AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1127290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127290 MtrunA17_Chr7g0269971 94.843 989 24 2 1 989 1 962 0.0 1926
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127290 AT2G47390.1 73.852 1002 208 8 1 989 1 961 0.0 1486

Find 281 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGGTACTACAAAGGATTT+TGG 0.176444 7_3:+78854822 Msa1127290:CDS
CGCACACTATTGGATGTAAT+TGG 0.187206 7_3:-78855029 None:intergenic
ATGTCATTCTACACCGGTTT+AGG 0.190826 7_3:+78854333 Msa1127290:CDS
CTCCATAACTCTACCTTCTT+TGG 0.204039 7_3:-78854951 None:intergenic
GCCAACTAATAAAATTATAT+TGG 0.224218 7_3:-78856730 None:intergenic
AAGGGATGCGTTCTATTAAT+TGG 0.232507 7_3:+78855054 Msa1127290:CDS
ACCTGCATGGTTAATGTTCC+TGG 0.237707 7_3:-78858086 None:intergenic
CCCTTCTTTGGCTGGCTAAA+AGG 0.247608 7_3:+78857017 Msa1127290:CDS
ATGTTAGATGATTCAGCTTT+AGG 0.249725 7_3:+78854111 Msa1127290:intron
CCAGGAACCAAAGGTTTCTT+TGG 0.255796 7_3:-78854666 None:intergenic
AAATTTATCTTCGCACCTTC+AGG 0.267105 7_3:-78854414 None:intergenic
ATACTAGTAAACTCAGAGTA+TGG 0.276226 7_3:+78854502 Msa1127290:CDS
CATCCCTTTCCGCACACTAT+TGG 0.287295 7_3:-78855039 None:intergenic
GTTCCACGTCAGCCCTTCTT+TGG 0.287647 7_3:+78857005 Msa1127290:CDS
CCAAAGAAACCTTTGGTTCC+TGG 0.299895 7_3:+78854666 Msa1127290:CDS
GGCTCTCCAAATGAATTTGC+AGG 0.321351 7_3:+78856977 Msa1127290:CDS
ATAAGCCATCAACGCTTTAC+TGG 0.328861 7_3:+78855084 Msa1127290:CDS
AACAGAACCCTTACTCCTTT+CGG 0.334629 7_3:+78857765 Msa1127290:CDS
TGTCATTCTACACCGGTTTA+GGG 0.339719 7_3:+78854334 Msa1127290:CDS
GTATCTACAGAGGAATTTCT+TGG 0.343312 7_3:+78856185 Msa1127290:intron
CCAATCCCTGCAAATTCATT+TGG 0.345807 7_3:-78856983 None:intergenic
AGACGGTCCTTTGCCATGTT+TGG 0.348852 7_3:+78856901 Msa1127290:CDS
CACGTCAGCCCTTCTTTGGC+TGG 0.352807 7_3:+78857009 Msa1127290:CDS
CCAAATGAATTTGCAGGGAT+TGG 0.353554 7_3:+78856983 Msa1127290:CDS
AAGGAGATTTACAGTTAGAT+AGG 0.354368 7_3:+78856666 Msa1127290:CDS
ATGCATGTCCTTTGGGAAAC+AGG 0.358343 7_3:+78858344 Msa1127290:CDS
TTCTTTGCTGCCACTTCCAC+TGG 0.366293 7_3:-78858489 None:intergenic
CAGGTAGTAAGGAACGAATC+TGG 0.368966 7_3:+78856585 Msa1127290:CDS
GTCCTTTGCCATGTTTGGTT+TGG 0.372525 7_3:+78856906 Msa1127290:CDS
GTGTTCCTCCACCTGTGATC+AGG 0.380200 7_3:+78854145 Msa1127290:CDS
TTGGCTGGTTTACGTATTGA+TGG 0.381621 7_3:+78854288 Msa1127290:CDS
GGCCCAACCATTCCTATTAT+CGG 0.383067 7_3:+78857193 Msa1127290:CDS
TGGGTTGCAGATGTGGAAAC+AGG 0.384759 7_3:+78854522 Msa1127290:CDS
CCAACTAATAAAATTATATT+GGG 0.389207 7_3:-78856729 None:intergenic
CAGCAGTGAGAGGTGCTAAA+TGG 0.390176 7_3:-78853345 None:intergenic
AAAGCATCATGCATGTCCTT+TGG 0.391552 7_3:+78858336 Msa1127290:CDS
TGCAGGTTTGCAATCCTATC+TGG 0.394529 7_3:+78857172 Msa1127290:intron
ATCATAATGTACTTCTCATC+TGG 0.396199 7_3:-78854879 None:intergenic
AGGAATGGAACGTTCCCTTC+TGG 0.397491 7_3:-78856457 None:intergenic
TATTCAAGTAAGAACATTCC+AGG 0.401088 7_3:+78854725 Msa1127290:CDS
CAAGGTACAATAAAAGAGTA+TGG 0.402576 7_3:-78854918 None:intergenic
GGTGGAGCTCCACGAGTTGA+TGG 0.405378 7_3:-78854645 None:intergenic
AAGCATCATGCATGTCCTTT+GGG 0.405693 7_3:+78858337 Msa1127290:CDS
TTCTTGGTGTGATGATTCAC+TGG 0.405757 7_3:+78856201 Msa1127290:CDS
GAATGAAGACAGAACTCTTT+GGG 0.410153 7_3:+78857968 Msa1127290:intron
GGTGGACATGGAGGCGAAGT+TGG 0.411211 7_3:-78853311 None:intergenic
CTATACCAGTAAAGCGTTGA+TGG 0.417274 7_3:-78855089 None:intergenic
GAATAGAAGCAGCAAGCAAT+TGG 0.426131 7_3:-78858205 None:intergenic
TTCCAAAGAAGGTAGAGTTA+TGG 0.426707 7_3:+78854949 Msa1127290:CDS
CCAAAATGTTGCAGAAATAC+AGG 0.431225 7_3:+78856566 Msa1127290:intron
AAGGATAAATGTCGAGCATC+AGG 0.434606 7_3:-78854450 None:intergenic
TGTTGTGGAATTGCTCGTTC+TGG 0.435538 7_3:+78857735 Msa1127290:CDS
ATTCATGACTGCCAACCTTC+TGG 0.436917 7_3:+78857692 Msa1127290:CDS
GTGAAGTAGAGGCTAATGAT+AGG 0.437329 7_3:+78857221 Msa1127290:CDS
GGCAAAGGACCGTCTGTTGA+TGG 0.438693 7_3:-78856893 None:intergenic
AGAATGAAGACAGAACTCTT+TGG 0.438942 7_3:+78857967 Msa1127290:intron
GTGCCGATGGAAAATTTGTC+AGG 0.439578 7_3:+78854973 Msa1127290:CDS
GATGATTCAGCTTTAGGAGT+AGG 0.439917 7_3:+78854117 Msa1127290:intron
TCTTTGCTCTTAAATTCTCC+AGG 0.440008 7_3:-78856935 None:intergenic
CTTTGCAGAAAGAGATGATC+AGG 0.442100 7_3:+78856810 Msa1127290:CDS
GTGCTGCTTTGCAGTCAGAC+AGG 0.445567 7_3:+78858231 Msa1127290:CDS
CATCCAATAGTGTGCGGAAA+GGG 0.446479 7_3:+78855036 Msa1127290:CDS
GGATGTAATTGGAATGTCTT+CGG 0.447416 7_3:-78855018 None:intergenic
CCTGAAAACCGAAAGGAGTA+AGG 0.450593 7_3:-78857773 None:intergenic
GTGGTTGCAGCCAGTGGAAG+TGG 0.451041 7_3:+78858479 Msa1127290:CDS
TAGGAATGGTTGGGCCAGAT+AGG 0.452751 7_3:-78857186 None:intergenic
TCCAGCTGTTTATACCTCTC+TGG 0.453194 7_3:+78854848 Msa1127290:CDS
ATGATTCAGCTTTAGGAGTA+GGG 0.458381 7_3:+78854118 Msa1127290:CDS
TTCAATGCTCTGAAGGGTCA+TGG 0.458800 7_3:+78858257 Msa1127290:CDS
GACTATTGCAGTATTTGAAA+GGG 0.459266 7_3:+78858156 Msa1127290:intron
ATTATTGCAAAGATAAAGAA+AGG 0.459801 7_3:+78856388 Msa1127290:CDS
CTCCGTAGCATGGGAGAGCC+AGG 0.460304 7_3:-78856346 None:intergenic
GCAGGTGAAGATCATGATAC+TGG 0.460813 7_3:+78858407 Msa1127290:CDS
TCCTTTGGGAAACAGGTAGA+TGG 0.463374 7_3:+78858351 Msa1127290:CDS
GGAAGAAGAGAAGGGTTGGA+AGG 0.465107 7_3:-78853244 None:intergenic
GGAAGATATATTATACTGAA+TGG 0.466205 7_3:+78856421 Msa1127290:CDS
AGAACATGGGTAGTCTCTCC+TGG 0.466637 7_3:+78856262 Msa1127290:CDS
GCGAAAGCGGGAGGTGGACA+TGG 0.468667 7_3:-78853323 None:intergenic
AGCTCCACCAAAGAAACCTT+TGG 0.469543 7_3:+78854659 Msa1127290:CDS
TCCCCATGGATAAGCAAGAT+AGG 0.469818 7_3:-78858050 None:intergenic
AATTTATCTTCGCACCTTCA+GGG 0.471722 7_3:-78854413 None:intergenic
TACCATCAGGAAGAATTTCA+TGG 0.472908 7_3:-78854359 None:intergenic
TTGCAGAAATACAGGTAGTA+AGG 0.474978 7_3:+78856574 Msa1127290:intron
CACAAGCTTGATCTTCGCTA+TGG 0.475270 7_3:+78855854 Msa1127290:CDS
CAACCTGCTGAAGCACTAGA+AGG 0.477242 7_3:+78855812 Msa1127290:CDS
AATTTCATGGATCCCTAAAC+CGG 0.479707 7_3:-78854346 None:intergenic
GGAACCAAAGGTTTCTTTGG+TGG 0.480140 7_3:-78854663 None:intergenic
CAGAGTATGGGTTGCAGATG+TGG 0.481028 7_3:+78854515 Msa1127290:CDS
TGACTATTGCAGTATTTGAA+AGG 0.483146 7_3:+78858155 Msa1127290:intron
GAGAGGAAGAAGAGAAGGGT+TGG 0.483248 7_3:-78853248 None:intergenic
GAAGAAGAGAAGGGTTGGAA+GGG 0.484033 7_3:-78853243 None:intergenic
ACTGCATTCAAATATACATC+AGG 0.492336 7_3:-78854570 None:intergenic
CATTTGGAGAGCCTCGAACT+TGG 0.492581 7_3:-78856967 None:intergenic
AAAGCCATGGCTATTCTGCC+AGG 0.493450 7_3:+78858312 Msa1127290:CDS
AGCTTGAGTTCTCCGTAGCA+TGG 0.495658 7_3:-78856356 None:intergenic
GGGGAAGAGGATAATAATCC+AGG 0.496456 7_3:+78858068 Msa1127290:CDS
GGAGCCGTTGACGGCTCCAC+CGG 0.497877 7_3:-78853386 None:intergenic
TCCAGAGAGGTATAAACAGC+TGG 0.498640 7_3:-78854849 None:intergenic
CGCCGATAATAGGAATGGTT+GGG 0.499826 7_3:-78857195 None:intergenic
TTGTGGAAGATTTCCAAAGA+AGG 0.500118 7_3:+78854938 Msa1127290:CDS
CTTGCTTATCCATGGGGAAG+AGG 0.500526 7_3:+78858055 Msa1127290:CDS
AAGCCTATCTTGCTTATCCA+TGG 0.501636 7_3:+78858047 Msa1127290:CDS
TCGCCGATAATAGGAATGGT+TGG 0.501910 7_3:-78857196 None:intergenic
TCACCTTCTAGTGCTTCAGC+AGG 0.501916 7_3:-78855815 None:intergenic
