 |
| Msa0621190 | Msa1227350 | 0.863860 | 1.840745e-64 | -8.615850e-47 |
| Msa0621190 | Msa1235950 | 0.860438 | 2.065062e-63 | -8.615850e-47 |
| Msa0621190 | Msa1235980 | 0.865282 | 6.611120e-65 | -8.615850e-47 |
| Msa0621190 | Msa1237040 | 0.856510 | 3.064876e-62 | -8.615850e-47 |
| Msa0621190 | Msa1245270 | 0.823923 | 1.066472e-53 | -8.615850e-47 |
| Msa0621190 | Msa1246040 | -0.816323 | 5.868556e-52 | -8.615850e-47 |
| Msa0621190 | Msa1261970 | 0.811439 | 6.996914e-51 | -8.615850e-47 |
| Msa0621190 | Msa1284800 | 0.889286 | 2.774527e-73 | -8.615850e-47 |
| Msa0621190 | Msa1298910 | -0.819118 | 1.373881e-52 | -8.615850e-47 |
| Msa0621190 | Msa1316100 | 0.836815 | 7.502155e-57 | -8.615850e-47 |
| Msa0621190 | Msa1317390 | 0.886214 | 4.153925e-72 | -8.615850e-47 |
| Msa0621190 | Msa1329930 | 0.834800 | 2.431245e-56 | -8.615850e-47 |
| Msa0621190 | Msa1330530 | -0.823534 | 1.315549e-53 | -8.615850e-47 |
| Msa0621190 | Msa1351020 | 0.842504 | 2.484206e-58 | -8.615850e-47 |
| Msa0621190 | Msa1363910 | 0.816128 | 6.486746e-52 | -8.615850e-47 |
| Msa0621190 | Msa1363930 | 0.892408 | 1.631280e-74 | -8.615850e-47 |
| Msa0621190 | Msa1366540 | 0.871721 | 5.509315e-67 | -8.615850e-47 |
| Msa0621190 | Msa1370630 | -0.802546 | 5.329482e-49 | -8.615850e-47 |
| Msa0621190 | Msa1387750 | 0.979203 | 1.869849e-147 | -8.615850e-47 |
| Msa0621190 | Msa1390760 | 0.905136 | 5.899631e-80 | -8.615850e-47 |
| Msa0621190 | Msa1403520 | 0.844053 | 9.593426e-59 | -8.615850e-47 |
| Msa0621190 | Msa1407550 | 0.871970 | 4.553198e-67 | -8.615850e-47 |
| Msa0621190 | Msa1413570 | 0.897696 | 1.094951e-76 | -8.615850e-47 |
| Msa0621190 | Msa1423050 | 0.843885 | 1.063828e-58 | -8.615850e-47 |
| Msa0621190 | Msa1432310 | 0.835665 | 1.470344e-56 | -8.615850e-47 |
| Msa0621190 | Msa1445250 | -0.809167 | 2.162803e-50 | -8.615850e-47 |
| Msa0621190 | Msa1446510 | 0.873771 | 1.135669e-67 | -8.615850e-47 |
| Msa0621190 | Msa1450560 | 0.843167 | 1.654600e-58 | -8.615850e-47 |
| Msa0621190 | Msa1453380 | 0.802411 | 5.681453e-49 | -8.615850e-47 |
| Msa0621190 | Msa1453530 | 0.840614 | 7.818126e-58 | -8.615850e-47 |
| Msa0621190 | Msa1457450 | -0.815224 | 1.031592e-51 | -8.615850e-47 |
| Msa0621190 | Msa1463510 | 0.873529 | 1.370120e-67 | -8.615850e-47 |
| Msa0621190 | Msa1465700 | 0.872301 | 3.532572e-67 | -8.615850e-47 |
| Msa0621190 | Msa1465890 | 0.955576 | 2.203510e-113 | -8.615850e-47 |
| Msa0127230 | Msa0621190 | 0.906908 | 8.963899e-81 | -8.615850e-47 |
| Msa0128320 | Msa0621190 | 0.804734 | 1.874037e-49 | -8.615850e-47 |
| Msa0132460 | Msa0621190 | 0.829735 | 4.358235e-55 | -8.615850e-47 |
| Msa0146910 | Msa0621190 | 0.878612 | 2.438730e-69 | -8.615850e-47 |
| Msa0159870 | Msa0621190 | 0.808488 | 3.021559e-50 | -8.615850e-47 |
| Msa0167860 | Msa0621190 | 0.829235 | 5.765312e-55 | -8.615850e-47 |
| Msa0168320 | Msa0621190 | 0.892587 | 1.383213e-74 | -8.615850e-47 |
| Msa0172300 | Msa0621190 | 0.805711 | 1.169860e-49 | -8.615850e-47 |
| Msa0177940 | Msa0621190 | 0.812206 | 4.763622e-51 | -8.615850e-47 |
| Msa0182050 | Msa0621190 | 0.834374 | 3.110438e-56 | -8.615850e-47 |
| Msa0182100 | Msa0621190 | 0.862583 | 4.572441e-64 | -8.615850e-47 |
| Msa0188740 | Msa0621190 | 0.861009 | 1.386214e-63 | -8.615850e-47 |
| Msa0192300 | Msa0621190 | 0.894824 | 1.714130e-75 | -8.615850e-47 |
| Msa0195030 | Msa0621190 | 0.844679 | 6.512209e-59 | -8.615850e-47 |
| Msa0216200 | Msa0621190 | 0.812916 | 3.331351e-51 | -8.615850e-47 |
| Msa0219090 | Msa0621190 | 0.812744 | 3.634201e-51 | -8.615850e-47 |
| Msa0225370 | Msa0621190 | -0.810452 | 1.144472e-50 | -8.615850e-47 |
| Msa0233550 | Msa0621190 | 0.868753 | 5.164258e-66 | -8.615850e-47 |
| Msa0237180 | Msa0621190 | 0.835400 | 1.715206e-56 | -8.615850e-47 |
| Msa0371490 | Msa0621190 | 0.884044 | 2.682250e-71 | -8.615850e-47 |
| Msa0373350 | Msa0621190 | 0.873906 | 1.022717e-67 | -8.615850e-47 |
| Msa0376850 | Msa0621190 | 0.879188 | 1.527976e-69 | -8.615850e-47 |
| Msa0377370 | Msa0621190 | 0.812803 | 3.527357e-51 | -8.615850e-47 |
| Msa0377520 | Msa0621190 | 0.830529 | 2.790410e-55 | -8.615850e-47 |
| Msa0377610 | Msa0621190 | 0.853208 | 2.781949e-61 | -8.615850e-47 |
| Msa0379850 | Msa0621190 | -0.803761 | 2.986906e-49 | -8.615850e-47 |
| Msa0380590 | Msa0621190 | 0.811915 | 5.512652e-51 | -8.615850e-47 |
| Msa0382670 | Msa0621190 | 0.901352 | 2.923352e-78 | -8.615850e-47 |
| Msa0387290 | Msa0621190 | 0.896369 | 3.939961e-76 | -8.615850e-47 |
| Msa0388520 | Msa0621190 | 0.901220 | 3.340887e-78 | -8.615850e-47 |
