Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463510 | XP_013461988.1 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463510 | sp|A7SDW5|EIF3L_NEMVE | 44.208 | 518 | 248 | 10 | 20 | 523 | 35 | 525 | 3.44e-155 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463510 | G7ZWE0 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003030 | Msa1463510 | 0.822599 | 2.173013e-53 | -8.615850e-47 |
| Msa0016440 | Msa1463510 | 0.854865 | 9.256984e-62 | -8.615850e-47 |
| Msa0020870 | Msa1463510 | 0.842831 | 2.033362e-58 | -8.615850e-47 |
| Msa0026270 | Msa1463510 | 0.824905 | 6.264156e-54 | -8.615850e-47 |
| Msa0042510 | Msa1463510 | 0.878328 | 3.070405e-69 | -8.615850e-47 |
| Msa0079560 | Msa1463510 | 0.866391 | 2.951912e-65 | -8.615850e-47 |
| Msa0116600 | Msa1463510 | 0.850839 | 1.310012e-60 | -8.615850e-47 |
| Msa0116690 | Msa1463510 | 0.835663 | 1.472279e-56 | -8.615850e-47 |
| Msa1363930 | Msa1463510 | 0.898048 | 7.766752e-77 | -8.615850e-47 |
| Msa1366540 | Msa1463510 | 0.817239 | 3.655945e-52 | -8.615850e-47 |
| Msa1387750 | Msa1463510 | 0.884151 | 2.448605e-71 | -8.615850e-47 |
| Msa1390760 | Msa1463510 | 0.811292 | 7.531767e-51 | -8.615850e-47 |
| Msa1403520 | Msa1463510 | 0.843753 | 1.154196e-58 | -8.615850e-47 |
| Msa1407550 | Msa1463510 | 0.810535 | 1.098453e-50 | -8.615850e-47 |
| Msa1413570 | Msa1463510 | 0.856458 | 3.173015e-62 | -8.615850e-47 |
| Msa1423050 | Msa1463510 | 0.836616 | 8.431814e-57 | -8.615850e-47 |
| Msa1463510 | Msa1465890 | 0.882995 | 6.521317e-71 | -8.615850e-47 |
| Msa0610380 | Msa1463510 | 0.804103 | 2.536800e-49 | -8.615850e-47 |
| Msa0619230 | Msa1463510 | 0.810331 | 1.215712e-50 | -8.615850e-47 |
| Msa0621190 | Msa1463510 | 0.873529 | 1.370120e-67 | -8.615850e-47 |
| Msa0650910 | Msa1463510 | 0.803421 | 3.513634e-49 | -8.615850e-47 |
| Msa0656450 | Msa1463510 | 0.863924 | 1.757977e-64 | -8.615850e-47 |
| Msa0700370 | Msa1463510 | 0.873350 | 1.573737e-67 | -8.615850e-47 |
| Msa0709380 | Msa1463510 | 0.880630 | 4.684926e-70 | -8.615850e-47 |
| Msa0724530 | Msa1463510 | 0.829716 | 4.404626e-55 | -8.615850e-47 |
| Msa0812330 | Msa1463510 | 0.804764 | 1.846998e-49 | -8.615850e-47 |
| Msa0127230 | Msa1463510 | 0.866872 | 2.075480e-65 | -8.615850e-47 |
| Msa0146910 | Msa1463510 | 0.824354 | 8.448975e-54 | -8.615850e-47 |
| Msa0188740 | Msa1463510 | 0.821933 | 3.102247e-53 | -8.615850e-47 |
| Msa0192300 | Msa1463510 | 0.814204 | 1.735729e-51 | -8.615850e-47 |
| Msa0233550 | Msa1463510 | 0.826355 | 2.839302e-54 | -8.615850e-47 |
| Msa1235980 | Msa1463510 | 0.802119 | 6.525399e-49 | -8.615850e-47 |
| Msa1284800 | Msa1463510 | 0.831196 | 1.914178e-55 | -8.615850e-47 |
| Msa1317390 | Msa1463510 | 0.831242 | 1.865683e-55 | -8.615850e-47 |
| Msa0382670 | Msa1463510 | 0.822026 | 2.951799e-53 | -8.615850e-47 |
| Msa0383240 | Msa1463510 | 0.800015 | 1.757407e-48 | -8.615850e-47 |
| Msa0387290 | Msa1463510 | 0.951998 | 6.219210e-110 | -8.615850e-47 |
| Msa0388520 | Msa1463510 | 0.807508 | 4.883776e-50 | -8.615850e-47 |
| Msa0388540 | Msa1463510 | 0.821980 | 3.026100e-53 | -8.615850e-47 |
| Msa0426820 | Msa1463510 | 0.853321 | 2.581400e-61 | -8.615850e-47 |
| Msa0426940 | Msa1463510 | 0.810204 | 1.294990e-50 | -8.615850e-47 |
| Msa0467740 | Msa1463510 | 0.817666 | 2.929771e-52 | -8.615850e-47 |
| Msa0477670 | Msa1463510 | 0.983126 | 6.727560e-157 | -8.615850e-47 |
| Msa0987570 | Msa1463510 | 0.860676 | 1.749061e-63 | -8.615850e-47 |
| Msa0998890 | Msa1463510 | 0.820204 | 7.762072e-53 | -8.615850e-47 |
| Msa1037030 | Msa1463510 | 0.803518 | 3.354711e-49 | -8.615850e-47 |
| Msa1041830 | Msa1463510 | 0.873491 | 1.410844e-67 | -8.615850e-47 |
| Msa0270160 | Msa1463510 | 0.812078 | 5.081080e-51 | -8.615850e-47 |
| Msa0301250 | Msa1463510 | 0.819322 | 1.234243e-52 | -8.615850e-47 |
| Msa1124980 | Msa1463510 | 0.858748 | 6.656893e-63 | -8.615850e-47 |
| Msa1144630 | Msa1463510 | 0.898660 | 4.266259e-77 | -8.615850e-47 |
| Msa1165700 | Msa1463510 | 0.869600 | 2.742993e-66 | -8.615850e-47 |
| Msa1167360 | Msa1463510 | 0.847183 | 1.359032e-59 | -8.615850e-47 |
| Msa1185870 | Msa1463510 | 0.838735 | 2.409686e-57 | -8.615850e-47 |
| Msa0511760 | Msa1463510 | 0.833016 | 6.792637e-56 | -8.615850e-47 |
| Msa0514130 | Msa1463510 | 0.810430 | 1.157062e-50 | -8.615850e-47 |
| Msa0578010 | Msa1463510 | 0.827613 | 1.420189e-54 | -8.615850e-47 |
| Msa0880050 | Msa1463510 | 0.839140 | 1.893719e-57 | -8.615850e-47 |
| Msa0930360 | Msa1463510 | 0.886661 | 2.815229e-72 | -8.615850e-47 |
| Msa0930790 | Msa1463510 | 0.853572 | 2.187310e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463510 | MtrunA17_Chr3g0139831 | 96.578 | 526 | 3 | 1 | 1 | 526 | 1 | 511 | 0.0 | 1055 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1463510 | AT5G25757.1 | 80.306 | 523 | 86 | 3 | 5 | 526 | 8 | 514 | 0.0 | 869 |
| Msa1463510 | AT5G25754.1 | 80.306 | 523 | 86 | 3 | 5 | 526 | 8 | 514 | 0.0 | 869 |
Find 131 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTCAGGTTGTTCTTCA+TGG | 0.130061 | tig0043337:-7355 | Msa1463510:CDS |
| CTCTGAGCCTTCTATGTTAA+TGG | 0.150810 | tig0043337:-3874 | Msa1463510:CDS |
| TAATTACTGCAGTCTCTTTC+AGG | 0.189483 | tig0043337:-7368 | Msa1463510:CDS |
| GAATCAATGGCTTTGGGATA+TGG | 0.229252 | tig0043337:-7311 | Msa1463510:CDS |
| TTATTGCTGAACGCTGTTAA+TGG | 0.237099 | tig0043337:-2466 | Msa1463510:three_prime_UTR |
| AAGTAGATGAACCAACTTTA+AGG | 0.240848 | tig0043337:-3592 | Msa1463510:intron |
| TACTAGAGGCTCTTCAAAAC+TGG | 0.270914 | tig0043337:+4383 | Msa1463510:intergenic |
| GCCGGCAAAGCAAATTAAAA+AGG | 0.279775 | tig0043337:+2693 | Msa1463510:intergenic |
| TAGCAATGTCTTGAAAGTTT+TGG | 0.293530 | tig0043337:-6190 | Msa1463510:CDS |
| CGCAGTATCCAAACAGATTA+GGG | 0.294334 | tig0043337:+7754 | Msa1463510:intergenic |
| TTCATCAACAAGCCTGCTTT+GGG | 0.303001 | tig0043337:+4539 | Msa1463510:intergenic |
| GGTGTTTACACCATTGTTAT+TGG | 0.316510 | tig0043337:-6069 | Msa1463510:CDS |
| CGCTGAAGGGGTAATAAACT+TGG | 0.322037 | tig0043337:+4407 | Msa1463510:intergenic |
| CTGAGGGTTCATTGTCTCTT+GGG | 0.323751 | tig0043337:-6144 | Msa1463510:CDS |
| GCTGAGGGTTCATTGTCTCT+TGG | 0.330424 | tig0043337:-6145 | Msa1463510:CDS |
| ATTACCACCATTTACCACTA+TGG | 0.330766 | tig0043337:-6039 | Msa1463510:CDS |
| AGCTTCCGAATCAATGGCTT+TGG | 0.332438 | tig0043337:-7318 | Msa1463510:CDS |