ACATCAGGCGACTGAAACAA+AGG 0.502417 7_3:-78854555 None:intergenic
GACATGCATGATGCTTTCCC+TGG 0.504497 7_3:-78858330 None:intergenic
CTTACATGTCAAACAGATCA+AGG 0.506519 7_3:-78856477 None:intergenic
GAAAATGACAATGCAGGAAC+TGG 0.507346 7_3:-78854186 None:intergenic
GAAAGTATCGGCGGTGGCGG+AGG 0.507654 7_3:-78853416 None:intergenic
GGAGTCACATCTTCAGATCC+AGG 0.507797 7_3:-78856280 None:intergenic
CTGCCGTGGAAGAAGTTATC+CGG 0.508694 7_3:+78857524 Msa1127290:CDS
AATTGGAATGTCTTCGGCAA+GGG 0.512994 7_3:-78855012 None:intergenic
GGGTTGGAAGGGAACGATGA+TGG 0.513085 7_3:-78853232 None:intergenic
ATTCATCCTTCAGCAAATCC+TGG 0.513530 7_3:-78854743 None:intergenic
GAATAGCCATGGCTTTCATA+AGG 0.514315 7_3:-78858305 None:intergenic
GGCGGTGGCGGAGGAAGAAA+CGG 0.519648 7_3:-78853407 None:intergenic
TGTTTGGTTTGGTCTTACCC+TGG 0.521641 7_3:+78856917 Msa1127290:CDS
TTATTGCAAAGATAAAGAAA+GGG 0.522628 7_3:+78856389 Msa1127290:CDS
TCCACTGAAGACGGCGCCGG+TGG 0.524227 7_3:+78853370 Msa1127290:CDS
GGAGCGAGAGGAAGAAGAGA+AGG 0.525317 7_3:-78853253 None:intergenic
GCAAGCTGAGGGTATGGATG+AGG 0.526048 7_3:-78856785 None:intergenic
GGAAGAAACGGAGCCGTTGA+CGG 0.527449 7_3:-78853395 None:intergenic
GTCTCCACTGAAGACGGCGC+CGG 0.530072 7_3:+78853367 Msa1127290:CDS
ACGAATCTGGGAGAGTGATA+AGG 0.530372 7_3:+78856598 Msa1127290:CDS
GAGCGAGAGGAAGAAGAGAA+GGG 0.533453 7_3:-78853252 None:intergenic
ATCAGGTATCAAAGAAAAGA+CGG 0.533863 7_3:+78856827 Msa1127290:CDS
GAAGATGTATACTCTGATCC+TGG 0.534080 7_3:+78856328 Msa1127290:CDS
AGGTAGTAAGGAACGAATCT+GGG 0.534241 7_3:+78856586 Msa1127290:CDS
TAACCGTGTATCTCAACCTC+AGG 0.535508 7_3:-78854390 None:intergenic
AGCAAGGCCGGAGGAAAAGT+TGG 0.536064 7_3:+78854269 Msa1127290:CDS
GATGCTGCTAGCCAAGTTCG+AGG 0.536673 7_3:+78856956 Msa1127290:CDS
TTTGAAAGGGATAATCCCCT+TGG 0.537342 7_3:+78858169 Msa1127290:CDS
TGGAAGAAGTTATCCGGCGT+GGG 0.537418 7_3:+78857530 Msa1127290:CDS
AGGCCGGAGGAAAAGTTGGC+TGG 0.537462 7_3:+78854273 Msa1127290:CDS
TCCAGGAACATTAACCATGC+AGG 0.538098 7_3:+78858085 Msa1127290:CDS
ATGTACTTCTCATCTGGAGA+AGG 0.539513 7_3:-78854873 None:intergenic
TCAGGTATCAAAGAAAAGAC+GGG 0.540145 7_3:+78856828 Msa1127290:CDS
AGGAAACGCGGAGGAGCGAG+AGG 0.540689 7_3:-78853265 None:intergenic
TTGATGGATACTGCAATTCA+AGG 0.541115 7_3:+78854304 Msa1127290:CDS
CCAAAGAAAATAGCTGTTGG+TGG 0.541622 7_3:+78857654 Msa1127290:CDS
ATCCATGAAATTCTTCCTGA+TGG 0.542749 7_3:+78854357 Msa1127290:CDS
CTTCAGCATTCGTGTGAATG+AGG 0.543585 7_3:+78854470 Msa1127290:CDS
GTAGAAAGTATCGGCGGTGG+CGG 0.543658 7_3:-78853419 None:intergenic
GTCTGTTGTTGCTCTAATGT+CGG 0.544230 7_3:+78856634 Msa1127290:CDS
CTTCTGAAGATCGATCGAAT+AGG 0.544867 7_3:-78856309 None:intergenic
AGCCTATCTTGCTTATCCAT+GGG 0.545230 7_3:+78858048 Msa1127290:CDS
TCATGGTGCTCTAAGTCGGC+TGG 0.546433 7_3:+78858274 Msa1127290:CDS
TGTTCCTCCACCTGTGATCA+GGG 0.547665 7_3:+78854146 Msa1127290:CDS
AGGTGCTAAATGGCGAAAGC+GGG 0.548042 7_3:-78853335 None:intergenic
GATTATTATCCTCTTCCCCA+TGG 0.552898 7_3:-78858064 None:intergenic
GTCAAAGAAAATATTAGCAA+AGG 0.552992 7_3:+78858434 Msa1127290:CDS
AAAGATGCAAGCTGAGGGTA+TGG 0.553107 7_3:-78856791 None:intergenic
GGCGCCGGTGGAGCCGTCAA+CGG 0.553933 7_3:+78853382 Msa1127290:CDS
ATCCTGGCTCTCCCATGCTA+CGG 0.554759 7_3:+78856344 Msa1127290:CDS
GGAAGTGGTGCAACACCAGA+AGG 0.554759 7_3:+78856442 Msa1127290:CDS
CTCATTCACACGAATGCTGA+AGG 0.555075 7_3:-78854469 None:intergenic
AAATTCCTCTCTTACCTGCA+TGG 0.559489 7_3:-78858099 None:intergenic
TGCACCATTCCATCAACTCG+TGG 0.559943 7_3:+78854636 Msa1127290:CDS
GTGTCAAATACTTCCGATGC+AGG 0.559991 7_3:+78858389 Msa1127290:CDS
ACTGACTGAATTAGCAAGGC+CGG 0.560409 7_3:+78854257 Msa1127290:CDS
ACCATTCCTATTATCGGCGA+GGG 0.560652 7_3:+78857199 Msa1127290:CDS
ATCATGATCTTCACCTGCAT+CGG 0.560762 7_3:-78858402 None:intergenic
TATATTATACTGAATGGAAG+TGG 0.560960 7_3:+78856427 Msa1127290:CDS
TCAGGTCCTAGTGTACCATC+AGG 0.560994 7_3:-78854372 None:intergenic
AGTTGGCAGCGGTTCTGCGA+CGG 0.561939 7_3:-78853294 None:intergenic
GCTTGAGTTCTCCGTAGCAT+GGG 0.562122 7_3:-78856355 None:intergenic
TCAACGATGTCCCTGATCAC+AGG 0.562578 7_3:-78854156 None:intergenic
TACTAGTAAACTCAGAGTAT+GGG 0.565599 7_3:+78854503 Msa1127290:CDS
AGACGGAGGTGATGCAAAAG+TGG 0.567125 7_3:+78855760 Msa1127290:CDS
CATGGAGGCGAAGTTGGCAG+CGG 0.568057 7_3:-78853305 None:intergenic
AACATTCCAGGATTTGCTGA+AGG 0.568306 7_3:+78854737 Msa1127290:CDS
TTGGCTAAAGTAAGACTCCA+AGG 0.568591 7_3:-78858186 None:intergenic
AATGGTGAAAATGACAATGC+AGG 0.568762 7_3:-78854192 None:intergenic
GCTGTTGGTGGACATTCCTA+TGG 0.571097 7_3:+78857666 Msa1127290:CDS
ACAAGCTTGATCTTCGCTAT+GGG 0.571598 7_3:+78855855 Msa1127290:CDS
TTATGATTGATTCAATGCAT+AGG 0.573141 7_3:+78854895 Msa1127290:CDS
ATGCTACGGAGAACTCAAGC+TGG 0.573359 7_3:+78856358 Msa1127290:CDS
CTAATGTCGGATCAAGAAGA+AGG 0.574175 7_3:+78856647 Msa1127290:CDS
CGGTTCTGCGACGGAGAGTG+AGG 0.574207 7_3:-78853285 None:intergenic
TTTGGCCCACCAGGAACCAA+AGG 0.575186 7_3:-78854675 None:intergenic
AGCAAAGTGGTTGCAGCCAG+TGG 0.576467 7_3:+78858473 Msa1127290:CDS
TGCAAGTGCAGAGGCTGCCG+TGG 0.576961 7_3:+78857510 Msa1127290:CDS
AGGGGCATGTGCCAGAAGGT+TGG 0.577125 7_3:-78857703 None:intergenic
TCAAGCTTGTGTAATATCAC+CGG 0.578428 7_3:-78855842 None:intergenic
GTGGAAGAAGTTATCCGGCG+TGG 0.579269 7_3:+78857529 Msa1127290:CDS
AAGAATCTCATTCTCTGCCA+AGG 0.579291 7_3:+78858531 Msa1127290:CDS
ATTCTTCCTGATGGTACACT+AGG 0.579690 7_3:+78854366 Msa1127290:CDS
AGGGTCATGGTGCTCTAAGT+CGG 0.580401 7_3:+78858270 Msa1127290:CDS
CTTTGCTCTTAAATTCTCCA+GGG 0.584326 7_3:-78856934 None:intergenic
GGGTAAGACCAAACCAAACA+TGG 0.586048 7_3:-78856914 None:intergenic
TCCACCGGCGCCGTCTTCAG+TGG 0.590068 7_3:-78853371 None:intergenic
ACATCCAATAGTGTGCGGAA+AGG 0.590918 7_3:+78855035 Msa1127290:CDS
ACGCCGGATAACTTCTTCCA+CGG 0.591233 7_3:-78857527 None:intergenic
AAACAAGGCGAATAAGAACA+TGG 0.592184 7_3:+78856248 Msa1127290:CDS
TAATTGGAATGTCTTCGGCA+AGG 0.592215 7_3:-78855013 None:intergenic
AGCACTAGAAGGTGAACAGC+CGG 0.592501 7_3:+78855823 Msa1127290:CDS
TGCTAAATGGCGAAAGCGGG+AGG 0.593580 7_3:-78853332 None:intergenic
TGGCTAAAGTAAGACTCCAA+GGG 0.595706 7_3:-78858185 None:intergenic
TGTACTTCTCATCTGGAGAA+GGG 0.596924 7_3:-78854872 None:intergenic
GCTCTCCAAATGAATTTGCA+GGG 0.598282 7_3:+78856978 Msa1127290:CDS
AAGAAACCTTTGGTTCCTGG+TGG 0.598314 7_3:+78854669 Msa1127290:CDS
ATGTCCCTGATCACAGGTGG+AGG 0.598649 7_3:-78854150 None:intergenic
TATCGGCGAGGGTGAAGTAG+AGG 0.599867 7_3:+78857210 Msa1127290:CDS
CAAGCTGAGGGTATGGATGA+GGG 0.601512 7_3:-78856784 None:intergenic
GCAATTAGTTGCAAGTGCAG+AGG 0.602770 7_3:+78857501 Msa1127290:CDS
CATCCAAAGAAAATAGCTGT+TGG 0.603268 7_3:+78857651 Msa1127290:CDS
ATCTTTAGATGGTACTACAA+AGG 0.605083 7_3:+78854815 Msa1127290:CDS
CTGAAAACCGAAAGGAGTAA+GGG 0.605352 7_3:-78857772 None:intergenic
TTCTGCAAAGATGCAAGCTG+AGG 0.606032 7_3:-78856797 None:intergenic
GATGAGGGGCATGTGCCAGA+AGG 0.606367 7_3:-78857707 None:intergenic
GGCAGTCATGAATGCACCAT+AGG 0.606609 7_3:-78857682 None:intergenic
ATTGGAATGTCTTCGGCAAG+GGG 0.607891 7_3:-78855011 None:intergenic
TTTCCCTGGCAGAATAGCCA+TGG 0.608023 7_3:-78858316 None:intergenic
TAAATGGCGAAAGCGGGAGG+TGG 0.609491 7_3:-78853329 None:intergenic