| Msa0388540 | Msa0621190 | 0.819676 | 1.024887e-52 | -8.615850e-47 |
| Msa0416470 | Msa0621190 | 0.882926 | 6.913221e-71 | -8.615850e-47 |
| Msa0421920 | Msa0621190 | 0.869490 | 2.977883e-66 | -8.615850e-47 |
| Msa0426090 | Msa0621190 | 0.816550 | 5.219642e-52 | -8.615850e-47 |
| Msa0426820 | Msa0621190 | 0.872984 | 2.089106e-67 | -8.615850e-47 |
| Msa0426940 | Msa0621190 | 0.840686 | 7.486878e-58 | -8.615850e-47 |
| Msa0427380 | Msa0621190 | 0.824225 | 9.057307e-54 | -8.615850e-47 |
| Msa0467740 | Msa0621190 | 0.895538 | 8.713889e-76 | -8.615850e-47 |
| Msa0470230 | Msa0621190 | 0.810843 | 9.420250e-51 | -8.615850e-47 |
| Msa0472480 | Msa0621190 | 0.826909 | 2.094102e-54 | -8.615850e-47 |
| Msa0477670 | Msa0621190 | 0.842399 | 2.647952e-58 | -8.615850e-47 |
| Msa0239420 | Msa0621190 | 0.868791 | 5.020901e-66 | -8.615850e-47 |
| Msa0256350 | Msa0621190 | 0.840696 | 7.441512e-58 | -8.615850e-47 |
| Msa0256410 | Msa0621190 | -0.801170 | 1.021441e-48 | -8.615850e-47 |
| Msa0266380 | Msa0621190 | -0.822869 | 1.880342e-53 | -8.615850e-47 |
| Msa0270160 | Msa0621190 | 0.847183 | 1.359032e-59 | -8.615850e-47 |
| Msa0274940 | Msa0621190 | 0.856331 | 3.457835e-62 | -8.615850e-47 |
| Msa0278540 | Msa0621190 | 0.815407 | 9.394010e-52 | -8.615850e-47 |
| Msa0295850 | Msa0621190 | -0.810862 | 9.332241e-51 | -8.615850e-47 |
| Msa0301250 | Msa0621190 | 0.894197 | 3.092986e-75 | -8.615850e-47 |
| Msa0304270 | Msa0621190 | 0.835483 | 1.634196e-56 | -8.615850e-47 |
| Msa0304310 | Msa0621190 | 0.836681 | 8.113925e-57 | -8.615850e-47 |
| Msa0313060 | Msa0621190 | 0.877504 | 5.960202e-69 | -8.615850e-47 |
| Msa0315660 | Msa0621190 | 0.837159 | 6.128619e-57 | -8.615850e-47 |
| Msa0334170 | Msa0621190 | -0.840283 | 9.545992e-58 | -8.615850e-47 |
| Msa0341520 | Msa0621190 | -0.827744 | 1.320944e-54 | -8.615850e-47 |
| Msa0341860 | Msa0621190 | -0.816563 | 5.183823e-52 | -8.615850e-47 |
| Msa0485220 | Msa0621190 | 0.849023 | 4.219799e-60 | -8.615850e-47 |
| Msa0500420 | Msa0621190 | 0.815444 | 9.215152e-52 | -8.615850e-47 |
| Msa0511760 | Msa0621190 | 0.891663 | 3.234721e-74 | -8.615850e-47 |
| Msa0514130 | Msa0621190 | 0.891059 | 5.608001e-74 | -8.615850e-47 |
| Msa0516830 | Msa0621190 | 0.878578 | 2.506846e-69 | -8.615850e-47 |
| Msa0521730 | Msa0621190 | 0.812881 | 3.391149e-51 | -8.615850e-47 |
| Msa0527900 | Msa0621190 | -0.816198 | 6.256755e-52 | -8.615850e-47 |
| Msa0544930 | Msa0621190 | -0.819702 | 1.011206e-52 | -8.615850e-47 |
| Msa0547920 | Msa0621190 | 0.809823 | 1.563791e-50 | -8.615850e-47 |
| Msa0573550 | Msa0621190 | 0.859861 | 3.084377e-63 | -8.615850e-47 |
| Msa0574780 | Msa0621190 | 0.851495 | 8.551901e-61 | -8.615850e-47 |
| Msa0578010 | Msa0621190 | 0.875222 | 3.653062e-68 | -8.615850e-47 |
| Msa0586150 | Msa0621190 | -0.804217 | 2.401238e-49 | -8.615850e-47 |
| Msa0597240 | Msa0621190 | 0.836380 | 9.680104e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621190 | MtrunA17_Chr3g0129861 | 98.662 | 299 | 4 | 0 | 1 | 299 | 1 | 299 | 0.0 | 613 |
| Msa0621190 | MtrunA17_Chr7g0268451 | 93.174 | 293 | 18 | 2 | 9 | 299 | 5 | 297 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621190 | AT3G04770.2 | 75.986 | 279 | 49 | 6 | 7 | 275 | 9 | 279 | 7.66e-149 | 419 |
| Msa0621190 | AT1G72370.2 | 82.591 | 247 | 40 | 3 | 1 | 244 | 1 | 247 | 5.12e-145 | 409 |
| Msa0621190 | AT1G72370.1 | 82.591 | 247 | 40 | 3 | 1 | 244 | 1 | 247 | 6.10e-145 | 409 |
| Msa0621190 | AT3G04770.1 | 88.832 | 197 | 22 | 0 | 7 | 203 | 9 | 205 | 5.35e-131 | 375 |
Find 120 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCCCCGAAAGTAAAATT+TGG | 0.168322 | 4_2:-73151770 | Msa0621190:three_prime_UTR |
| AAATGTTCTTTACCAGCTTC+TGG | 0.204965 | 4_2:+73152209 | None:intergenic |
| CTCTTGCTCCTTGGCCTCTT+CGG | 0.208222 | 4_2:+73152382 | None:intergenic |
| TTCTTTCAGTTGCAGGGGAC+TGG | 0.226869 | 4_2:-73151915 | Msa0621190:intron |
| ATAGCATCGGTTGTCTCTTT+TGG | 0.249875 | 4_2:-73152628 | Msa0621190:CDS |
| CAGCAGCTCCTGGTGTCAAC+TGG | 0.259408 | 4_2:-73152238 | Msa0621190:CDS |
| GAAATTAAACCATGGTTAAC+TGG | 0.291720 | 4_2:+73151563 | None:intergenic |
| TTCACCTGATGGTCAGTTCT+AGG | 0.303947 | 4_2:+73152908 | None:intergenic |
| GTTCAATCTGCAAGGCCTTA+TGG | 0.305597 | 4_2:-73153061 | Msa0621190:CDS |
| CAATTTGGCAGCTAGGGTTT+TGG | 0.305738 | 4_2:+73154107 | None:intergenic |
| TCTTGCTCCTTGGCCTCTTC+GGG | 0.307675 | 4_2:+73152383 | None:intergenic |
| GGTATTTATATCATTAATCT+TGG | 0.324341 | 4_2:-73153154 | Msa0621190:CDS |