| TTTCATCAACAAGCCTGCTT+TGG | 0.334356 | tig0043337:+4538 | Msa1463510:intergenic |
| GGAAAGAAGTTTCGTACATT+TGG | 0.342653 | tig0043337:+7560 | Msa1463510:intergenic |
| GGCAAAACCATAGTGGTAAA+TGG | 0.355256 | tig0043337:+6032 | Msa1463510:intergenic |
| CCGCAGTATCCAAACAGATT+AGG | 0.356064 | tig0043337:+7753 | Msa1463510:intergenic |
| GATGTACTTGGCACCCTTAT+CGG | 0.358467 | tig0043337:-2720 | Msa1463510:three_prime_UTR |
| CTTCTTGCGTCAGGTTGTTA+AGG | 0.370724 | tig0043337:-2948 | Msa1463510:intron |
| ACAGCGTTCAGCAATAAATA+AGG | 0.375191 | tig0043337:+2472 | Msa1463510:intergenic |
| AAGCAACAACAGTTGTTATC+AGG | 0.387793 | tig0043337:-3677 | Msa1463510:CDS |
| CCTATCTGACCGTTTCTTCA+AGG | 0.387841 | tig0043337:-7533 | Msa1463510:CDS |
| AATAAAGCCATTAACATAGA+AGG | 0.390415 | tig0043337:+3867 | Msa1463510:intergenic |
| AGAAACGGTCAGATAGGGTT+TGG | 0.394229 | tig0043337:+7539 | Msa1463510:intergenic |
| TGAACAAATGTATGCGTTGC+TGG | 0.399391 | tig0043337:-4583 | Msa1463510:CDS |
| TATGTTAATGGCTTTATTTG+AGG | 0.401710 | tig0043337:-3862 | Msa1463510:intron |
| GTTGTTGCTTTGCTTCATAA+AGG | 0.402516 | tig0043337:+3690 | Msa1463510:intergenic |
| CCTGACTGACTAATATCAAT+AGG | 0.413043 | tig0043337:+6090 | Msa1463510:intergenic |
| TTCAATATCTGTTCATATTG+TGG | 0.422018 | tig0043337:+4612 | Msa1463510:intergenic |
| ACTGGATCGGGAACGAAGTT+GGG | 0.422123 | tig0043337:+7643 | Msa1463510:intergenic |
| CTTGTACATCTTTAAGTACA+AGG | 0.428339 | tig0043337:-4652 | Msa1463510:CDS |
| TCTCAGTTGCGAGAGAAGTA+TGG | 0.431894 | tig0043337:-4507 | Msa1463510:CDS |
| CCTATTGATATTAGTCAGTC+AGG | 0.436140 | tig0043337:-6090 | Msa1463510:CDS |
| TTGGGGTATTTCAGTATGGT+TGG | 0.437805 | tig0043337:-6171 | Msa1463510:CDS |
| GACTGGATCGGGAACGAAGT+TGG | 0.438328 | tig0043337:+7642 | Msa1463510:intergenic |
| GAAGTAATCTCCATACCGTT+TGG | 0.439729 | tig0043337:+2967 | Msa1463510:intergenic |
| GCTTCCGAATCAATGGCTTT+GGG | 0.440244 | tig0043337:-7317 | Msa1463510:CDS |
| TGCAAAACTTGCAAGTTACA+TGG | 0.442232 | tig0043337:-3615 | Msa1463510:CDS |
| GTCTTGTTTGCAGCTTGAAA+AGG | 0.447914 | tig0043337:-2781 | Msa1463510:intron |
| TCTTCAAAACTGGGCGCTGA+AGG | 0.452512 | tig0043337:+4393 | Msa1463510:intergenic |
| CCTTGAAGAAACGGTCAGAT+AGG | 0.454544 | tig0043337:+7533 | Msa1463510:intergenic |
| TGGAGATTACTTCTTGCGTC+AGG | 0.454633 | tig0043337:-2957 | Msa1463510:CDS |
| ATGTAGATTAATGATACGGC+TGG | 0.471148 | tig0043337:-2408 | Msa1463510:three_prime_UTR |
| CCCTCATTTGAAAACATAAG+TGG | 0.471292 | tig0043337:+2566 | Msa1463510:intergenic |
| AAGAAGTTTCGTACATTTGG+TGG | 0.477971 | tig0043337:+7563 | Msa1463510:intergenic |
| CTCTGAATCTGCTGTGACAA+TGG | 0.481443 | tig0043337:-7710 | Msa1463510:exon |
| AATATACTTTCAAGAAGGTC+CGG | 0.484004 | tig0043337:+3651 | Msa1463510:intergenic |
| CAGTATGGTTGGTTTGCTGA+GGG | 0.489529 | tig0043337:-6160 | Msa1463510:CDS |
| TCTCTTGAAACAGTTCGATC+AGG | 0.490945 | tig0043337:-7209 | Msa1463510:intron |
| TGACCTGCGGAGCATAAGAT+TGG | 0.496399 | tig0043337:+6011 | Msa1463510:intergenic |
| TCAGTATGGTTGGTTTGCTG+AGG | 0.497191 | tig0043337:-6161 | Msa1463510:CDS |
| TGAGCATCACATACTGAGTA+AGG | 0.498577 | tig0043337:+2345 | Msa1463510:intergenic |
| AAGTCTTGCAACCTTAAAGT+TGG | 0.500427 | tig0043337:+3581 | Msa1463510:intergenic |
| ATATGCAGCTTCCGAATCAA+TGG | 0.505365 | tig0043337:-7324 | Msa1463510:CDS |
| TAGTATTTGGTATTACATGT+AGG | 0.513058 | tig0043337:+2625 | Msa1463510:intergenic |
| CTTCAAAACTGGGCGCTGAA+GGG | 0.514443 | tig0043337:+4394 | Msa1463510:intergenic |
| ACTCATGCTGTTGATAGTGC+TGG | 0.515009 | tig0043337:-3427 | Msa1463510:CDS |
| CGAGATGGACAGTATAAAGC+TGG | 0.519050 | tig0043337:-2751 | Msa1463510:CDS |
| CTCTTGGGTGATTATCACAC+TGG | 0.525249 | tig0043337:-6129 | Msa1463510:CDS |
| GAGAGAGTGAAGGTAGCTTA+CGG | 0.526072 | tig0043337:+7730 | Msa1463510:intergenic |
| GCTGAAGGGGTAATAAACTT+GGG | 0.527613 | tig0043337:+4408 | Msa1463510:intergenic |
| TCACACTGGTCTCAAGTGCT+TGG | 0.527814 | tig0043337:-6115 | Msa1463510:CDS |
| ATAGAAATCCACATCAGCAT+TGG | 0.528493 | tig0043337:+3393 | Msa1463510:intergenic |
| TTGCCAATCTTATGCTCCGC+AGG | 0.528690 | tig0043337:-6014 | Msa1463510:intron |
| ATATCCCAAAGCCATTGATT+CGG | 0.529948 | tig0043337:+7313 | Msa1463510:intergenic |
| CTTGAAGAAACGGTCAGATA+GGG | 0.530479 | tig0043337:+7534 | Msa1463510:intergenic |
| ATGGTGTGTCCTTGAAGAAA+CGG | 0.530687 | tig0043337:+7524 | Msa1463510:intergenic |
| CATCAACAAGCCTGCTTTGG+GGG | 0.533539 | tig0043337:+4541 | Msa1463510:intergenic |
| TAATCTCCATACCGTTTGGA+AGG | 0.533943 | tig0043337:+2971 | Msa1463510:intergenic |
| AGTAATATCCAATGCTGATG+TGG | 0.534293 | tig0043337:-3401 | Msa1463510:CDS |
| CTGGAGTGAGTTGATGTACT+TGG | 0.535340 | tig0043337:-2732 | Msa1463510:exon |
| AACAGTTGTTATCAGGTCTC+CGG | 0.535364 | tig0043337:-3670 | Msa1463510:CDS |
| TCTCTCTGATGTGACGGTAG+AGG | 0.537475 | tig0043337:+7602 | Msa1463510:intergenic |
| TACTCGAGCAGGAGAAGGAA+GGG | 0.539087 | tig0043337:-6257 | Msa1463510:CDS |
| CGAAGTTGGGATCGTAGCCT+AGG | 0.539968 | tig0043337:+7656 | Msa1463510:intergenic |
| AAATATGTAGATTAATGATA+CGG | 0.540047 | tig0043337:-2412 | Msa1463510:three_prime_UTR |
| GTATTGAGCGACAGCGTCTA+CGG | 0.542427 | tig0043337:+7495 | Msa1463510:intergenic |
| TGTTGAATATACTTTCAAGA+AGG | 0.551618 | tig0043337:+3646 | Msa1463510:intergenic |
| TCTAAACCTTCCAAACGGTA+TGG | 0.552675 | tig0043337:-2977 | Msa1463510:CDS |
| TCGATTCTCTGACGAAGCGT+AGG | 0.552849 | tig0043337:+7400 | Msa1463510:intergenic |
| TTCAAAACTGGGCGCTGAAG+GGG | 0.556525 | tig0043337:+4395 | Msa1463510:intergenic |
| CGTAGCCTAGGTCTTGAGCT+TGG | 0.560532 | tig0043337:+7668 | Msa1463510:intergenic |
| TTCGTCAGAGAATCGATTCG+TGG | 0.564246 | tig0043337:-7393 | Msa1463510:CDS |
| AAATGTGAACAAAATTCTGC+CGG | 0.568648 | tig0043337:+2675 | Msa1463510:intergenic |
| GTCTTCTCTACCGTGAGATG+TGG | 0.569636 | tig0043337:-7450 | Msa1463510:CDS |
| TCAGATACTCGAGCAGGAGA+AGG | 0.571169 | tig0043337:-6262 | Msa1463510:CDS |
| ACTAGAGGCTCTTCAAAACT+GGG | 0.572995 | tig0043337:+4384 | Msa1463510:intergenic |
| ATACTCGAGCAGGAGAAGGA+AGG | 0.578832 | tig0043337:-6258 | Msa1463510:CDS |
| CATTCTTCTCTCTGATGTGA+CGG | 0.584120 | tig0043337:+7596 | Msa1463510:intergenic |
| GCAGGACACAATTCATGTTG+TGG | 0.584900 | tig0043337:-3002 | Msa1463510:intron |
