Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083700 | XP_003626299.1 | 99.291 | 282 | 2 | 0 | 1 | 282 | 1 | 282 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083700 | sp|Q54TS4|YIPF1_DICDI | 33.761 | 234 | 148 | 3 | 49 | 281 | 96 | 323 | 3.82e-39 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083700 | G7KYP9 | 99.291 | 282 | 2 | 0 | 1 | 282 | 1 | 282 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017730 | Msa1083700 | 0.863390 | 2.575232e-64 | -8.615850e-47 |
| Msa0071410 | Msa1083700 | 0.810234 | 1.275701e-50 | -8.615850e-47 |
| Msa0077340 | Msa1083700 | 0.805661 | 1.198591e-49 | -8.615850e-47 |
| Msa0093850 | Msa1083700 | 0.825599 | 4.292879e-54 | -8.615850e-47 |
| Msa0098240 | Msa1083700 | 0.831360 | 1.744710e-55 | -8.615850e-47 |
| Msa0610690 | Msa1083700 | 0.814435 | 1.542666e-51 | -8.615850e-47 |
| Msa0626460 | Msa1083700 | 0.806586 | 7.653507e-50 | -8.615850e-47 |
| Msa0675120 | Msa1083700 | 0.841338 | 5.047296e-58 | -8.615850e-47 |
| Msa0693330 | Msa1083700 | 0.835049 | 2.103958e-56 | -8.615850e-47 |
| Msa0702720 | Msa1083700 | 0.831180 | 1.931994e-55 | -8.615850e-47 |
| Msa0703950 | Msa1083700 | 0.800548 | 1.368472e-48 | -8.615850e-47 |
| Msa0124910 | Msa1083700 | 0.803306 | 3.712771e-49 | -8.615850e-47 |
| Msa0125360 | Msa1083700 | 0.802677 | 5.008141e-49 | -8.615850e-47 |
| Msa0142430 | Msa1083700 | 0.803903 | 2.791232e-49 | -8.615850e-47 |
| Msa0169410 | Msa1083700 | 0.809861 | 1.535031e-50 | -8.615850e-47 |
| Msa0195640 | Msa1083700 | 0.823873 | 1.095876e-53 | -8.615850e-47 |
| Msa0199940 | Msa1083700 | 0.802074 | 6.667013e-49 | -8.615850e-47 |
| Msa0209140 | Msa1083700 | 0.813936 | 1.988424e-51 | -8.615850e-47 |
| Msa0225480 | Msa1083700 | 0.840704 | 7.407665e-58 | -8.615850e-47 |
| Msa0370490 | Msa1083700 | 0.829388 | 5.294555e-55 | -8.615850e-47 |
| Msa0417970 | Msa1083700 | 0.845472 | 3.975457e-59 | -8.615850e-47 |
| Msa1039100 | Msa1083700 | 0.868296 | 7.255139e-66 | -8.615850e-47 |
| Msa1083700 | Msa1169660 | 0.810880 | 9.250325e-51 | -8.615850e-47 |
| Msa1083700 | Msa1210040 | 0.818766 | 1.651936e-52 | -8.615850e-47 |
| Msa1083700 | Msa1259160 | 0.810685 | 1.019473e-50 | -8.615850e-47 |
| Msa1083700 | Msa1260220 | 0.801356 | 9.359293e-49 | -8.615850e-47 |
| Msa1083700 | Msa1292020 | 0.802314 | 5.948855e-49 | -8.615850e-47 |
| Msa1083700 | Msa1299650 | 0.813608 | 2.348430e-51 | -8.615850e-47 |
| Msa1083700 | Msa1341840 | 0.802303 | 5.980910e-49 | -8.615850e-47 |
| Msa1083700 | Msa1381260 | 0.981625 | 4.792799e-153 | -8.615850e-47 |
| Msa1083700 | Msa1391500 | 0.805891 | 1.072356e-49 | -8.615850e-47 |
| Msa1083700 | Msa1398810 | 0.821996 | 2.999159e-53 | -8.615850e-47 |
| Msa1083700 | Msa1422590 | 0.819131 | 1.364562e-52 | -8.615850e-47 |
| Msa1083700 | Msa1429580 | 0.802851 | 4.610932e-49 | -8.615850e-47 |
| Msa1083700 | Msa1461370 | 0.800120 | 1.672499e-48 | -8.615850e-47 |
| Msa0339020 | Msa1083700 | 0.801017 | 1.097879e-48 | -8.615850e-47 |
| Msa0341690 | Msa1083700 | 0.804769 | 1.842529e-49 | -8.615850e-47 |
| Msa0579080 | Msa1083700 | 0.807245 | 5.553532e-50 | -8.615850e-47 |
| Msa0579160 | Msa1083700 | 0.808457 | 3.068672e-50 | -8.615850e-47 |
| Msa0579220 | Msa1083700 | 0.807715 | 4.414679e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083700 | MtrunA17_Chr7g0272931 | 99.291 | 282 | 2 | 0 | 1 | 282 | 1 | 282 | 0.0 | 570 |
| Msa1083700 | MtrunA17_Chr5g0436001 | 37.722 | 281 | 162 | 6 | 2 | 278 | 1 | 272 | 2.47e-58 | 187 |
| Msa1083700 | MtrunA17_Chr3g0112431 | 36.655 | 281 | 165 | 5 | 2 | 278 | 1 | 272 | 3.85e-52 | 171 |
| Msa1083700 | MtrunA17_Chr3g0112461 | 36.585 | 246 | 146 | 4 | 2 | 243 | 1 | 240 | 7.62e-46 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1083700 | AT5G27490.1 | 79.433 | 282 | 58 | 0 | 1 | 282 | 1 | 282 | 1.41e-173 | 481 |
| Msa1083700 | AT3G05280.1 | 77.936 | 281 | 62 | 0 | 2 | 282 | 1 | 281 | 6.55e-159 | 443 |
| Msa1083700 | AT2G39805.1 | 37.589 | 282 | 155 | 7 | 7 | 278 | 4 | 274 | 5.03e-57 | 184 |
| Msa1083700 | AT2G39805.2 | 37.589 | 282 | 156 | 7 | 7 | 278 | 4 | 275 | 1.50e-55 | 181 |
Find 98 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAATTAATGAATTTCTAAA+AGG | 0.247110 | 7_2:-84022481 | None:intergenic |
| GTTCAACTATTCTGCCTATA+TGG | 0.275933 | 7_2:+84022075 | Msa1083700:CDS |
| AATATTTGTAGCAGCATCTA+TGG | 0.291783 | 7_2:+84021891 | Msa1083700:CDS |
| TCAGTTAACCTCTTGATGTT+GGG | 0.301686 | 7_2:+84022698 | Msa1083700:three_prime_UTR |
| TTTGTGTAATCATTCGTTTA+TGG | 0.311941 | 7_2:+84022536 | Msa1083700:three_prime_UTR |