| TCTTTCAGTTGCAGGGGACT+GGG | 0.335061 | 4_2:-73151914 | Msa0621190:intron |
| GAAGGAAACTTGCATTTGAT+TGG | 0.347451 | 4_2:+73152961 | None:intergenic |
| GGTGCTTTGATTTCTTGTAT+AGG | 0.348810 | 4_2:-73151496 | Msa0621190:three_prime_UTR |
| TTCATCCTCCTCTTGCTCCT+TGG | 0.369266 | 4_2:+73152373 | None:intergenic |
| ATTTGATTGGTAAAGGTTCC+AGG | 0.371234 | 4_2:+73152974 | None:intergenic |
| GGCACTCTGTGATAACAATT+TGG | 0.372842 | 4_2:+73154092 | None:intergenic |
| ATTTCGCCTCCACTTGTGTT+TGG | 0.381770 | 4_2:-73151614 | Msa0621190:three_prime_UTR |
| GCTGTCACAGATTCAATTCC+AGG | 0.382679 | 4_2:+73151856 | None:intergenic |
| CATCAGCAGCCAACATCATC+TGG | 0.391970 | 4_2:+73153962 | None:intergenic |
| ATTGAATCTGTGACAGCAAC+TGG | 0.400686 | 4_2:-73151850 | Msa0621190:CDS |
| TCCAAGAGCAGCTTCCTTGA+TGG | 0.403359 | 4_2:+73152736 | None:intergenic |
| CCCATCAAGGAAGCTGCTCT+TGG | 0.405552 | 4_2:-73152737 | Msa0621190:CDS |
| AATGTTCTTTACCAGCTTCT+GGG | 0.407962 | 4_2:+73152210 | None:intergenic |
| ACACCAGGAGCTGCTGGAAT+AGG | 0.410453 | 4_2:+73152245 | None:intergenic |
| TGCTTTCCCTTGTTGTTAGC+GGG | 0.413093 | 4_2:+73152650 | None:intergenic |
| CCAAGAGCAGCTTCCTTGAT+GGG | 0.417623 | 4_2:+73152737 | None:intergenic |
| TGAAGCAATAACGTTCCATT+TGG | 0.418662 | 4_2:+73153911 | None:intergenic |
| CTTCCCCGAAAGTAAAATTT+GGG | 0.451056 | 4_2:-73151769 | Msa0621190:three_prime_UTR |
| ACTGGAGCTAATGCTATTGC+AGG | 0.451070 | 4_2:-73153007 | Msa0621190:CDS |
| CAGTTGACACCAGGAGCTGC+TGG | 0.455088 | 4_2:+73152239 | None:intergenic |
| GCCATTGCTGACTTCAATGC+TGG | 0.456055 | 4_2:-73152332 | Msa0621190:CDS |
| GTGATAACAATTTGGCAGCT+AGG | 0.461647 | 4_2:+73154100 | None:intergenic |
| CGGAGATTCGCTCCCGTCGC+CGG | 0.463684 | 4_2:-73154057 | Msa0621190:five_prime_UTR |
| TGTGGTGCTGCATCAGTCCA+TGG | 0.469309 | 4_2:+73152269 | None:intergenic |
| AATCTGTGACAGCAACTGGC+TGG | 0.470930 | 4_2:-73151846 | Msa0621190:CDS |
| GTGGGAATTTGTTGCGGTGG+TGG | 0.473747 | 4_2:+73151880 | None:intergenic |
| AACTTGCATTTGATTGGTAA+AGG | 0.474388 | 4_2:+73152967 | None:intergenic |
| TGCTGTCTACTGCCGGCGAC+GGG | 0.474415 | 4_2:+73154045 | None:intergenic |
| CAGATTGAACAATAATGTCC+TGG | 0.474422 | 4_2:+73153074 | None:intergenic |
| TGATAACAATTTGGCAGCTA+GGG | 0.476595 | 4_2:+73154101 | None:intergenic |
| CTTAAGTTTGCTCAGTACAC+TGG | 0.477075 | 4_2:-73153025 | Msa0621190:CDS |
| AACTGGGCTGCCCCAGAAGC+TGG | 0.477922 | 4_2:-73152221 | Msa0621190:intron |
| AGCAGCTCCTGGTGTCAACT+GGG | 0.479182 | 4_2:-73152237 | Msa0621190:CDS |
| TAAGAACTGCGACTTCCAAA+TGG | 0.482705 | 4_2:-73153926 | Msa0621190:CDS |
| CAGCCTATTCCAGCAGCTCC+TGG | 0.483642 | 4_2:-73152248 | Msa0621190:CDS |
| CCGCAACAAATTCCCACTCC+TGG | 0.483783 | 4_2:-73151874 | Msa0621190:CDS |
| CCAATGTCAACATATCTCAT+AGG | 0.485555 | 4_2:+73152677 | None:intergenic |
| AGAGTGCCGCATCCAAGTTT+CGG | 0.494133 | 4_2:-73154077 | Msa0621190:five_prime_UTR |
| GGGAGCGAATCTCCGAAACT+TGG | 0.496426 | 4_2:+73154065 | None:intergenic |
| AGTGTATTCTTTCAGTTGCA+GGG | 0.499899 | 4_2:-73151921 | Msa0621190:intron |
| AGAAACTTCAACTAGCTGCC+AGG | 0.503788 | 4_2:-73153120 | Msa0621190:CDS |
| ATGCTTTCCCTTGTTGTTAG+CGG | 0.513106 | 4_2:+73152649 | None:intergenic |
| CTTTCAGTTGCAGGGGACTG+GGG | 0.513229 | 4_2:-73151913 | Msa0621190:intron |
| CCTATGAGATATGTTGACAT+TGG | 0.514354 | 4_2:-73152677 | Msa0621190:CDS |
| TGATCCTAGAACTGACCATC+AGG | 0.519085 | 4_2:-73152912 | Msa0621190:intron |
| AATGCTGGTGGTCCATCTGA+TGG | 0.520603 | 4_2:-73152317 | Msa0621190:CDS |
| AGAACGGCTCTCTGTCCATA+AGG | 0.525873 | 4_2:+73153046 | None:intergenic |
| CGAAGAGGCCAAGGAGCAAG+AGG | 0.529876 | 4_2:-73152381 | Msa0621190:CDS |
| TGCTTCAAACGCCGCAACGA+TGG | 0.530057 | 4_2:-73153895 | Msa0621190:intron |
| ATCTGTGACAGCAACTGGCT+GGG | 0.531636 | 4_2:-73151845 | Msa0621190:CDS |
| GTGTCACAGAAAGCAATAGT+TGG | 0.533846 | 4_2:+73152707 | None:intergenic |
| ATCACATCCCACTTAAGACC+TGG | 0.536430 | 4_2:+73152563 | None:intergenic |
| GGGGCAGCCCAGTTGACACC+AGG | 0.539769 | 4_2:+73152230 | None:intergenic |
| TAGAGAACCCGAAGAGGCCA+AGG | 0.540338 | 4_2:-73152390 | Msa0621190:CDS |
| CTATTCGCCCAGGTCTTAAG+TGG | 0.540613 | 4_2:-73152571 | Msa0621190:CDS |
| TTCTTCTAGTATGTTATGGG+TGG | 0.542302 | 4_2:-73151719 | Msa0621190:three_prime_UTR |
| AGATTGAACAATAATGTCCT+GGG | 0.542615 | 4_2:+73153075 | None:intergenic |
| CCAGGAGTGGGAATTTGTTG+CGG | 0.543589 | 4_2:+73151874 | None:intergenic |
| CTGACGGGATGAAAGTTGTT+CGG | 0.545281 | 4_2:+73154008 | None:intergenic |
| CAGTAGACAGCATTCAATCA+TGG | 0.547924 | 4_2:-73154034 | Msa0621190:exon |