| ACAGCGTCTACGGAGGGCCA+TGG | 0.585469 | tig0043337:+7505 | Msa1463510:intergenic |
| CGTCTCCAAGCTCAAGACCT+AGG | 0.590090 | tig0043337:-7673 | Msa1463510:CDS |
| ACCTGGTTGTAATTTACTAG+AGG | 0.590170 | tig0043337:+4369 | Msa1463510:intergenic |
| TAAGATTGGCAAAACCATAG+TGG | 0.590299 | tig0043337:+6025 | Msa1463510:intergenic |
| AATTATTCAGATACTCGAGC+AGG | 0.592977 | tig0043337:-6268 | Msa1463510:CDS |
| AGAAGGCTCAGAGTCAATAG+AGG | 0.593706 | tig0043337:+3884 | Msa1463510:intergenic |
| TGAAAAGGTGATCAACGAGA+TGG | 0.601494 | tig0043337:-2766 | Msa1463510:CDS |
| ATTTGAAAACATAAGTGGGT+GGG | 0.604920 | tig0043337:+2571 | Msa1463510:intergenic |
| TGGAGTCTAAACCTTCCAAA+CGG | 0.607048 | tig0043337:-2982 | Msa1463510:CDS |
| CATTTGAAAACATAAGTGGG+TGG | 0.614613 | tig0043337:+2570 | Msa1463510:intergenic |
| TGTAGATTAATGATACGGCT+GGG | 0.616631 | tig0043337:-2407 | Msa1463510:three_prime_UTR |
| CATATTGTGGAGACTTCTGA+TGG | 0.618356 | tig0043337:+4625 | Msa1463510:intergenic |
| TAGGAGTGAGACGAGCATAG+AGG | 0.619056 | tig0043337:+7419 | Msa1463510:intergenic |
| CCTCATTTGAAAACATAAGT+GGG | 0.621953 | tig0043337:+2567 | Msa1463510:intergenic |
| TCGTCAGAGAATCGATTCGT+GGG | 0.622796 | tig0043337:-7392 | Msa1463510:CDS |
| GAGTGAGACGAGCATAGAGG+TGG | 0.627092 | tig0043337:+7422 | Msa1463510:intergenic |
| ACGGCTGGGCCTTTCAAAAG+CGG | 0.627850 | tig0043337:-2393 | Msa1463510:three_prime_UTR |
| GCCTCTAGTAAATTACAACC+AGG | 0.628196 | tig0043337:-4370 | Msa1463510:intron |
| GATGGCTATGATTACAATGG+TGG | 0.631082 | tig0043337:-6213 | Msa1463510:CDS |
| TGAGCGACAGCGTCTACGGA+GGG | 0.640297 | tig0043337:+7499 | Msa1463510:intergenic |
| GGTGGCGAAACCACATCTCA+CGG | 0.647100 | tig0043337:+7440 | Msa1463510:intergenic |
| GAGCAATTCACTGCAAACGA+TGG | 0.649501 | tig0043337:-6231 | Msa1463510:CDS |
| CCTAATCTGTTTGGATACTG+CGG | 0.649911 | tig0043337:-7753 | Msa1463510:five_prime_UTR |
| TCATCAACAAGCCTGCTTTG+GGG | 0.650115 | tig0043337:+4540 | Msa1463510:intergenic |
| AGTGGTAAATGGTGGTAATG+TGG | 0.651980 | tig0043337:+6043 | Msa1463510:intergenic |
| AATGCAACGATATGATGATG+AGG | 0.655375 | tig0043337:-4469 | Msa1463510:CDS |
| GCTGGGCCTTTCAAAAGCGG+AGG | 0.656562 | tig0043337:-2390 | Msa1463510:three_prime_UTR |
| AGCAGATTCAGAGAGAGTGA+AGG | 0.660117 | tig0043337:+7720 | Msa1463510:intergenic |
| CTGAAGGGGTAATAAACTTG+GGG | 0.662460 | tig0043337:+4409 | Msa1463510:intergenic |
| TTGAGCGACAGCGTCTACGG+AGG | 0.671373 | tig0043337:+7498 | Msa1463510:intergenic |
| GTTTCTTCAAGGACACACCA+TGG | 0.673800 | tig0043337:-7522 | Msa1463510:CDS |
| AAAACCATAGTGGTAAATGG+TGG | 0.678504 | tig0043337:+6035 | Msa1463510:intergenic |
| GGTAGAGAAGACAGAAGACA+TGG | 0.688600 | tig0043337:+7461 | Msa1463510:intergenic |
| ACGGTAGAGGTGAACAACGA+AGG | 0.689816 | tig0043337:+7615 | Msa1463510:intergenic |
| TACTGAGTAAGGATAGCTAG+CGG | 0.714399 | tig0043337:+2356 | Msa1463510:intergenic |
| AACGATGGCTATGATTACAA+TGG | 0.723830 | tig0043337:-6216 | Msa1463510:CDS |
| AATGTGGCATCCAATAACAA+TGG | 0.744265 | tig0043337:+6059 | Msa1463500:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATAAAAAAAATTATTGA+GGG | + | tig0043337:4727-4746 | Msa1463510:intergenic | 10.0% |
| !! | AGAAATAAAAAAAATTATTG+AGG | + | tig0043337:4728-4747 | Msa1463510:intergenic | 10.0% |
| !!! | TTGTTTCATATTTTATAATA+GGG | + | tig0043337:4888-4907 | Msa1463510:intergenic | 10.0% |
| !!! | CACATATTTTAATTTTATTT+TGG | + | tig0043337:4912-4931 | Msa1463510:intergenic | 10.0% |
| !!! | ACGAATTTATATTTTTTAAA+TGG | - | tig0043337:5050-5069 | Msa1463510:intron | 10.0% |
| !! | AGTATTTATTTATGTTAAAA+TGG | - | tig0043337:5100-5119 | Msa1463510:intron | 10.0% |
| !! | TTATAAATTATTACATTACA+TGG | - | tig0043337:5360-5379 | Msa1463510:intron | 10.0% |
| !! | AGTAATTTATATATTAAAAG+GGG | + | tig0043337:6336-6355 | Msa1463510:intergenic | 10.0% |
| !!! | TAAAATTTTTAAATAGTTTC+TGG | - | tig0043337:6807-6826 | Msa1463510:intron | 10.0% |
| !!! | AAAATTTTTAAATAGTTTCT+GGG | - | tig0043337:6808-6827 | Msa1463510:intron | 10.0% |
| !!! | TTTATTATCTATTTTATCAG+AGG | - | tig0043337:2980-2999 | Msa1463510:CDS | 15.0% |
| !! | ATTTAGTATTCATTAGAAAT+TGG | - | tig0043337:4453-4472 | Msa1463510:CDS | 15.0% |
| !!! | TTTGAAATATAATTCTACAA+TGG | + | tig0043337:4514-4533 | Msa1463510:intergenic | 15.0% |
| !!! | TAATATGTTTTGAATAAAAG+GGG | + | tig0043337:4617-4636 | Msa1463510:intergenic | 15.0% |
| !!! | CTAATATGTTTTGAATAAAA+GGG | + | tig0043337:4618-4637 | Msa1463510:intergenic | 15.0% |
| !!! | TCTAATATGTTTTGAATAAA+AGG | + | tig0043337:4619-4638 | Msa1463510:intergenic | 15.0% |
| !!! | ATTTTATTTTAACATAAGAG+GGG | + | tig0043337:4692-4711 | Msa1463510:intergenic | 15.0% |
| !!! | GATTTTATTTTAACATAAGA+GGG | + | tig0043337:4693-4712 | Msa1463510:intergenic | 15.0% |
| !!! | AGATTTTATTTTAACATAAG+AGG | + | tig0043337:4694-4713 | Msa1463510:intergenic | 15.0% |
| !!! | GTTGTTTCATATTTTATAAT+AGG | + | tig0043337:4889-4908 | Msa1463510:intergenic | 15.0% |
| !! | TTTAAATAACCATACTTAAT+CGG | + | tig0043337:4949-4968 | Msa1463510:intergenic | 15.0% |
| !!! | TAGTCCTTATTTAATTATTA+AGG | - | tig0043337:5132-5151 | Msa1463510:intron | 15.0% |
| !!! | AGTCCTTATTTAATTATTAA+GGG | - | tig0043337:5133-5152 | Msa1463510:intron | 15.0% |
| !!! | AGTATAAATTTTACTTTTCA+AGG | - | tig0043337:5192-5211 | Msa1463510:intron | 15.0% |
| !!! | GTATAAATTTTACTTTTCAA+GGG | - | tig0043337:5193-5212 | Msa1463510:intron | 15.0% |
| !! | TAATTTATATATTAAAAGGG+GGG | + | tig0043337:6334-6353 | Msa1463510:intergenic | 15.0% |
| !! | GTAATTTATATATTAAAAGG+GGG | + | tig0043337:6335-6354 | Msa1463510:intergenic | 15.0% |
| !! | AAAAAAAAAATATTGATCCA+AGG | + | tig0043337:6558-6577 | Msa1463510:intergenic | 15.0% |
| !! | AAATATGTAGATTAATGATA+CGG | - | tig0043337:7683-7702 | Msa1463510:CDS | 15.0% |
| !! | TATATGTTCAAAAACATTAT+TGG | + | tig0043337:7798-7817 | Msa1463510:intergenic | 15.0% |
| !!! | ATAAGCTATTTCTATAACAA+AGG | + | tig0043337:3501-3520 | Msa1463510:intergenic | 20.0% |
| !! | TATAGAAATAGCTTATACTT+AGG | - | tig0043337:3505-3524 | Msa1463510:intron | 20.0% |
| !!! | CTCAAATAAATTAGTTTAGT+TGG | + | tig0043337:4235-4254 | Msa1463510:intergenic | 20.0% |
| !! | CAACTAAACTAATTTATTTG+AGG | - | tig0043337:4233-4252 | Msa1463510:intron | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+GGG | + | tig0043337:4587-4606 | Msa1463510:intergenic | 20.0% |
