AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1360070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1360070 MtrunA17_Chr5g0393451 98.271 1099 12 2 1 1099 1 1092 0.0 2221
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1360070 AT1G49630.3 76.007 1067 239 8 42 1098 19 1078 0.0 1675
Msa1360070 AT1G49630.1 76.007 1067 239 8 42 1098 19 1078 0.0 1675
Msa1360070 AT1G49630.2 76.007 1067 239 8 42 1098 19 1078 0.0 1675
Msa1360070 AT3G19170.1 78.751 993 203 3 108 1099 95 1080 0.0 1667
Msa1360070 AT3G19170.2 76.737 993 212 5 108 1099 95 1069 0.0 1613
Msa1360070 AT1G49630.5 79.784 925 185 2 175 1098 7 930 0.0 1574
Msa1360070 AT1G49630.4 78.034 824 179 2 276 1098 6 828 0.0 1365

Find 276 sgRNAs with CRISPR-Local

Find 638 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCAACTAAACCAATTAAT+TGG 0.112942 tig0016935:+51528 Msa1360070:CDS
CCATGTATTGCTAATGTATT+TGG 0.135870 tig0016935:-54447 None:intergenic
CCATTGCTACACCAAATATT+TGG 0.196069 tig0016935:+53744 Msa1360070:CDS
GTTTGCATATTTAGGGTAAA+TGG 0.198410 tig0016935:+50351 Msa1360070:intron
AAGATGAATTTCTCTATTAA+TGG 0.198802 tig0016935:-50473 None:intergenic
AGTCTAACGTTCCAAATATT+TGG 0.199487 tig0016935:-53755 None:intergenic
CAGTATGTTGCGGTATATAC+TGG 0.218929 tig0016935:+54943 Msa1360070:intron
AAAGTAAATCCTGAATTTAA+AGG 0.239260 tig0016935:-55567 None:intergenic
TAAAATAATTATCTCAAAAT+AGG 0.243222 tig0016935:-55631 None:intergenic
GGAACATGAATAGGTTCTTT+AGG 0.245740 tig0016935:-50814 None:intergenic
ATCCCCAATGGTCCCGATTA+TGG 0.250985 tig0016935:-54728 None:intergenic
TCAACGCCATATGTGTTATC+TGG 0.257591 tig0016935:-48297 None:intergenic
TTCCTTTGGTACCACTGTTT+TGG 0.261312 tig0016935:+51035 Msa1360070:CDS
AGCATATGGTTTCCCTTAAC+TGG 0.266266 tig0016935:+49888 Msa1360070:CDS
GATGCTGGTTATAAGCTTAA+TGG 0.276272 tig0016935:+54407 Msa1360070:CDS
GTTCAACCTTTGATTCGTTT+GGG 0.285001 tig0016935:-49793 None:intergenic
TGAACATCCTCGACACATTT+AGG 0.286941 tig0016935:-47957 None:intergenic
AAAGAAAGCCCTTTAAATTC+AGG 0.288614 tig0016935:+55558 Msa1360070:exon
ATCCCAGCAATTCACGGATT+TGG 0.290483 tig0016935:+48674 Msa1360070:CDS
GGTTCAACCTTTGATTCGTT+TGG 0.294249 tig0016935:-49794 None:intergenic
TCCCAATTAATTGGTTTAGT+TGG 0.315523 tig0016935:-51530 None:intergenic
AAAAGAGAATTGATCAAGAT+TGG 0.323255 tig0016935:+53573 Msa1360070:CDS
GAGAATTATTATATTATTGT+AGG 0.323302 tig0016935:+47115 Msa1360070:five_prime_UTR
TCTGAAGATATCACTTATAA+AGG 0.325491 tig0016935:+48023 Msa1360070:CDS
TTTCTACAGGTTAATTATGT+TGG 0.327149 tig0016935:+54365 Msa1360070:intron
GAACATGAATAGGTTCTTTA+GGG 0.335851 tig0016935:-50813 None:intergenic
CTTGCGGCGGTGGGAGTGAA+TGG 0.339972 tig0016935:-47298 None:intergenic
AAACCAAATCCGTGAATTGC+TGG 0.342696 tig0016935:-48677 None:intergenic
TTTAAAGCTTCTGGTGGATC+AGG 0.343266 tig0016935:-50760 None:intergenic
ACGAGTTATCGGAAATATAA+TGG 0.345323 tig0016935:+47168 Msa1360070:CDS
TAGCTCAGTTTCCAAGTCTA+AGG 0.346324 tig0016935:-49927 None:intergenic
TAGGATTAATTCAACTTCAA+TGG 0.349493 tig0016935:+47207 Msa1360070:CDS
ATGGAAGCAGTTAAGGATAA+AGG 0.351452 tig0016935:+55463 Msa1360070:CDS
ACTCTTACAAAAGCCATAAT+CGG 0.362269 tig0016935:+54715 Msa1360070:CDS
TTCTACAGGTTAATTATGTT+GGG 0.364723 tig0016935:+54366 Msa1360070:intron
TGGTGACTTCTTAAGAGAAT+TGG 0.365879 tig0016935:+54678 Msa1360070:CDS
GAAGCAAGAGCTTCTTCCTT+TGG 0.371838 tig0016935:+51021 Msa1360070:CDS
CCTCCATTCTTGCTCTACTC+TGG 0.372732 tig0016935:-51857 None:intergenic
AAGCCATAATCGGGACCATT+GGG 0.373438 tig0016935:+54725 Msa1360070:CDS
TCCAACTAAACCAATTAATT+GGG 0.375136 tig0016935:+51529 Msa1360070:CDS
TCTTCACGAGCAGCTTTCTC+CGG 0.378170 tig0016935:-50631 None:intergenic
AACGATGAGAACAAAGTCTT+TGG 0.378667 tig0016935:+47693 Msa1360070:CDS
TATCAGAGAGCAACCAGTTA+AGG 0.379114 tig0016935:-49901 None:intergenic
TTGAGAGGCTGCGGCGGCGG+CGG 0.380908 tig0016935:-47342 None:intergenic
AAGTAAATCCTGAATTTAAA+GGG 0.392910 tig0016935:-55566 None:intergenic
TGATGCAATGGAAGCAGTTA+AGG 0.395124 tig0016935:+55456 Msa1360070:CDS
ACAGGGTAACAAGTCCTATC+AGG 0.399059 tig0016935:-47870 None:intergenic