CATCTCTACATAAGTATCAG+TGG 0.609514 7_3:-78857994 None:intergenic
CAGCCAAAGAAGGGCTGACG+TGG 0.610071 7_3:-78857008 None:intergenic
GGCCTTGCTAATTCAGTCAG+TGG 0.610175 7_3:-78854255 None:intergenic
GGAGAGTGGAGCGATGCCGA+TGG 0.610352 7_3:-78853195 None:intergenic
TTCGTAATCGTAGAAAGTAT+CGG 0.612481 7_3:-78853428 None:intergenic
GAGATACACGGTTACCCTGA+AGG 0.612554 7_3:+78854399 Msa1127290:CDS
ACCCTCGCCGATAATAGGAA+TGG 0.613412 7_3:-78857200 None:intergenic
TGCTACGGAGAACTCAAGCT+GGG 0.613517 7_3:+78856359 Msa1127290:CDS
TTCTTTGGAAATCTTCCACA+AGG 0.616835 7_3:-78854936 None:intergenic
AGAAACCTTTGGTTCCTGGT+GGG 0.619335 7_3:+78854670 Msa1127290:CDS
AACCATTCCTATTATCGGCG+AGG 0.620784 7_3:+78857198 Msa1127290:CDS
CTCTGCCAAGGTCATCATTG+TGG 0.622722 7_3:+78858543 Msa1127290:CDS
ATGTCAAACAGATCAAGGAA+TGG 0.625170 7_3:-78856472 None:intergenic
GTAGAGTTATGGAGTGCCGA+TGG 0.625317 7_3:+78854960 Msa1127290:CDS
AAAGCGGGAGGTGGACATGG+AGG 0.626615 7_3:-78853320 None:intergenic
CTCCACTGACTGAATTAGCA+AGG 0.626819 7_3:+78854253 Msa1127290:CDS
ATCGTAGAAAGTATCGGCGG+TGG 0.627429 7_3:-78853422 None:intergenic
TCTGCAAAGATGCAAGCTGA+GGG 0.627483 7_3:-78856796 None:intergenic
GCCATCTACCTGTTTCCCAA+AGG 0.629718 7_3:-78858352 None:intergenic
GACCAAACCAAACATGGCAA+AGG 0.629767 7_3:-78856908 None:intergenic
ACTGCTGTCTCCACTGAAGA+CGG 0.630271 7_3:+78853361 Msa1127290:CDS
TATTGCAAAGATAAAGAAAG+GGG 0.630329 7_3:+78856390 Msa1127290:CDS
TGCCGATGGAAAATTTGTCA+GGG 0.632234 7_3:+78854974 Msa1127290:CDS
GGTTACCACAATGATGACCT+TGG 0.633949 7_3:-78858548 None:intergenic
AATGACAATGCAGGAACTGG+CGG 0.634984 7_3:-78854183 None:intergenic
ACGAATCTTGGTATAAAACA+AGG 0.635100 7_3:+78856233 Msa1127290:CDS
GGCTAAAGTAAGACTCCAAG+GGG 0.635112 7_3:-78858184 None:intergenic
GCTACATTATACTTGCCACC+TGG 0.635485 7_3:+78856863 Msa1127290:CDS
GAGGTGCTAAATGGCGAAAG+CGG 0.635693 7_3:-78853336 None:intergenic
GATCGATCGAATAGGATGCG+TGG 0.639019 7_3:-78856301 None:intergenic
GGGTTGCAGATGTGGAAACA+GGG 0.639948 7_3:+78854523 Msa1127290:CDS
TCAGTGGAGACAGCAGTGAG+AGG 0.642945 7_3:-78853355 None:intergenic
AGCTCCACGAGTTGATGGAA+TGG 0.642993 7_3:-78854640 None:intergenic
AATAAAAGCTTACCCCACGC+CGG 0.643004 7_3:-78857543 None:intergenic
GATACTTTCTACGATTACGA+AGG 0.643647 7_3:+78853430 Msa1127290:CDS
GGATACACAAACTATACCAT+CGG 0.646424 7_3:+78853179 Msa1127290:CDS
AAGCCATGGCTATTCTGCCA+GGG 0.646990 7_3:+78858313 Msa1127290:CDS
GGTAGTACCTGAAAACCGAA+AGG 0.650995 7_3:-78857780 None:intergenic
GAAGTGGTGCAACACCAGAA+GGG 0.651059 7_3:+78856443 Msa1127290:CDS
CGACGGAGAGTGAGGAAACG+CGG 0.652672 7_3:-78853277 None:intergenic
ACGATGTCCCTGATCACAGG+TGG 0.652850 7_3:-78854153 None:intergenic
TGATGGTACACTAGGACCTG+AGG 0.655303 7_3:+78854374 Msa1127290:CDS
CAGCATTCGTGTGAATGAGG+AGG 0.655496 7_3:+78854473 Msa1127290:CDS
GGACCTGAGGTTGAGATACA+CGG 0.656503 7_3:+78854387 Msa1127290:CDS
AACAAGGCGAATAAGAACAT+GGG 0.658049 7_3:+78856249 Msa1127290:CDS
AGTCGCATGTCATTCTACAC+CGG 0.658779 7_3:+78854327 Msa1127290:CDS
GCCTATCTTGCTTATCCATG+GGG 0.662327 7_3:+78858049 Msa1127290:CDS
CAGGTATCAAAGAAAAGACG+GGG 0.665680 7_3:+78856829 Msa1127290:CDS
CAATTACATCCAATAGTGTG+CGG 0.671738 7_3:+78855030 Msa1127290:CDS
TCTGTTGATGGATTGTAACC+AGG 0.671747 7_3:-78856881 None:intergenic
AGAGAGGTATAAACAGCTGG+AGG 0.671888 7_3:-78854846 None:intergenic
CTTGCTAATTCAGTCAGTGG+AGG 0.677968 7_3:-78854252 None:intergenic
GGAAGAAGTTATCCGGCGTG+GGG 0.679866 7_3:+78857531 Msa1127290:CDS
AGATGCTAAAACAAGCTGAG+AGG 0.680936 7_3:-78854796 None:intergenic
GGTTACAATCCATCAACAGA+CGG 0.682155 7_3:+78856884 Msa1127290:CDS
TGCAGATGCTGAAAGCAAAG+TGG 0.682448 7_3:+78858460 Msa1127290:CDS
GACTGAATTAGCAAGGCCGG+AGG 0.685598 7_3:+78854260 Msa1127290:CDS
CGGAGAGTGAGGAAACGCGG+AGG 0.690767 7_3:-78853274 None:intergenic
TGAAGACAGAACTCTTTGGG+AGG 0.699548 7_3:+78857971 Msa1127290:CDS
ATTCTGCCTTATGAAAGCCA+TGG 0.703288 7_3:+78858299 Msa1127290:CDS
TCTAGGGTAGAAACTCAAGA+CGG 0.706858 7_3:+78855743 Msa1127290:intron
ATTGCAAAGATAAAGAAAGG+GGG 0.711082 7_3:+78856391 Msa1127290:CDS
ATCTGGAGAAGGGTCCAGAG+AGG 0.721369 7_3:-78854862 None:intergenic
AGGGTAGAAACTCAAGACGG+AGG 0.724058 7_3:+78855746 Msa1127290:intron
TGTGAGTAGATTATATCACG+AGG 0.743851 7_3:-78855791 None:intergenic
GTTGATGGATTGTAACCAGG+TGG 0.752017 7_3:-78856878 None:intergenic
GTAATCGTAGAAAGTATCGG+CGG 0.776533 7_3:-78853425 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATATAAATTAAAAACT+TGG - chr7_3:78855117-78855136 None:intergenic 10.0%
!!! TTTTAATTTATATTTCTTCT+TGG + chr7_3:78855120-78855139 Msa1127290:intron 10.0%
!!! TTTAATTTATATTTCTTCTT+GGG + chr7_3:78855121-78855140 Msa1127290:intron 10.0%
!!! AAAATAATTTTGTCTCTAAA+TGG - chr7_3:78854213-78854232 None:intergenic 15.0%
!! CAAAAAAATATAAAAATGCA+AGG - chr7_3:78855658-78855677 None:intergenic 15.0%
!! CCAACTAATAAAATTATATT+GGG - chr7_3:78856732-78856751 None:intergenic 15.0%
!!! ATATTTTGTATTAAATTAGC+TGG + chr7_3:78857125-78857144 Msa1127290:intron 15.0%
!! AAAATTGAGTTTCAAATATT+TGG + chr7_3:78857353-78857372 Msa1127290:intron 15.0%
!! TAATAGCTGATTATTAATTA+TGG - chr7_3:78857447-78857466 None:intergenic 15.0%
!!! ATTTCTAAAAGACATTTATA+AGG - chr7_3:78857912-78857931 None:intergenic 15.0%
!!! AATTTTATCAATCAATGATG+CGG + chr7_3:78853158-78853177 Msa1127290:exon 20.0%
!! TGATGTAGTATTTGATTAAT+TGG + chr7_3:78853722-78853741 Msa1127290:intron 20.0%
!!! AGTTTTTGAAAACTATGTTT+GGG + chr7_3:78854590-78854609 Msa1127290:CDS 20.0%
!! TTCATTATTAAAACACTCTT+GGG - chr7_3:78855321-78855340 None:intergenic 20.0%
!!! TTTTAAAATTGCTTCATTTG+AGG + chr7_3:78855718-78855737 Msa1127290:intron 20.0%
!! TAGCATAGAATATTTGAAAA+TGG - chr7_3:78855998-78856017 None:intergenic 20.0%
!! ATTATTGCAAAGATAAAGAA+AGG + chr7_3:78856388-78856407 Msa1127290:CDS 20.0%
!! TTATTGCAAAGATAAAGAAA+GGG + chr7_3:78856389-78856408 Msa1127290:CDS 20.0%
!!! TGTCTTAAATCACTTTTTTT+CGG + chr7_3:78856500-78856519 Msa1127290:intron 20.0%
!!! CCCAATATAATTTTATTAGT+TGG + chr7_3:78856729-78856748 Msa1127290:CDS 20.0%
!! GCCAACTAATAAAATTATAT+TGG - chr7_3:78856733-78856752 None:intergenic 20.0%
!!! ACCTGAATTATTTTTTTATC+TGG - chr7_3:78856755-78856774 None:intergenic 20.0%
!! TAATACAAAATATACTGAAC+CGG - chr7_3:78857118-78857137 None:intergenic 20.0%
!! AATAGAAATTGAACTATCAT+AGG - chr7_3:78857804-78857823 None:intergenic 20.0%
!! TTCAATTTCTATTATTCCAA+TGG + chr7_3:78857811-78857830 Msa1127290:intron 20.0%
!!! TTGTTGACTTTTTAGTTACA+TGG - chr7_3:78853628-78853647 None:intergenic 25.0%
! TACACTGTAAGTAAAAACAA+AGG - chr7_3:78853759-78853778 None:intergenic 25.0%
! TTTATGAAAATAAGCTGAAC+AGG + chr7_3:78853842-78853861 Msa1127290:intron 25.0%
! TACTAAATCTAAAAACTGCA+AGG - chr7_3:78853992-78854011 None:intergenic 25.0%
!!! ATTTAGTATTTTTGAGCTTC+TGG + chr7_3:78854004-78854023 Msa1127290:intron 25.0%
!! CGAAGATAAATTTTGTTACT+TGG + chr7_3:78854424-78854443 Msa1127290:CDS 25.0%
!!! CAGTTTTTGAAAACTATGTT+TGG + chr7_3:78854589-78854608 Msa1127290:CDS 25.0%
!! TGCTCATTAGATTGAATTTT+TGG - chr7_3:78854696-78854715 None:intergenic 25.0%
!! TTATGATTGATTCAATGCAT+AGG + chr7_3:78854895-78854914 Msa1127290:CDS 25.0%
! CTTCATTATTAAAACACTCT+TGG - chr7_3:78855322-78855341 None:intergenic 25.0%