| !!! | GTGTATATTTTAACATAAGA+GGG | + | tig0043337:4588-4607 | Msa1463510:intergenic | 20.0% |
| !!! | AGTGTATATTTTAACATAAG+AGG | + | tig0043337:4589-4608 | Msa1463510:intergenic | 20.0% |
| !! | CTTATTTAATTATTAAGGGA+GGG | - | tig0043337:5137-5156 | Msa1463510:intron | 20.0% |
| !! | TTATTTAATTATTAAGGGAG+GGG | - | tig0043337:5138-5157 | Msa1463510:intron | 20.0% |
| !! | AATAATTTATAACCCAAGAA+GGG | + | tig0043337:5352-5371 | Msa1463510:intergenic | 20.0% |
| !! | TAATAATTTATAACCCAAGA+AGG | + | tig0043337:5353-5372 | Msa1463510:intergenic | 20.0% |
| !!! | ACTTCAAATTTGAAATGTTT+GGG | + | tig0043337:5821-5840 | Msa1463510:intergenic | 20.0% |
| !!! | AACTTCAAATTTGAAATGTT+TGG | + | tig0043337:5822-5841 | Msa1463510:intergenic | 20.0% |
| !!! | AATTCAAATTTGAAGCTAAT+TGG | + | tig0043337:5849-5868 | Msa1463510:intergenic | 20.0% |
| !! | CTTGACAAATCTAAATAATA+TGG | + | tig0043337:7196-7215 | Msa1463510:intergenic | 20.0% |
| !!! | ATTCAATATTCCTTTTTTTG+TGG | - | tig0043337:7559-7578 | Msa1463510:CDS | 20.0% |
| !! | TTATCTATTTTATCAGAGGT+AGG | - | tig0043337:2984-3003 | Msa1463510:CDS | 25.0% |
| !! | TATCTATTTTATCAGAGGTA+GGG | - | tig0043337:2985-3004 | Msa1463510:CDS | 25.0% |
| !! | TGGATTGATTTATTTGAGTT+TGG | - | tig0043337:3014-3033 | Msa1463510:intron | 25.0% |
| !! | GGATTGATTTATTTGAGTTT+GGG | - | tig0043337:3015-3034 | Msa1463510:intron | 25.0% |
| !!! | TTTGGATTGACTTTTTTGTT+CGG | - | tig0043337:3042-3061 | Msa1463510:intron | 25.0% |
| !!! | ATTGTTTTTGCAAATGCTAT+AGG | + | tig0043337:3155-3174 | Msa1463510:intergenic | 25.0% |
| ! | TGTTTATGCTAGTATATAGA+GGG | + | tig0043337:3276-3295 | Msa1463510:intergenic | 25.0% |
| ! | AAATAAGGTAAAAACAGCTA+TGG | + | tig0043337:3591-3610 | Msa1463510:intergenic | 25.0% |
| !! | AACATAATTAAGACCCTTTT+TGG | + | tig0043337:3734-3753 | Msa1463510:intergenic | 25.0% |
| ! | TGTAATTTAAGCATCTTTGA+GGG | + | tig0043337:4557-4576 | Msa1463510:intergenic | 25.0% |
| !!! | TATTTTTCTTTGAAGTGTGT+AGG | + | tig0043337:4774-4793 | Msa1463510:intergenic | 25.0% |
| ! | TCAAAGAAAAATAGCATTGT+AGG | - | tig0043337:4781-4800 | Msa1463510:intron | 25.0% |
| ! | TTATTAAAGCCGATTAAGTA+TGG | - | tig0043337:4937-4956 | Msa1463510:intron | 25.0% |
| ! | CCTCCCTTAATAATTAAATA+AGG | + | tig0043337:5139-5158 | Msa1463510:intergenic | 25.0% |
| !! | CCTTATTTAATTATTAAGGG+AGG | - | tig0043337:5136-5155 | Msa1463510:intron | 25.0% |
| ! | TATTTAATTATTAAGGGAGG+GGG | - | tig0043337:5139-5158 | Msa1463510:intron | 25.0% |
| !!! | TAAATTTTACTTTTCAAGGG+AGG | - | tig0043337:5196-5215 | Msa1463510:intron | 25.0% |
| !!! | AAATTTTACTTTTCAAGGGA+GGG | - | tig0043337:5197-5216 | Msa1463510:intron | 25.0% |
| ! | AGTGTATATTTCAACATAAG+AGG | - | tig0043337:5221-5240 | Msa1463510:intron | 25.0% |
| ! | GTGTATATTTCAACATAAGA+GGG | - | tig0043337:5222-5241 | Msa1463510:intron | 25.0% |
| ! | TGTATATTTCAACATAAGAG+GGG | - | tig0043337:5223-5242 | Msa1463510:intron | 25.0% |
| ! | TTCAATATCTGTTCATATTG+TGG | + | tig0043337:5486-5505 | Msa1463510:intergenic | 25.0% |
| ! | AAACCAGATTTATTTCAATC+TGG | + | tig0043337:5939-5958 | Msa1463510:intergenic | 25.0% |
| ! | AGATTGAAATAAATCTGGTT+TGG | - | tig0043337:5938-5957 | Msa1463510:intron | 25.0% |
| !!! | CTTGTTACCTGATTTTTTAT+GGG | - | tig0043337:6115-6134 | Msa1463510:CDS | 25.0% |
| !!! | TTGTTACCTGATTTTTTATG+GGG | - | tig0043337:6116-6135 | Msa1463510:CDS | 25.0% |
| ! | AATAAAGCCATTAACATAGA+AGG | + | tig0043337:6231-6250 | Msa1463510:intergenic | 25.0% |
| !!! | TATGTTAATGGCTTTATTTG+AGG | - | tig0043337:6233-6252 | Msa1463510:CDS | 25.0% |
| ! | TGTTGAATATACTTTCAAGA+AGG | + | tig0043337:6452-6471 | Msa1463510:intergenic | 25.0% |
| ! | TAATTAATCTAGCATTTCCT+TGG | - | tig0043337:6538-6557 | Msa1463510:intron | 25.0% |
| ! | ATGATGATTTCATTTATTGC+AGG | - | tig0043337:7075-7094 | Msa1463510:intron | 25.0% |
| !!! | AGACAAAAACATTTGACTTT+TGG | - | tig0043337:7235-7254 | Msa1463510:CDS | 25.0% |
| !! | TTTTGTTCACATTTTGTTGA+AGG | - | tig0043337:7429-7448 | Msa1463510:CDS | 25.0% |
| !! | TTTGTTCACATTTTGTTGAA+GGG | - | tig0043337:7430-7449 | Msa1463510:CDS | 25.0% |
| ! | TAGTATTTGGTATTACATGT+AGG | + | tig0043337:7473-7492 | Msa1463510:intergenic | 25.0% |
| ! | GACAAGCAAAAAATAGTATT+TGG | + | tig0043337:7486-7505 | Msa1463510:intergenic | 25.0% |
| !!! | TTTGCTTGTCTTTTATTTAG+AGG | - | tig0043337:7496-7515 | Msa1463510:CDS | 25.0% |
| AACAAAAACCCTAATCTGTT+TGG | - | tig0043337:2333-2352 | Msa1463510:three_prime_UTR | 30.0% | |
| ! | TTTTTGTTCGGTAGAACTTT+TGG | - | tig0043337:3054-3073 | Msa1463510:intron | 30.0% |
| !! | GAACTTTTGGAAACAACTTA+TGG | - | tig0043337:3067-3086 | Msa1463510:intron | 30.0% |
| GTGTTTATGCTAGTATATAG+AGG | + | tig0043337:3277-3296 | Msa1463510:intergenic | 30.0% | |
| TCAAATAAGTCCATTCAAAC+AGG | + | tig0043337:3315-3334 | Msa1463510:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCCAT+TGG | - | tig0043337:3325-3344 | Msa1463510:intron | 30.0% | |
| TTGGAAAACTTGTGGAAATA+AGG | + | tig0043337:3606-3625 | Msa1463510:intergenic | 30.0% | |
| ! | TAATTAAGACCCTTTTTGGA+TGG | + | tig0043337:3730-3749 | Msa1463510:intergenic | 30.0% |
| ! | TAGCAATGTCTTGAAAGTTT+TGG | - | tig0043337:3905-3924 | Msa1463510:intron | 30.0% |
| ! | AGCAATGTCTTGAAAGTTTT+GGG | - | tig0043337:3906-3925 | Msa1463510:intron | 30.0% |
| ATTTCTATCTCTGTTCTTTC+TGG | - | tig0043337:4401-4420 | Msa1463510:CDS | 30.0% | |
| TTTCTATCTCTGTTCTTTCT+GGG | - | tig0043337:4402-4421 | Msa1463510:CDS | 30.0% | |
| AGTAGTTGAGTATCATTTGA+AGG | - | tig0043337:4478-4497 | Msa1463510:CDS | 30.0% | |
| GTAATTTAAGCATCTTTGAG+GGG | + | tig0043337:4556-4575 | Msa1463510:intergenic | 30.0% | |
| GTGTAATTTAAGCATCTTTG+AGG | + | tig0043337:4558-4577 | Msa1463510:intergenic | 30.0% | |
| !!! | TATTTTAACATAAGAGGGGA+GGG | + | tig0043337:4583-4602 | Msa1463510:intergenic | 30.0% |
| !!! | ATATTTTAACATAAGAGGGG+AGG | + | tig0043337:4584-4603 | Msa1463510:intergenic | 30.0% |
| !! | ATGTTTTGAATAAAAGGGGA+GGG | + | tig0043337:4613-4632 | Msa1463510:intergenic | 30.0% |
| !! | TATGTTTTGAATAAAAGGGG+AGG | + | tig0043337:4614-4633 | Msa1463510:intergenic | 30.0% |
| ! | AATTCAAGTTTCTCTCTCAA+GGG | + | tig0043337:4659-4678 | Msa1463510:intergenic | 30.0% |
| ! | TAATTCAAGTTTCTCTCTCA+AGG | + | tig0043337:4660-4679 | Msa1463510:intergenic | 30.0% |