| TACTCAGGTATGGACCATTC+TGG | 0.345340 | 7_2:+84021854 | Msa1083700:intron |
| AAAAGGTCTACTTACAAATC+AGG | 0.347085 | 7_2:-84020443 | None:intergenic |
| TTTGTTTCATAATGCAATTA+TGG | 0.353945 | 7_2:+84022585 | Msa1083700:three_prime_UTR |
| GGAAGATTACCGGTGGTTCT+AGG | 0.365279 | 7_2:+84019380 | Msa1083700:CDS |
| TGGGTGATTGCAGGTGTGGC+AGG | 0.371118 | 7_2:+84022251 | Msa1083700:CDS |
| AGGTGGTTCTTCATTGTTGC+TGG | 0.371924 | 7_2:+84022335 | Msa1083700:CDS |
| CATTTGTGGCACTTAACCTT+CGG | 0.374032 | 7_2:+84022288 | Msa1083700:CDS |
| CAATCCAGTTTCCTCTTAAA+CGG | 0.381688 | 7_2:-84022417 | None:intergenic |
| CAAGCTCAGGGGAAGATTAC+CGG | 0.388535 | 7_2:+84019370 | Msa1083700:CDS |
| GAGCTGGAATAAAGACAAAC+AGG | 0.390832 | 7_2:-84022104 | None:intergenic |
| TTCTTCTGATGAACCTCAGC+AGG | 0.399077 | 7_2:+84020286 | Msa1083700:CDS |
| GTTTGTCTTTATTCCAGCTC+TGG | 0.400569 | 7_2:+84022107 | Msa1083700:CDS |
| CTCAGCAGGGTGGTTGGCTT+CGG | 0.402877 | 7_2:+84020300 | Msa1083700:CDS |
| TCATTAAAAGTTCCTCTGAA+TGG | 0.411432 | 7_2:-84020404 | None:intergenic |
| ACAAGCTGAAGGATCAGAAA+TGG | 0.419782 | 7_2:+84021938 | Msa1083700:CDS |
| ACGGTGACCGGTGGTGGATC+TGG | 0.425336 | 7_2:-84019169 | None:intergenic |
| TTCAGTTAACCTCTTGATGT+TGG | 0.430518 | 7_2:+84022697 | Msa1083700:three_prime_UTR |
| ATTGATAGTCAACAGCTTCA+AGG | 0.431513 | 7_2:+84019037 | Msa1083700:CDS |
| CTTCACGGTATCCGTTTAAG+AGG | 0.439293 | 7_2:+84022406 | Msa1083700:exon |
| CAGTTAACCTCTTGATGTTG+GGG | 0.440160 | 7_2:+84022699 | Msa1083700:three_prime_UTR |
| ATATTCAGATGGGTGATTGC+AGG | 0.441456 | 7_2:+84022242 | Msa1083700:CDS |
| ATTTCCTCCATCGCAAGCTC+AGG | 0.446741 | 7_2:+84019357 | Msa1083700:CDS |
| GAAGTATCGACATCAAAGTA+TGG | 0.450124 | 7_2:-84020347 | None:intergenic |
| GTATCCGTTTAAGAGGAAAC+TGG | 0.456417 | 7_2:+84022413 | Msa1083700:exon |
| ATTTGTGGCACTTAACCTTC+GGG | 0.459603 | 7_2:+84022289 | Msa1083700:CDS |
| AATCTGGTGACTTGGTCTGC+TGG | 0.463897 | 7_2:+84021973 | Msa1083700:CDS |
| GAGAAGCAACTTACCAGAGC+TGG | 0.464299 | 7_2:-84022120 | None:intergenic |
| CAAACAGGGAATATCCATAT+AGG | 0.469322 | 7_2:-84022089 | None:intergenic |
| TCTGTTGCAGTTGGCTTTAG+CGG | 0.472890 | 7_2:+84022364 | Msa1083700:CDS |
| TCACATTAACAAGGCAACTT+AGG | 0.477799 | 7_2:+84022658 | Msa1083700:three_prime_UTR |
| ATTAAAGATCTACCTCTTCA+CGG | 0.481807 | 7_2:+84022391 | Msa1083700:CDS |
| ATGGGACTATGACATAAATC+TGG | 0.483862 | 7_2:+84021957 | Msa1083700:CDS |
| GTGTTTGTCCATTGTCCCAT+TGG | 0.488665 | 7_2:+84022217 | Msa1083700:intron |
| ATGAACCTCAGCAGGGTGGT+TGG | 0.497811 | 7_2:+84020294 | Msa1083700:CDS |
| GGAAAGATGATGCAAGGAGG+AGG | 0.498848 | 7_2:+84019001 | Msa1083700:exon |
| ATGAAATATATATACGATGA+AGG | 0.500353 | 7_2:+84022445 | Msa1083700:three_prime_UTR |
| AACTTGACGGTGACCGGTGG+TGG | 0.508137 | 7_2:-84019175 | None:intergenic |
| GTTCATGTCAGCAACATTTG+TGG | 0.509994 | 7_2:+84022274 | Msa1083700:CDS |
| CAAGCTGAAGGATCAGAAAT+GGG | 0.517844 | 7_2:+84021939 | Msa1083700:CDS |
| CCCATCTGAATATATCCAAT+GGG | 0.523908 | 7_2:-84022232 | None:intergenic |
| TTCCCCTGAGCTTGCGATGG+AGG | 0.524017 | 7_2:-84019361 | None:intergenic |
| ATCTTCCCCTGAGCTTGCGA+TGG | 0.526679 | 7_2:-84019364 | None:intergenic |
| CCAGTGAACTTGACGGTGAC+CGG | 0.528555 | 7_2:-84019181 | None:intergenic |
| CGGGCACATATCATGTCGGC+AGG | 0.530948 | 7_2:+84022308 | Msa1083700:CDS |
| CCCATTGGATATATTCAGAT+GGG | 0.538766 | 7_2:+84022232 | Msa1083700:CDS |
| CCGGTCACCGTCAAGTTCAC+TGG | 0.541760 | 7_2:+84019181 | Msa1083700:CDS |
| TCCCATTGGATATATTCAGA+TGG | 0.544799 | 7_2:+84022231 | Msa1083700:CDS |
| TCATCAGAAGAACCAGATGC+AGG | 0.552062 | 7_2:-84020275 | None:intergenic |
| GTTCGTACCAGTGAACTTGA+CGG | 0.552167 | 7_2:-84019188 | None:intergenic |
| GGGTGATTGCAGGTGTGGCA+GGG | 0.554516 | 7_2:+84022252 | Msa1083700:CDS |
| TGCATTATGAAACAAATCAC+AGG | 0.556690 | 7_2:-84022578 | None:intergenic |
| GAAGAAGGAAAGATGATGCA+AGG | 0.556931 | 7_2:+84018995 | Msa1083700:exon |
| ATGACATAAATCTGGTGACT+TGG | 0.561043 | 7_2:+84021965 | Msa1083700:CDS |
| GTATAGACAAAGAGGAATGA+TGG | 0.561761 | 7_2:-84022016 | None:intergenic |
| ACCCATCTGAATATATCCAA+TGG | 0.568674 | 7_2:-84022233 | None:intergenic |
| ATATCATGTCGGCAGGTGAA+AGG | 0.568955 | 7_2:+84022315 | Msa1083700:CDS |
| ATACTTTGATGTCGATACTT+CGG | 0.569777 | 7_2:+84020349 | Msa1083700:CDS |
| GAATATATCCAATGGGACAA+TGG | 0.572781 | 7_2:-84022225 | None:intergenic |
| TGTGGATCTGAAGAAGAAGA+AGG | 0.574954 | 7_2:+84018980 | Msa1083700:five_prime_UTR |
| GACCGGTGGTGGATCTGGAA+CGG | 0.576104 | 7_2:-84019164 | None:intergenic |