GCTCGTCCAAGTATATTATC+TGG 0.404875 tig0016935:-48161 None:intergenic
GGTGATGCCATTGTTGGTGG+TGG 0.408689 tig0016935:+50028 Msa1360070:CDS
TTTCTTTATTTGAAAGAAGT+TGG 0.410722 tig0016935:-55542 None:intergenic
ACAATCAGTTCTTCTACCTT+AGG 0.411433 tig0016935:-50118 None:intergenic
CAAGAGTTTGAAGGAATTCA+AGG 0.412469 tig0016935:-53550 None:intergenic
TGCCCATCTCCAGCAATGAT+TGG 0.413819 tig0016935:-51488 None:intergenic
GCTTCCCTCGTTTCTTCTCC+AGG 0.415645 tig0016935:+47445 Msa1360070:CDS
TTGCGGCGGTGGGAGTGAAT+GGG 0.416301 tig0016935:-47297 None:intergenic
GGGATCACGATAAGACAAAA+AGG 0.416539 tig0016935:-54620 None:intergenic
TCAATTTAGCATTGGAATGA+AGG 0.416737 tig0016935:+50075 Msa1360070:CDS
AGGAGAGAACCTTGCGGCGG+TGG 0.417046 tig0016935:-47308 None:intergenic
AGAGGCTGCGGCGGCGGCGG+AGG 0.422991 tig0016935:-47339 None:intergenic
TTCCCAGAGTAGAGCAAGAA+TGG 0.423870 tig0016935:+51854 Msa1360070:CDS
AGGAATACCAGTGGAATCAT+TGG 0.427164 tig0016935:-47736 None:intergenic
TTCATACCTACTATAACCTT+TGG 0.427406 tig0016935:-54776 None:intergenic
TTTGCCGCATCTACATCATC+TGG 0.430260 tig0016935:-55508 None:intergenic
CTACTATAACCTTTGGCATC+AGG 0.430815 tig0016935:-54769 None:intergenic
CTTCACGAGCAGCTTTCTCC+GGG 0.431343 tig0016935:-50630 None:intergenic
TGGAAGCAGTTAAGGATAAA+GGG 0.433470 tig0016935:+55464 Msa1360070:CDS
TAGCCAATCATTGCTGGAGA+TGG 0.434077 tig0016935:+51485 Msa1360070:intron
CAAATATTTGGTGTAGCAAT+GGG 0.436009 tig0016935:-53743 None:intergenic
ATGCATTCACTTATCCTGAT+AGG 0.437102 tig0016935:+47856 Msa1360070:CDS
AGAATTATTATATTATTGTA+GGG 0.437496 tig0016935:+47116 Msa1360070:five_prime_UTR
TTGGTATTGGTGGAGGCGAC+AGG 0.438623 tig0016935:-47888 None:intergenic
AGGCTGGATGTCAGAAAAGA+TGG 0.439677 tig0016935:+52047 Msa1360070:CDS
GATGAAGTTGCGCGTGAACT+AGG 0.440088 tig0016935:+47570 Msa1360070:CDS
AGGCAGTATAAACGAGTTAT+CGG 0.444027 tig0016935:+47157 Msa1360070:CDS
TGGGATCGTGTACGTGTTAG+TGG 0.444902 tig0016935:+54473 Msa1360070:CDS
CCAAATACATTAGCAATACA+TGG 0.445707 tig0016935:+54447 Msa1360070:CDS
CGTGTTAGTGGTGGAGCTTA+TGG 0.451692 tig0016935:+54485 Msa1360070:CDS
TCCATTCACATCATCAGTGC+AGG 0.452497 tig0016935:+51578 Msa1360070:CDS
ATTTATCAAGCACCCTTGCT+TGG 0.454418 tig0016935:-53642 None:intergenic
GGGTGATTTGAAGAAGCATA+TGG 0.454425 tig0016935:+49874 Msa1360070:CDS
AATTCCTCAAAAGTCAACTT+AGG 0.454491 tig0016935:-48345 None:intergenic
AAAGAGAATTGATCAAGATT+GGG 0.456112 tig0016935:+53574 Msa1360070:CDS
AACGGAGAAACAGATATTGC+AGG 0.457343 tig0016935:+50657 Msa1360070:CDS
TGGAGATAGGAGGAAGTTGT+AGG 0.459668 tig0016935:+47188 Msa1360070:CDS
GACTTACCCTGCAGGGGAAG+GGG 0.460013 tig0016935:+49853 Msa1360070:CDS
AAGTTGAGAGGCTGCGGCGG+CGG 0.460252 tig0016935:-47345 None:intergenic
TTTGGCATCAGGAAGTTGAT+AGG 0.461058 tig0016935:-54758 None:intergenic
GTAGCAATGGGTGAGCTAGT+AGG 0.461363 tig0016935:-53731 None:intergenic
CAGAAAAGATGGGTGGTCTC+AGG 0.461843 tig0016935:+52058 Msa1360070:CDS
CGAACAATCATGTGACTACA+TGG 0.462587 tig0016935:-51612 None:intergenic
ACCTCAGTGGGAACATGAAT+AGG 0.465251 tig0016935:-50823 None:intergenic
GGGAAGCTCTGGTGGAGAAA+TGG 0.467047 tig0016935:-47429 None:intergenic
TTGATAAATATCACCGCTGA+TGG 0.467919 tig0016935:+53656 Msa1360070:CDS
AAGTATGACAACAGAAGATC+TGG 0.468106 tig0016935:+50690 Msa1360070:CDS
TTTGCACAGTTACTTTATGA+AGG 0.468347 tig0016935:-50502 None:intergenic
TTAAAGCTTCTGGTGGATCA+GGG 0.470497 tig0016935:-50759 None:intergenic
CTCTGATAAGCCCTTAGACT+TGG 0.470588 tig0016935:+49916 Msa1360070:CDS
AATTCAGGATTTACTTTGCA+AGG 0.470655 tig0016935:+55573 Msa1360070:exon
CCAAATATTTGGTGTAGCAA+TGG 0.476193 tig0016935:-53744 None:intergenic
CTCCATTCTTGCTCTACTCT+GGG 0.476800 tig0016935:-51856 None:intergenic
AATATTTGATATAAGATTGG+CGG 0.478379 tig0016935:+55781 Msa1360070:three_prime_UTR
GCAACCAACGTTTATGATGC+TGG 0.480406 tig0016935:+54392 Msa1360070:CDS
ATCAGAGAGCAACCAGTTAA+GGG 0.481739 tig0016935:-49900 None:intergenic
CGAGCAGCTTTCTCCGGGTC+CGG 0.482087 tig0016935:-50625 None:intergenic
TAGCAATGGGTGAGCTAGTA+GGG 0.482228 tig0016935:-53730 None:intergenic