| !!! | TATTTTAACATAAGAGGGGA+GGG | + | tig0043337:4583-4602 | Msa1463510:intergenic | 30.0% |
| !!! | TTATTTTAACATAAGAGGGG+AGG | + | tig0043337:4689-4708 | Msa1463510:intergenic | 30.0% |
| TTGCAATTCAAGCATCTTAT+AGG | - | tig0043337:5162-5181 | Msa1463510:intron | 30.0% | |
| TGCAATTCAAGCATCTTATA+GGG | - | tig0043337:5163-5182 | Msa1463510:intron | 30.0% | |
| !! | AATTTTACTTTTCAAGGGAG+GGG | - | tig0043337:5198-5217 | Msa1463510:intron | 30.0% |
| TGTAATTCAAGCATCTTTGA+GGG | - | tig0043337:5253-5272 | Msa1463510:intron | 30.0% | |
| CTTGTACATCTTTAAGTACA+AGG | - | tig0043337:5443-5462 | Msa1463510:intron | 30.0% | |
| ! | AGTCTAAGATAAGATATACC+TGG | + | tig0043337:5746-5765 | Msa1463510:intergenic | 30.0% |
| CTTCCAGATTGAAATAAATC+TGG | - | tig0043337:5933-5952 | Msa1463510:intron | 30.0% | |
| ! | TTCACTTTATGCAGCTTTTT+GGG | + | tig0043337:5981-6000 | Msa1463510:intergenic | 30.0% |
| ! | TTTCACTTTATGCAGCTTTT+TGG | + | tig0043337:5982-6001 | Msa1463510:intergenic | 30.0% |
| !!! | GCTTGTTACCTGATTTTTTA+TGG | - | tig0043337:6114-6133 | Msa1463510:CDS | 30.0% |
| !!! | TGTTACCTGATTTTTTATGG+GGG | - | tig0043337:6117-6136 | Msa1463510:CDS | 30.0% |
| ATATATTAAAAGGGGGGAAT+TGG | + | tig0043337:6328-6347 | Msa1463510:intergenic | 30.0% | |
| AATATACTTTCAAGAAGGTC+CGG | + | tig0043337:6447-6466 | Msa1463510:intergenic | 30.0% | |
| AAGTAGATGAACCAACTTTA+AGG | - | tig0043337:6503-6522 | Msa1463510:intron | 30.0% | |
| TCTTCAAAGAGAAAAGGATT+AGG | + | tig0043337:6763-6782 | Msa1463510:intergenic | 30.0% | |
| TGAATCTCTTCAAAGAGAAA+AGG | + | tig0043337:6769-6788 | Msa1463510:intergenic | 30.0% | |
| ACAAAATACCTGTGTTTATG+TGG | + | tig0043337:6834-6853 | Msa1463510:intergenic | 30.0% | |
| TATTAATTGTCCTAGCTTGA+AGG | - | tig0043337:6982-7001 | Msa1463510:intron | 30.0% | |
| TGTAACAAAATGCAAGCAAT+GGG | + | tig0043337:7263-7282 | Msa1463510:intergenic | 30.0% | |
| TTGTAACAAAATGCAAGCAA+TGG | + | tig0043337:7264-7283 | Msa1463510:intergenic | 30.0% | |
| AAATGTGAACAAAATTCTGC+CGG | + | tig0043337:7423-7442 | Msa1463510:intergenic | 30.0% | |
| ATTTGAAAACATAAGTGGGT+GGG | + | tig0043337:7527-7546 | Msa1463510:intergenic | 30.0% | |
| CCTCATTTGAAAACATAAGT+GGG | + | tig0043337:7531-7550 | Msa1463510:intergenic | 30.0% | |
| ! | CCACTTATGTTTTCAAATGA+GGG | - | tig0043337:7529-7548 | Msa1463510:CDS | 30.0% |
| TGGTATTTGTCCACAAAAAA+AGG | + | tig0043337:7572-7591 | Msa1463510:intergenic | 30.0% | |
| ACAACGCATAAAAAGAAACA+TGG | + | tig0043337:7592-7611 | Msa1463510:intergenic | 30.0% | |
| AAGAAGTTTCGTACATTTGG+TGG | + | tig0043337:2535-2554 | Msa1463510:intergenic | 35.0% | |
| GGAAAGAAGTTTCGTACATT+TGG | + | tig0043337:2538-2557 | Msa1463510:intergenic | 35.0% | |
| TAATTACTGCAGTCTCTTTC+AGG | - | tig0043337:2727-2746 | Msa1463510:exon | 35.0% | |
| ! | ATATCCCAAAGCCATTGATT+CGG | + | tig0043337:2785-2804 | Msa1463510:intergenic | 35.0% |
| ! | TATTTGAGTTTGGGTCTGTT+TGG | - | tig0043337:3024-3043 | Msa1463510:intron | 35.0% |
| ! | TAGTATATAGAGGGCTTGTT+TGG | + | tig0043337:3267-3286 | Msa1463510:intergenic | 35.0% |
| ATAAACACTTACGAGACTCT+GGG | - | tig0043337:3289-3308 | Msa1463510:intron | 35.0% | |
| ! | AAACTATCTTGGAGTGCTTA+TGG | + | tig0043337:3430-3449 | Msa1463510:intergenic | 35.0% |
| GCTGTTGTCATAAACTATCT+TGG | + | tig0043337:3441-3460 | Msa1463510:intergenic | 35.0% | |
| TTATACTTAGGCGCTTATCA+TGG | - | tig0043337:3517-3536 | Msa1463510:intron | 35.0% | |
| !! | GTTGTTTTCATGAGTCAAGT+TGG | + | tig0043337:3625-3644 | Msa1463510:intergenic | 35.0% |
| !! | ATGTTGTCTTTTGCTGTCTT+AGG | - | tig0043337:3749-3768 | Msa1463510:intron | 35.0% |
| ! | TCTTAGGCTTGGAATGTTTT+TGG | - | tig0043337:3765-3784 | Msa1463510:intron | 35.0% |
| AATTATTCAGATACTCGAGC+AGG | - | tig0043337:3827-3846 | Msa1463510:intron | 35.0% | |
| AACGATGGCTATGATTACAA+TGG | - | tig0043337:3879-3898 | Msa1463510:CDS | 35.0% | |
| ! | GCAATGTCTTGAAAGTTTTG+GGG | - | tig0043337:3907-3926 | Msa1463510:intron | 35.0% |
| !!! | AGTTTTGGGGTATTTCAGTA+TGG | - | tig0043337:3920-3939 | Msa1463510:intron | 35.0% |
| CCTGACTGACTAATATCAAT+AGG | + | tig0043337:4008-4027 | Msa1463510:intergenic | 35.0% | |
| CCTATTGATATTAGTCAGTC+AGG | - | tig0043337:4005-4024 | Msa1463510:intron | 35.0% | |
| GGTGTTTACACCATTGTTAT+TGG | - | tig0043337:4026-4045 | Msa1463510:intron | 35.0% | |
| AATGTGGCATCCAATAACAA+TGG | + | tig0043337:4039-4058 | Msa1463510:intergenic | 35.0% | |
| ATTACCACCATTTACCACTA+TGG | - | tig0043337:4056-4075 | Msa1463510:intron | 35.0% | |
| AAAACCATAGTGGTAAATGG+TGG | + | tig0043337:4063-4082 | Msa1463510:intergenic | 35.0% | |
| TAAGATTGGCAAAACCATAG+TGG | + | tig0043337:4073-4092 | Msa1463510:intergenic | 35.0% | |
| TTTGCCTTGTATCACTTGAA+TGG | - | tig0043337:4260-4279 | Msa1463510:intron | 35.0% | |
| ATACACTGACAGAATAGAGA+CGG | + | tig0043337:4286-4305 | Msa1463510:intergenic | 35.0% | |
| AGTGTATTGTTTATGTCCAC+AGG | - | tig0043337:4299-4318 | Msa1463510:intron | 35.0% | |
| TCCACAGGCTCAAATAATAT+TGG | - | tig0043337:4314-4333 | Msa1463510:intron | 35.0% | |
| ACCAATATTATTTGAGCCTG+TGG | + | tig0043337:4318-4337 | Msa1463510:intergenic | 35.0% | |
| ATCTTGCACATATCCACAAA+CGG | - | tig0043337:4372-4391 | Msa1463510:CDS | 35.0% | |
| TTCTATCTCTGTTCTTTCTG+GGG | - | tig0043337:4403-4422 | Msa1463510:CDS | 35.0% | |
| TTGAGTATCATTTGAAGGTG+TGG | - | tig0043337:4483-4502 | Msa1463510:CDS | 35.0% | |
| !! | ATTTTAACATAAGAGGGGAG+GGG | + | tig0043337:4582-4601 | Msa1463510:intergenic | 35.0% |
| !! | ATTTTAACATAAGAGGGGAG+GGG | + | tig0043337:4582-4601 | Msa1463510:intergenic | 35.0% |
| ATTCAAGCATCTTATAGGGA+AGG | - | tig0043337:5167-5186 | Msa1463510:intron | 35.0% | |
| TTCAAGCATCTTATAGGGAA+GGG | - | tig0043337:5168-5187 | Msa1463510:intron | 35.0% | |
| ATATTTCAACATAAGAGGGG+AGG | - | tig0043337:5226-5245 | Msa1463510:intron | 35.0% | |
| TATTTCAACATAAGAGGGGA+GGG | - | tig0043337:5227-5246 | Msa1463510:intron | 35.0% | |
| GTGTAATTCAAGCATCTTTG+AGG | - | tig0043337:5252-5271 | Msa1463510:intron | 35.0% | |
| GTAATTCAAGCATCTTTGAG+GGG | - | tig0043337:5254-5273 | Msa1463510:intron | 35.0% | |
| TTATGTGTACTTTCCCTTCT+TGG | - | tig0043337:5336-5355 | Msa1463510:intron | 35.0% | |
| TATGTGTACTTTCCCTTCTT+GGG | - | tig0043337:5337-5356 | Msa1463510:intron | 35.0% | |
| TGTAGAAAAGGCTACATTTC+AGG | + | tig0043337:5386-5405 | Msa1463510:intergenic | 35.0% | |