!!! GTTTTAATAATGAAGTTCAC+TGG + chr7_3:78855327-78855346 Msa1127290:intron 25.0%
!! AGTTTTTATGAGCAATCATT+CGG + chr7_3:78855373-78855392 Msa1127290:intron 25.0%
! TTTCATGGAATATTATGGTT+AGG + chr7_3:78855452-78855471 Msa1127290:intron 25.0%
!!! AGAATAAGCTGTTTTAGAAA+AGG - chr7_3:78855902-78855921 None:intergenic 25.0%
! TATTGCAAAGATAAAGAAAG+GGG + chr7_3:78856390-78856409 Msa1127290:CDS 25.0%
! GGAAGATATATTATACTGAA+TGG + chr7_3:78856421-78856440 Msa1127290:CDS 25.0%
! TATATTATACTGAATGGAAG+TGG + chr7_3:78856427-78856446 Msa1127290:CDS 25.0%
! GCCAGATAAAAAAATAATTC+AGG + chr7_3:78856751-78856770 Msa1127290:CDS 25.0%
!!! ACTCAATTTTGAAGAGAAAT+GGG - chr7_3:78857343-78857362 None:intergenic 25.0%
!!! AACTCAATTTTGAAGAGAAA+TGG - chr7_3:78857344-78857363 None:intergenic 25.0%
!!! AGTTTGAATCGAACATTTTT+TGG + chr7_3:78857609-78857628 Msa1127290:intron 25.0%
!! ATTTTATTAGCCGACATAAA+AGG - chr7_3:78858023-78858042 None:intergenic 25.0%
! GTCAAAGAAAATATTAGCAA+AGG + chr7_3:78858434-78858453 Msa1127290:CDS 25.0%
! TTCGTAATCGTAGAAAGTAT+CGG - chr7_3:78853431-78853450 None:intergenic 30.0%
TGCAATAAACAGTTAACTAG+CGG - chr7_3:78853479-78853498 None:intergenic 30.0%
! GTATAGTATTTTCCATTTCG+CGG + chr7_3:78853527-78853546 Msa1127290:intron 30.0%
TCAAATAAGCTTATCCAAAC+TGG + chr7_3:78853938-78853957 Msa1127290:intron 30.0%
! CTAACAGCTACTTTAATGTT+TGG + chr7_3:78854043-78854062 Msa1127290:intron 30.0%
ATGTTAGATGATTCAGCTTT+AGG + chr7_3:78854111-78854130 Msa1127290:intron 30.0%
ATACTAGTAAACTCAGAGTA+TGG + chr7_3:78854502-78854521 Msa1127290:CDS 30.0%
TACTAGTAAACTCAGAGTAT+GGG + chr7_3:78854503-78854522 Msa1127290:CDS 30.0%
ACTGCATTCAAATATACATC+AGG - chr7_3:78854573-78854592 None:intergenic 30.0%
TATTCAAGTAAGAACATTCC+AGG + chr7_3:78854725-78854744 Msa1127290:CDS 30.0%
!!! CTTGTTTTAGCATCTTTAGA+TGG + chr7_3:78854804-78854823 Msa1127290:CDS 30.0%
ATCTTTAGATGGTACTACAA+AGG + chr7_3:78854815-78854834 Msa1127290:CDS 30.0%
ATCATAATGTACTTCTCATC+TGG - chr7_3:78854882-78854901 None:intergenic 30.0%
CAAGGTACAATAAAAGAGTA+TGG - chr7_3:78854921-78854940 None:intergenic 30.0%
! TACTCTTTTATTGTACCTTG+TGG + chr7_3:78854921-78854940 Msa1127290:CDS 30.0%
! GTTTTTATGAGCAATCATTC+GGG + chr7_3:78855374-78855393 Msa1127290:intron 30.0%
!! GCTGTTTTCATGGAATATTA+TGG + chr7_3:78855447-78855466 Msa1127290:intron 30.0%
! TTACCATTCTTTTCTTCGAT+TGG + chr7_3:78855507-78855526 Msa1127290:intron 30.0%
! TCATTTTCTTCCCTCTTTTA+TGG + chr7_3:78855534-78855553 Msa1127290:intron 30.0%
CAAAAACTGACCATAAAAGA+GGG - chr7_3:78855547-78855566 None:intergenic 30.0%
ATTTGAAAATGGTCAAGACT+TGG - chr7_3:78855987-78856006 None:intergenic 30.0%
ATGATGATCAAGCATGTAAA+TGG - chr7_3:78856043-78856062 None:intergenic 30.0%
ACGAATCTTGGTATAAAACA+AGG + chr7_3:78856233-78856252 Msa1127290:CDS 30.0%
ATTGCAAAGATAAAGAAAGG+GGG + chr7_3:78856391-78856410 Msa1127290:CDS 30.0%
GTATAAATGAAAATCTGCGA+GGG - chr7_3:78856532-78856551 None:intergenic 30.0%
AGTATAAATGAAAATCTGCG+AGG - chr7_3:78856533-78856552 None:intergenic 30.0%
! GCAGATTTTCATTTATACTC+TGG + chr7_3:78856534-78856553 Msa1127290:intron 30.0%
! GATTTTCATTTATACTCTGG+TGG + chr7_3:78856537-78856556 Msa1127290:intron 30.0%
AAGGAGATTTACAGTTAGAT+AGG + chr7_3:78856666-78856685 Msa1127290:CDS 30.0%
ATCAGGTATCAAAGAAAAGA+CGG + chr7_3:78856827-78856846 Msa1127290:CDS 30.0%
TTCCACAACAAAAAAGATGA+GGG - chr7_3:78857725-78857744 None:intergenic 30.0%
ATTCCACAACAAAAAAGATG+AGG - chr7_3:78857726-78857745 None:intergenic 30.0%
AGAAAATTTATGGAAGCCAT+TGG - chr7_3:78857830-78857849 None:intergenic 30.0%
GTGAAGCACAAGAAAATTTA+TGG - chr7_3:78857840-78857859 None:intergenic 30.0%
ATCCAAAAATAAGGTGTGAA+AGG - chr7_3:78857878-78857897 None:intergenic 30.0%
CTTCATTCTACAGAAGAAAA+TGG - chr7_3:78857956-78857975 None:intergenic 30.0%
TGACTATTGCAGTATTTGAA+AGG + chr7_3:78858155-78858174 Msa1127290:intron 30.0%
GACTATTGCAGTATTTGAAA+GGG + chr7_3:78858156-78858175 Msa1127290:intron 30.0%
GGATACACAAACTATACCAT+CGG + chr7_3:78853179-78853198 Msa1127290:CDS 35.0%
! ATGATGGTGAAGAAAAAGAG+AGG - chr7_3:78853219-78853238 None:intergenic 35.0%
GATACTTTCTACGATTACGA+AGG + chr7_3:78853430-78853449 Msa1127290:CDS 35.0%
AAAATAAGCTGAACAGGTCA+TGG + chr7_3:78853848-78853867 Msa1127290:intron 35.0%
CTTGAGCACATAAAGACTAA+GGG - chr7_3:78853964-78853983 None:intergenic 35.0%
!! ATGATTCAGCTTTAGGAGTA+GGG + chr7_3:78854118-78854137 Msa1127290:CDS 35.0%
AATGGTGAAAATGACAATGC+AGG - chr7_3:78854195-78854214 None:intergenic 35.0%
! TTGATGGATACTGCAATTCA+AGG + chr7_3:78854304-78854323 Msa1127290:CDS 35.0%
AATTTCATGGATCCCTAAAC+CGG - chr7_3:78854349-78854368 None:intergenic 35.0%
ATCCATGAAATTCTTCCTGA+TGG + chr7_3:78854357-78854376 Msa1127290:CDS 35.0%
TACCATCAGGAAGAATTTCA+TGG - chr7_3:78854362-78854381 None:intergenic 35.0%
AATTTATCTTCGCACCTTCA+GGG - chr7_3:78854416-78854435 None:intergenic 35.0%
AAATTTATCTTCGCACCTTC+AGG - chr7_3:78854417-78854436 None:intergenic 35.0%
! GATGGTACTACAAAGGATTT+TGG + chr7_3:78854822-78854841 Msa1127290:CDS 35.0%
! TTCTTTGGAAATCTTCCACA+AGG - chr7_3:78854939-78854958 None:intergenic 35.0%
TTGTGGAAGATTTCCAAAGA+AGG + chr7_3:78854938-78854957 Msa1127290:CDS 35.0%
TTCCAAAGAAGGTAGAGTTA+TGG + chr7_3:78854949-78854968 Msa1127290:CDS 35.0%
GGATGTAATTGGAATGTCTT+CGG - chr7_3:78855021-78855040 None:intergenic 35.0%
CAATTACATCCAATAGTGTG+CGG + chr7_3:78855030-78855049 Msa1127290:CDS 35.0%
AAGGGATGCGTTCTATTAAT+TGG + chr7_3:78855054-78855073 Msa1127290:CDS 35.0%
ATGTATCCATACGCAAGATT+TGG + chr7_3:78855422-78855441 Msa1127290:intron 35.0%
TGTATCCATACGCAAGATTT+GGG + chr7_3:78855423-78855442 Msa1127290:intron 35.0%
AAGCCAATCGAAGAAAAGAA+TGG - chr7_3:78855513-78855532 None:intergenic 35.0%
CCAAAAACTGACCATAAAAG+AGG - chr7_3:78855548-78855567 None:intergenic 35.0%
! CCTCTTTTATGGTCAGTTTT+TGG + chr7_3:78855545-78855564 Msa1127290:intron 35.0%
TGTGAGTAGATTATATCACG+AGG - chr7_3:78855794-78855813 None:intergenic 35.0%
TCAAGCTTGTGTAATATCAC+CGG - chr7_3:78855845-78855864 None:intergenic 35.0%
TGGGTATGGATACAAATTCT+CGG + chr7_3:78855874-78855893 Msa1127290:intron 35.0%
TGATCATCATGACCAACAAT+TGG + chr7_3:78856053-78856072 Msa1127290:intron 35.0%
TATATAGCTCCTGTTAGGAT+AGG + chr7_3:78856126-78856145 Msa1127290:intron 35.0%
ATATAGCTCCTGTTAGGATA+GGG + chr7_3:78856127-78856146 Msa1127290:intron 35.0%
!! CTTGTTTTCTGTATCTACAG+AGG + chr7_3:78856175-78856194 Msa1127290:intron 35.0%
GTATCTACAGAGGAATTTCT+TGG + chr7_3:78856185-78856204 Msa1127290:intron 35.0%
! TGGCTTTTGTATACGAATCT+TGG + chr7_3:78856221-78856240 Msa1127290:CDS 35.0%
AAACAAGGCGAATAAGAACA+TGG + chr7_3:78856248-78856267 Msa1127290:CDS 35.0%
AACAAGGCGAATAAGAACAT+GGG + chr7_3:78856249-78856268 Msa1127290:CDS 35.0%
ATGTCAAACAGATCAAGGAA+TGG - chr7_3:78856475-78856494 None:intergenic 35.0%
CTTACATGTCAAACAGATCA+AGG - chr7_3:78856480-78856499 None:intergenic 35.0%
TCATTTATACTCTGGTGGTT+TGG + chr7_3:78856542-78856561 Msa1127290:intron 35.0%
!! CCTGTATTTCTGCAACATTT+TGG - chr7_3:78856569-78856588 None:intergenic 35.0%
CCAAAATGTTGCAGAAATAC+AGG + chr7_3:78856566-78856585 Msa1127290:intron 35.0%
TTGCAGAAATACAGGTAGTA+AGG + chr7_3:78856574-78856593 Msa1127290:intron 35.0%