TTCCAATGCTAAATTGAGGC+TGG 0.485674 tig0016935:-50069 None:intergenic
CGGCGGCGGCGGAGGAGAGT+CGG 0.486033 tig0016935:-47331 None:intergenic
CCTTTGAGTAACTCAACAAA+TGG 0.487250 tig0016935:-47813 None:intergenic
CTCCAGCCTCAATTTAGCAT+TGG 0.487282 tig0016935:+50067 Msa1360070:CDS
TGTTGTGTTTAATGAGATGA+AGG 0.488119 tig0016935:+48124 Msa1360070:CDS
GAGACTTACCCTGCAGGGGA+AGG 0.488569 tig0016935:+49851 Msa1360070:CDS
ATTACCATCCCAGCAATTCA+CGG 0.488844 tig0016935:+48668 Msa1360070:CDS
TTCATTCCAATGCTAAATTG+AGG 0.490681 tig0016935:-50073 None:intergenic
ACTTGGACGAGCTTCTCAAC+AGG 0.490880 tig0016935:+48172 Msa1360070:CDS
CTGATGCCAAAGGTTATAGT+AGG 0.492789 tig0016935:+54770 Msa1360070:CDS
CATGACCACTGCCTCTTAGC+CGG 0.493903 tig0016935:-51984 None:intergenic
CGGCTAAGAGGCAGTGGTCA+TGG 0.495662 tig0016935:+51985 Msa1360070:CDS
TAGCTGATCTTACAATGGAC+TGG 0.496141 tig0016935:-50270 None:intergenic
TCTCTGAGAGAGAACAATAC+CGG 0.497128 tig0016935:+50217 Msa1360070:CDS
AGACTTACCCTGCAGGGGAA+GGG 0.497934 tig0016935:+49852 Msa1360070:CDS
AAAACACTTGAGGTATATGA+TGG 0.499301 tig0016935:+54652 Msa1360070:CDS
CCCTGCACTGATGATGTGAA+TGG 0.499450 tig0016935:-51579 None:intergenic
AGAAGAAACGAGGGAAGCTC+TGG 0.499568 tig0016935:-47440 None:intergenic
ATCGGAAATATAATGGAGAT+AGG 0.500076 tig0016935:+47175 Msa1360070:CDS
TGGAATCATTGGGAGGAGTC+CGG 0.502497 tig0016935:-47725 None:intergenic
GTGATGCCATTGTTGGTGGT+GGG 0.504102 tig0016935:+50029 Msa1360070:CDS
ACATTAGCAATACATGGTTG+TGG 0.508197 tig0016935:+54453 Msa1360070:CDS
GAAATAATCCTTACCTGAGT+AGG 0.508471 tig0016935:-53806 None:intergenic
TGTATTCATAGAGGCCTCAA+TGG 0.508835 tig0016935:-50185 None:intergenic
TCTCATACTTCAGTGGCTCA+AGG 0.509137 tig0016935:-50391 None:intergenic
AGTTAAGGATAAAGGGGTTG+TGG 0.510351 tig0016935:+55471 Msa1360070:CDS
TGCTGAAGACCTTTATGACT+TGG 0.510954 tig0016935:+51656 Msa1360070:CDS
GTCGGTGTAAAGGACATCAT+TGG 0.511521 tig0016935:-50975 None:intergenic
CAACGCCATATGTGTTATCT+GGG 0.512122 tig0016935:-48296 None:intergenic
GTTCGAGGCAAAGCCATGGC+TGG 0.513782 tig0016935:+51630 Msa1360070:CDS
CATTAGCAATACATGGTTGT+GGG 0.515092 tig0016935:+54454 Msa1360070:CDS
CTCTTACAAAAGCCATAATC+GGG 0.515937 tig0016935:+54716 Msa1360070:CDS
CTCATACTTCAGTGGCTCAA+GGG 0.517232 tig0016935:-50390 None:intergenic
AAAGCCATAATCGGGACCAT+TGG 0.520667 tig0016935:+54724 Msa1360070:CDS
ATGAAGTTGCGCGTGAACTA+GGG 0.520837 tig0016935:+47571 Msa1360070:CDS
AGGATGCGGAGGCGCTCAGT+TGG 0.521313 tig0016935:-48715 None:intergenic
TCTCAACCAGATAATATACT+TGG 0.524955 tig0016935:+48155 Msa1360070:CDS
GGAATACCAGTGGAATCATT+GGG 0.526341 tig0016935:-47735 None:intergenic
AACCAAATCCGTGAATTGCT+GGG 0.526376 tig0016935:-48676 None:intergenic
GGCTTTGAAAACAGTTTCTG+TGG 0.526896 tig0016935:-49815 None:intergenic
AGTGAATGGGGATAGAACGG+AGG 0.527100 tig0016935:-47284 None:intergenic
AAAATCCTTGGTATTGGTGG+AGG 0.527503 tig0016935:-47895 None:intergenic
CAAACAATTCATTGATGCAA+TGG 0.528180 tig0016935:+55444 Msa1360070:CDS
AGCCAATCATTGCTGGAGAT+GGG 0.529241 tig0016935:+51486 Msa1360070:intron
TGGAATTGCAGCTGCAAGGA+TGG 0.529924 tig0016935:+52005 Msa1360070:CDS
GACACATTTAGGAAAGAAAA+CGG 0.531446 tig0016935:-47946 None:intergenic
CATTCACTCCCACCGCCGCA+AGG 0.531835 tig0016935:+47299 Msa1360070:CDS
ACTTACCCTGCAGGGGAAGG+GGG 0.532763 tig0016935:+49854 Msa1360070:CDS
CAGGGTAAGTCTCAACAATC+CGG 0.533571 tig0016935:-49841 None:intergenic
TGGGTATCACAGAGGAAGAA+AGG 0.534259 tig0016935:+54963 Msa1360070:CDS
CTGGGTGATGCCATTGTTGG+TGG 0.536156 tig0016935:+50025 Msa1360070:CDS
CAAAACTTAATGCAGCAGGC+TGG 0.536922 tig0016935:+52031 Msa1360070:CDS
TCTTATTACCACTCAGGATG+CGG 0.538854 tig0016935:-48729 None:intergenic
CAAATTGTTTGAAACGCCGT+TGG 0.539444 tig0016935:-51830 None:intergenic
CGGTGGAAGTTGAGAGGCTG+CGG 0.542126 tig0016935:-47351 None:intergenic
TCAAGAGCTTAGGCTTAAGC+AGG 0.542544 tig0016935:+50732 Msa1360070:CDS
TGTAGTCACATGATTGTTCG+AGG 0.543034 tig0016935:+51615 Msa1360070:CDS
GTCTTCAGCACGTCCAGCCA+TGG 0.544741 tig0016935:-51643 None:intergenic