| ! | AATGCAACGATATGATGATG+AGG | - | tig0043337:5626-5645 | Msa1463510:intron | 35.0% |
| ACCTGGTTGTAATTTACTAG+AGG | + | tig0043337:5729-5748 | Msa1463510:intergenic | 35.0% | |
| ATAGAGAGAGAGAGAAAACA+AGG | + | tig0043337:5879-5898 | Msa1463510:intergenic | 35.0% | |
| ATGTACCCCCATAAAAAATC+AGG | + | tig0043337:6125-6144 | Msa1463510:intergenic | 35.0% | |
| CTTAAGTTATTTGTTTCCCC+AGG | - | tig0043337:6354-6373 | Msa1463510:intron | 35.0% | |
| !! | GTTGTTGCTTTGCTTCATAA+AGG | + | tig0043337:6408-6427 | Msa1463510:intergenic | 35.0% |
| AAGCAACAACAGTTGTTATC+AGG | - | tig0043337:6418-6437 | Msa1463510:intron | 35.0% | |
| !! | GTAACTTGCAAGTTTTGCAA+GGG | + | tig0043337:6479-6498 | Msa1463510:intergenic | 35.0% |
| !! | TGTAACTTGCAAGTTTTGCA+AGG | + | tig0043337:6480-6499 | Msa1463510:intergenic | 35.0% |
| TGCAAAACTTGCAAGTTACA+TGG | - | tig0043337:6480-6499 | Msa1463510:intron | 35.0% | |
| AAGTCTTGCAACCTTAAAGT+TGG | + | tig0043337:6517-6536 | Msa1463510:intergenic | 35.0% | |
| !! | TGCATTTCCATTTTGATGCT+TGG | - | tig0043337:6614-6633 | Msa1463510:intron | 35.0% |
| AGTAATATCCAATGCTGATG+TGG | - | tig0043337:6694-6713 | Msa1463510:intron | 35.0% | |
| ATAGAAATCCACATCAGCAT+TGG | + | tig0043337:6705-6724 | Msa1463510:intergenic | 35.0% | |
| AGTTTAAACCTGTGTCTTGA+TGG | - | tig0043337:6856-6875 | Msa1463510:intron | 35.0% | |
| CTAAATAATATGGACCGCAA+AGG | + | tig0043337:7186-7205 | Msa1463510:intergenic | 35.0% | |
| TTAAAAAGGGGAACCGATAA+GGG | + | tig0043337:7391-7410 | Msa1463510:intergenic | 35.0% | |
| ATTAAAAAGGGGAACCGATA+AGG | + | tig0043337:7392-7411 | Msa1463510:intergenic | 35.0% | |
| CGGCAAAGCAAATTAAAAAG+GGG | + | tig0043337:7403-7422 | Msa1463510:intergenic | 35.0% | |
| CCGGCAAAGCAAATTAAAAA+GGG | + | tig0043337:7404-7423 | Msa1463510:intergenic | 35.0% | |
| !!! | CCCTTTTTAATTTGCTTTGC+CGG | - | tig0043337:7401-7420 | Msa1463510:CDS | 35.0% |
| ! | TTCACATTTTGTTGAAGGGA+AGG | - | tig0043337:7434-7453 | Msa1463510:CDS | 35.0% |
| CATTTGAAAACATAAGTGGG+TGG | + | tig0043337:7528-7547 | Msa1463510:intergenic | 35.0% | |
| ! | CCCACTTATGTTTTCAAATG+AGG | - | tig0043337:7528-7547 | Msa1463510:CDS | 35.0% |
| CCCTCATTTGAAAACATAAG+TGG | + | tig0043337:7532-7551 | Msa1463510:intergenic | 35.0% | |
| ACAGCGTTCAGCAATAAATA+AGG | + | tig0043337:7626-7645 | Msa1463510:intergenic | 35.0% | |
| TTATTGCTGAACGCTGTTAA+TGG | - | tig0043337:7629-7648 | Msa1463510:CDS | 35.0% | |
| ATGTAGATTAATGATACGGC+TGG | - | tig0043337:7687-7706 | Msa1463510:CDS | 35.0% | |
| TGTAGATTAATGATACGGCT+GGG | - | tig0043337:7688-7707 | Msa1463510:CDS | 35.0% | |
| CGCAGTATCCAAACAGATTA+GGG | + | tig0043337:2344-2363 | Msa1463510:intergenic | 40.0% | |
| CCTAATCTGTTTGGATACTG+CGG | - | tig0043337:2342-2361 | Msa1463510:three_prime_UTR | 40.0% | |
| !!! | AACGAAGGTTTTGACTGGAT+CGG | + | tig0043337:2468-2487 | Msa1463510:intergenic | 40.0% |
| !! | TGAACAACGAAGGTTTTGAC+TGG | + | tig0043337:2473-2492 | Msa1463510:intergenic | 40.0% |
| CATTCTTCTCTCTGATGTGA+CGG | + | tig0043337:2502-2521 | Msa1463510:intergenic | 40.0% | |
| CTTGAAGAAACGGTCAGATA+GGG | + | tig0043337:2564-2583 | Msa1463510:intergenic | 40.0% | |
| ATGGTGTGTCCTTGAAGAAA+CGG | + | tig0043337:2574-2593 | Msa1463510:intergenic | 40.0% | |
| !! | CTCTTTCAGGTTGTTCTTCA+TGG | - | tig0043337:2740-2759 | Msa1463510:exon | 40.0% |
| ATATGCAGCTTCCGAATCAA+TGG | - | tig0043337:2771-2790 | Msa1463510:CDS | 40.0% | |
| !! | GAATCAATGGCTTTGGGATA+TGG | - | tig0043337:2784-2803 | Msa1463510:intron | 40.0% |
| TCTCTTGAAACAGTTCGATC+AGG | - | tig0043337:2886-2905 | Msa1463510:intron | 40.0% | |
| ! | TATCAGAGGTAGGGTTTGTT+TGG | - | tig0043337:2994-3013 | Msa1463510:CDS | 40.0% |
| CATAAACACTTACGAGACTC+TGG | - | tig0043337:3288-3307 | Msa1463510:intron | 40.0% | |
| GTCACAAGTGTTTATGCCAA+TGG | + | tig0043337:3344-3363 | Msa1463510:intergenic | 40.0% | |
| TTGAGAGAACACATGAAGAC+AGG | - | tig0043337:3369-3388 | Msa1463510:intron | 40.0% | |
| CAGCTATGGAACACATCATA+AGG | + | tig0043337:3577-3596 | Msa1463510:intergenic | 40.0% | |
| !! | GAGTCAAGTTGGAAAACTTG+TGG | + | tig0043337:3614-3633 | Msa1463510:intergenic | 40.0% |
| ATGAAGCTGTCCATCCAAAA+AGG | - | tig0043337:3717-3736 | Msa1463510:CDS | 40.0% | |
| TGAAGCTGTCCATCCAAAAA+GGG | - | tig0043337:3718-3737 | Msa1463510:CDS | 40.0% | |
| GATGGCTATGATTACAATGG+TGG | - | tig0043337:3882-3901 | Msa1463510:CDS | 40.0% | |
| ! | TTGGGGTATTTCAGTATGGT+TGG | - | tig0043337:3924-3943 | Msa1463510:intron | 40.0% |
| ! | AGTGGTAAATGGTGGTAATG+TGG | + | tig0043337:4055-4074 | Msa1463510:intergenic | 40.0% |
| GGCAAAACCATAGTGGTAAA+TGG | + | tig0043337:4066-4085 | Msa1463510:intergenic | 40.0% | |
| GCAAGCAAGCAATTGATTAG+TGG | + | tig0043337:4116-4135 | Msa1463510:intergenic | 40.0% | |
| CACATATCCACAAACGGAAT+GGG | - | tig0043337:4378-4397 | Msa1463510:CDS | 40.0% | |
| TAGAAATCCCATTCCGTTTG+TGG | + | tig0043337:4388-4407 | Msa1463510:intergenic | 40.0% | |
| !!! | CTGTTCTTTCTGGGGTTTTT+AGG | - | tig0043337:4411-4430 | Msa1463510:CDS | 40.0% |
| ! | TTTAAGCATCTTTGAGGGGA+GGG | + | tig0043337:4552-4571 | Msa1463510:intergenic | 40.0% |
| ! | ATTTAAGCATCTTTGAGGGG+AGG | + | tig0043337:4553-4572 | Msa1463510:intergenic | 40.0% |
| TCAAGCATCTTATAGGGAAG+GGG | - | tig0043337:5169-5188 | Msa1463510:intron | 40.0% | |
| ATTTCAACATAAGAGGGGAG+GGG | - | tig0043337:5228-5247 | Msa1463510:intron | 40.0% | |
| ! | TAGCCTTTTCTACAGATACG+TGG | - | tig0043337:5392-5411 | Msa1463510:intron | 40.0% |
| CATCCACGTATCTGTAGAAA+AGG | + | tig0043337:5398-5417 | Msa1463510:intergenic | 40.0% | |
| CATATTGTGGAGACTTCTGA+TGG | + | tig0043337:5473-5492 | Msa1463510:intergenic | 40.0% | |
| TGAACAAATGTATGCGTTGC+TGG | - | tig0043337:5512-5531 | Msa1463510:intron | 40.0% | |
| TTCATCAACAAGCCTGCTTT+GGG | + | tig0043337:5559-5578 | Msa1463510:intergenic | 40.0% | |
| TTTCATCAACAAGCCTGCTT+TGG | + | tig0043337:5560-5579 | Msa1463510:intergenic | 40.0% | |
| CTGAAGGGGTAATAAACTTG+GGG | + | tig0043337:5689-5708 | Msa1463510:intergenic | 40.0% | |
| GCTGAAGGGGTAATAAACTT+GGG | + | tig0043337:5690-5709 | Msa1463510:intergenic | 40.0% | |
| ACTAGAGGCTCTTCAAAACT+GGG | + | tig0043337:5714-5733 | Msa1463510:intergenic | 40.0% | |
| TACTAGAGGCTCTTCAAAAC+TGG | + | tig0043337:5715-5734 | Msa1463510:intergenic | 40.0% | |
| GCCTCTAGTAAATTACAACC+AGG | - | tig0043337:5725-5744 | Msa1463510:intron | 40.0% | |