| GATTGAATGCTGTCTACTGC+CGG | 0.554663 | 4_2:+73154038 | None:intergenic |
| CGCAGTTCTTAGTGCCGAGG+TGG | 0.555885 | 4_2:+73153938 | None:intergenic |
| ATGCTGTCTACTGCCGGCGA+CGG | 0.556796 | 4_2:+73154044 | None:intergenic |
| AGGTCTTAAGTGGGATGTGA+TGG | 0.569141 | 4_2:-73152561 | Msa0621190:intron |
| TGGAATTCCCGCTAACAACA+AGG | 0.570440 | 4_2:-73152657 | Msa0621190:CDS |
| GTGTATTCTTTCAGTTGCAG+GGG | 0.570945 | 4_2:-73151920 | Msa0621190:intron |
| TGTTTGTTTGCAGCCCATCA+AGG | 0.579519 | 4_2:-73152750 | Msa0621190:intron |
| CACAGATTCAATTCCAGGAG+TGG | 0.579651 | 4_2:+73151861 | None:intergenic |
| GCAATGGCATAATCTAGAGC+AGG | 0.581740 | 4_2:+73152347 | None:intergenic |
| GTGGTCCATCTGATGGTCAG+TGG | 0.581948 | 4_2:-73152310 | Msa0621190:CDS |
| ATGCGTGGTACTATTCGCCC+AGG | 0.584833 | 4_2:-73152581 | Msa0621190:CDS |
| CTCGATTGCAACGATGACCC+TGG | 0.587596 | 4_2:+73153102 | None:intergenic |
| AAGGGACGTAAAATTAACTG+TGG | 0.588309 | 4_2:+73151789 | None:intergenic |
| ATGTTCTTTACCAGCTTCTG+GGG | 0.588593 | 4_2:+73152211 | None:intergenic |
| GAGAAGACGAGGCTCACTGA+AGG | 0.589438 | 4_2:+73152943 | None:intergenic |
| ACAGATTCAATTCCAGGAGT+GGG | 0.591012 | 4_2:+73151862 | None:intergenic |
| AACAAGGGAAAGCATAGCAT+CGG | 0.599533 | 4_2:-73152641 | Msa0621190:CDS |
| AGAGGCCAAGGAGCAAGAGG+AGG | 0.600295 | 4_2:-73152378 | Msa0621190:CDS |
| GAAACTTCAACTAGCTGCCA+GGG | 0.600433 | 4_2:-73153119 | Msa0621190:CDS |
| GGAGCTGCTGGAATAGGCTG+TGG | 0.601218 | 4_2:+73152251 | None:intergenic |
| ACATTATTGTTCAATCTGCA+AGG | 0.601975 | 4_2:-73153069 | Msa0621190:CDS |
| ATTGCTGACTTCAATGCTGG+TGG | 0.602149 | 4_2:-73152329 | Msa0621190:CDS |
| CTACTGCAATTGAGCAGCCA+TGG | 0.603201 | 4_2:-73152286 | Msa0621190:CDS |
| GGAGTGGGAATTTGTTGCGG+TGG | 0.607574 | 4_2:+73151877 | None:intergenic |
| TCACATCCCACTTAAGACCT+GGG | 0.607979 | 4_2:+73152564 | None:intergenic |
| CAACTTACTCCAGTTAACCA+TGG | 0.612131 | 4_2:-73151572 | Msa0621190:three_prime_UTR |
| CATGGCTGCTCAATTGCAGT+AGG | 0.613104 | 4_2:+73152287 | None:intergenic |
| TTTATTCTGAAATTAAACCA+TGG | 0.614267 | 4_2:+73151555 | None:intergenic |
| ACACGTATGCCAAACACAAG+TGG | 0.620101 | 4_2:+73151605 | None:intergenic |
| ATTGCAGGTAGACACACTCC+TGG | 0.622813 | 4_2:-73152992 | Msa0621190:CDS |
| GTAGGCCACTGACCATCAGA+TGG | 0.625414 | 4_2:+73152305 | None:intergenic |
| AGGGACGTAAAATTAACTGT+GGG | 0.629865 | 4_2:+73151790 | None:intergenic |
| ACCAGCATTGAAGTCAGCAA+TGG | 0.630888 | 4_2:+73152331 | None:intergenic |
| TTTGAACGTTACCATCGTTG+CGG | 0.631932 | 4_2:+73153884 | None:intergenic |
| AGTCGCAGTTCTTAGTGCCG+AGG | 0.635317 | 4_2:+73153935 | None:intergenic |
| GGAATTCCCGCTAACAACAA+GGG | 0.640044 | 4_2:-73152656 | Msa0621190:CDS |
| AGCTGACATCCAGATGATGT+TGG | 0.641030 | 4_2:-73153971 | Msa0621190:CDS |
| CGTATGCCAAACACAAGTGG+AGG | 0.648391 | 4_2:+73151608 | None:intergenic |
| GTACTGAGCAAACTTAAGAA+CGG | 0.651453 | 4_2:+73153030 | None:intergenic |
| GAATCTCCGAAACTTGGATG+CGG | 0.653436 | 4_2:+73154071 | None:intergenic |
| GATTGAACAATAATGTCCTG+GGG | 0.658645 | 4_2:+73153076 | None:intergenic |
| TATTCGCCCAGGTCTTAAGT+GGG | 0.666814 | 4_2:-73152570 | Msa0621190:CDS |
| TCAGTGAGGATGAGAAGACG+AGG | 0.674872 | 4_2:+73152932 | None:intergenic |
| GGACGTAAAATTAACTGTGG+GGG | 0.678254 | 4_2:+73151792 | None:intergenic |
| TTGGCTGCTGATGTCCACCT+CGG | 0.712261 | 4_2:-73153952 | Msa0621190:CDS |
| ATTGAACAATAATGTCCTGG+GGG | 0.723405 | 4_2:+73153077 | None:intergenic |
| GGGACGTAAAATTAACTGTG+GGG | 0.728943 | 4_2:+73151791 | None:intergenic |
| GGTCAGTTCTAGGATCAGTG+AGG | 0.760014 | 4_2:+73152918 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTTTTTGTTTTAATTT+AGG | - | chr4_2:73152433-73152452 | Msa0621190:intron | 10.0% |
| !! | AATAAAAAAAAATGAATACA+TGG | + | chr4_2:73153662-73153681 | None:intergenic | 10.0% |
| !!! | ATTTTAAAAGATGACAATAA+CGG | + | chr4_2:73153530-73153549 | None:intergenic | 15.0% |
| !!! | AGGATGATTAATTACAATTT+TGG | - | chr4_2:73151905-73151924 | Msa0621190:CDS | 20.0% |
| !!! | TTTTATAGGTTAAAGCTTAT+AGG | + | chr4_2:73152073-73152092 | None:intergenic | 20.0% |
| !! | AAAACTCATATTTAAGCTAA+TGG | + | chr4_2:73152219-73152238 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTGTTTGTTTTA+CGG | - | chr4_2:73152262-73152281 | Msa0621190:CDS | 20.0% |
| !! | TTGTAATGATGATATAATCA+AGG | + | chr4_2:73152346-73152365 | None:intergenic | 20.0% |
| !! | GGTATTTATATCATTAATCT+TGG | - | chr4_2:73152454-73152473 | Msa0621190:intron | 20.0% |
| !!! | TTGCTTGTTAATATCAATTA+TGG | - | chr4_2:73152742-73152761 | Msa0621190:intron | 20.0% |