| CCGGTACAGAGAAGTATTTG+AGG | 0.576562 | 7_2:-84022044 | None:intergenic |
| AAAGGTCTACTTACAAATCA+GGG | 0.579016 | 7_2:-84020442 | None:intergenic |
| CCTCAAATACTTCTCTGTAC+CGG | 0.581136 | 7_2:+84022044 | Msa1083700:CDS |
| AGTTAACCTCTTGATGTTGG+GGG | 0.583244 | 7_2:+84022700 | Msa1083700:three_prime_UTR |
| TTTCCTCCATCGCAAGCTCA+GGG | 0.583701 | 7_2:+84019358 | Msa1083700:CDS |
| TCGAGGTGGCCTAGAACCAC+CGG | 0.584989 | 7_2:-84019389 | None:intergenic |
| ATATTTGTAGCAGCATCTAT+GGG | 0.585347 | 7_2:+84021892 | Msa1083700:CDS |
| CAAATACTTCTCTGTACCGG+CGG | 0.587474 | 7_2:+84022047 | Msa1083700:CDS |
| GGCCGTTCCAGATCCACCAC+CGG | 0.597655 | 7_2:+84019162 | Msa1083700:intron |
| CAGATGGGTGATTGCAGGTG+TGG | 0.599018 | 7_2:+84022247 | Msa1083700:CDS |
| AGGATTACGTATAGACAAAG+AGG | 0.600243 | 7_2:-84022024 | None:intergenic |
| GTCTACTTACAAATCAGGGT+TGG | 0.601290 | 7_2:-84020438 | None:intergenic |
| AGAGTGGTGCAAATCCAGAA+TGG | 0.616599 | 7_2:-84021868 | None:intergenic |
| AACTGTTGTTCACATTAACA+AGG | 0.618893 | 7_2:+84022649 | Msa1083700:three_prime_UTR |
| TCTTCTGATGAACCTCAGCA+GGG | 0.619382 | 7_2:+84020287 | Msa1083700:CDS |
| AAATACTTCTCTGTACCGGC+GGG | 0.619911 | 7_2:+84022048 | Msa1083700:CDS |
| ATATATAGCACACAAGCTGA+AGG | 0.625103 | 7_2:+84021927 | Msa1083700:CDS |
| AGGCCACCTCGAGATGCAGA+TGG | 0.625410 | 7_2:+84019400 | Msa1083700:CDS |
| CGAAGCCAACCACCCTGCTG+AGG | 0.631145 | 7_2:-84020299 | None:intergenic |
| TGCTGCTACAAATATTAGAG+TGG | 0.638926 | 7_2:-84021884 | None:intergenic |
| TCTGATGAACCTCAGCAGGG+TGG | 0.640708 | 7_2:+84020290 | Msa1083700:CDS |
| CTTAAACGGATACCGTGAAG+AGG | 0.641911 | 7_2:-84022403 | None:intergenic |
| TCATGTCGGCAGGTGAAAGG+TGG | 0.649545 | 7_2:+84022318 | Msa1083700:CDS |
| ATACTTCGGATGTTCTAGAG+AGG | 0.653109 | 7_2:+84020363 | Msa1083700:CDS |
| AAAATACCATCTGCATCTCG+AGG | 0.655529 | 7_2:-84019406 | None:intergenic |
| GAAGGAAAGATGATGCAAGG+AGG | 0.657050 | 7_2:+84018998 | Msa1083700:exon |
| AATAGTTGAACAAGTCCCGC+CGG | 0.666349 | 7_2:-84022063 | None:intergenic |
| CCTTCGGGCACATATCATGT+CGG | 0.666772 | 7_2:+84022304 | Msa1083700:CDS |
| TTCCTCCATCGCAAGCTCAG+GGG | 0.676586 | 7_2:+84019359 | Msa1083700:CDS |
| ATACCATCTGCATCTCGAGG+TGG | 0.680065 | 7_2:-84019403 | None:intergenic |
| AGCTGGAATAAAGACAAACA+GGG | 0.694942 | 7_2:-84022103 | None:intergenic |
| GCTCAGGGGAAGATTACCGG+TGG | 0.714030 | 7_2:+84019373 | Msa1083700:CDS |
| GTGAACTTGACGGTGACCGG+TGG | 0.721035 | 7_2:-84019178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATATATTTAAAGAATTAT+TGG | - | chr7_2:84020497-84020516 | None:intergenic | 10.0% |
| !! | TATAAGTGCTTAATTAAATT+GGG | - | chr7_2:84019613-84019632 | None:intergenic | 15.0% |
| !! | ATTAAATATTGTAGCTAAAT+TGG | + | chr7_2:84020579-84020598 | Msa1083700:intron | 15.0% |
| !! | ATAATAGAATTAGAGTATAA+CGG | - | chr7_2:84021538-84021557 | None:intergenic | 15.0% |
| !!! | TTTTTTATTATATTTGAGAC+CGG | - | chr7_2:84021628-84021647 | None:intergenic | 15.0% |
| !!! | CTTTTAGAAATTCATTAATT+CGG | + | chr7_2:84022482-84022501 | Msa1083700:three_prime_UTR | 15.0% |
| !!! | AATTAACCGATTCAATTAAA+CGG | + | chr7_2:84019244-84019263 | Msa1083700:intron | 20.0% |
| !! | TATTATTGTGATTAAAAGAC+TGG | - | chr7_2:84019472-84019491 | None:intergenic | 20.0% |
| !! | TACAGATCAAATATCAAAAT+TGG | - | chr7_2:84019501-84019520 | None:intergenic | 20.0% |
| !! | CTATAAGTGCTTAATTAAAT+TGG | - | chr7_2:84019614-84019633 | None:intergenic | 20.0% |
| !!! | GATTTTAGTTTTACTGATAT+TGG | + | chr7_2:84019895-84019914 | Msa1083700:intron | 20.0% |
| !! | TCAATATTCAATTTCAACTA+TGG | + | chr7_2:84020528-84020547 | Msa1083700:intron | 20.0% |
| !!! | ACTATCATCTACATTATTTT+AGG | - | chr7_2:84020626-84020645 | None:intergenic | 20.0% |
| !! | ATTGAAGAACTATAATACAT+TGG | + | chr7_2:84020649-84020668 | Msa1083700:intron | 20.0% |
| !!! | TATTATGTTTTCCCTTTATT+TGG | + | chr7_2:84020697-84020716 | Msa1083700:intron | 20.0% |
| !! | CTATATGAACTAACATAATT+TGG | + | chr7_2:84021218-84021237 | Msa1083700:intron | 20.0% |
| !! | ATATCAGAAATAAGTATTAG+TGG | - | chr7_2:84021404-84021423 | None:intergenic | 20.0% |
| !!! | CTAATACTTATTTCTGATAT+AGG | + | chr7_2:84021404-84021423 | Msa1083700:intron | 20.0% |
| !! | TATACTCTAATTCTATTATC+TGG | + | chr7_2:84021539-84021558 | Msa1083700:intron | 20.0% |
| !!! | TTTAGTCTCTTTTTTATTTG+TGG | + | chr7_2:84021570-84021589 | Msa1083700:intron | 20.0% |
| !!! | TATTTTATATAGTACTACTC+CGG | - | chr7_2:84021744-84021763 | None:intergenic | 20.0% |
| !! | AGTAGTACTATATAAAATAC+TGG | + | chr7_2:84021745-84021764 | Msa1083700:intron | 20.0% |