| TTAGACTCCATCTGTGATCT+TGG | - | tig0043337:5759-5778 | Msa1463510:intron | 40.0% | |
| CACTCACTCAAAATGCTCTA+TGG | + | tig0043337:5792-5811 | Msa1463510:intergenic | 40.0% | |
| !! | TTATGCAGCTTTTTGGGAGA+TGG | + | tig0043337:5975-5994 | Msa1463510:intergenic | 40.0% |
| CTCTGAGCCTTCTATGTTAA+TGG | - | tig0043337:6221-6240 | Msa1463510:CDS | 40.0% | |
| TCTAAACAACGACAGCTGAT+GGG | + | tig0043337:6287-6306 | Msa1463510:intergenic | 40.0% | |
| ATCTAAACAACGACAGCTGA+TGG | + | tig0043337:6288-6307 | Msa1463510:intergenic | 40.0% | |
| TTAAAAGGGGGGAATTGGAA+AGG | + | tig0043337:6323-6342 | Msa1463510:intergenic | 40.0% | |
| TTGAAGTCTATACGCATCCT+GGG | + | tig0043337:6374-6393 | Msa1463510:intergenic | 40.0% | |
| ATTGAAGTCTATACGCATCC+TGG | + | tig0043337:6375-6394 | Msa1463510:intergenic | 40.0% | |
| AACAGTTGTTATCAGGTCTC+CGG | - | tig0043337:6425-6444 | Msa1463510:intron | 40.0% | |
| !! | TTTCCATTTTGATGCTTGGC+AGG | - | tig0043337:6618-6637 | Msa1463510:intron | 40.0% |
| AGAGAAAAGGATTAGGCAAG+AGG | + | tig0043337:6756-6775 | Msa1463510:intergenic | 40.0% | |
| TACTGTTACCATCAAGACAC+AGG | + | tig0043337:6867-6886 | Msa1463510:intergenic | 40.0% | |
| ACCAAGAAGCGAGTTAACAA+CGG | + | tig0043337:6952-6971 | Msa1463510:intergenic | 40.0% | |
| TGGAGTCTAAACCTTCCAAA+CGG | - | tig0043337:7113-7132 | Msa1463510:intron | 40.0% | |
| TCTAAACCTTCCAAACGGTA+TGG | - | tig0043337:7118-7137 | Msa1463510:intron | 40.0% | |
| TAATCTCCATACCGTTTGGA+AGG | + | tig0043337:7127-7146 | Msa1463510:intergenic | 40.0% | |
| GAAGTAATCTCCATACCGTT+TGG | + | tig0043337:7131-7150 | Msa1463510:intergenic | 40.0% | |
| !! | GTCTTGTTTGCAGCTTGAAA+AGG | - | tig0043337:7314-7333 | Msa1463510:CDS | 40.0% |
| TGAAAAGGTGATCAACGAGA+TGG | - | tig0043337:7329-7348 | Msa1463510:CDS | 40.0% | |
| GCCGGCAAAGCAAATTAAAA+AGG | + | tig0043337:7405-7424 | Msa1463510:intergenic | 40.0% | |
| TACTGAGTAAGGATAGCTAG+CGG | + | tig0043337:7742-7761 | Msa1463510:intergenic | 40.0% | |
| TGAGCATCACATACTGAGTA+AGG | + | tig0043337:7753-7772 | Msa1463510:intergenic | 40.0% | |
| CCGCAGTATCCAAACAGATT+AGG | + | tig0043337:2345-2364 | Msa1463510:intergenic | 45.0% | |
| GAGAGAGTGAAGGTAGCTTA+CGG | + | tig0043337:2368-2387 | Msa1463510:intergenic | 45.0% | |
| AGCAGATTCAGAGAGAGTGA+AGG | + | tig0043337:2378-2397 | Msa1463510:intergenic | 45.0% | |
| CTCTGAATCTGCTGTGACAA+TGG | - | tig0043337:2385-2404 | Msa1463510:three_prime_UTR | 45.0% | |
| !!! | ACGAAGGTTTTGACTGGATC+GGG | + | tig0043337:2467-2486 | Msa1463510:intergenic | 45.0% |
| AGAAACGGTCAGATAGGGTT+TGG | + | tig0043337:2559-2578 | Msa1463510:intergenic | 45.0% | |
| CCTTGAAGAAACGGTCAGAT+AGG | + | tig0043337:2565-2584 | Msa1463510:intergenic | 45.0% | |
| CCTATCTGACCGTTTCTTCA+AGG | - | tig0043337:2562-2581 | Msa1463510:three_prime_UTR | 45.0% | |
| GTTTCTTCAAGGACACACCA+TGG | - | tig0043337:2573-2592 | Msa1463510:three_prime_UTR | 45.0% | |
| GGTAGAGAAGACAGAAGACA+TGG | + | tig0043337:2637-2656 | Msa1463510:intergenic | 45.0% | |
| !! | TTCGTCAGAGAATCGATTCG+TGG | - | tig0043337:2702-2721 | Msa1463510:three_prime_UTR | 45.0% |
| !! | TCGTCAGAGAATCGATTCGT+GGG | - | tig0043337:2703-2722 | Msa1463510:three_prime_UTR | 45.0% |
| AGCTTCCGAATCAATGGCTT+TGG | - | tig0043337:2777-2796 | Msa1463510:intron | 45.0% | |
| GCTTCCGAATCAATGGCTTT+GGG | - | tig0043337:2778-2797 | Msa1463510:intron | 45.0% | |
| !! | GTCTTTTGCTGTCTTAGGCT+TGG | - | tig0043337:3754-3773 | Msa1463510:intron | 45.0% |
| GAGCAATTCACTGCAAACGA+TGG | - | tig0043337:3864-3883 | Msa1463510:CDS | 45.0% | |
| !! | TCAGTATGGTTGGTTTGCTG+AGG | - | tig0043337:3934-3953 | Msa1463510:intron | 45.0% |
| !! | CAGTATGGTTGGTTTGCTGA+GGG | - | tig0043337:3935-3954 | Msa1463510:intron | 45.0% |
| CTGAGGGTTCATTGTCTCTT+GGG | - | tig0043337:3951-3970 | Msa1463510:intron | 45.0% | |
| CTCTTGGGTGATTATCACAC+TGG | - | tig0043337:3966-3985 | Msa1463510:intron | 45.0% | |
| ACGGCCATTCAAGTGATACA+AGG | + | tig0043337:4267-4286 | Msa1463510:intergenic | 45.0% | |
| GCACATATCCACAAACGGAA+TGG | - | tig0043337:4377-4396 | Msa1463510:CDS | 45.0% | |
| ! | TTAAGCATCTTTGAGGGGAG+GGG | + | tig0043337:4551-4570 | Msa1463510:intergenic | 45.0% |
| AAGTTTCTCTCTCAAGGGAG+GGG | + | tig0043337:4654-4673 | Msa1463510:intergenic | 45.0% | |
| CAAGTTTCTCTCTCAAGGGA+GGG | + | tig0043337:4655-4674 | Msa1463510:intergenic | 45.0% | |
| TCAAGTTTCTCTCTCAAGGG+AGG | + | tig0043337:4656-4675 | Msa1463510:intergenic | 45.0% | |
| ! | ATTCAAGCATCTTTGAGGGG+AGG | - | tig0043337:5257-5276 | Msa1463510:intron | 45.0% |
| ! | TTCAAGCATCTTTGAGGGGA+GGG | - | tig0043337:5258-5277 | Msa1463510:intron | 45.0% |
| TCATCAACAAGCCTGCTTTG+GGG | + | tig0043337:5558-5577 | Msa1463510:intergenic | 45.0% | |
| TCTCAGTTGCGAGAGAAGTA+TGG | - | tig0043337:5588-5607 | Msa1463510:intron | 45.0% | |
| CGCTGAAGGGGTAATAAACT+TGG | + | tig0043337:5691-5710 | Msa1463510:intergenic | 45.0% | |
| TCCATCTGTGATCTTGGTTC+TGG | - | tig0043337:5765-5784 | Msa1463510:intron | 45.0% | |
| TCCAGAACCAAGATCACAGA+TGG | + | tig0043337:5769-5788 | Msa1463510:intergenic | 45.0% | |
| AGAAGGCTCAGAGTCAATAG+AGG | + | tig0043337:6214-6233 | Msa1463510:intergenic | 45.0% | |
| TGAAGTCTATACGCATCCTG+GGG | + | tig0043337:6373-6392 | Msa1463510:intergenic | 45.0% | |
| AGTCCTGCCAAGCATCAAAA+TGG | + | tig0043337:6624-6643 | Msa1463510:intergenic | 45.0% | |
| !! | ACTCATGCTGTTGATAGTGC+TGG | - | tig0043337:6668-6687 | Msa1463510:intron | 45.0% |
| TTTCTGGGCCACATAAACAC+AGG | - | tig0043337:6823-6842 | Msa1463510:intron | 45.0% | |
| ACCGTTGTTAACTCGCTTCT+TGG | - | tig0043337:6948-6967 | Msa1463510:intron | 45.0% | |
| TGTTAACTCGCTTCTTGGTC+AGG | - | tig0043337:6953-6972 | Msa1463510:intron | 45.0% | |
| GCAGGACACAATTCATGTTG+TGG | - | tig0043337:7093-7112 | Msa1463510:intron | 45.0% | |
| TGGAGATTACTTCTTGCGTC+AGG | - | tig0043337:7138-7157 | Msa1463510:intron | 45.0% | |
| ! | CTTCTTGCGTCAGGTTGTTA+AGG | - | tig0043337:7147-7166 | Msa1463510:intron | 45.0% |
| ! | TGCGTCAGGTTGTTAAGGTA+TGG | - | tig0043337:7152-7171 | Msa1463510:intron | 45.0% |
| CAAGCTGCAAACAAGACAGA+CGG | + | tig0043337:7311-7330 | Msa1463510:intergenic | 45.0% | |
| CGAGATGGACAGTATAAAGC+TGG | - | tig0043337:7344-7363 | Msa1463510:CDS | 45.0% | |
| !! | CTGGAGTGAGTTGATGTACT+TGG | - | tig0043337:7363-7382 | Msa1463510:CDS | 45.0% |