| !!! | GCTATATTTTTTGTTGTTTT+AGG | - | chr4_2:73152764-73152783 | Msa0621190:intron | 20.0% |
| !! | TTAAGAAAAACATTAGACAA+TGG | + | chr4_2:73153176-73153195 | None:intergenic | 20.0% |
| !! | AAAACAAATTGAAGATCAAA+GGG | + | chr4_2:73153503-73153522 | None:intergenic | 20.0% |
| !! | TAAAACAAATTGAAGATCAA+AGG | + | chr4_2:73153504-73153523 | None:intergenic | 20.0% |
| !!! | ATTTTCTTCTAGTATGTTAT+GGG | - | chr4_2:73153886-73153905 | Msa0621190:intron | 20.0% |
| !!! | ACAATTTTACTTAAAATCTC+AGG | + | chr4_2:73153933-73153952 | None:intergenic | 20.0% |
| !!! | TTTATTCTGAAATTAAACCA+TGG | + | chr4_2:73154056-73154075 | None:intergenic | 20.0% |
| !!! | TCAGAATAAATTTTTAGTGT+AGG | - | chr4_2:73154066-73154085 | Msa0621190:five_prime_UTR | 20.0% |
| !!! | AAATTTTTAGTGTAGGAATA+TGG | - | chr4_2:73154073-73154092 | Msa0621190:five_prime_UTR | 20.0% |
| !!! | TATGGTTTTTTACATGTATA+CGG | - | chr4_2:73154091-73154110 | Msa0621190:five_prime_UTR | 20.0% |
| ! | ATTAAGAAACACAATACTAG+AGG | + | chr4_2:73151796-73151815 | None:intergenic | 25.0% |
| !! | TCGTTAACAATCTAGTTTAT+AGG | - | chr4_2:73151885-73151904 | Msa0621190:CDS | 25.0% |
| ! | AATGTTCAGTAGACTAAATA+TGG | - | chr4_2:73152399-73152418 | Msa0621190:CDS | 25.0% |
| ! | TCATTAATCTTGGAAAAACT+TGG | - | chr4_2:73152464-73152483 | Msa0621190:intron | 25.0% |
| ! | CATTAATCTTGGAAAAACTT+GGG | - | chr4_2:73152465-73152484 | Msa0621190:intron | 25.0% |
| ! | GGCTTATATATTTCCTTTAT+TGG | - | chr4_2:73152785-73152804 | Msa0621190:intron | 25.0% |
| !! | TCTAATGTTTTTCTTAATGC+AGG | - | chr4_2:73153179-73153198 | Msa0621190:intron | 25.0% |
| !! | AAAAATCTTGAGTTTAGGTT+AGG | + | chr4_2:73153448-73153467 | None:intergenic | 25.0% |
| !!! | AACCTAAACTCAAGATTTTT+TGG | - | chr4_2:73153448-73153467 | Msa0621190:intron | 25.0% |
| ! | ATTTCTCTTCGACTTTAATT+TGG | - | chr4_2:73153472-73153491 | Msa0621190:intron | 25.0% |
| !! | TTTCTCTTCGACTTTAATTT+GGG | - | chr4_2:73153473-73153492 | Msa0621190:intron | 25.0% |
| !!! | TAAAATTTGGGTCAGTTTTT+TGG | - | chr4_2:73153851-73153870 | Msa0621190:intron | 25.0% |
| !! | CATTTTCTTCTAGTATGTTA+TGG | - | chr4_2:73153885-73153904 | Msa0621190:intron | 25.0% |
| TGTTAAGAATCGAGATTAAG+TGG | - | chr4_2:73151844-73151863 | Msa0621190:CDS | 30.0% | |
| ! | AATTCTGCAAAACGGTTTTT+AGG | - | chr4_2:73151971-73151990 | Msa0621190:intron | 30.0% |
| !!! | CCAATGCTACACTTTTTTAT+AGG | + | chr4_2:73152087-73152106 | None:intergenic | 30.0% |
| ! | CCTATAAAAAAGTGTAGCAT+TGG | - | chr4_2:73152084-73152103 | Msa0621190:intron | 30.0% |
| ACACAAGGTGTAACTTAATT+GGG | + | chr4_2:73152316-73152335 | None:intergenic | 30.0% | |
| AACACAAGGTGTAACTTAAT+TGG | + | chr4_2:73152317-73152336 | None:intergenic | 30.0% | |
| ATTAAGTTACACCTTGTGTT+TGG | - | chr4_2:73152317-73152336 | Msa0621190:CDS | 30.0% | |
| TTAAGTTACACCTTGTGTTT+GGG | - | chr4_2:73152318-73152337 | Msa0621190:CDS | 30.0% | |
| AGATTGAACAATAATGTCCT+GGG | + | chr4_2:73152536-73152555 | None:intergenic | 30.0% | |
| ACATTATTGTTCAATCTGCA+AGG | - | chr4_2:73152539-73152558 | Msa0621190:intron | 30.0% | |
| AACTTGCATTTGATTGGTAA+AGG | + | chr4_2:73152644-73152663 | None:intergenic | 30.0% | |
| ATTAACAAGCAAACATGTCA+AGG | + | chr4_2:73152734-73152753 | None:intergenic | 30.0% | |
| GCACAAATATCAACCAATAA+AGG | + | chr4_2:73152801-73152820 | None:intergenic | 30.0% | |
| !! | TTGTGCATTTCGCTTTTATA+AGG | - | chr4_2:73152815-73152834 | Msa0621190:intron | 30.0% |
| TGCCAAAAAATCTTGAGTTT+AGG | + | chr4_2:73153453-73153472 | None:intergenic | 30.0% | |
| ! | ACTGACCCAAATTTTACTTT+CGG | + | chr4_2:73153847-73153866 | None:intergenic | 30.0% |
| GAAATTAAACCATGGTTAAC+TGG | + | chr4_2:73154048-73154067 | None:intergenic | 30.0% | |
| TGATAACAATTTGGCAGCTA+GGG | + | chr4_2:73151510-73151529 | None:intergenic | 35.0% | |
| TGAAGCAATAACGTTCCATT+TGG | + | chr4_2:73151700-73151719 | None:intergenic | 35.0% | |
| ! | TGTTCACTTTCATTTTGTGC+TGG | - | chr4_2:73151938-73151957 | Msa0621190:intron | 35.0% |
| ! | CTGTTTGGAATTCTGCAAAA+CGG | - | chr4_2:73151963-73151982 | Msa0621190:intron | 35.0% |
| CAAAACAAAACGCAACACTA+TGG | + | chr4_2:73152253-73152272 | None:intergenic | 35.0% | |
| ATTGAACAATAATGTCCTGG+GGG | + | chr4_2:73152534-73152553 | None:intergenic | 35.0% | |
| GATTGAACAATAATGTCCTG+GGG | + | chr4_2:73152535-73152554 | None:intergenic | 35.0% | |
| CAGATTGAACAATAATGTCC+TGG | + | chr4_2:73152537-73152556 | None:intergenic | 35.0% | |
| GTACTGAGCAAACTTAAGAA+CGG | + | chr4_2:73152581-73152600 | None:intergenic | 35.0% | |