| !! | ATGAAATATATATACGATGA+AGG | + | chr7_2:84022445-84022464 | Msa1083700:three_prime_UTR | 20.0% |
| !! | CGAATTAATGAATTTCTAAA+AGG | - | chr7_2:84022484-84022503 | None:intergenic | 20.0% |
| !! | TTTGTTTCATAATGCAATTA+TGG | + | chr7_2:84022585-84022604 | Msa1083700:three_prime_UTR | 20.0% |
| ! | AAAGAAGAGAAAAGTTATAC+AGG | - | chr7_2:84019070-84019089 | None:intergenic | 25.0% |
| ! | CAGAAAGAAAAAGAAAAGAA+AGG | - | chr7_2:84019098-84019117 | None:intergenic | 25.0% |
| ! | GAAATCAGAATGATAGAATT+TGG | - | chr7_2:84019122-84019141 | None:intergenic | 25.0% |
| ! | CATTGAGGTAATTAATTTCA+TGG | - | chr7_2:84019572-84019591 | None:intergenic | 25.0% |
| ! | CATGAAATTAATTACCTCAA+TGG | + | chr7_2:84019570-84019589 | Msa1083700:intron | 25.0% |
| !! | AGCTATAAACCATTTTCATA+AGG | + | chr7_2:84019709-84019728 | Msa1083700:intron | 25.0% |
| ! | TCATATTTACTTGATATGCA+CGG | + | chr7_2:84020016-84020035 | Msa1083700:intron | 25.0% |
| !! | AAAATTTCTAGAAGCACAAA+AGG | - | chr7_2:84020156-84020175 | None:intergenic | 25.0% |
| !!! | TTGTGCTTCTAGAAATTTTA+TGG | + | chr7_2:84020157-84020176 | Msa1083700:intron | 25.0% |
| ! | AATAAAATGAGCAACAGAAA+AGG | - | chr7_2:84020463-84020482 | None:intergenic | 25.0% |
| ! | ATTCAATTTCAACTATGGTT+TGG | + | chr7_2:84020533-84020552 | Msa1083700:intron | 25.0% |
| !!! | TATAATACATTGGTGGTTTT+GGG | + | chr7_2:84020659-84020678 | Msa1083700:intron | 25.0% |
| ! | GCGAATATATAATAACCTAT+TGG | - | chr7_2:84020833-84020852 | None:intergenic | 25.0% |
| ! | TAGAAAACATAAGAACTAAC+AGG | - | chr7_2:84020870-84020889 | None:intergenic | 25.0% |
| !! | TCTTTTGATCATCATTGTAT+TGG | + | chr7_2:84021058-84021077 | Msa1083700:intron | 25.0% |
| !! | TCTTTTGATCATCATTGTAT+TGG | + | chr7_2:84021058-84021077 | Msa1083700:intron | 25.0% |
| ! | AACATAATTTGGAGATTACA+AGG | + | chr7_2:84021229-84021248 | Msa1083700:intron | 25.0% |
| !! | AAAAGCAACTTTTCCTTTTA+GGG | + | chr7_2:84021273-84021292 | Msa1083700:intron | 25.0% |
| !! | ACTATAGAAGTATAGTCTAT+GGG | - | chr7_2:84021375-84021394 | None:intergenic | 25.0% |
| ! | AGAAAAGACTACAATTGTTA+AGG | - | chr7_2:84021474-84021493 | None:intergenic | 25.0% |
| !! | TCAAACAAAGTTGAAGTATT+TGG | - | chr7_2:84021692-84021711 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTATATTTGAGAC+CGG | + | chr7_2:84021722-84021741 | Msa1083700:intron | 25.0% |
| ! | TTTGTGTAATCATTCGTTTA+TGG | + | chr7_2:84022536-84022555 | Msa1083700:three_prime_UTR | 25.0% |
| AAGAAAAAGAGATAGATCTG+TGG | + | chr7_2:84018962-84018981 | Msa1083700:five_prime_UTR | 30.0% | |
| TAACAGAATGAGAATGCAAT+TGG | - | chr7_2:84019225-84019244 | None:intergenic | 30.0% | |
| AGTGATCCGTTTAATTGAAT+CGG | - | chr7_2:84019253-84019272 | None:intergenic | 30.0% | |
| !! | ACCATTTTCATAAGGTATCT+TGG | + | chr7_2:84019717-84019736 | Msa1083700:intron | 30.0% |
| TCCAAGATACCTTATGAAAA+TGG | - | chr7_2:84019721-84019740 | None:intergenic | 30.0% | |
| ATAAGCTAAAAAACAACTCG+TGG | + | chr7_2:84019754-84019773 | Msa1083700:intron | 30.0% | |
| AGATGACATCAAACTTCAAA+GGG | + | chr7_2:84019867-84019886 | Msa1083700:intron | 30.0% | |
| CATATTTACTTGATATGCAC+GGG | + | chr7_2:84020017-84020036 | Msa1083700:intron | 30.0% | |
| ATACTTTGATGTCGATACTT+CGG | + | chr7_2:84020349-84020368 | Msa1083700:CDS | 30.0% | |
| TCATTAAAAGTTCCTCTGAA+TGG | - | chr7_2:84020407-84020426 | None:intergenic | 30.0% | |
| AAAGGTCTACTTACAAATCA+GGG | - | chr7_2:84020445-84020464 | None:intergenic | 30.0% | |
| AAAAGGTCTACTTACAAATC+AGG | - | chr7_2:84020446-84020465 | None:intergenic | 30.0% | |
| GAAGAACTATAATACATTGG+TGG | + | chr7_2:84020652-84020671 | Msa1083700:intron | 30.0% | |
| !! | CTATAATACATTGGTGGTTT+TGG | + | chr7_2:84020658-84020677 | Msa1083700:intron | 30.0% |
| !! | TATGTTTTCCCTTTATTTGG+CGG | + | chr7_2:84020700-84020719 | Msa1083700:intron | 30.0% |
| ! | CAATGTGAAGAAGTATATCT+CGG | + | chr7_2:84020765-84020784 | Msa1083700:intron | 30.0% |
| CAATATCTTGTATTGCCAAT+AGG | + | chr7_2:84020815-84020834 | Msa1083700:intron | 30.0% | |
| TAAGAACTAACAGGTTTACT+TGG | - | chr7_2:84020861-84020880 | None:intergenic | 30.0% | |
| ! | CTTTGTTTATGCATATTAGC+CGG | + | chr7_2:84020927-84020946 | Msa1083700:intron | 30.0% |
| ! | TCATGAACAGGATCTTTTTA+GGG | - | chr7_2:84021024-84021043 | None:intergenic | 30.0% |
| ! | TTCATGAACAGGATCTTTTT+AGG | - | chr7_2:84021025-84021044 | None:intergenic | 30.0% |
| ! | TCATGAACAGGATCTTTTTA+GGG | - | chr7_2:84021024-84021043 | None:intergenic | 30.0% |
| ! | TTCATGAACAGGATCTTTTT+AGG | - | chr7_2:84021025-84021044 | None:intergenic | 30.0% |