| GATGTACTTGGCACCCTTAT+CGG | - | tig0043337:7375-7394 | Msa1463510:CDS | 45.0% | |
| !!! | ACATATTTTAATTTTATTTT+GGG | + | tig0043337:4911-4930 | Msa1463510:intergenic | 5.0% |
| !! | AAGTAATTTATATATTAAAA+GGG | + | tig0043337:6337-6356 | Msa1463510:intergenic | 5.0% |
| !! | TAAGTAATTTATATATTAAA+AGG | + | tig0043337:6338-6357 | Msa1463510:intergenic | 5.0% |
| !! | TTGTTTATTAAATATATATT+TGG | - | tig0043337:6576-6595 | Msa1463510:intron | 5.0% |
| ACTGGATCGGGAACGAAGTT+GGG | + | tig0043337:2455-2474 | Msa1463510:intergenic | 50.0% | |
| ACGGTAGAGGTGAACAACGA+AGG | + | tig0043337:2483-2502 | Msa1463510:intergenic | 50.0% | |
| TCTCTCTGATGTGACGGTAG+AGG | + | tig0043337:2496-2515 | Msa1463510:intergenic | 50.0% | |
| GTATTGAGCGACAGCGTCTA+CGG | + | tig0043337:2603-2622 | Msa1463510:intergenic | 50.0% | |
| GTCTTCTCTACCGTGAGATG+TGG | - | tig0043337:2645-2664 | Msa1463510:three_prime_UTR | 50.0% | |
| TAGGAGTGAGACGAGCATAG+AGG | + | tig0043337:2679-2698 | Msa1463510:intergenic | 50.0% | |
| TCGATTCTCTGACGAAGCGT+AGG | + | tig0043337:2698-2717 | Msa1463510:intergenic | 50.0% | |
| AGACTCTGGGCCTGTTTGAA+TGG | - | tig0043337:3302-3321 | Msa1463510:intron | 50.0% | |
| TCAGATACTCGAGCAGGAGA+AGG | - | tig0043337:3833-3852 | Msa1463510:intron | 50.0% | |
| ATACTCGAGCAGGAGAAGGA+AGG | - | tig0043337:3837-3856 | Msa1463510:intron | 50.0% | |
| TACTCGAGCAGGAGAAGGAA+GGG | - | tig0043337:3838-3857 | Msa1463510:intron | 50.0% | |
| GCTGAGGGTTCATTGTCTCT+TGG | - | tig0043337:3950-3969 | Msa1463510:intron | 50.0% | |
| ! | TCACACTGGTCTCAAGTGCT+TGG | - | tig0043337:3980-3999 | Msa1463510:intron | 50.0% |
| TTGCCAATCTTATGCTCCGC+AGG | - | tig0043337:4081-4100 | Msa1463510:intron | 50.0% | |
| TGACCTGCGGAGCATAAGAT+TGG | + | tig0043337:4087-4106 | Msa1463510:intergenic | 50.0% | |
| TTAGTGGAAGTCGTGACCTG+CGG | + | tig0043337:4100-4119 | Msa1463510:intergenic | 50.0% | |
| ! | TCAAGCATCTTTGAGGGGAG+GGG | - | tig0043337:5259-5278 | Msa1463510:intron | 50.0% |
| CATCAACAAGCCTGCTTTGG+GGG | + | tig0043337:5557-5576 | Msa1463510:intergenic | 50.0% | |
| !! | TTCAAAACTGGGCGCTGAAG+GGG | + | tig0043337:5703-5722 | Msa1463510:intergenic | 50.0% |
| !! | CTTCAAAACTGGGCGCTGAA+GGG | + | tig0043337:5704-5723 | Msa1463510:intergenic | 50.0% |
| !! | TCTTCAAAACTGGGCGCTGA+AGG | + | tig0043337:5705-5724 | Msa1463510:intergenic | 50.0% |
| !! | GCTTTTTGGGAGATGGAGCT+AGG | + | tig0043337:5968-5987 | Msa1463510:intergenic | 50.0% |
| CTGATTCTCGCCTTCAAGCT+AGG | + | tig0043337:6995-7014 | Msa1463510:intergenic | 50.0% | |
| CTAGCTTGAAGGCGAGAATC+AGG | - | tig0043337:6993-7012 | Msa1463510:intron | 50.0% | |
| GAAGGCGAGAATCAGGCTTT+AGG | - | tig0043337:7000-7019 | Msa1463510:intron | 50.0% | |
| GTATGGTTGCGTCTCCTTTG+CGG | - | tig0043337:7169-7188 | Msa1463510:intron | 50.0% | |
| CGTCTCCAAGCTCAAGACCT+AGG | - | tig0043337:2422-2441 | Msa1463510:three_prime_UTR | 55.0% | |
| CGTAGCCTAGGTCTTGAGCT+TGG | + | tig0043337:2430-2449 | Msa1463510:intergenic | 55.0% | |
| CGAAGTTGGGATCGTAGCCT+AGG | + | tig0043337:2442-2461 | Msa1463510:intergenic | 55.0% | |
| GACTGGATCGGGAACGAAGT+TGG | + | tig0043337:2456-2475 | Msa1463510:intergenic | 55.0% | |
| GGTGGCGAAACCACATCTCA+CGG | + | tig0043337:2658-2677 | Msa1463510:intergenic | 55.0% | |
| GAGTGAGACGAGCATAGAGG+TGG | + | tig0043337:2676-2695 | Msa1463510:intergenic | 55.0% | |
| ACGGCTGGGCCTTTCAAAAG+CGG | - | tig0043337:7702-7721 | Msa1463510:exon | 55.0% | |
| !! | GCGACTCCTCCGCTTTTGAA+AGG | + | tig0043337:7714-7733 | Msa1463510:intergenic | 55.0% |
| TGAGCGACAGCGTCTACGGA+GGG | + | tig0043337:2599-2618 | Msa1463510:intergenic | 60.0% | |
| TTGAGCGACAGCGTCTACGG+AGG | + | tig0043337:2600-2619 | Msa1463510:intergenic | 60.0% | |
| GCTGGGCCTTTCAAAAGCGG+AGG | - | tig0043337:7705-7724 | Msa1463510:exon | 60.0% | |
| ACAGCGTCTACGGAGGGCCA+TGG | + | tig0043337:2593-2612 | Msa1463510:intergenic | 65.0% | |
| !! | GCTTTGGGGGCAGAGCGAGA+GGG | + | tig0043337:5544-5563 | Msa1463510:intergenic | 65.0% |
| !! | TGCTTTGGGGGCAGAGCGAG+AGG | + | tig0043337:5545-5564 | Msa1463510:intergenic | 65.0% |
| TCTCGCTCTGCCCCCAAAGC+AGG | - | tig0043337:5544-5563 | Msa1463510:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0043337 | gene | 2300 | 7817 | 2300 | ID=Msa1463510;Name=Msa1463510 |
| tig0043337 | mRNA | 2300 | 7817 | 2300 | ID=Msa1463510-mRNA-1;Parent=Msa1463510;Name=Msa1463510-mRNA-1;_AED=0.03;_eAED=0.03;_QI=104|0.71|0.87|0.87|1|1|8|446|526 |
| tig0043337 | exon | 2300 | 2790 | 2300 | ID=Msa1463510-mRNA-1:exon:24098;Parent=Msa1463510-mRNA-1 |
| tig0043337 | exon | 2949 | 3020 | 2949 | ID=Msa1463510-mRNA-1:exon:24097;Parent=Msa1463510-mRNA-1 |
| tig0043337 | exon | 3384 | 3477 | 3384 | ID=Msa1463510-mRNA-1:exon:24096;Parent=Msa1463510-mRNA-1 |
| tig0043337 | exon | 3593 | 3741 | 3593 | ID=Msa1463510-mRNA-1:exon:24095;Parent=Msa1463510-mRNA-1 |
| tig0043337 | exon | 3863 | 3907 | 3863 | ID=Msa1463510-mRNA-1:exon:24094;Parent=Msa1463510-mRNA-1 |
| tig0043337 | exon | 4371 | 4710 | 4371 | ID=Msa1463510-mRNA-1:exon:24093;Parent=Msa1463510-mRNA-1 |
| tig0043337 | exon | 6015 | 6346 | 6015 | ID=Msa1463510-mRNA-1:exon:24092;Parent=Msa1463510-mRNA-1 |
| tig0043337 | exon | 7210 | 7817 | 7210 | ID=Msa1463510-mRNA-1:exon:24091;Parent=Msa1463510-mRNA-1 |
| tig0043337 | five_prime_UTR | 7714 | 7817 | 7714 | ID=Msa1463510-mRNA-1:five_prime_utr;Parent=Msa1463510-mRNA-1 |
| tig0043337 | CDS | 7210 | 7713 | 7210 | ID=Msa1463510-mRNA-1:cds;Parent=Msa1463510-mRNA-1 |
| tig0043337 | CDS | 6015 | 6346 | 6015 | ID=Msa1463510-mRNA-1:cds;Parent=Msa1463510-mRNA-1 |
| tig0043337 | CDS | 4371 | 4710 | 4371 | ID=Msa1463510-mRNA-1:cds;Parent=Msa1463510-mRNA-1 |
| tig0043337 | CDS | 3863 | 3907 | 3863 | ID=Msa1463510-mRNA-1:cds;Parent=Msa1463510-mRNA-1 |
| tig0043337 | CDS | 3593 | 3741 | 3593 | ID=Msa1463510-mRNA-1:cds;Parent=Msa1463510-mRNA-1 |
| tig0043337 | CDS | 3384 | 3477 | 3384 | ID=Msa1463510-mRNA-1:cds;Parent=Msa1463510-mRNA-1 |
| tig0043337 | CDS | 2949 | 3020 | 2949 | ID=Msa1463510-mRNA-1:cds;Parent=Msa1463510-mRNA-1 |
| tig0043337 | CDS | 2746 | 2790 | 2746 | ID=Msa1463510-mRNA-1:cds;Parent=Msa1463510-mRNA-1 |
| tig0043337 | three_prime_UTR | 2300 | 2745 | 2300 | ID=Msa1463510-mRNA-1:three_prime_utr;Parent=Msa1463510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