| ATTTGATTGGTAAAGGTTCC+AGG | + | chr4_2:73152637-73152656 | None:intergenic | 35.0% | |
| GAAGGAAACTTGCATTTGAT+TGG | + | chr4_2:73152650-73152669 | None:intergenic | 35.0% | |
| AGCAAACATGTCAAGGATAA+TGG | + | chr4_2:73152727-73152746 | None:intergenic | 35.0% | |
| CCAATGTCAACATATCTCAT+AGG | + | chr4_2:73152934-73152953 | None:intergenic | 35.0% | |
| CCTATGAGATATGTTGACAT+TGG | - | chr4_2:73152931-73152950 | Msa0621190:CDS | 35.0% | |
| AATGTTCTTTACCAGCTTCT+GGG | + | chr4_2:73153401-73153420 | None:intergenic | 35.0% | |
| AAATGTTCTTTACCAGCTTC+TGG | + | chr4_2:73153402-73153421 | None:intergenic | 35.0% | |
| GAGTGTAGTAATGATGTCTT+GGG | + | chr4_2:73153566-73153585 | None:intergenic | 35.0% | |
| TGAGTGTAGTAATGATGTCT+TGG | + | chr4_2:73153567-73153586 | None:intergenic | 35.0% | |
| TAGTGTATTCTTTCAGTTGC+AGG | - | chr4_2:73153686-73153705 | Msa0621190:intron | 35.0% | |
| AGTGTATTCTTTCAGTTGCA+GGG | - | chr4_2:73153687-73153706 | Msa0621190:intron | 35.0% | |
| AGGGACGTAAAATTAACTGT+GGG | + | chr4_2:73153821-73153840 | None:intergenic | 35.0% | |
| AAGGGACGTAAAATTAACTG+TGG | + | chr4_2:73153822-73153841 | None:intergenic | 35.0% | |
| ! | CAAATTTTACTTTCGGGGAA+GGG | + | chr4_2:73153840-73153859 | None:intergenic | 35.0% |
| CTTCCCCGAAAGTAAAATTT+GGG | - | chr4_2:73153839-73153858 | Msa0621190:intron | 35.0% | |
| ! | TGACCCAAATTTTACTTTCG+GGG | + | chr4_2:73153845-73153864 | None:intergenic | 35.0% |
| ! | CTGACCCAAATTTTACTTTC+GGG | + | chr4_2:73153846-73153865 | None:intergenic | 35.0% |
| TTCTTCTAGTATGTTATGGG+TGG | - | chr4_2:73153889-73153908 | Msa0621190:intron | 35.0% | |
| ! | GGTGCTTTGATTTCTTGTAT+AGG | - | chr4_2:73154112-73154131 | Msa0621190:five_prime_UTR | 35.0% |
| GTGATAACAATTTGGCAGCT+AGG | + | chr4_2:73151511-73151530 | None:intergenic | 40.0% | |
| GGCACTCTGTGATAACAATT+TGG | + | chr4_2:73151519-73151538 | None:intergenic | 40.0% | |
| CAGTAGACAGCATTCAATCA+TGG | - | chr4_2:73151574-73151593 | Msa0621190:three_prime_UTR | 40.0% | |
| !! | TTCTTTTTGAGAGAGCTGAC+GGG | + | chr4_2:73151618-73151637 | None:intergenic | 40.0% |
| !! | CTTCTTTTTGAGAGAGCTGA+CGG | + | chr4_2:73151619-73151638 | None:intergenic | 40.0% |
| TAAGAACTGCGACTTCCAAA+TGG | - | chr4_2:73151682-73151701 | Msa0621190:three_prime_UTR | 40.0% | |
| TTTGAACGTTACCATCGTTG+CGG | + | chr4_2:73151727-73151746 | None:intergenic | 40.0% | |
| !! | AACGGTTTTTAGGCTCTGTT+TGG | - | chr4_2:73151981-73152000 | Msa0621190:intron | 40.0% |
| ! | TTTTAGGCTCTGTTTGGTAG+CGG | - | chr4_2:73151987-73152006 | Msa0621190:intron | 40.0% |
| AATCAAGGAACCCAAACACA+AGG | + | chr4_2:73152331-73152350 | None:intergenic | 40.0% | |
| ! | CTTAAGTTTGCTCAGTACAC+TGG | - | chr4_2:73152583-73152602 | Msa0621190:CDS | 40.0% |
| ! | AGGATAATGGTTTCACCTGA+TGG | + | chr4_2:73152714-73152733 | None:intergenic | 40.0% |
| GTGTCACAGAAAGCAATAGT+TGG | + | chr4_2:73152904-73152923 | None:intergenic | 40.0% | |
| !! | ATGCTTTCCCTTGTTGTTAG+CGG | + | chr4_2:73152962-73152981 | None:intergenic | 40.0% |
| ! | AACAAGGGAAAGCATAGCAT+CGG | - | chr4_2:73152967-73152986 | Msa0621190:CDS | 40.0% |
| !!! | ATAGCATCGGTTGTCTCTTT+TGG | - | chr4_2:73152980-73152999 | Msa0621190:CDS | 40.0% |
| ACACAGTGCTGTGTAAAGAA+GGG | + | chr4_2:73153153-73153172 | None:intergenic | 40.0% | |
| ! | CTTTTATAGAGAACCCGAAG+AGG | - | chr4_2:73153212-73153231 | Msa0621190:intron | 40.0% |
| ATGTTCTTTACCAGCTTCTG+GGG | + | chr4_2:73153400-73153419 | None:intergenic | 40.0% | |
| GTGTATTCTTTCAGTTGCAG+GGG | - | chr4_2:73153688-73153707 | Msa0621190:intron | 40.0% | |
| ACAGATTCAATTCCAGGAGT+GGG | + | chr4_2:73153749-73153768 | None:intergenic | 40.0% | |
| ATTGAATCTGTGACAGCAAC+TGG | - | chr4_2:73153758-73153777 | Msa0621190:intron | 40.0% | |
| GGACGTAAAATTAACTGTGG+GGG | + | chr4_2:73153819-73153838 | None:intergenic | 40.0% | |
| GGGACGTAAAATTAACTGTG+GGG | + | chr4_2:73153820-73153839 | None:intergenic | 40.0% | |
| ! | CCAAATTTTACTTTCGGGGA+AGG | + | chr4_2:73153841-73153860 | None:intergenic | 40.0% |
| CCTTCCCCGAAAGTAAAATT+TGG | - | chr4_2:73153838-73153857 | Msa0621190:intron | 40.0% | |
| CAACTTACTCCAGTTAACCA+TGG | - | chr4_2:73154036-73154055 | Msa0621190:exon | 40.0% | |
| ! | CAATTTGGCAGCTAGGGTTT+TGG | + | chr4_2:73151504-73151523 | None:intergenic | 45.0% |
| GAATCTCCGAAACTTGGATG+CGG | + | chr4_2:73151540-73151559 | None:intergenic | 45.0% | |
| GATTGAATGCTGTCTACTGC+CGG | + | chr4_2:73151573-73151592 | None:intergenic | 45.0% | |
| CTGACGGGATGAAAGTTGTT+CGG | + | chr4_2:73151603-73151622 | None:intergenic | 45.0% | |