| ! | TATAGGAACTGATTCTAACA+TGG | - | chr7_2:84021173-84021192 | None:intergenic | 30.0% |
| !! | CTAAAAGGAAAAGTTGCTTT+TGG | - | chr7_2:84021274-84021293 | None:intergenic | 30.0% |
| ! | CAAAAGCAACTTTTCCTTTT+AGG | + | chr7_2:84021272-84021291 | Msa1083700:intron | 30.0% |
| ! | GACTATAGAAGTATAGTCTA+TGG | - | chr7_2:84021376-84021395 | None:intergenic | 30.0% |
| ! | AATTGTAGTCTTTTCTTGCT+TGG | + | chr7_2:84021478-84021497 | Msa1083700:intron | 30.0% |
| ACTCTAATTCTATTATCTGG+TGG | + | chr7_2:84021542-84021561 | Msa1083700:intron | 30.0% | |
| ATTTGTGGAAACATCATATG+TGG | + | chr7_2:84021585-84021604 | Msa1083700:intron | 30.0% | |
| ! | TTATTATATTTGAGACCGGA+GGG | - | chr7_2:84021624-84021643 | None:intergenic | 30.0% |
| ! | TTTATTATATTTGAGACCGG+AGG | - | chr7_2:84021625-84021644 | None:intergenic | 30.0% |
| !!! | AATACTGGTTTTCTAAGAAG+AGG | + | chr7_2:84021760-84021779 | Msa1083700:intron | 30.0% |
| !!! | TGCCAGTTTTTTAACTTTAG+AGG | + | chr7_2:84021787-84021806 | Msa1083700:intron | 30.0% |
| !!! | GCCAGTTTTTTAACTTTAGA+GGG | + | chr7_2:84021788-84021807 | Msa1083700:intron | 30.0% |
| !! | TCCCTCTAAAGTTAAAAAAC+TGG | - | chr7_2:84021792-84021811 | None:intergenic | 30.0% |
| AATATTTGTAGCAGCATCTA+TGG | + | chr7_2:84021891-84021910 | Msa1083700:CDS | 30.0% | |
| ATATTTGTAGCAGCATCTAT+GGG | + | chr7_2:84021892-84021911 | Msa1083700:CDS | 30.0% | |
| AACAAAAGGTTTCACATTTC+AGG | - | chr7_2:84022190-84022209 | None:intergenic | 30.0% | |
| ATTAAAGATCTACCTCTTCA+CGG | + | chr7_2:84022391-84022410 | Msa1083700:CDS | 30.0% | |
| ! | ACGATGAAGGAATAACTTTT+TGG | + | chr7_2:84022458-84022477 | Msa1083700:three_prime_UTR | 30.0% |
| TGCATTATGAAACAAATCAC+AGG | - | chr7_2:84022581-84022600 | None:intergenic | 30.0% | |
| TGCGTTATGAAAAAAATCAC+AGG | - | chr7_2:84022630-84022649 | None:intergenic | 30.0% | |
| AACTGTTGTTCACATTAACA+AGG | + | chr7_2:84022649-84022668 | Msa1083700:three_prime_UTR | 30.0% | |
| ! | ATTGATAGTCAACAGCTTCA+AGG | + | chr7_2:84019037-84019056 | Msa1083700:CDS | 35.0% |
| CACTTAATCTCGTTTCTTTC+AGG | + | chr7_2:84019141-84019160 | Msa1083700:intron | 35.0% | |
| AGCAACTATTAACACCATTG+AGG | - | chr7_2:84019587-84019606 | None:intergenic | 35.0% | |
| AAGTCCTTGTAAGACTGTTT+GGG | - | chr7_2:84019809-84019828 | None:intergenic | 35.0% | |
| TAAGTCCTTGTAAGACTGTT+TGG | - | chr7_2:84019810-84019829 | None:intergenic | 35.0% | |
| GCTAGTCGATAAATTCAAAC+AGG | + | chr7_2:84019831-84019850 | Msa1083700:intron | 35.0% | |
| GAGATGACATCAAACTTCAA+AGG | + | chr7_2:84019866-84019885 | Msa1083700:intron | 35.0% | |
| ! | AGATTCAGTTGTGTGTTACT+TGG | - | chr7_2:84019953-84019972 | None:intergenic | 35.0% |
| GGAATTTAGAAAGATGTGAC+TGG | + | chr7_2:84020078-84020097 | Msa1083700:intron | 35.0% | |
| TCTGCATAAAATGAGTCACA+TGG | - | chr7_2:84020242-84020261 | None:intergenic | 35.0% | |
| ! | TCATTTTCAAAACCTGCATC+TGG | + | chr7_2:84020263-84020282 | Msa1083700:CDS | 35.0% |
| !! | GAAGTATCGACATCAAAGTA+TGG | - | chr7_2:84020350-84020369 | None:intergenic | 35.0% |
| !!! | GATTCACTTTTTCCATTCAG+AGG | + | chr7_2:84020392-84020411 | Msa1083700:CDS | 35.0% |
| AAGTGAACTGAGTATAGTCA+GGG | + | chr7_2:84020952-84020971 | Msa1083700:intron | 35.0% | |
| AAGATCCTGTTCATGAAACA+TGG | + | chr7_2:84021028-84021047 | Msa1083700:intron | 35.0% | |
| AGATCCTGTTCATGAAACAT+GGG | + | chr7_2:84021029-84021048 | Msa1083700:intron | 35.0% | |
| AAGATCCTGTTCATGAAACA+TGG | + | chr7_2:84021028-84021047 | Msa1083700:intron | 35.0% | |
| AGATCCTGTTCATGAAACAT+GGG | + | chr7_2:84021029-84021048 | Msa1083700:intron | 35.0% | |
| TAACATGGACAAGTGTTACA+AGG | - | chr7_2:84021158-84021177 | None:intergenic | 35.0% | |
| TCCTATATAGTCACTATTCC+AGG | + | chr7_2:84021186-84021205 | Msa1083700:intron | 35.0% | |
| CCTATATAGTCACTATTCCA+GGG | + | chr7_2:84021187-84021206 | Msa1083700:intron | 35.0% | |
| TTCATATAGATGTTAGTCCC+TGG | - | chr7_2:84021207-84021226 | None:intergenic | 35.0% | |
| !! | TTCCTTTTAGGGATTCAAAC+CGG | + | chr7_2:84021284-84021303 | Msa1083700:intron | 35.0% |
| CAAAACTGGTGCATATTACT+GGG | + | chr7_2:84021331-84021350 | Msa1083700:intron | 35.0% | |
| GCATATTACTGGGACTAAAT+AGG | + | chr7_2:84021341-84021360 | Msa1083700:intron | 35.0% | |
| CCTAAATGCTTGAATGGTAA+CGG | + | chr7_2:84021436-84021455 | Msa1083700:intron | 35.0% | |
| AGTATAACGGTTAGTAGTCA+TGG | - | chr7_2:84021525-84021544 | None:intergenic | 35.0% | |
| ACCATAATTGTACTCAGGTA+TGG | + | chr7_2:84021844-84021863 | Msa1083700:intron | 35.0% | |
| TCCATACCTGAGTACAATTA+TGG | - | chr7_2:84021848-84021867 | None:intergenic | 35.0% | |