TCAGGTATCAAAGAAAAGAC+GGG + chr7_3:78856828-78856847 Msa1127290:CDS 35.0%
CTTTGCTCTTAAATTCTCCA+GGG - chr7_3:78856937-78856956 None:intergenic 35.0%
TCTTTGCTCTTAAATTCTCC+AGG - chr7_3:78856938-78856957 None:intergenic 35.0%
!! CTGTTTGGCTCTAGATAATT+AGG + chr7_3:78857067-78857086 Msa1127290:intron 35.0%
TTTACTTAGTTCCTCTGTTC+CGG + chr7_3:78857096-78857115 Msa1127290:intron 35.0%
! TTGATGACTTTAAGTAGTGC+AGG + chr7_3:78857155-78857174 Msa1127290:intron 35.0%
GAAGATAAGGAGATTTCTCT+CGG - chr7_3:78857317-78857336 None:intergenic 35.0%
AACTAATTGCTCTACATAGC+TGG - chr7_3:78857491-78857510 None:intergenic 35.0%
CATCCAAAGAAAATAGCTGT+TGG + chr7_3:78857651-78857670 Msa1127290:CDS 35.0%
TCCACAACAAAAAAGATGAG+GGG - chr7_3:78857724-78857743 None:intergenic 35.0%
AGGTGTGAAAGGAGATTAAA+AGG - chr7_3:78857867-78857886 None:intergenic 35.0%
!!! CTCCTTTCACACCTTATTTT+TGG + chr7_3:78857873-78857892 Msa1127290:intron 35.0%
!!! CACCTTATTTTTGGATTGAC+TGG + chr7_3:78857882-78857901 Msa1127290:intron 35.0%
TGCCAGTCAATCCAAAAATA+AGG - chr7_3:78857887-78857906 None:intergenic 35.0%
AGAATGAAGACAGAACTCTT+TGG + chr7_3:78857967-78857986 Msa1127290:intron 35.0%
GAATGAAGACAGAACTCTTT+GGG + chr7_3:78857968-78857987 Msa1127290:intron 35.0%
CATCTCTACATAAGTATCAG+TGG - chr7_3:78857997-78858016 None:intergenic 35.0%
! AGAGATGAGTCCTTTTATGT+CGG + chr7_3:78858010-78858029 Msa1127290:CDS 35.0%
ATTTACAAGAACAGTAGACG+TGG - chr7_3:78858125-78858144 None:intergenic 35.0%
!! AGGTTTTTCAATGCTCTGAA+GGG + chr7_3:78858251-78858270 Msa1127290:CDS 35.0%
TGAAGAAAAAGAGAGGAGAG+TGG - chr7_3:78853212-78853231 None:intergenic 40.0%
!! GTAATCGTAGAAAGTATCGG+CGG - chr7_3:78853428-78853447 None:intergenic 40.0%
ATAAAGACTAAGGGCCAGTT+TGG - chr7_3:78853955-78853974 None:intergenic 40.0%
CCTTGAGCACATAAAGACTA+AGG - chr7_3:78853965-78853984 None:intergenic 40.0%
! CCTTAGTCTTTATGTGCTCA+AGG + chr7_3:78853962-78853981 Msa1127290:intron 40.0%
!! GATGATTCAGCTTTAGGAGT+AGG + chr7_3:78854117-78854136 Msa1127290:intron 40.0%
GAAAATGACAATGCAGGAAC+TGG - chr7_3:78854189-78854208 None:intergenic 40.0%
!! TTGGCTGGTTTACGTATTGA+TGG + chr7_3:78854288-78854307 Msa1127290:CDS 40.0%
!! ATGTCATTCTACACCGGTTT+AGG + chr7_3:78854333-78854352 Msa1127290:CDS 40.0%
!! TGTCATTCTACACCGGTTTA+GGG + chr7_3:78854334-78854353 Msa1127290:CDS 40.0%
ATTCTTCCTGATGGTACACT+AGG + chr7_3:78854366-78854385 Msa1127290:CDS 40.0%
AAGGATAAATGTCGAGCATC+AGG - chr7_3:78854453-78854472 None:intergenic 40.0%
!! AACATTCCAGGATTTGCTGA+AGG + chr7_3:78854737-78854756 Msa1127290:CDS 40.0%
ATTCATCCTTCAGCAAATCC+TGG - chr7_3:78854746-78854765 None:intergenic 40.0%
AGATGCTAAAACAAGCTGAG+AGG - chr7_3:78854799-78854818 None:intergenic 40.0%
TGTACTTCTCATCTGGAGAA+GGG - chr7_3:78854875-78854894 None:intergenic 40.0%
ATGTACTTCTCATCTGGAGA+AGG - chr7_3:78854876-78854895 None:intergenic 40.0%
CTCCATAACTCTACCTTCTT+TGG - chr7_3:78854954-78854973 None:intergenic 40.0%
TGCCGATGGAAAATTTGTCA+GGG + chr7_3:78854974-78854993 Msa1127290:CDS 40.0%
! CTCCCTGACAAATTTTCCAT+CGG - chr7_3:78854979-78854998 None:intergenic 40.0%
AATTGGAATGTCTTCGGCAA+GGG - chr7_3:78855015-78855034 None:intergenic 40.0%
TAATTGGAATGTCTTCGGCA+AGG - chr7_3:78855016-78855035 None:intergenic 40.0%
CGCACACTATTGGATGTAAT+TGG - chr7_3:78855032-78855051 None:intergenic 40.0%
ATAAGCCATCAACGCTTTAC+TGG + chr7_3:78855084-78855103 Msa1127290:CDS 40.0%
!! CTATACCAGTAAAGCGTTGA+TGG - chr7_3:78855092-78855111 None:intergenic 40.0%
TTCTTCTTGGGCATGTACTT+TGG + chr7_3:78855133-78855152 Msa1127290:intron 40.0%
GTATCCATACGCAAGATTTG+GGG + chr7_3:78855424-78855443 Msa1127290:intron 40.0%
TATCCATACGCAAGATTTGG+GGG + chr7_3:78855425-78855444 Msa1127290:intron 40.0%
GTGAAATTTGCAAGCCAATG+TGG + chr7_3:78855479-78855498 Msa1127290:intron 40.0%
GAATGGTAAGTGATCCACAT+TGG - chr7_3:78855496-78855515 None:intergenic 40.0%
! TTGCTTCATTTGAGGTCTCT+AGG + chr7_3:78855726-78855745 Msa1127290:intron 40.0%
! TGCTTCATTTGAGGTCTCTA+GGG + chr7_3:78855727-78855746 Msa1127290:intron 40.0%
! TCTAGGGTAGAAACTCAAGA+CGG + chr7_3:78855743-78855762 Msa1127290:intron 40.0%
ACAAGCTTGATCTTCGCTAT+GGG + chr7_3:78855855-78855874 Msa1127290:CDS 40.0%
ACAATGTCAACTGCAAACCT+CGG - chr7_3:78855954-78855973 None:intergenic 40.0%
TGAGCATGCAAACCAATTGT+TGG - chr7_3:78856068-78856087 None:intergenic 40.0%
AGGAGCTATATAGATGCTCA+TGG - chr7_3:78856118-78856137 None:intergenic 40.0%
GCATCTATATAGCTCCTGTT+AGG + chr7_3:78856121-78856140 Msa1127290:intron 40.0%
! TTCTTGGTGTGATGATTCAC+TGG + chr7_3:78856201-78856220 Msa1127290:CDS 40.0%
! CTTCTGAAGATCGATCGAAT+AGG - chr7_3:78856312-78856331 None:intergenic 40.0%
GAAGATGTATACTCTGATCC+TGG + chr7_3:78856328-78856347 Msa1127290:CDS 40.0%
AGGTAGTAAGGAACGAATCT+GGG + chr7_3:78856586-78856605 Msa1127290:CDS 40.0%
GTCTGTTGTTGCTCTAATGT+CGG + chr7_3:78856634-78856653 Msa1127290:CDS 40.0%
CTAATGTCGGATCAAGAAGA+AGG + chr7_3:78856647-78856666 Msa1127290:CDS 40.0%
CTTTGCAGAAAGAGATGATC+AGG + chr7_3:78856810-78856829 Msa1127290:CDS 40.0%
CAGGTATCAAAGAAAAGACG+GGG + chr7_3:78856829-78856848 Msa1127290:CDS 40.0%
!! TCTGTTGATGGATTGTAACC+AGG - chr7_3:78856884-78856903 None:intergenic 40.0%
GGTTACAATCCATCAACAGA+CGG + chr7_3:78856884-78856903 Msa1127290:CDS 40.0%
GCTCTCCAAATGAATTTGCA+GGG + chr7_3:78856978-78856997 Msa1127290:CDS 40.0%
CCAATCCCTGCAAATTCATT+TGG - chr7_3:78856986-78857005 None:intergenic 40.0%
CCAAATGAATTTGCAGGGAT+TGG + chr7_3:78856983-78857002 Msa1127290:CDS 40.0%
TGACAATTATCTGCGCTGTT+TGG + chr7_3:78857052-78857071 Msa1127290:intron 40.0%
AATATACTGAACCGGAACAG+AGG - chr7_3:78857110-78857129 None:intergenic 40.0%
GTGAAGTAGAGGCTAATGAT+AGG + chr7_3:78857221-78857240 Msa1127290:CDS 40.0%
GAGAAATGGGACTGAAGATA+AGG - chr7_3:78857330-78857349 None:intergenic 40.0%
!! TTGGTCTCTTCACTTTTGTG+AGG + chr7_3:78857372-78857391 Msa1127290:intron 40.0%
!! TCTTCACTTTTGTGAGGCTT+AGG + chr7_3:78857378-78857397 Msa1127290:intron 40.0%
TGAGGCTTAGGTTTCTTCTT+CGG + chr7_3:78857390-78857409 Msa1127290:intron 40.0%
!!! ATTTTTTGGCTGTCCCATCT+AGG + chr7_3:78857623-78857642 Msa1127290:intron 40.0%
TTTGGATGAGCTACCTAGAT+GGG - chr7_3:78857639-78857658 None:intergenic 40.0%
!! CCACCAACAGCTATTTTCTT+TGG - chr7_3:78857657-78857676 None:intergenic 40.0%
CCAAAGAAAATAGCTGTTGG+TGG + chr7_3:78857654-78857673 Msa1127290:CDS 40.0%
AACAGAACCCTTACTCCTTT+CGG + chr7_3:78857765-78857784 Msa1127290:CDS 40.0%
CTGAAAACCGAAAGGAGTAA+GGG - chr7_3:78857775-78857794 None:intergenic 40.0%
AAGCCTATCTTGCTTATCCA+TGG + chr7_3:78858047-78858066 Msa1127290:CDS 40.0%
AGCCTATCTTGCTTATCCAT+GGG + chr7_3:78858048-78858067 Msa1127290:CDS 40.0%
GATTATTATCCTCTTCCCCA+TGG - chr7_3:78858067-78858086 None:intergenic 40.0%
ATTAACCATGCAGGTAAGAG+AGG + chr7_3:78858094-78858113 Msa1127290:intron 40.0%
AAATTCCTCTCTTACCTGCA+TGG - chr7_3:78858102-78858121 None:intergenic 40.0%
TTTGAAAGGGATAATCCCCT+TGG + chr7_3:78858169-78858188 Msa1127290:CDS 40.0%
TGGCTAAAGTAAGACTCCAA+GGG - chr7_3:78858188-78858207 None:intergenic 40.0%
TTGGCTAAAGTAAGACTCCA+AGG - chr7_3:78858189-78858208 None:intergenic 40.0%
GAATAGAAGCAGCAAGCAAT+TGG - chr7_3:78858208-78858227 None:intergenic 40.0%