| AGCTGACATCCAGATGATGT+TGG | - | chr4_2:73151637-73151656 | Msa0621190:three_prime_UTR | 45.0% | |
| !!! | CATTTTGTGCTGGCTCTGTT+TGG | - | chr4_2:73151948-73151967 | Msa0621190:intron | 45.0% |
| CGCAACACTATGGATCTGTT+TGG | + | chr4_2:73152243-73152262 | None:intergenic | 45.0% | |
| AGAAACTTCAACTAGCTGCC+AGG | - | chr4_2:73152488-73152507 | Msa0621190:intron | 45.0% | |
| GAAACTTCAACTAGCTGCCA+GGG | - | chr4_2:73152489-73152508 | Msa0621190:intron | 45.0% | |
| GTTCAATCTGCAAGGCCTTA+TGG | - | chr4_2:73152547-73152566 | Msa0621190:intron | 45.0% | |
| ACTGGAGCTAATGCTATTGC+AGG | - | chr4_2:73152601-73152620 | Msa0621190:CDS | 45.0% | |
| TGATCCTAGAACTGACCATC+AGG | - | chr4_2:73152696-73152715 | Msa0621190:CDS | 45.0% | |
| TTCACCTGATGGTCAGTTCT+AGG | + | chr4_2:73152703-73152722 | None:intergenic | 45.0% | |
| TGTTTGTTTGCAGCCCATCA+AGG | - | chr4_2:73152858-73152877 | Msa0621190:intron | 45.0% | |
| TGGAATTCCCGCTAACAACA+AGG | - | chr4_2:73152951-73152970 | Msa0621190:CDS | 45.0% | |
| GGAATTCCCGCTAACAACAA+GGG | - | chr4_2:73152952-73152971 | Msa0621190:CDS | 45.0% | |
| !! | TGCTTTCCCTTGTTGTTAGC+GGG | + | chr4_2:73152961-73152980 | None:intergenic | 45.0% |
| !!! | CGGTTGTCTCTTTTGGCTTT+TGG | - | chr4_2:73152987-73153006 | Msa0621190:CDS | 45.0% |
| !!! | GTCTCTTTTGGCTTTTGGCT+AGG | - | chr4_2:73152992-73153011 | Msa0621190:CDS | 45.0% |
| !!! | CTTTTGGCTTTTGGCTAGGA+TGG | - | chr4_2:73152996-73153015 | Msa0621190:CDS | 45.0% |
| TATTCGCCCAGGTCTTAAGT+GGG | - | chr4_2:73153038-73153057 | Msa0621190:CDS | 45.0% | |
| TCACATCCCACTTAAGACCT+GGG | + | chr4_2:73153047-73153066 | None:intergenic | 45.0% | |
| ATCACATCCCACTTAAGACC+TGG | + | chr4_2:73153048-73153067 | None:intergenic | 45.0% | |
| AGGTCTTAAGTGGGATGTGA+TGG | - | chr4_2:73153047-73153066 | Msa0621190:CDS | 45.0% | |
| GACACAGTGCTGTGTAAAGA+AGG | + | chr4_2:73153154-73153173 | None:intergenic | 45.0% | |
| ! | GCAATGGCATAATCTAGAGC+AGG | + | chr4_2:73153264-73153283 | None:intergenic | 45.0% |
| ! | ACCAGCATTGAAGTCAGCAA+TGG | + | chr4_2:73153280-73153299 | None:intergenic | 45.0% |
| !! | ATTGCTGACTTCAATGCTGG+TGG | - | chr4_2:73153279-73153298 | Msa0621190:intron | 45.0% |
| CACAGATTCAATTCCAGGAG+TGG | + | chr4_2:73153750-73153769 | None:intergenic | 45.0% | |
| GCTGTCACAGATTCAATTCC+AGG | + | chr4_2:73153755-73153774 | None:intergenic | 45.0% | |
| ATTTCGCCTCCACTTGTGTT+TGG | - | chr4_2:73153994-73154013 | Msa0621190:CDS | 45.0% | |
| ACACGTATGCCAAACACAAG+TGG | + | chr4_2:73154006-73154025 | None:intergenic | 45.0% | |
| !! | AGAGTGCCGCATCCAAGTTT+CGG | - | chr4_2:73151531-73151550 | Msa0621190:three_prime_UTR | 50.0% |
| CATCAGCAGCCAACATCATC+TGG | + | chr4_2:73151649-73151668 | None:intergenic | 50.0% | |
| AGAACGGCTCTCTGTCCATA+AGG | + | chr4_2:73152565-73152584 | None:intergenic | 50.0% | |
| ATTGCAGGTAGACACACTCC+TGG | - | chr4_2:73152616-73152635 | Msa0621190:CDS | 50.0% | |
| TCAGTGAGGATGAGAAGACG+AGG | + | chr4_2:73152679-73152698 | None:intergenic | 50.0% | |
| !! | GGTCAGTTCTAGGATCAGTG+AGG | + | chr4_2:73152693-73152712 | None:intergenic | 50.0% |
| CCAAGAGCAGCTTCCTTGAT+GGG | + | chr4_2:73152874-73152893 | None:intergenic | 50.0% | |
| TCCAAGAGCAGCTTCCTTGA+TGG | + | chr4_2:73152875-73152894 | None:intergenic | 50.0% | |
| !! | AGGATGGTTTTGCAGATGCG+TGG | - | chr4_2:73153012-73153031 | Msa0621190:CDS | 50.0% |
| CTATTCGCCCAGGTCTTAAG+TGG | - | chr4_2:73153037-73153056 | Msa0621190:CDS | 50.0% | |
| TTCATCCTCCTCTTGCTCCT+TGG | + | chr4_2:73153238-73153257 | None:intergenic | 50.0% | |
| !! | GCCATTGCTGACTTCAATGC+TGG | - | chr4_2:73153276-73153295 | Msa0621190:intron | 50.0% |
| AATGCTGGTGGTCCATCTGA+TGG | - | chr4_2:73153291-73153310 | Msa0621190:intron | 50.0% | |
| CATGGCTGCTCAATTGCAGT+AGG | + | chr4_2:73153324-73153343 | None:intergenic | 50.0% | |
| CTACTGCAATTGAGCAGCCA+TGG | - | chr4_2:73153322-73153341 | Msa0621190:intron | 50.0% | |
| TTCTTTCAGTTGCAGGGGAC+TGG | - | chr4_2:73153693-73153712 | Msa0621190:intron | 50.0% | |
| TCTTTCAGTTGCAGGGGACT+GGG | - | chr4_2:73153694-73153713 | Msa0621190:intron | 50.0% | |
| !! | CCAGGAGTGGGAATTTGTTG+CGG | + | chr4_2:73153737-73153756 | None:intergenic | 50.0% |
| AATCTGTGACAGCAACTGGC+TGG | - | chr4_2:73153762-73153781 | Msa0621190:intron | 50.0% | |
| ATCTGTGACAGCAACTGGCT+GGG | - | chr4_2:73153763-73153782 | Msa0621190:intron | 50.0% | |
| CGTATGCCAAACACAAGTGG+AGG | + | chr4_2:73154003-73154022 | None:intergenic | 50.0% | |
| GGGAGCGAATCTCCGAAACT+TGG | + | chr4_2:73151546-73151565 | None:intergenic | 55.0% | |