AGCTCAGTTTCCAAGTCTAA+GGG 0.545572 tig0016935:-49926 None:intergenic
CGGCGGCGGAGGAGAGTCGG+AGG 0.546477 tig0016935:-47328 None:intergenic
AGAAACGAGGGAAGCTCTGG+TGG 0.546722 tig0016935:-47437 None:intergenic
TGATGTAGATGCGGCAAACA+AGG 0.548304 tig0016935:+55513 Msa1360070:CDS
CGAACACTATGTCGGTGTAA+AGG 0.548343 tig0016935:-50985 None:intergenic
AGCTATTGTGATTCCTACTC+AGG 0.548772 tig0016935:+53793 Msa1360070:CDS
TAAAGTAACTGTGCAAATGC+AGG 0.549237 tig0016935:+50508 Msa1360070:CDS
CTCGTGCTACTCAAGAGCTT+AGG 0.550757 tig0016935:+50722 Msa1360070:CDS
TTCTGAAGATGATATTCCTA+AGG 0.550957 tig0016935:+50102 Msa1360070:CDS
AAATTCAATTGTATTCATAG+AGG 0.555732 tig0016935:-50194 None:intergenic
CTCATCCCCAAACGAATCAA+AGG 0.557460 tig0016935:+49787 Msa1360070:CDS
GGAGAGAACCTTGCGGCGGT+GGG 0.557924 tig0016935:-47307 None:intergenic
AGAGGTTTCTCATACTTCAG+TGG 0.560168 tig0016935:-50398 None:intergenic
AGTATGTTGCGGTATATACT+GGG 0.560882 tig0016935:+54944 Msa1360070:intron
TTGTTGAGACTTACCCTGCA+GGG 0.561000 tig0016935:+49846 Msa1360070:CDS
GGGAGTGAATGGGGATAGAA+CGG 0.561215 tig0016935:-47287 None:intergenic
CTTGAGGTATATGATGGAAC+TGG 0.561746 tig0016935:+54658 Msa1360070:CDS
AGACTGGGTGATGCCATTGT+TGG 0.562349 tig0016935:+50022 Msa1360070:CDS
TAAAGCTTCTGGTGGATCAG+GGG 0.563010 tig0016935:-50758 None:intergenic
TCAACAAATGGTTCTTTGAG+AGG 0.563123 tig0016935:-47801 None:intergenic
TCATACTTCAGTGGCTCAAG+GGG 0.563562 tig0016935:-50389 None:intergenic
TTCTAACCCACCACCAACAA+TGG 0.567241 tig0016935:-50035 None:intergenic
ACCAAATCTTATTACCACTC+AGG 0.568657 tig0016935:-48735 None:intergenic
GTGAATGGGGATAGAACGGA+GGG 0.568796 tig0016935:-47283 None:intergenic
AGCTGCTCGTGAAGAAGCAA+CGG 0.568986 tig0016935:+50639 Msa1360070:CDS
ATTGTTGAGACTTACCCTGC+AGG 0.572358 tig0016935:+49845 Msa1360070:CDS
CTCTGAGAGAGAACAATACC+GGG 0.573068 tig0016935:+50218 Msa1360070:CDS
TGCGGCGGTGGGAGTGAATG+GGG 0.574016 tig0016935:-47296 None:intergenic
TTCAACCTTTGATTCGTTTG+GGG 0.574775 tig0016935:-49792 None:intergenic
GGCTGGATGTCAGAAAAGAT+GGG 0.574997 tig0016935:+52048 Msa1360070:CDS
TGATAAATATCACCGCTGAT+GGG 0.577228 tig0016935:+53657 Msa1360070:CDS
GATGCAAAACTTAATGCAGC+AGG 0.577530 tig0016935:+52027 Msa1360070:CDS
TTTCTTTCCTAAATGTGTCG+AGG 0.577640 tig0016935:+47950 Msa1360070:CDS
TTTCTGAATCATCTTCTACT+GGG 0.580482 tig0016935:+49959 Msa1360070:CDS
CAATTTAGCATTGGAATGAA+GGG 0.581968 tig0016935:+50076 Msa1360070:CDS
CAAATTTGTCCGTATTCGCA+AGG 0.584600 tig0016935:-53685 None:intergenic
CTCTGGTGGAGAAATGGTTG+CGG 0.585366 tig0016935:-47423 None:intergenic
TACCAAAACAGTGGTACCAA+AGG 0.585642 tig0016935:-51037 None:intergenic
TTCAACTTCAATGGAAAGAG+CGG 0.586601 tig0016935:+47216 Msa1360070:CDS
CCATTTGTTGAGTTACTCAA+AGG 0.586706 tig0016935:+47813 Msa1360070:CDS
TGGAAGTTGAGAGGCTGCGG+CGG 0.587110 tig0016935:-47348 None:intergenic
TTACAATGGACTGGAGCATG+AGG 0.589145 tig0016935:-50261 None:intergenic
CACATCATCAGTGCAGGGCA+AGG 0.591311 tig0016935:+51584 Msa1360070:CDS
TGATATCTCATCATCTCTTG+AGG 0.591893 tig0016935:+53598 Msa1360070:CDS
ACTCCTCCCAATGATTCCAC+TGG 0.593971 tig0016935:+47729 Msa1360070:CDS
GTTAGTGGTGGAGCTTATGG+AGG 0.594232 tig0016935:+54488 Msa1360070:CDS
AAATCCGTGAATTGCTGGGA+TGG 0.594543 tig0016935:-48672 None:intergenic
AAATCTAAAATAGCAAAGGA+AGG 0.598062 tig0016935:+50431 Msa1360070:CDS
TATCAACTTCCTGATGCCAA+AGG 0.598450 tig0016935:+54760 Msa1360070:CDS
CAGGATAAGTGAATGCATTG+AGG 0.599381 tig0016935:-47851 None:intergenic
GAAGAAAGGCAAAAGAGACG+TGG 0.599903 tig0016935:+54977 Msa1360070:CDS
CCTGAAATCTAAAATAGCAA+AGG 0.600462 tig0016935:+50427 Msa1360070:CDS
GAATTATTATATTATTGTAG+GGG 0.601351 tig0016935:+47117 Msa1360070:five_prime_UTR
TGGTGGTGGCGAAGTAGTGA+AGG 0.601630 tig0016935:+47548 Msa1360070:CDS
TAAGTCTCAACAATCCGGAC+TGG 0.602105 tig0016935:-49836 None:intergenic
ACAATAGCTTCATTTGTCAA+CGG 0.602200 tig0016935:-53779 None:intergenic
TAGAACCGGCTAAGAGGCAG+TGG 0.603061 tig0016935:+51979 Msa1360070:intron
TGGTATTGGTGGAGGCGACA+GGG 0.606318 tig0016935:-47887 None:intergenic
ATCTTGCGGTGGAAGTTGAG+AGG 0.617566 tig0016935:-47357 None:intergenic