| TGCTGCTACAAATATTAGAG+TGG | - | chr7_2:84021887-84021906 | None:intergenic | 35.0% | |
| ATATATAGCACACAAGCTGA+AGG | + | chr7_2:84021927-84021946 | Msa1083700:CDS | 35.0% | |
| ATGGGACTATGACATAAATC+TGG | + | chr7_2:84021957-84021976 | Msa1083700:CDS | 35.0% | |
| ATGACATAAATCTGGTGACT+TGG | + | chr7_2:84021965-84021984 | Msa1083700:CDS | 35.0% | |
| GTATAGACAAAGAGGAATGA+TGG | - | chr7_2:84022019-84022038 | None:intergenic | 35.0% | |
| AGGATTACGTATAGACAAAG+AGG | - | chr7_2:84022027-84022046 | None:intergenic | 35.0% | |
| GTTCAACTATTCTGCCTATA+TGG | + | chr7_2:84022075-84022094 | Msa1083700:CDS | 35.0% | |
| CAAACAGGGAATATCCATAT+AGG | - | chr7_2:84022092-84022111 | None:intergenic | 35.0% | |
| AGCTGGAATAAAGACAAACA+GGG | - | chr7_2:84022106-84022125 | None:intergenic | 35.0% | |
| CAAACACTGCACAAAACAAA+AGG | - | chr7_2:84022204-84022223 | None:intergenic | 35.0% | |
| GAATATATCCAATGGGACAA+TGG | - | chr7_2:84022228-84022247 | None:intergenic | 35.0% | |
| TCCCATTGGATATATTCAGA+TGG | + | chr7_2:84022231-84022250 | Msa1083700:CDS | 35.0% | |
| CCCATCTGAATATATCCAAT+GGG | - | chr7_2:84022235-84022254 | None:intergenic | 35.0% | |
| CCCATTGGATATATTCAGAT+GGG | + | chr7_2:84022232-84022251 | Msa1083700:CDS | 35.0% | |
| ACCCATCTGAATATATCCAA+TGG | - | chr7_2:84022236-84022255 | None:intergenic | 35.0% | |
| ! | TGGTATTTTTCTGTTGCAGT+TGG | + | chr7_2:84022355-84022374 | Msa1083700:CDS | 35.0% |
| CAATCCAGTTTCCTCTTAAA+CGG | - | chr7_2:84022420-84022439 | None:intergenic | 35.0% | |
| TCACATTAACAAGGCAACTT+AGG | + | chr7_2:84022658-84022677 | Msa1083700:three_prime_UTR | 35.0% | |
| TTCAGTTAACCTCTTGATGT+TGG | + | chr7_2:84022697-84022716 | Msa1083700:three_prime_UTR | 35.0% | |
| TCAGTTAACCTCTTGATGTT+GGG | + | chr7_2:84022698-84022717 | Msa1083700:three_prime_UTR | 35.0% | |
| TGTGGATCTGAAGAAGAAGA+AGG | + | chr7_2:84018980-84018999 | Msa1083700:five_prime_UTR | 40.0% | |
| GAAGAAGGAAAGATGATGCA+AGG | + | chr7_2:84018995-84019014 | Msa1083700:exon | 40.0% | |
| AACGGATCACTTTCCATTGT+CGG | + | chr7_2:84019262-84019281 | Msa1083700:intron | 40.0% | |
| AATGAAATTCGCGCTACTTG+CGG | - | chr7_2:84019291-84019310 | None:intergenic | 40.0% | |
| AAAATACCATCTGCATCTCG+AGG | - | chr7_2:84019409-84019428 | None:intergenic | 40.0% | |
| TTCATGGTGACTAGCAATGA+TGG | - | chr7_2:84019556-84019575 | None:intergenic | 40.0% | |
| TTCAAACAGGTCCATAGTAG+AGG | + | chr7_2:84019844-84019863 | Msa1083700:intron | 40.0% | |
| TGATGTCATCTCCTCTACTA+TGG | - | chr7_2:84019858-84019877 | None:intergenic | 40.0% | |
| CATCAAACTTCAAAGGGACT+TGG | + | chr7_2:84019873-84019892 | Msa1083700:intron | 40.0% | |
| CTGATATTGGAGATACTCGA+CGG | + | chr7_2:84019908-84019927 | Msa1083700:intron | 40.0% | |
| TGATATTGGAGATACTCGAC+GGG | + | chr7_2:84019909-84019928 | Msa1083700:intron | 40.0% | |
| TTCTGTCTGTGAATGTCTGA+TGG | + | chr7_2:84020057-84020076 | Msa1083700:intron | 40.0% | |
| AGAAAGATGTGACTGGAAGA+AGG | + | chr7_2:84020085-84020104 | Msa1083700:intron | 40.0% | |
| ACTGGAAGAAGGAACTGTAA+GGG | + | chr7_2:84020096-84020115 | Msa1083700:intron | 40.0% | |
| AAGGAACTGTAAGGGAAACA+TGG | + | chr7_2:84020104-84020123 | Msa1083700:intron | 40.0% | |
| AGGAACTGTAAGGGAAACAT+GGG | + | chr7_2:84020105-84020124 | Msa1083700:intron | 40.0% | |
| !! | ATACTTCGGATGTTCTAGAG+AGG | + | chr7_2:84020363-84020382 | Msa1083700:CDS | 40.0% |
| GTCTACTTACAAATCAGGGT+TGG | - | chr7_2:84020441-84020460 | None:intergenic | 40.0% | |
| GTAGCTAAATTGGTGAGTTG+TGG | + | chr7_2:84020589-84020608 | Msa1083700:intron | 40.0% | |
| !!! | CATTATTTTAGGACTGCCAG+TGG | - | chr7_2:84020615-84020634 | None:intergenic | 40.0% |
| CTATACTCAGTTCACTTCTC+CGG | - | chr7_2:84020949-84020968 | None:intergenic | 40.0% | |
| GAAGTGAACTGAGTATAGTC+AGG | + | chr7_2:84020951-84020970 | Msa1083700:intron | 40.0% | |
| AACTCCCATGTTTCATGAAC+AGG | - | chr7_2:84021036-84021055 | None:intergenic | 40.0% | |
| AACTCCCATGTTTCATGAAC+AGG | - | chr7_2:84021036-84021055 | None:intergenic | 40.0% | |
| CCCTGGAATAGTGACTATAT+AGG | - | chr7_2:84021190-84021209 | None:intergenic | 40.0% | |
| CAAGGACTTGAACCAAAACA+AGG | + | chr7_2:84021247-84021266 | Msa1083700:intron | 40.0% | |
| !!! | GTTGCTTTTGGTCCTTGTTT+TGG | - | chr7_2:84021262-84021281 | None:intergenic | 40.0% |
| !! | TCCTTTTAGGGATTCAAACC+GGG | + | chr7_2:84021285-84021304 | Msa1083700:intron | 40.0% |
| AAACCGGGTAGAATGTTGTA+GGG | + | chr7_2:84021300-84021319 | Msa1083700:intron | 40.0% | |
| AATCCCTACAACATTCTACC+CGG | - | chr7_2:84021306-84021325 | None:intergenic | 40.0% | |