| TTGGCTGCTGATGTCCACCT+CGG | - | chr4_2:73151656-73151675 | Msa0621190:three_prime_UTR | 55.0% | |
| AGTCGCAGTTCTTAGTGCCG+AGG | + | chr4_2:73151676-73151695 | None:intergenic | 55.0% | |
| TGCTTCAAACGCCGCAACGA+TGG | - | chr4_2:73151713-73151732 | Msa0621190:three_prime_UTR | 55.0% | |
| CTCGATTGCAACGATGACCC+TGG | + | chr4_2:73152509-73152528 | None:intergenic | 55.0% | |
| GAGAAGACGAGGCTCACTGA+AGG | + | chr4_2:73152668-73152687 | None:intergenic | 55.0% | |
| CCCATCAAGGAAGCTGCTCT+TGG | - | chr4_2:73152871-73152890 | Msa0621190:intron | 55.0% | |
| ATGCGTGGTACTATTCGCCC+AGG | - | chr4_2:73153027-73153046 | Msa0621190:CDS | 55.0% | |
| TAGAGAACCCGAAGAGGCCA+AGG | - | chr4_2:73153218-73153237 | Msa0621190:intron | 55.0% | |
| TCTTGCTCCTTGGCCTCTTC+GGG | + | chr4_2:73153228-73153247 | None:intergenic | 55.0% | |
| CTCTTGCTCCTTGGCCTCTT+CGG | + | chr4_2:73153229-73153248 | None:intergenic | 55.0% | |
| GTGGTCCATCTGATGGTCAG+TGG | - | chr4_2:73153298-73153317 | Msa0621190:intron | 55.0% | |
| GTAGGCCACTGACCATCAGA+TGG | + | chr4_2:73153306-73153325 | None:intergenic | 55.0% | |
| !! | TGTGGTGCTGCATCAGTCCA+TGG | + | chr4_2:73153342-73153361 | None:intergenic | 55.0% |
| ACACCAGGAGCTGCTGGAAT+AGG | + | chr4_2:73153366-73153385 | None:intergenic | 55.0% | |
| ! | AGCAGCTCCTGGTGTCAACT+GGG | - | chr4_2:73153371-73153390 | Msa0621190:intron | 55.0% |
| CTTTCAGTTGCAGGGGACTG+GGG | - | chr4_2:73153695-73153714 | Msa0621190:intron | 55.0% | |
| !! | GTGGGAATTTGTTGCGGTGG+TGG | + | chr4_2:73153731-73153750 | None:intergenic | 55.0% |
| !! | GGAGTGGGAATTTGTTGCGG+TGG | + | chr4_2:73153734-73153753 | None:intergenic | 55.0% |
| CCGCAACAAATTCCCACTCC+TGG | - | chr4_2:73153734-73153753 | Msa0621190:intron | 55.0% | |
| ATGCTGTCTACTGCCGGCGA+CGG | + | chr4_2:73151567-73151586 | None:intergenic | 60.0% | |
| ! | CGCAGTTCTTAGTGCCGAGG+TGG | + | chr4_2:73151673-73151692 | None:intergenic | 60.0% |
| CGTTGCAATCGAGAACCCCC+AGG | - | chr4_2:73152516-73152535 | Msa0621190:intron | 60.0% | |
| CGAAGAGGCCAAGGAGCAAG+AGG | - | chr4_2:73153227-73153246 | Msa0621190:intron | 60.0% | |
| AGAGGCCAAGGAGCAAGAGG+AGG | - | chr4_2:73153230-73153249 | Msa0621190:intron | 60.0% | |
| GGAGCTGCTGGAATAGGCTG+TGG | + | chr4_2:73153360-73153379 | None:intergenic | 60.0% | |
| CAGCCTATTCCAGCAGCTCC+TGG | - | chr4_2:73153360-73153379 | Msa0621190:intron | 60.0% | |
| CAGTTGACACCAGGAGCTGC+TGG | + | chr4_2:73153372-73153391 | None:intergenic | 60.0% | |
| ! | CAGCAGCTCCTGGTGTCAAC+TGG | - | chr4_2:73153370-73153389 | Msa0621190:intron | 60.0% |
| TGCTGTCTACTGCCGGCGAC+GGG | + | chr4_2:73151566-73151585 | None:intergenic | 65.0% | |
| AACTGGGCTGCCCCAGAAGC+TGG | - | chr4_2:73153387-73153406 | Msa0621190:intron | 65.0% | |
| CGGAGATTCGCTCCCGTCGC+CGG | - | chr4_2:73151551-73151570 | Msa0621190:three_prime_UTR | 70.0% | |
| GGGGCAGCCCAGTTGACACC+AGG | + | chr4_2:73153381-73153400 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 73151495 | 73154135 | 73151495 | ID=Msa0621190;Name=Msa0621190 |
| chr4_2 | mRNA | 73151495 | 73154135 | 73151495 | ID=Msa0621190-mRNA-1;Parent=Msa0621190;Name=Msa0621190-mRNA-1;_AED=0.15;_eAED=0.15;_QI=98|1|1|1|1|1|5|345|299 |
| chr4_2 | exon | 73151495 | 73151928 | 73151495 | ID=Msa0621190-mRNA-1:exon:21948;Parent=Msa0621190-mRNA-1 |
| chr4_2 | exon | 73152222 | 73152429 | 73152222 | ID=Msa0621190-mRNA-1:exon:21947;Parent=Msa0621190-mRNA-1 |
| chr4_2 | exon | 73152562 | 73152759 | 73152562 | ID=Msa0621190-mRNA-1:exon:21946;Parent=Msa0621190-mRNA-1 |
| chr4_2 | exon | 73152913 | 73153175 | 73152913 | ID=Msa0621190-mRNA-1:exon:21945;Parent=Msa0621190-mRNA-1 |
| chr4_2 | exon | 73153896 | 73154135 | 73153896 | ID=Msa0621190-mRNA-1:exon:21944;Parent=Msa0621190-mRNA-1 |
| chr4_2 | five_prime_UTR | 73154038 | 73154135 | 73154038 | ID=Msa0621190-mRNA-1:five_prime_utr;Parent=Msa0621190-mRNA-1 |
| chr4_2 | CDS | 73153896 | 73154037 | 73153896 | ID=Msa0621190-mRNA-1:cds;Parent=Msa0621190-mRNA-1 |
| chr4_2 | CDS | 73152913 | 73153175 | 73152913 | ID=Msa0621190-mRNA-1:cds;Parent=Msa0621190-mRNA-1 |
| chr4_2 | CDS | 73152562 | 73152759 | 73152562 | ID=Msa0621190-mRNA-1:cds;Parent=Msa0621190-mRNA-1 |
| chr4_2 | CDS | 73152222 | 73152429 | 73152222 | ID=Msa0621190-mRNA-1:cds;Parent=Msa0621190-mRNA-1 |
| chr4_2 | CDS | 73151840 | 73151928 | 73151840 | ID=Msa0621190-mRNA-1:cds;Parent=Msa0621190-mRNA-1 |
| chr4_2 | three_prime_UTR | 73151495 | 73151839 | 73151495 | ID=Msa0621190-mRNA-1:three_prime_utr;Parent=Msa0621190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