GGAAATATAATGGAGATAGG+AGG 0.619140 tig0016935:+47178 Msa1360070:CDS
ATCTCCAGATGATGTAGATG+CGG 0.619830 tig0016935:+55504 Msa1360070:CDS
ATATCTTGAAGAGAAAGACT+AGG 0.619984 tig0016935:-50790 None:intergenic
GGAAGCAGTTAAGGATAAAG+GGG 0.620127 tig0016935:+55465 Msa1360070:CDS
TAAAGGGGTTGTGGTTGCAG+TGG 0.620471 tig0016935:+55480 Msa1360070:CDS
ATGTAGGTTGGGGATATCAA+CGG 0.621061 tig0016935:+50923 Msa1360070:intron
AAAGCAATGATAACCTCAGT+GGG 0.622193 tig0016935:-50835 None:intergenic
GAATGGGGATAGAACGGAGG+GGG 0.623314 tig0016935:-47281 None:intergenic
TGAATGGGGATAGAACGGAG+GGG 0.623959 tig0016935:-47282 None:intergenic
GTCAACTTAGGAATAACTTG+AGG 0.627900 tig0016935:-48333 None:intergenic
TTATAAGTGATATCTTCAGA+AGG 0.629909 tig0016935:-48020 None:intergenic
CCATTCACATCATCAGTGCA+GGG 0.631490 tig0016935:+51579 Msa1360070:CDS
TTAGATTTCAGGTCTTGGAG+AGG 0.632896 tig0016935:-50416 None:intergenic
AACACATATGGCGTTGACAG+CGG 0.635027 tig0016935:+48303 Msa1360070:CDS
GATTGTTCGAGGCAAAGCCA+TGG 0.636417 tig0016935:+51626 Msa1360070:CDS
ATAACCAGCATCATAAACGT+TGG 0.637210 tig0016935:-54396 None:intergenic
ATTGCTGGAGATGGGCACAA+AGG 0.637711 tig0016935:+51494 Msa1360070:CDS
TGTTGAGACTTACCCTGCAG+GGG 0.638158 tig0016935:+49847 Msa1360070:CDS
ACGTTCAATTTACAGACCAA+CGG 0.638686 tig0016935:+51814 Msa1360070:CDS
GAGCGCCTCCGCATCCTGAG+TGG 0.649913 tig0016935:+48721 Msa1360070:CDS
ATAGGAGTCTACATCCCCAA+TGG 0.650682 tig0016935:-54740 None:intergenic
TGCTGGGATGGTAATACTTG+CGG 0.652158 tig0016935:-48660 None:intergenic
AGAAGAAAGCAATCTTGCGG+TGG 0.653139 tig0016935:-47368 None:intergenic
ACACTGTGCTCTAAAATGTG+AGG 0.655510 tig0016935:-47756 None:intergenic
CCAGAGTAGAGCAAGAATGG+AGG 0.655893 tig0016935:+51857 Msa1360070:CDS
GTCATGGAATTGCAGCTGCA+AGG 0.656712 tig0016935:+52001 Msa1360070:CDS
GTTGTGTTTAATGAGATGAA+GGG 0.658075 tig0016935:+48125 Msa1360070:CDS
TGTCGCCTCCACCAATACCA+AGG 0.663038 tig0016935:+47890 Msa1360070:CDS
TACAATGGACTGGAGCATGA+GGG 0.669294 tig0016935:-50260 None:intergenic
TATTACCACTCAGGATGCGG+AGG 0.669703 tig0016935:-48726 None:intergenic
ACATATGGCGTTGACAGCGG+AGG 0.673297 tig0016935:+48306 Msa1360070:CDS
CATACCTGGAGAAGAAACGA+GGG 0.675730 tig0016935:-47449 None:intergenic
ACTCATGTCGAACACTATGT+CGG 0.676317 tig0016935:-50993 None:intergenic
ACCTATTCATGTTCCCACTG+AGG 0.677718 tig0016935:+50822 Msa1360070:CDS
CAAGCCACGAGGAAATGACC+CGG 0.678318 tig0016935:-50236 None:intergenic
TAAAATGTGAGGAATACCAG+TGG 0.680348 tig0016935:-47745 None:intergenic
GGGAGATGTATACACGATGG+AGG 0.682546 tig0016935:+47137 Msa1360070:exon
AGCCATAATCGGGACCATTG+GGG 0.686109 tig0016935:+54726 Msa1360070:CDS
GATCGTGTACGTGTTAGTGG+TGG 0.686533 tig0016935:+54476 Msa1360070:CDS
ACATACCTGGAGAAGAAACG+AGG 0.687833 tig0016935:-47450 None:intergenic
GAAAGCAATGATAACCTCAG+TGG 0.691309 tig0016935:-50836 None:intergenic
CGGAGGAGAGAACCTTGCGG+CGG 0.695662 tig0016935:-47311 None:intergenic
AGAAGAAGAAAGCAATCTTG+CGG 0.695847 tig0016935:-47371 None:intergenic
ATACCAGTGGAATCATTGGG+AGG 0.698254 tig0016935:-47732 None:intergenic
TAGGGGAGATGTATACACGA+TGG 0.703466 tig0016935:+47134 Msa1360070:exon
TGGATGTCAGAAAAGATGGG+TGG 0.705171 tig0016935:+52051 Msa1360070:CDS
TTGCATGATTACCAAAACAG+TGG 0.717400 tig0016935:-51046 None:intergenic
CGGTTACGAAAGTAAAAGAG+CGG 0.719946 tig0016935:-47403 None:intergenic
GGTGCGAGAGAAATATCTGG+TGG 0.721010 tig0016935:-47260 None:intergenic
AATACCGGGTCATTTCCTCG+TGG 0.737191 tig0016935:+50232 Msa1360070:CDS
AGCATGAGGGACAAGCCACG+AGG 0.739634 tig0016935:-50247 None:intergenic
AGTCGGAGGAGAGAACCTTG+CGG 0.746794 tig0016935:-47314 None:intergenic
GTATATACTGGGTATCACAG+AGG 0.779699 tig0016935:+54955 Msa1360070:CDS
GTGGAGAGATATTATCTACG+AGG 0.781070 tig0016935:+54996 Msa1360070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAATAAAATTT+GGG - tig0016935:54304-54323 None:intergenic 0.0%
!! AAATAAAATAAAATAAAATT+TGG - tig0016935:54305-54324 None:intergenic 0.0%
!! AGAATTATTATATTATTGTA+GGG + tig0016935:47116-47135 Msa1360070:five_prime_UTR 10.0%