| GTAGGGATTAAAGCCAAAAC+TGG | + | chr7_2:84021317-84021336 | Msa1083700:intron | 40.0% | |
| ! | CCAGTAATATGCACCAGTTT+TGG | - | chr7_2:84021333-84021352 | None:intergenic | 40.0% |
| CCAAAACTGGTGCATATTAC+TGG | + | chr7_2:84021330-84021349 | Msa1083700:intron | 40.0% | |
| TCCACTCCTAAATGCTTGAA+TGG | + | chr7_2:84021430-84021449 | Msa1083700:intron | 40.0% | |
| ACCATTCAAGCATTTAGGAG+TGG | - | chr7_2:84021434-84021453 | None:intergenic | 40.0% | |
| CCGTTACCATTCAAGCATTT+AGG | - | chr7_2:84021439-84021458 | None:intergenic | 40.0% | |
| AGCTCACCATAATTGTACTC+AGG | + | chr7_2:84021839-84021858 | Msa1083700:intron | 40.0% | |
| ACAAGCTGAAGGATCAGAAA+TGG | + | chr7_2:84021938-84021957 | Msa1083700:CDS | 40.0% | |
| CAAGCTGAAGGATCAGAAAT+GGG | + | chr7_2:84021939-84021958 | Msa1083700:CDS | 40.0% | |
| !!! | TGGTCTGCTGGTTTGTTTTA+TGG | + | chr7_2:84021985-84022004 | Msa1083700:CDS | 40.0% |
| CCTCAAATACTTCTCTGTAC+CGG | + | chr7_2:84022044-84022063 | Msa1083700:CDS | 40.0% | |
| GAGCTGGAATAAAGACAAAC+AGG | - | chr7_2:84022107-84022126 | None:intergenic | 40.0% | |
| GTTTGTCTTTATTCCAGCTC+TGG | + | chr7_2:84022107-84022126 | Msa1083700:CDS | 40.0% | |
| ATATTCAGATGGGTGATTGC+AGG | + | chr7_2:84022242-84022261 | Msa1083700:CDS | 40.0% | |
| GTTCATGTCAGCAACATTTG+TGG | + | chr7_2:84022274-84022293 | Msa1083700:CDS | 40.0% | |
| CATTTGTGGCACTTAACCTT+CGG | + | chr7_2:84022288-84022307 | Msa1083700:CDS | 40.0% | |
| ATTTGTGGCACTTAACCTTC+GGG | + | chr7_2:84022289-84022308 | Msa1083700:CDS | 40.0% | |
| GTATCCGTTTAAGAGGAAAC+TGG | + | chr7_2:84022413-84022432 | Msa1083700:exon | 40.0% | |
| GAAGGAAAGATGATGCAAGG+AGG | + | chr7_2:84018998-84019017 | Msa1083700:exon | 45.0% | |
| GTTCGTACCAGTGAACTTGA+CGG | - | chr7_2:84019191-84019210 | None:intergenic | 45.0% | |
| CTCTCCCAAACAGTCTTACA+AGG | + | chr7_2:84019802-84019821 | Msa1083700:intron | 45.0% | |
| GACTGGAAGAAGGAACTGTA+AGG | + | chr7_2:84020095-84020114 | Msa1083700:intron | 45.0% | |
| TCATCAGAAGAACCAGATGC+AGG | - | chr7_2:84020278-84020297 | None:intergenic | 45.0% | |
| TTCTTCTGATGAACCTCAGC+AGG | + | chr7_2:84020286-84020305 | Msa1083700:CDS | 45.0% | |
| TCTTCTGATGAACCTCAGCA+GGG | + | chr7_2:84020287-84020306 | Msa1083700:CDS | 45.0% | |
| ! | ACCCGGTTTGAATCCCTAAA+AGG | - | chr7_2:84021289-84021308 | None:intergenic | 45.0% |
| CAAACCGGGTAGAATGTTGT+AGG | + | chr7_2:84021299-84021318 | Msa1083700:intron | 45.0% | |
| ! | GGCCTAATTTTTACTCCCTC+CGG | + | chr7_2:84021606-84021625 | Msa1083700:intron | 45.0% |
| GACCGGAGGGAGTAAAAATT+AGG | - | chr7_2:84021611-84021630 | None:intergenic | 45.0% | |
| TACTCAGGTATGGACCATTC+TGG | + | chr7_2:84021854-84021873 | Msa1083700:intron | 45.0% | |
| AGAGTGGTGCAAATCCAGAA+TGG | - | chr7_2:84021871-84021890 | None:intergenic | 45.0% | |
| !! | CCGGTACAGAGAAGTATTTG+AGG | - | chr7_2:84022047-84022066 | None:intergenic | 45.0% |
| CAAATACTTCTCTGTACCGG+CGG | + | chr7_2:84022047-84022066 | Msa1083700:CDS | 45.0% | |
| ! | AAATACTTCTCTGTACCGGC+GGG | + | chr7_2:84022048-84022067 | Msa1083700:CDS | 45.0% |
| AATAGTTGAACAAGTCCCGC+CGG | - | chr7_2:84022066-84022085 | None:intergenic | 45.0% | |
| GTGTTTGTCCATTGTCCCAT+TGG | + | chr7_2:84022217-84022236 | Msa1083700:intron | 45.0% | |
| ATATCATGTCGGCAGGTGAA+AGG | + | chr7_2:84022315-84022334 | Msa1083700:CDS | 45.0% | |
| AGGTGGTTCTTCATTGTTGC+TGG | + | chr7_2:84022335-84022354 | Msa1083700:CDS | 45.0% | |
| !! | TCTGTTGCAGTTGGCTTTAG+CGG | + | chr7_2:84022364-84022383 | Msa1083700:CDS | 45.0% |
| CTTAAACGGATACCGTGAAG+AGG | - | chr7_2:84022406-84022425 | None:intergenic | 45.0% | |
| CTTCACGGTATCCGTTTAAG+AGG | + | chr7_2:84022406-84022425 | Msa1083700:exon | 45.0% | |
| GGAAAGATGATGCAAGGAGG+AGG | + | chr7_2:84019001-84019020 | Msa1083700:exon | 50.0% | |
| CTACTTGCGGAATCCGACAA+TGG | - | chr7_2:84019278-84019297 | None:intergenic | 50.0% | |
| ATTTCCTCCATCGCAAGCTC+AGG | + | chr7_2:84019357-84019376 | Msa1083700:CDS | 50.0% | |
| TTTCCTCCATCGCAAGCTCA+GGG | + | chr7_2:84019358-84019377 | Msa1083700:CDS | 50.0% | |
| CAAGCTCAGGGGAAGATTAC+CGG | + | chr7_2:84019370-84019389 | Msa1083700:CDS | 50.0% | |
| GGAAGATTACCGGTGGTTCT+AGG | + | chr7_2:84019380-84019399 | Msa1083700:CDS | 50.0% | |
| ATACCATCTGCATCTCGAGG+TGG | - | chr7_2:84019406-84019425 | None:intergenic | 50.0% | |
| AATTGGTGAGTTGTGGCCAC+TGG | + | chr7_2:84020596-84020615 | Msa1083700:intron | 50.0% | |
| CCAGCTCACCGCCAAATAAA+GGG | - | chr7_2:84020711-84020730 | None:intergenic | 50.0% | |
| ! | CCTTTATTTGGCGGTGAGCT+GGG | + | chr7_2:84020709-84020728 | Msa1083700:intron | 50.0% |