!! CAGGTTTTTCAATGCTCTGA+AGG + chr7_3:78858250-78858269 Msa1127290:CDS 40.0%
ATTCTGCCTTATGAAAGCCA+TGG + chr7_3:78858299-78858318 Msa1127290:CDS 40.0%
GAATAGCCATGGCTTTCATA+AGG - chr7_3:78858308-78858327 None:intergenic 40.0%
! AAAGCATCATGCATGTCCTT+TGG + chr7_3:78858336-78858355 Msa1127290:CDS 40.0%
AAGCATCATGCATGTCCTTT+GGG + chr7_3:78858337-78858356 Msa1127290:CDS 40.0%
ATCATGATCTTCACCTGCAT+CGG - chr7_3:78858405-78858424 None:intergenic 40.0%
AAGAATCTCATTCTCTGCCA+AGG + chr7_3:78858531-78858550 Msa1127290:CDS 40.0%
GAAGAAGAGAAGGGTTGGAA+GGG - chr7_3:78853246-78853265 None:intergenic 45.0%
AGCAGAAATCAACCGCGAAA+TGG - chr7_3:78853542-78853561 None:intergenic 45.0%
! CCTTCGAGTACAGACTTTTC+AGG - chr7_3:78853816-78853835 None:intergenic 45.0%
CCTGAAAAGTCTGTACTCGA+AGG + chr7_3:78853813-78853832 Msa1127290:intron 45.0%
AATGACAATGCAGGAACTGG+CGG - chr7_3:78854186-78854205 None:intergenic 45.0%
CTTGCTAATTCAGTCAGTGG+AGG - chr7_3:78854255-78854274 None:intergenic 45.0%
! CTCCACTGACTGAATTAGCA+AGG + chr7_3:78854253-78854272 Msa1127290:CDS 45.0%
ACTGACTGAATTAGCAAGGC+CGG + chr7_3:78854257-78854276 Msa1127290:CDS 45.0%
! AAACCAGCCAACTTTTCCTC+CGG - chr7_3:78854279-78854298 None:intergenic 45.0%
AGTCGCATGTCATTCTACAC+CGG + chr7_3:78854327-78854346 Msa1127290:CDS 45.0%
TAACCGTGTATCTCAACCTC+AGG - chr7_3:78854393-78854412 None:intergenic 45.0%
CTCATTCACACGAATGCTGA+AGG - chr7_3:78854472-78854491 None:intergenic 45.0%
CTTCAGCATTCGTGTGAATG+AGG + chr7_3:78854470-78854489 Msa1127290:CDS 45.0%
ACATCAGGCGACTGAAACAA+AGG - chr7_3:78854558-78854577 None:intergenic 45.0%
AGCTCCACCAAAGAAACCTT+TGG + chr7_3:78854659-78854678 Msa1127290:CDS 45.0%
GGAACCAAAGGTTTCTTTGG+TGG - chr7_3:78854666-78854685 None:intergenic 45.0%
CCAGGAACCAAAGGTTTCTT+TGG - chr7_3:78854669-78854688 None:intergenic 45.0%
! CCAAAGAAACCTTTGGTTCC+TGG + chr7_3:78854666-78854685 Msa1127290:CDS 45.0%
! AAGAAACCTTTGGTTCCTGG+TGG + chr7_3:78854669-78854688 Msa1127290:CDS 45.0%
! AGAAACCTTTGGTTCCTGGT+GGG + chr7_3:78854670-78854689 Msa1127290:CDS 45.0%
!!! GATTGAATTTTTGGCCCACC+AGG - chr7_3:78854687-78854706 None:intergenic 45.0%
! AGAGAGGTATAAACAGCTGG+AGG - chr7_3:78854849-78854868 None:intergenic 45.0%
TCCAGCTGTTTATACCTCTC+TGG + chr7_3:78854848-78854867 Msa1127290:CDS 45.0%
! TCCAGAGAGGTATAAACAGC+TGG - chr7_3:78854852-78854871 None:intergenic 45.0%
! GTGCCGATGGAAAATTTGTC+AGG + chr7_3:78854973-78854992 Msa1127290:CDS 45.0%
ATTGGAATGTCTTCGGCAAG+GGG - chr7_3:78855014-78855033 None:intergenic 45.0%
ACATCCAATAGTGTGCGGAA+AGG + chr7_3:78855035-78855054 Msa1127290:CDS 45.0%
CATCCAATAGTGTGCGGAAA+GGG + chr7_3:78855036-78855055 Msa1127290:CDS 45.0%
!! AGATTTGGGGGCTGTTTTCA+TGG + chr7_3:78855437-78855456 Msa1127290:intron 45.0%
CACAAGCTTGATCTTCGCTA+TGG + chr7_3:78855854-78855873 Msa1127290:CDS 45.0%
CTTGATCTTCGCTATGGGTA+TGG + chr7_3:78855860-78855879 Msa1127290:intron 45.0%
ATAAAGAAAGGGGGCGATGA+AGG + chr7_3:78856400-78856419 Msa1127290:CDS 45.0%
CAGGTAGTAAGGAACGAATC+TGG + chr7_3:78856585-78856604 Msa1127290:CDS 45.0%
ACGAATCTGGGAGAGTGATA+AGG + chr7_3:78856598-78856617 Msa1127290:CDS 45.0%
AAAGATGCAAGCTGAGGGTA+TGG - chr7_3:78856794-78856813 None:intergenic 45.0%
TCTGCAAAGATGCAAGCTGA+GGG - chr7_3:78856799-78856818 None:intergenic 45.0%
TTCTGCAAAGATGCAAGCTG+AGG - chr7_3:78856800-78856819 None:intergenic 45.0%
GCTACATTATACTTGCCACC+TGG + chr7_3:78856863-78856882 Msa1127290:CDS 45.0%
!! GTTGATGGATTGTAACCAGG+TGG - chr7_3:78856881-78856900 None:intergenic 45.0%
GTCCTTTGCCATGTTTGGTT+TGG + chr7_3:78856906-78856925 Msa1127290:CDS 45.0%
GACCAAACCAAACATGGCAA+AGG - chr7_3:78856911-78856930 None:intergenic 45.0%
GGGTAAGACCAAACCAAACA+TGG - chr7_3:78856917-78856936 None:intergenic 45.0%
!! TGTTTGGTTTGGTCTTACCC+TGG + chr7_3:78856917-78856936 Msa1127290:CDS 45.0%
GGCTCTCCAAATGAATTTGC+AGG + chr7_3:78856977-78856996 Msa1127290:CDS 45.0%
! CCTTTTAGCCAGCCAAAGAA+GGG - chr7_3:78857020-78857039 None:intergenic 45.0%
! ACCTTTTAGCCAGCCAAAGA+AGG - chr7_3:78857021-78857040 None:intergenic 45.0%
TGCAGGTTTGCAATCCTATC+TGG + chr7_3:78857172-78857191 Msa1127290:intron 45.0%
GGCCCAACCATTCCTATTAT+CGG + chr7_3:78857193-78857212 Msa1127290:CDS 45.0%
CGCCGATAATAGGAATGGTT+GGG - chr7_3:78857198-78857217 None:intergenic 45.0%
TCGCCGATAATAGGAATGGT+TGG - chr7_3:78857199-78857218 None:intergenic 45.0%
AACCATTCCTATTATCGGCG+AGG + chr7_3:78857198-78857217 Msa1127290:CDS 45.0%
ACCATTCCTATTATCGGCGA+GGG + chr7_3:78857199-78857218 Msa1127290:CDS 45.0%
GCAATTAGTTGCAAGTGCAG+AGG + chr7_3:78857501-78857520 Msa1127290:CDS 45.0%
AATAAAAGCTTACCCCACGC+CGG - chr7_3:78857546-78857565 None:intergenic 45.0%
CTTTGGATGAGCTACCTAGA+TGG - chr7_3:78857640-78857659 None:intergenic 45.0%
ATTCATGACTGCCAACCTTC+TGG + chr7_3:78857692-78857711 Msa1127290:CDS 45.0%
!!! GCCCCTCATCTTTTTTGTTG+TGG + chr7_3:78857720-78857739 Msa1127290:CDS 45.0%
TGTTGTGGAATTGCTCGTTC+TGG + chr7_3:78857735-78857754 Msa1127290:CDS 45.0%
CCTGAAAACCGAAAGGAGTA+AGG - chr7_3:78857776-78857795 None:intergenic 45.0%
! CCTTACTCCTTTCGGTTTTC+AGG + chr7_3:78857773-78857792 Msa1127290:CDS 45.0%
GGTAGTACCTGAAAACCGAA+AGG - chr7_3:78857783-78857802 None:intergenic 45.0%
TGAAGACAGAACTCTTTGGG+AGG + chr7_3:78857971-78857990 Msa1127290:CDS 45.0%
GCCTATCTTGCTTATCCATG+GGG + chr7_3:78858049-78858068 Msa1127290:CDS 45.0%
TCCCCATGGATAAGCAAGAT+AGG - chr7_3:78858053-78858072 None:intergenic 45.0%
GGGGAAGAGGATAATAATCC+AGG + chr7_3:78858068-78858087 Msa1127290:CDS 45.0%
TCCAGGAACATTAACCATGC+AGG + chr7_3:78858085-78858104 Msa1127290:CDS 45.0%
ACCTGCATGGTTAATGTTCC+TGG - chr7_3:78858089-78858108 None:intergenic 45.0%
GGCTAAAGTAAGACTCCAAG+GGG - chr7_3:78858187-78858206 None:intergenic 45.0%
!! TTCAATGCTCTGAAGGGTCA+TGG + chr7_3:78858257-78858276 Msa1127290:CDS 45.0%
! ATGCATGTCCTTTGGGAAAC+AGG + chr7_3:78858344-78858363 Msa1127290:CDS 45.0%
! TCCTTTGGGAAACAGGTAGA+TGG + chr7_3:78858351-78858370 Msa1127290:CDS 45.0%
GTGTCAAATACTTCCGATGC+AGG + chr7_3:78858389-78858408 Msa1127290:CDS 45.0%
GCAGGTGAAGATCATGATAC+TGG + chr7_3:78858407-78858426 Msa1127290:CDS 45.0%
TGCAGATGCTGAAAGCAAAG+TGG + chr7_3:78858460-78858479 Msa1127290:CDS 45.0%
GGAAGAAGAGAAGGGTTGGA+AGG - chr7_3:78853247-78853266 None:intergenic 50.0%
GAGAGGAAGAAGAGAAGGGT+TGG - chr7_3:78853251-78853270 None:intergenic 50.0%
GAGCGAGAGGAAGAAGAGAA+GGG - chr7_3:78853255-78853274 None:intergenic 50.0%
AGGTGCTAAATGGCGAAAGC+GGG - chr7_3:78853338-78853357 None:intergenic 50.0%
! GAGGTGCTAAATGGCGAAAG+CGG - chr7_3:78853339-78853358 None:intergenic 50.0%
!! CAGCAGTGAGAGGTGCTAAA+TGG - chr7_3:78853348-78853367 None:intergenic 50.0%
ACTGCTGTCTCCACTGAAGA+CGG + chr7_3:78853361-78853380 Msa1127290:CDS 50.0%
!! ATCGTAGAAAGTATCGGCGG+TGG - chr7_3:78853425-78853444 None:intergenic 50.0%
TGTTCCTCCACCTGTGATCA+GGG + chr7_3:78854146-78854165 Msa1127290:CDS 50.0%
TCAACGATGTCCCTGATCAC+AGG - chr7_3:78854159-78854178 None:intergenic 50.0%
GGCCTTGCTAATTCAGTCAG+TGG - chr7_3:78854258-78854277 None:intergenic 50.0%
TCAGGTCCTAGTGTACCATC+AGG - chr7_3:78854375-78854394 None:intergenic 50.0%
TGATGGTACACTAGGACCTG+AGG + chr7_3:78854374-78854393 Msa1127290:CDS 50.0%