!!! AATAATAATAATGATGATTT+TGG + tig0016935:47518-47537 Msa1360070:intron 10.0%
!! AAGAAAAAAAAACTATTTAT+AGG + tig0016935:53188-53207 Msa1360070:intron 10.0%
!! AACATAAAATTAGATTAAAA+AGG - tig0016935:53460-53479 None:intergenic 10.0%
!! AGAAATGAAAATTAATTATT+TGG + tig0016935:53941-53960 Msa1360070:intron 10.0%
!! TAAAATAATTATCTCAAAAT+AGG - tig0016935:55634-55653 None:intergenic 10.0%
!! AAAAATATTTGATATAAGAT+TGG + tig0016935:55778-55797 Msa1360070:three_prime_UTR 10.0%
!! GAGAATTATTATATTATTGT+AGG + tig0016935:47115-47134 Msa1360070:five_prime_UTR 15.0%
!! GAATTATTATATTATTGTAG+GGG + tig0016935:47117-47136 Msa1360070:five_prime_UTR 15.0%
!!! AGTTATTTTGTATCTTTTTT+TGG + tig0016935:49021-49040 Msa1360070:intron 15.0%
!!! GTTATTTTGTATCTTTTTTT+GGG + tig0016935:49022-49041 Msa1360070:intron 15.0%
!!! TTATTTTGTATCTTTTTTTG+GGG + tig0016935:49023-49042 Msa1360070:intron 15.0%
!! AATTCTTTATAATAGAGAAT+GGG - tig0016935:49079-49098 None:intergenic 15.0%
!!! ATTGATATTTACAATTGTTT+TGG + tig0016935:50329-50348 Msa1360070:intron 15.0%
!!! ATTCTATTTATTTTTCCTTT+TGG + tig0016935:51345-51364 Msa1360070:intron 15.0%
!! ATAAAAAAATAACATAAGAG+AGG - tig0016935:51466-51485 None:intergenic 15.0%
!! CAAATTACAGAATAAAAAAA+CGG - tig0016935:52529-52548 None:intergenic 15.0%
!! AAGAATTATAAATAGAATAG+CGG + tig0016935:53290-53309 Msa1360070:intron 15.0%
!!! AGGTAAAATTAGTTATTTTT+TGG + tig0016935:54097-54116 Msa1360070:intron 15.0%
!!! GGTAAAATTAGTTATTTTTT+GGG + tig0016935:54098-54117 Msa1360070:intron 15.0%
!!! GTAAAATTAGTTATTTTTTG+GGG + tig0016935:54099-54118 Msa1360070:intron 15.0%
!! ATTATAAAAATCCTTGGTAT+TGG - tig0016935:47904-47923 None:intergenic 20.0%
!!! TACCAAGGATTTTTATAATT+TGG + tig0016935:47905-47924 Msa1360070:CDS 20.0%
!! AACCAAATTATAAAAATCCT+TGG - tig0016935:47910-47929 None:intergenic 20.0%
!!! TTGGTAATTGAAATATAAAC+TGG - tig0016935:48203-48222 None:intergenic 20.0%
!!! AATTAAATCTTTGAAATAGC+TGG - tig0016935:48592-48611 None:intergenic 20.0%
!!! TTTAGTCATTCATTTTAATC+AGG - tig0016935:48839-48858 None:intergenic 20.0%
!! TTTATATTTGAGAAAGAATG+CGG - tig0016935:48969-48988 None:intergenic 20.0%
!!! AAATAACAAAGATAGCTTTA+TGG + tig0016935:48986-49005 Msa1360070:intron 20.0%
!!! TATTTTGTATCTTTTTTTGG+GGG + tig0016935:49024-49043 Msa1360070:intron 20.0%
!! CAATTCTTTATAATAGAGAA+TGG - tig0016935:49080-49099 None:intergenic 20.0%
!!! TTATGTTCTTTGAAATATTG+AGG + tig0016935:49136-49155 Msa1360070:intron 20.0%
!! AAAAACTATTAGGAAAGATT+TGG + tig0016935:49373-49392 Msa1360070:intron 20.0%
!! ATGCTAATTGAGAATATTAT+TGG + tig0016935:49613-49632 Msa1360070:intron 20.0%
!! TTGAGATATTGAACATTATT+AGG - tig0016935:49664-49683 None:intergenic 20.0%
!! AAATTCAATTGTATTCATAG+AGG - tig0016935:50197-50216 None:intergenic 20.0%
!! AAGATGAATTTCTCTATTAA+TGG - tig0016935:50476-50495 None:intergenic 20.0%
!! AAATGTAAAACATCTTTAAG+AGG - tig0016935:51072-51091 None:intergenic 20.0%
!! TTAAATATGCATGTAATGTT+AGG - tig0016935:51108-51127 None:intergenic 20.0%
!!! TACATGCATATTTAATTTCT+AGG + tig0016935:51113-51132 Msa1360070:intron 20.0%
!!! TTATTTTGTTATTCGAAACA+TGG + tig0016935:51155-51174 Msa1360070:intron 20.0%
!!! TTTACATGATGGAATATTTT+AGG - tig0016935:51745-51764 None:intergenic 20.0%
!!! TACCAAAATGTTTTATGTAA+AGG + tig0016935:51884-51903 Msa1360070:intron 20.0%
!!! ACAATGAGCATTTATAATTT+TGG - tig0016935:51911-51930 None:intergenic 20.0%
!! AACTTTGTGAACAATAAAAT+TGG - tig0016935:52331-52350 None:intergenic 20.0%
!!! ATTTTTACCAAAAATGTTAG+TGG + tig0016935:52573-52592 Msa1360070:intron 20.0%
!!! TTTTATGTTTAATGCTGAAA+TGG + tig0016935:53471-53490 Msa1360070:intron 20.0%
!!! TCTTGTGTACATAATTTTAA+AGG + tig0016935:53838-53857 Msa1360070:intron 20.0%
!! TTTAAAGGAAATATCCAAAT+CGG + tig0016935:53853-53872 Msa1360070:intron 20.0%
!! TAAGAATGTCAAATGTAAAA+TGG + tig0016935:53968-53987 Msa1360070:intron 20.0%
!! AAAAAAAGAATGTCAAATGT+AGG + tig0016935:54077-54096 Msa1360070:intron 20.0%
!! TTCATTTCTTAGAAACATAT+AGG + tig0016935:54186-54205 Msa1360070:intron 20.0%
!! CATAACATAAACTAAATTGT+AGG - tig0016935:54250-54269 None:intergenic 20.0%