| ! | CTTTATTTGGCGGTGAGCTG+GGG | + | chr7_2:84020710-84020729 | Msa1083700:intron | 50.0% |
| ! | GTCTTTTCTTGCTTGGCTGC+TGG | + | chr7_2:84021485-84021504 | Msa1083700:intron | 50.0% |
| !! | AATCTGGTGACTTGGTCTGC+TGG | + | chr7_2:84021973-84021992 | Msa1083700:CDS | 50.0% |
| GAGAAGCAACTTACCAGAGC+TGG | - | chr7_2:84022123-84022142 | None:intergenic | 50.0% | |
| CCTTCGGGCACATATCATGT+CGG | + | chr7_2:84022304-84022323 | Msa1083700:CDS | 50.0% | |
| CCAGTGAACTTGACGGTGAC+CGG | - | chr7_2:84019184-84019203 | None:intergenic | 55.0% | |
| TTCCTCCATCGCAAGCTCAG+GGG | + | chr7_2:84019359-84019378 | Msa1083700:CDS | 55.0% | |
| ATCTTCCCCTGAGCTTGCGA+TGG | - | chr7_2:84019367-84019386 | None:intergenic | 55.0% | |
| TCTGATGAACCTCAGCAGGG+TGG | + | chr7_2:84020290-84020309 | Msa1083700:CDS | 55.0% | |
| ATGAACCTCAGCAGGGTGGT+TGG | + | chr7_2:84020294-84020313 | Msa1083700:CDS | 55.0% | |
| ! | CCCTTTATTTGGCGGTGAGC+TGG | + | chr7_2:84020708-84020727 | Msa1083700:intron | 55.0% |
| CCCAGCTCACCGCCAAATAA+AGG | - | chr7_2:84020712-84020731 | None:intergenic | 55.0% | |
| CAGATGGGTGATTGCAGGTG+TGG | + | chr7_2:84022247-84022266 | Msa1083700:CDS | 55.0% | |
| CCGACATGATATGTGCCCGA+AGG | - | chr7_2:84022307-84022326 | None:intergenic | 55.0% | |
| TCATGTCGGCAGGTGAAAGG+TGG | + | chr7_2:84022318-84022337 | Msa1083700:CDS | 55.0% | |
| !! | GACCGGTGGTGGATCTGGAA+CGG | - | chr7_2:84019167-84019186 | None:intergenic | 60.0% |
| AACTTGACGGTGACCGGTGG+TGG | - | chr7_2:84019178-84019197 | None:intergenic | 60.0% | |
| GTGAACTTGACGGTGACCGG+TGG | - | chr7_2:84019181-84019200 | None:intergenic | 60.0% | |
| CCGGTCACCGTCAAGTTCAC+TGG | + | chr7_2:84019181-84019200 | Msa1083700:CDS | 60.0% | |
| TTCCCCTGAGCTTGCGATGG+AGG | - | chr7_2:84019364-84019383 | None:intergenic | 60.0% | |
| GCTCAGGGGAAGATTACCGG+TGG | + | chr7_2:84019373-84019392 | Msa1083700:CDS | 60.0% | |
| TCGAGGTGGCCTAGAACCAC+CGG | - | chr7_2:84019392-84019411 | None:intergenic | 60.0% | |
| AGGCCACCTCGAGATGCAGA+TGG | + | chr7_2:84019400-84019419 | Msa1083700:CDS | 60.0% | |
| !! | CTCAGCAGGGTGGTTGGCTT+CGG | + | chr7_2:84020300-84020319 | Msa1083700:CDS | 60.0% |
| TGGGTGATTGCAGGTGTGGC+AGG | + | chr7_2:84022251-84022270 | Msa1083700:CDS | 60.0% | |
| GGGTGATTGCAGGTGTGGCA+GGG | + | chr7_2:84022252-84022271 | Msa1083700:CDS | 60.0% | |
| CGGGCACATATCATGTCGGC+AGG | + | chr7_2:84022308-84022327 | Msa1083700:CDS | 60.0% | |
| GGCCGTTCCAGATCCACCAC+CGG | + | chr7_2:84019162-84019181 | Msa1083700:intron | 65.0% | |
| !! | ACGGTGACCGGTGGTGGATC+TGG | - | chr7_2:84019172-84019191 | None:intergenic | 65.0% |
| CGAAGCCAACCACCCTGCTG+AGG | - | chr7_2:84020302-84020321 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84018876 | 84022721 | 84018876 | ID=Msa1083700;Name=Msa1083700 |
| chr7_2 | mRNA | 84018876 | 84022721 | 84018876 | ID=Msa1083700-mRNA-1;Parent=Msa1083700;Name=Msa1083700-mRNA-1;_AED=0.02;_eAED=0.02;_QI=131|1|1|1|1|1|6|297|282 |
| chr7_2 | exon | 84018876 | 84019069 | 84018876 | ID=Msa1083700-mRNA-1:exon:22266;Parent=Msa1083700-mRNA-1 |
| chr7_2 | exon | 84019163 | 84019202 | 84019163 | ID=Msa1083700-mRNA-1:exon:22267;Parent=Msa1083700-mRNA-1 |
| chr7_2 | exon | 84019341 | 84019421 | 84019341 | ID=Msa1083700-mRNA-1:exon:22268;Parent=Msa1083700-mRNA-1 |
| chr7_2 | exon | 84020261 | 84020450 | 84020261 | ID=Msa1083700-mRNA-1:exon:22269;Parent=Msa1083700-mRNA-1 |
| chr7_2 | exon | 84021861 | 84022128 | 84021861 | ID=Msa1083700-mRNA-1:exon:22270;Parent=Msa1083700-mRNA-1 |
| chr7_2 | exon | 84022218 | 84022721 | 84022218 | ID=Msa1083700-mRNA-1:exon:22271;Parent=Msa1083700-mRNA-1 |
| chr7_2 | five_prime_UTR | 84018876 | 84019006 | 84018876 | ID=Msa1083700-mRNA-1:five_prime_utr;Parent=Msa1083700-mRNA-1 |
| chr7_2 | CDS | 84019007 | 84019069 | 84019007 | ID=Msa1083700-mRNA-1:cds;Parent=Msa1083700-mRNA-1 |
| chr7_2 | CDS | 84019163 | 84019202 | 84019163 | ID=Msa1083700-mRNA-1:cds;Parent=Msa1083700-mRNA-1 |
| chr7_2 | CDS | 84019341 | 84019421 | 84019341 | ID=Msa1083700-mRNA-1:cds;Parent=Msa1083700-mRNA-1 |
| chr7_2 | CDS | 84020261 | 84020450 | 84020261 | ID=Msa1083700-mRNA-1:cds;Parent=Msa1083700-mRNA-1 |
| chr7_2 | CDS | 84021861 | 84022128 | 84021861 | ID=Msa1083700-mRNA-1:cds;Parent=Msa1083700-mRNA-1 |
| chr7_2 | CDS | 84022218 | 84022424 | 84022218 | ID=Msa1083700-mRNA-1:cds;Parent=Msa1083700-mRNA-1 |
| chr7_2 | three_prime_UTR | 84022425 | 84022721 | 84022425 | ID=Msa1083700-mRNA-1:three_prime_utr;Parent=Msa1083700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