GGACCTGAGGTTGAGATACA+CGG + chr7_3:78854387-78854406 Msa1127290:CDS 50.0%
GAGATACACGGTTACCCTGA+AGG + chr7_3:78854399-78854418 Msa1127290:CDS 50.0%
CAGCATTCGTGTGAATGAGG+AGG + chr7_3:78854473-78854492 Msa1127290:CDS 50.0%
! CAGAGTATGGGTTGCAGATG+TGG + chr7_3:78854515-78854534 Msa1127290:CDS 50.0%
TGGGTTGCAGATGTGGAAAC+AGG + chr7_3:78854522-78854541 Msa1127290:CDS 50.0%
GGGTTGCAGATGTGGAAACA+GGG + chr7_3:78854523-78854542 Msa1127290:CDS 50.0%
TGCACCATTCCATCAACTCG+TGG + chr7_3:78854636-78854655 Msa1127290:CDS 50.0%
!! AGCTCCACGAGTTGATGGAA+TGG - chr7_3:78854643-78854662 None:intergenic 50.0%
!! GTAGAGTTATGGAGTGCCGA+TGG + chr7_3:78854960-78854979 Msa1127290:CDS 50.0%
CATCCCTTTCCGCACACTAT+TGG - chr7_3:78855042-78855061 None:intergenic 50.0%
GAGCAATCATTCGGGTACAC+AGG + chr7_3:78855382-78855401 Msa1127290:intron 50.0%
AGGGTAGAAACTCAAGACGG+AGG + chr7_3:78855746-78855765 Msa1127290:intron 50.0%
AGACGGAGGTGATGCAAAAG+TGG + chr7_3:78855760-78855779 Msa1127290:CDS 50.0%
! CAACCTGCTGAAGCACTAGA+AGG + chr7_3:78855812-78855831 Msa1127290:CDS 50.0%
TCACCTTCTAGTGCTTCAGC+AGG - chr7_3:78855818-78855837 None:intergenic 50.0%
AGCACTAGAAGGTGAACAGC+CGG + chr7_3:78855823-78855842 Msa1127290:CDS 50.0%
CATCAACCATGAACCTGCTC+AGG - chr7_3:78856153-78856172 None:intergenic 50.0%
AGAACATGGGTAGTCTCTCC+TGG + chr7_3:78856262-78856281 Msa1127290:CDS 50.0%
GGAGTCACATCTTCAGATCC+AGG - chr7_3:78856283-78856302 None:intergenic 50.0%
GATCGATCGAATAGGATGCG+TGG - chr7_3:78856304-78856323 None:intergenic 50.0%
GCTTGAGTTCTCCGTAGCAT+GGG - chr7_3:78856358-78856377 None:intergenic 50.0%
AGCTTGAGTTCTCCGTAGCA+TGG - chr7_3:78856359-78856378 None:intergenic 50.0%
ATGCTACGGAGAACTCAAGC+TGG + chr7_3:78856358-78856377 Msa1127290:CDS 50.0%
TGCTACGGAGAACTCAAGCT+GGG + chr7_3:78856359-78856378 Msa1127290:CDS 50.0%
GAAGTGGTGCAACACCAGAA+GGG + chr7_3:78856443-78856462 Msa1127290:CDS 50.0%
AGGAATGGAACGTTCCCTTC+TGG - chr7_3:78856460-78856479 None:intergenic 50.0%
! CAAGCTGAGGGTATGGATGA+GGG - chr7_3:78856787-78856806 None:intergenic 50.0%
AGACGGTCCTTTGCCATGTT+TGG + chr7_3:78856901-78856920 Msa1127290:CDS 50.0%
CATTTGGAGAGCCTCGAACT+TGG - chr7_3:78856970-78856989 None:intergenic 50.0%
! CCCTTCTTTGGCTGGCTAAA+AGG + chr7_3:78857017-78857036 Msa1127290:CDS 50.0%
TAGGAATGGTTGGGCCAGAT+AGG - chr7_3:78857189-78857208 None:intergenic 50.0%
ACCCTCGCCGATAATAGGAA+TGG - chr7_3:78857203-78857222 None:intergenic 50.0%
ACTTCACCCTCGCCGATAAT+AGG - chr7_3:78857208-78857227 None:intergenic 50.0%
CTGCCGTGGAAGAAGTTATC+CGG + chr7_3:78857524-78857543 Msa1127290:CDS 50.0%
ACGCCGGATAACTTCTTCCA+CGG - chr7_3:78857530-78857549 None:intergenic 50.0%
TGGAAGAAGTTATCCGGCGT+GGG + chr7_3:78857530-78857549 Msa1127290:CDS 50.0%
! GCTGTTGGTGGACATTCCTA+TGG + chr7_3:78857666-78857685 Msa1127290:CDS 50.0%
GGCAGTCATGAATGCACCAT+AGG - chr7_3:78857685-78857704 None:intergenic 50.0%
CTTGCTTATCCATGGGGAAG+AGG + chr7_3:78858055-78858074 Msa1127290:CDS 50.0%
! AGGGTCATGGTGCTCTAAGT+CGG + chr7_3:78858270-78858289 Msa1127290:CDS 50.0%
AAAGCCATGGCTATTCTGCC+AGG + chr7_3:78858312-78858331 Msa1127290:CDS 50.0%
AAGCCATGGCTATTCTGCCA+GGG + chr7_3:78858313-78858332 Msa1127290:CDS 50.0%
TTTCCCTGGCAGAATAGCCA+TGG - chr7_3:78858319-78858338 None:intergenic 50.0%
GACATGCATGATGCTTTCCC+TGG - chr7_3:78858333-78858352 None:intergenic 50.0%
GCCATCTACCTGTTTCCCAA+AGG - chr7_3:78858355-78858374 None:intergenic 50.0%
! TTCTTTGCTGCCACTTCCAC+TGG - chr7_3:78858492-78858511 None:intergenic 50.0%
CTCTGCCAAGGTCATCATTG+TGG + chr7_3:78858543-78858562 Msa1127290:CDS 50.0%
GGGTTGGAAGGGAACGATGA+TGG - chr7_3:78853235-78853254 None:intergenic 55.0%
GGAGCGAGAGGAAGAAGAGA+AGG - chr7_3:78853256-78853275 None:intergenic 55.0%
TAAATGGCGAAAGCGGGAGG+TGG - chr7_3:78853332-78853351 None:intergenic 55.0%
TGCTAAATGGCGAAAGCGGG+AGG - chr7_3:78853335-78853354 None:intergenic 55.0%
TCAGTGGAGACAGCAGTGAG+AGG - chr7_3:78853358-78853377 None:intergenic 55.0%
GGAAGAAACGGAGCCGTTGA+CGG - chr7_3:78853398-78853417 None:intergenic 55.0%
!! GTAGAAAGTATCGGCGGTGG+CGG - chr7_3:78853422-78853441 None:intergenic 55.0%
GTGTTCCTCCACCTGTGATC+AGG + chr7_3:78854145-78854164 Msa1127290:CDS 55.0%
ATGTCCCTGATCACAGGTGG+AGG - chr7_3:78854153-78854172 None:intergenic 55.0%
ACGATGTCCCTGATCACAGG+TGG - chr7_3:78854156-78854175 None:intergenic 55.0%
GACTGAATTAGCAAGGCCGG+AGG + chr7_3:78854260-78854279 Msa1127290:CDS 55.0%
AGCAAGGCCGGAGGAAAAGT+TGG + chr7_3:78854269-78854288 Msa1127290:CDS 55.0%
TTTGGCCCACCAGGAACCAA+AGG - chr7_3:78854678-78854697 None:intergenic 55.0%
ATCTGGAGAAGGGTCCAGAG+AGG - chr7_3:78854865-78854884 None:intergenic 55.0%
CAGCCCCCAAATCTTGCGTA+TGG - chr7_3:78855431-78855450 None:intergenic 55.0%
! AAGTGTGCTGCTCAAAGCCG+AGG + chr7_3:78855934-78855953 Msa1127290:intron 55.0%
TGCTCAGGCCCTATCCTAAC+AGG - chr7_3:78856138-78856157 None:intergenic 55.0%
TGTTAGGATAGGGCCTGAGC+AGG + chr7_3:78856137-78856156 Msa1127290:intron 55.0%
ATAGGGCCTGAGCAGGTTCA+TGG + chr7_3:78856144-78856163 Msa1127290:intron 55.0%
! ATCCTGGCTCTCCCATGCTA+CGG + chr7_3:78856344-78856363 Msa1127290:CDS 55.0%
GGAAGTGGTGCAACACCAGA+AGG + chr7_3:78856442-78856461 Msa1127290:CDS 55.0%
! GCAAGCTGAGGGTATGGATG+AGG - chr7_3:78856788-78856807 None:intergenic 55.0%
GGCAAAGGACCGTCTGTTGA+TGG - chr7_3:78856896-78856915 None:intergenic 55.0%
GATGCTGCTAGCCAAGTTCG+AGG + chr7_3:78856956-78856975 Msa1127290:CDS 55.0%
GTTCCACGTCAGCCCTTCTT+TGG + chr7_3:78857005-78857024 Msa1127290:CDS 55.0%
TATCGGCGAGGGTGAAGTAG+AGG + chr7_3:78857210-78857229 Msa1127290:CDS 55.0%
GTGGAAGAAGTTATCCGGCG+TGG + chr7_3:78857529-78857548 Msa1127290:CDS 55.0%
GGAAGAAGTTATCCGGCGTG+GGG + chr7_3:78857531-78857550 Msa1127290:CDS 55.0%
!! GTGCTGCTTTGCAGTCAGAC+AGG + chr7_3:78858231-78858250 Msa1127290:CDS 55.0%
! TCATGGTGCTCTAAGTCGGC+TGG + chr7_3:78858274-78858293 Msa1127290:CDS 55.0%
AGCAAAGTGGTTGCAGCCAG+TGG + chr7_3:78858473-78858492 Msa1127290:CDS 55.0%
CGACGGAGAGTGAGGAAACG+CGG - chr7_3:78853280-78853299 None:intergenic 60.0%
AGTTGGCAGCGGTTCTGCGA+CGG - chr7_3:78853297-78853316 None:intergenic 60.0%
CATGGAGGCGAAGTTGGCAG+CGG - chr7_3:78853308-78853327 None:intergenic 60.0%
GGTGGACATGGAGGCGAAGT+TGG - chr7_3:78853314-78853333 None:intergenic 60.0%
AAAGCGGGAGGTGGACATGG+AGG - chr7_3:78853323-78853342 None:intergenic 60.0%
AGGCCGGAGGAAAAGTTGGC+TGG + chr7_3:78854273-78854292 Msa1127290:CDS 60.0%
! GGTGGAGCTCCACGAGTTGA+TGG - chr7_3:78854648-78854667 None:intergenic 60.0%
CAGCCAAAGAAGGGCTGACG+TGG - chr7_3:78857011-78857030 None:intergenic 60.0%
CACGTCAGCCCTTCTTTGGC+TGG + chr7_3:78857009-78857028 Msa1127290:CDS 60.0%
! AGGGGCATGTGCCAGAAGGT+TGG - chr7_3:78857706-78857725 None:intergenic 60.0%
! GATGAGGGGCATGTGCCAGA+AGG - chr7_3:78857710-78857729 None:intergenic 60.0%
GTGGTTGCAGCCAGTGGAAG+TGG + chr7_3:78858479-78858498 Msa1127290:CDS 60.0%
GGAGAGTGGAGCGATGCCGA+TGG - chr7_3:78853198-78853217 None:intergenic 65.0%
AGGAAACGCGGAGGAGCGAG+AGG - chr7_3:78853268-78853287 None:intergenic 65.0%
CGGAGAGTGAGGAAACGCGG+AGG - chr7_3:78853277-78853296 None:intergenic 65.0%
CGGTTCTGCGACGGAGAGTG+AGG - chr7_3:78853288-78853307 None:intergenic 65.0%