!! TAAAATAAAATTTGGGCTTT+AGG - tig0016935:54297-54316 None:intergenic 20.0%
!!! TTTCTTTATTTGAAAGAAGT+TGG - tig0016935:55545-55564 None:intergenic 20.0%
!! AAGTAAATCCTGAATTTAAA+GGG - tig0016935:55569-55588 None:intergenic 20.0%
!! AAAGTAAATCCTGAATTTAA+AGG - tig0016935:55570-55589 None:intergenic 20.0%
!! AATATTTGATATAAGATTGG+CGG + tig0016935:55781-55800 Msa1360070:three_prime_UTR 20.0%
! TAGGATTAATTCAACTTCAA+TGG + tig0016935:47207-47226 Msa1360070:CDS 25.0%
!!! ATGATGATTTTGGTAGATAT+TGG + tig0016935:47528-47547 Msa1360070:intron 25.0%
! TTATAAGTGATATCTTCAGA+AGG - tig0016935:48023-48042 None:intergenic 25.0%
! TCTGAAGATATCACTTATAA+AGG + tig0016935:48023-48042 Msa1360070:CDS 25.0%
! AGAGATAACTAATTTGAACA+AGG + tig0016935:48417-48436 Msa1360070:intron 25.0%
! ATAACTAATTTGAACAAGGA+GGG + tig0016935:48421-48440 Msa1360070:intron 25.0%
!!! ATTGATTTTTGTAGTATGCT+GGG + tig0016935:48487-48506 Msa1360070:intron 25.0%
!! TCATTTTAAACTCAATTGAC+AGG + tig0016935:48630-48649 Msa1360070:intron 25.0%
!! AAATGAATGACTAAAGCATT+TGG + tig0016935:48844-48863 Msa1360070:intron 25.0%
! ATAACTATAAAGACCTAACT+TGG - tig0016935:48923-48942 None:intergenic 25.0%
! TTATATTTGAGAAAGAATGC+GGG - tig0016935:48968-48987 None:intergenic 25.0%
!! TCTTTCCTAATAGTTTTTCT+AGG - tig0016935:49371-49390 None:intergenic 25.0%
! AGATTTGGAAATTAATGAGT+TGG + tig0016935:49388-49407 Msa1360070:intron 25.0%
! TGTGAATACACTTAAAAAGT+TGG + tig0016935:50138-50157 Msa1360070:CDS 25.0%
!!! TAAGATCAGCTAAAGTTTTT+TGG + tig0016935:50281-50300 Msa1360070:intron 25.0%
!!! TTGTTTTGGTTTGCATATTT+AGG + tig0016935:50343-50362 Msa1360070:intron 25.0%
!!! TGTTTTGGTTTGCATATTTA+GGG + tig0016935:50344-50363 Msa1360070:intron 25.0%
!! AAATCTAAAATAGCAAAGGA+AGG + tig0016935:50431-50450 Msa1360070:CDS 25.0%
! TTAACATATTGAGTGCAAAA+TGG - tig0016935:50578-50597 None:intergenic 25.0%
! ACTACTTGAATGTTAAATGT+AGG + tig0016935:50907-50926 Msa1360070:intron 25.0%
! TTGAATGTTAAATGTAGGTT+GGG + tig0016935:50912-50931 Msa1360070:intron 25.0%
!!! TGTTTTACATTTTGTTTCCA+TGG + tig0016935:51080-51099 Msa1360070:intron 25.0%
!!! TTCTAGGATAGCAATTTAAT+CGG + tig0016935:51129-51148 Msa1360070:intron 25.0%
! AGAAGAATAAAAACACCAAA+AGG - tig0016935:51363-51382 None:intergenic 25.0%
!! TTGTCATTTATCTATCAAGA+AGG - tig0016935:51414-51433 None:intergenic 25.0%
! TCCAACTAAACCAATTAATT+GGG + tig0016935:51529-51548 Msa1360070:CDS 25.0%
! AAAAATGTACCAAGTCATAA+AGG - tig0016935:51668-51687 None:intergenic 25.0%
!! AAGATGAAATGTTTGAAGTT+TGG - tig0016935:51695-51714 None:intergenic 25.0%
! TGAAATTAGGATTTACATGA+TGG - tig0016935:51756-51775 None:intergenic 25.0%
!! GTCCTTTACATAAAACATTT+TGG - tig0016935:51889-51908 None:intergenic 25.0%
!! TTTTTGTCTTTTGTTAGAAC+CGG + tig0016935:51965-51984 Msa1360070:intron 25.0%
! ATCCTCATATTAAACCATAA+AGG - tig0016935:52100-52119 None:intergenic 25.0%
!! TTTTATTGTTCACAAAGTTG+TGG + tig0016935:52332-52351 Msa1360070:intron 25.0%
!! CGTATCAATAACAGTTTTTA+GGG - tig0016935:52417-52436 None:intergenic 25.0%
!! ACGTATCAATAACAGTTTTT+AGG - tig0016935:52418-52437 None:intergenic 25.0%
!! CAATTAACCACTAACATTTT+TGG - tig0016935:52583-52602 None:intergenic 25.0%
! CATATACATGTGAATTTGAT+AGG + tig0016935:52856-52875 Msa1360070:intron 25.0%
! ATAGGAAAATCGTAAATTGT+AGG - tig0016935:52904-52923 None:intergenic 25.0%
!! ATTTTCCTATAAACGATCTT+AGG + tig0016935:52914-52933 Msa1360070:intron 25.0%
! AAATTAAAGAATACGCACAT+AGG - tig0016935:53088-53107 None:intergenic 25.0%
!! TTTTTGCATTTATAGATACG+AGG + tig0016935:53235-53254 Msa1360070:intron 25.0%
! AATCCATTCTTGTCATAATA+AGG + tig0016935:53357-53376 Msa1360070:intron 25.0%
! ATCCATTCTTGTCATAATAA+GGG + tig0016935:53358-53377 Msa1360070:intron 25.0%
! ATATAATCAATGCATACAAC+AGG - tig0016935:53507-53526 None:intergenic 25.0%
!!! GTATGCATTGATTATATTTC+TGG + tig0016935:53510-53529 Msa1360070:intron 25.0%
! AAAAGAGAATTGATCAAGAT+TGG + tig0016935:53573-53592 Msa1360070:CDS 25.0%
! AAAGAGAATTGATCAAGATT+GGG + tig0016935:53574-53593 Msa1360070:CDS 25.0%