GCGAAAGCGGGAGGTGGACA+TGG - chr7_3:78853326-78853345 None:intergenic 65.0%
GTCTCCACTGAAGACGGCGC+CGG + chr7_3:78853367-78853386 Msa1127290:CDS 65.0%
!! GGCGGTGGCGGAGGAAGAAA+CGG - chr7_3:78853410-78853429 None:intergenic 65.0%
!! GAAAGTATCGGCGGTGGCGG+AGG - chr7_3:78853419-78853438 None:intergenic 65.0%
CTCCGTAGCATGGGAGAGCC+AGG - chr7_3:78856349-78856368 None:intergenic 65.0%
TGCAAGTGCAGAGGCTGCCG+TGG + chr7_3:78857510-78857529 Msa1127290:CDS 65.0%
! TCCACTGAAGACGGCGCCGG+TGG + chr7_3:78853370-78853389 Msa1127290:CDS 70.0%
TCCACCGGCGCCGTCTTCAG+TGG - chr7_3:78853374-78853393 None:intergenic 70.0%
GGAGCCGTTGACGGCTCCAC+CGG - chr7_3:78853389-78853408 None:intergenic 70.0%
!! GGCGCCGGTGGAGCCGTCAA+CGG + chr7_3:78853382-78853401 Msa1127290:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 78853125 78858568 78853125 ID=Msa1127290;Name=Msa1127290
chr7_3 mRNA 78853125 78858568 78853125 ID=Msa1127290-mRNA-1;Parent=Msa1127290;Name=Msa1127290-mRNA-1;_AED=0.17;_eAED=0.17;_QI=47|0.88|0.9|1|1|1|10|0|990
chr7_3 exon 78853125 78853451 78853125 ID=Msa1127290-mRNA-1:exon:22130;Parent=Msa1127290-mRNA-1
chr7_3 exon 78854118 78855105 78854118 ID=Msa1127290-mRNA-1:exon:22131;Parent=Msa1127290-mRNA-1
chr7_3 exon 78855748 78855876 78855748 ID=Msa1127290-mRNA-1:exon:22132;Parent=Msa1127290-mRNA-1
chr7_3 exon 78856195 78856494 78856195 ID=Msa1127290-mRNA-1:exon:22133;Parent=Msa1127290-mRNA-1
chr7_3 exon 78856580 78857038 78856580 ID=Msa1127290-mRNA-1:exon:22134;Parent=Msa1127290-mRNA-1
chr7_3 exon 78857177 78857242 78857177 ID=Msa1127290-mRNA-1:exon:22135;Parent=Msa1127290-mRNA-1
chr7_3 exon 78857492 78857552 78857492 ID=Msa1127290-mRNA-1:exon:22136;Parent=Msa1127290-mRNA-1
chr7_3 exon 78857645 78857794 78857645 ID=Msa1127290-mRNA-1:exon:22137;Parent=Msa1127290-mRNA-1
chr7_3 exon 78857969 78858106 78857969 ID=Msa1127290-mRNA-1:exon:22138;Parent=Msa1127290-mRNA-1
chr7_3 exon 78858167 78858568 78858167 ID=Msa1127290-mRNA-1:exon:22139;Parent=Msa1127290-mRNA-1
chr7_3 five_prime_UTR 78853125 78853171 78853125 ID=Msa1127290-mRNA-1:five_prime_utr;Parent=Msa1127290-mRNA-1
chr7_3 CDS 78853172 78853451 78853172 ID=Msa1127290-mRNA-1:cds;Parent=Msa1127290-mRNA-1
chr7_3 CDS 78854118 78855105 78854118 ID=Msa1127290-mRNA-1:cds;Parent=Msa1127290-mRNA-1
chr7_3 CDS 78855748 78855876 78855748 ID=Msa1127290-mRNA-1:cds;Parent=Msa1127290-mRNA-1
chr7_3 CDS 78856195 78856494 78856195 ID=Msa1127290-mRNA-1:cds;Parent=Msa1127290-mRNA-1
chr7_3 CDS 78856580 78857038 78856580 ID=Msa1127290-mRNA-1:cds;Parent=Msa1127290-mRNA-1
chr7_3 CDS 78857177 78857242 78857177 ID=Msa1127290-mRNA-1:cds;Parent=Msa1127290-mRNA-1
chr7_3 CDS 78857492 78857552 78857492 ID=Msa1127290-mRNA-1:cds;Parent=Msa1127290-mRNA-1
chr7_3 CDS 78857645 78857794 78857645 ID=Msa1127290-mRNA-1:cds;Parent=Msa1127290-mRNA-1
chr7_3 CDS 78857969 78858106 78857969 ID=Msa1127290-mRNA-1:cds;Parent=Msa1127290-mRNA-1
chr7_3 CDS 78858167 78858568 78858167 ID=Msa1127290-mRNA-1:cds;Parent=Msa1127290-mRNA-1
Gene Sequence

>Msa1127290

ATGATGCGGATACACAAACTATACCATCGGCATCGCTCCACTCTCCTCTCTTTTTCTTCACCATCATCGTTCCCTTCCAACCCTTCTCTTCTTCCTCTCGCTCCTCCGCGTTTCCTCACTCTCCGTCGCAGAACCGCTGCCAACTTCGCCTCCATGTCCACCTCCCGCTTTCGCCATTTAGCACCTCTCACTGCTGTCTCCACTGAAGACGGCGCCGGTGGAGCCGTCAACGGCTCCGTTTCTTCCTCCGCCACCGCCGATACTTTCTACGATTACGAAGATGATTCAGCTTTAGGAGTAGGGTATCGTGTTCCTCCACCTGTGATCAGGGACATCGTTGATGCTCCGCCAGTTCCTGCATTGTCATTTTCACCATTTAGAGACAAAATTATTTTTCTCAAGCGAAGAGCTTTACCTCCACTGACTGAATTAGCAAGGCCGGAGGAAAAGTTGGCTGGTTTACGTATTGATGGATACTGCAATTCAAGGAGTCGCATGTCATTCTACACCGGTTTAGGGATCCATGAAATTCTTCCTGATGGTACACTAGGACCTGAGGTTGAGATACACGGTTACCCTGAAGGTGCGAAGATAAATTTTGTTACTTGGTCTCCTGATGCTCGACATTTATCCTTCAGCATTCGTGTGAATGAGGAGGACAATAATACTAGTAAACTCAGAGTATGGGTTGCAGATGTGGAAACAGGGAAAGCTAGACCTTTGTTTCAGTCGCCTGATGTATATTTGAATGCAGTTTTTGAAAACTATGTTTGGGTAGATAACTCTACATTGTTAGTTTGCACCATTCCATCAACTCGTGGAGCTCCACCAAAGAAACCTTTGGTTCCTGGTGGGCCAAAAATTCAATCTAATGAGCAGAAAAACATTATTCAAGTAAGAACATTCCAGGATTTGCTGAAGGATGAATACGATGAAGATTTGTTTGACTACTATGCGACCTCTCAGCTTGTTTTAGCATCTTTAGATGGTACTACAAAGGATTTTGGACCTCCAGCTGTTTATACCTCTCTGGACCCTTCTCCAGATGAGAAGTACATTATGATTGATTCAATGCATAGGCCATACTCTTTTATTGTACCTTGTGGAAGATTTCCAAAGAAGGTAGAGTTATGGAGTGCCGATGGAAAATTTGTCAGGGAGATTTGTGACTTGCCCCTTGCCGAAGACATTCCAATTACATCCAATAGTGTGCGGAAAGGGATGCGTTCTATTAATTGGAGAGCTGATAAGCCATCAACGCTTTACTGGGTAGAAACTCAAGACGGAGGTGATGCAAAAGTGGAAGTTTCTCCTCGTGATATAATCTACTCACAACCTGCTGAAGCACTAGAAGGTGAACAGCCGGTGATATTACACAAGCTTGATCTTCGCTATGGAGGAATTTCTTGGTGTGATGATTCACTGGCTTTTGTATACGAATCTTGGTATAAAACAAGGCGAATAAGAACATGGGTAGTCTCTCCTGGATCTGAAGATGTGACTCCACGCATCCTATTCGATCGATCTTCAGAAGATGTATACTCTGATCCTGGCTCTCCCATGCTACGGAGAACTCAAGCTGGGACATATATTATTGCAAAGATAAAGAAAGGGGGCGATGAAGGAAGATATATTATACTGAATGGAAGTGGTGCAACACCAGAAGGGAACGTTCCATTCCTTGATCTGTTTGACATAAATACAGGTAGTAAGGAACGAATCTGGGAGAGTGATAAGGAAAAGTACTTTGAGTCTGTTGTTGCTCTAATGTCGGATCAAGAAGAAGGAGATTTACAGTTAGATAGGCTGAAAATACTGACTTCAAAAGAGTCAAAAACTGAAAACACCCAATATAATTTTATTAGTTGGCCAGATAAAAAAATAATTCAGGTTACAAATTTCCCTCATCCATACCCTCAGCTTGCATCTTTGCAGAAAGAGATGATCAGGTATCAAAGAAAAGACGGGGTTCAACTCACTGCTACATTATACTTGCCACCTGGTTACAATCCATCAACAGACGGTCCTTTGCCATGTTTGGTTTGGTCTTACCCTGGAGAATTTAAGAGCAAAGATGCTGCTAGCCAAGTTCGAGGCTCTCCAAATGAATTTGCAGGGATTGGTTCCACGTCAGCCCTTCTTTGGCTGGCTAAAAGGTTTGCAATCCTATCTGGCCCAACCATTCCTATTATCGGCGAGGGTGAAGTAGAGGCTAATGATAGCTATGTAGAGCAATTAGTTGCAAGTGCAGAGGCTGCCGTGGAAGAAGTTATCCGGCGTGGGGTAGCTCATCCAAAGAAAATAGCTGTTGGTGGACATTCCTATGGTGCATTCATGACTGCCAACCTTCTGGCACATGCCCCTCATCTTTTTTGTTGTGGAATTGCTCGTTCTGGTGCTTACAACAGAACCCTTACTCCTTTCGGTTTTCAGAATGAAGACAGAACTCTTTGGGAGGCCACTGATACTTATGTAGAGATGAGTCCTTTTATGTCGGCTAATAAAATTAAGAAGCCTATCTTGCTTATCCATGGGGAAGAGGATAATAATCCAGGAACATTAACCATGCAGTATTTGAAAGGGATAATCCCCTTGGAGTCTTACTTTAGCCAATTGCTTGCTGCTTCTATTCTTTGTGCTGCTTTGCAGTCAGACAGGTTTTTCAATGCTCTGAAGGGTCATGGTGCTCTAAGTCGGCTGGTGATTCTGCCTTATGAAAGCCATGGCTATTCTGCCAGGGAAAGCATCATGCATGTCCTTTGGGAAACAGGTAGATGGCTGCATAAATACTGTGTGTCAAATACTTCCGATGCAGGTGAAGATCATGATACTGGCACAGTCAAAGAAAATATTAGCAAAGGAATTGCAGATGCTGAAAGCAAAGTGGTTGCAGCCAGTGGAAGTGGCAGCAAAGAAGCGTGTGATCTCGAGCATGAAGAATCTCATTCTCTGCCAAGGTCATCATTGTGGTAA
Protein sequence

>Msa1127290

MMRIHKLYHRHRSTLLSFSSPSSFPSNPSLLPLAPPRFLTLRRRTAANFASMSTSRFRHLAPLTAVSTEDGAGGAVNGSVSSSATADTFYDYEDDSALGVGYRVPPPVIRDIVDAPPVPALSFSPFRDKIIFLKRRALPPLTELARPEEKLAGLRIDGYCNSRSRMSFYTGLGIHEILPDGTLGPEVEIHGYPEGAKINFVTWSPDARHLSFSIRVNEEDNNTSKLRVWVADVETGKARPLFQSPDVYLNAVFENYVWVDNSTLLVCTIPSTRGAPPKKPLVPGGPKIQSNEQKNIIQVRTFQDLLKDEYDEDLFDYYATSQLVLASLDGTTKDFGPPAVYTSLDPSPDEKYIMIDSMHRPYSFIVPCGRFPKKVELWSADGKFVREICDLPLAEDIPITSNSVRKGMRSINWRADKPSTLYWVETQDGGDAKVEVSPRDIIYSQPAEALEGEQPVILHKLDLRYGGISWCDDSLAFVYESWYKTRRIRTWVVSPGSEDVTPRILFDRSSEDVYSDPGSPMLRRTQAGTYIIAKIKKGGDEGRYIILNGSGATPEGNVPFLDLFDINTGSKERIWESDKEKYFESVVALMSDQEEGDLQLDRLKILTSKESKTENTQYNFISWPDKKIIQVTNFPHPYPQLASLQKEMIRYQRKDGVQLTATLYLPPGYNPSTDGPLPCLVWSYPGEFKSKDAASQVRGSPNEFAGIGSTSALLWLAKRFAILSGPTIPIIGEGEVEANDSYVEQLVASAEAAVEEVIRRGVAHPKKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATDTYVEMSPFMSANKIKKPILLIHGEEDNNPGTLTMQYLKGIIPLESYFSQLLAASILCAALQSDRFFNALKGHGALSRLVILPYESHGYSARESIMHVLWETGRWLHKYCVSNTSDAGEDHDTGTVKENISKGIADAESKVVAASGSGSKEACDLEHEESHSLPRSSLW*