! AAAATTATGTACAACCGATT+TGG - tig0016935:53870-53889 None:intergenic 25.0%
! AAGTAAATATCCAAATTGTC+CGG + tig0016935:53891-53910 Msa1360070:intron 25.0%
! TACTTAAGAATGTCTAATGT+GGG - tig0016935:54152-54171 None:intergenic 25.0%
! ATACTTAAGAATGTCTAATG+TGG - tig0016935:54153-54172 None:intergenic 25.0%
! GACATTCTTAAGTATCAAAT+TGG + tig0016935:54158-54177 Msa1360070:intron 25.0%
! AGAAACATGAGTTATAGATA+GGG - tig0016935:54346-54365 None:intergenic 25.0%
! AAGAAACATGAGTTATAGAT+AGG - tig0016935:54347-54366 None:intergenic 25.0%
! TTTCTACAGGTTAATTATGT+TGG + tig0016935:54365-54384 Msa1360070:intron 25.0%
! TTCTACAGGTTAATTATGTT+GGG + tig0016935:54366-54385 Msa1360070:intron 25.0%
! AGGTAACTTCTATTATACTT+AGG + tig0016935:54535-54554 Msa1360070:intron 25.0%
! AATAAAAAAGCAGCATGATT+TGG - tig0016935:54887-54906 None:intergenic 25.0%
!! ATTTCATTTTCAGTATGTTG+CGG + tig0016935:54933-54952 Msa1360070:intron 25.0%
!! CATTCTGGAAAATTATCTTT+AGG - tig0016935:55242-55261 None:intergenic 25.0%
!! TGATAGATATATTTTGCAAG+AGG + tig0016935:55280-55299 Msa1360070:intron 25.0%
!! GATAGATATATTTTGCAAGA+GGG + tig0016935:55281-55300 Msa1360070:intron 25.0%
! AACTGAATAAGAACAACTAA+TGG - tig0016935:55392-55411 None:intergenic 25.0%
!!! GGCTTCTTTTATTTTTTTGA+CGG + tig0016935:55802-55821 Msa1360070:three_prime_UTR 25.0%
! TTTGACGGTTATAAAAATGT+TGG + tig0016935:55817-55836 Msa1360070:three_prime_UTR 25.0%
ACGAGTTATCGGAAATATAA+TGG + tig0016935:47168-47187 Msa1360070:CDS 30.0%
! ATCGGAAATATAATGGAGAT+AGG + tig0016935:47175-47194 Msa1360070:CDS 30.0%
AATAGATAGAGATACATACC+TGG - tig0016935:47466-47485 None:intergenic 30.0%
!! ATGATTTTGGTAGATATTGG+TGG + tig0016935:47531-47550 Msa1360070:intron 30.0%
! ATAAAAATCCTTGGTATTGG+TGG - tig0016935:47901-47920 None:intergenic 30.0%
GACACATTTAGGAAAGAAAA+CGG - tig0016935:47949-47968 None:intergenic 30.0%
TGTTGTGTTTAATGAGATGA+AGG + tig0016935:48124-48143 Msa1360070:CDS 30.0%
GTTGTGTTTAATGAGATGAA+GGG + tig0016935:48125-48144 Msa1360070:CDS 30.0%
TCTCAACCAGATAATATACT+TGG + tig0016935:48155-48174 Msa1360070:CDS 30.0%
TTACAAAAAAATGTCGCAGT+TGG - tig0016935:48222-48241 None:intergenic 30.0%
!! TATTCCTAAGTTGACTTTTG+AGG + tig0016935:48341-48360 Msa1360070:CDS 30.0%
AATTCCTCAAAAGTCAACTT+AGG - tig0016935:48348-48367 None:intergenic 30.0%
!! GTTGACTTTTGAGGAATTTA+AGG + tig0016935:48350-48369 Msa1360070:CDS 30.0%
GATAACTAATTTGAACAAGG+AGG + tig0016935:48420-48439 Msa1360070:intron 30.0%
!!! CATTGATTTTTGTAGTATGC+TGG + tig0016935:48486-48505 Msa1360070:intron 30.0%
GTAAAATCGTACATCTTTGT+AGG + tig0016935:48509-48528 Msa1360070:intron 30.0%
ACGAAGGTAAAAAAGTTACA+AGG - tig0016935:48543-48562 None:intergenic 30.0%
!!! AATTCACGGATTTGGTTTTA+TGG + tig0016935:48682-48701 Msa1360070:CDS 30.0%
TAAATGTTGAGACTGAGAAT+TGG + tig0016935:48771-48790 Msa1360070:intron 30.0%
AAATGTTGAGACTGAGAATT+GGG + tig0016935:48772-48791 Msa1360070:intron 30.0%
!! TTCATTTTAATCAGGAGTCT+GGG - tig0016935:48831-48850 None:intergenic 30.0%
!! ATTCATTTTAATCAGGAGTC+TGG - tig0016935:48832-48851 None:intergenic 30.0%
! GACAATGATCAGGATATTTT+TGG + tig0016935:48894-48913 Msa1360070:intron 30.0%
!!! ATATTTTTGGTAGCCAAGTT+AGG + tig0016935:48907-48926 Msa1360070:intron 30.0%
GAAGACCTAGAAAAACTATT+AGG + tig0016935:49363-49382 Msa1360070:intron 30.0%
! TAATGAGTTGGACCAAAATA+TGG + tig0016935:49400-49419 Msa1360070:intron 30.0%
GATAAATCTAGGAACATAAG+AGG - tig0016935:49558-49577 None:intergenic 30.0%
TGAGAATATTATTGGCATCA+TGG + tig0016935:49621-49640 Msa1360070:intron 30.0%
AGATAAGAGACTTAAGTTAG+CGG - tig0016935:49733-49752 None:intergenic 30.0%
! TTTTCTGAATCATCTTCTAC+TGG + tig0016935:49958-49977 Msa1360070:CDS 30.0%
TTTCTGAATCATCTTCTACT+GGG + tig0016935:49959-49978 Msa1360070:CDS 30.0%
! TCTAGCAAAATTTTTCTGAG+TGG - tig0016935:49998-50017 None:intergenic 30.0%
TTCATTCCAATGCTAAATTG+AGG - tig0016935:50076-50095 None:intergenic 30.0%
! TCAATTTAGCATTGGAATGA+AGG + tig0016935:50075-50094 Msa1360070:CDS 30.0%
! CAATTTAGCATTGGAATGAA+GGG + tig0016935:50076-50095 Msa1360070:CDS 30.0%
! TTCTGAAGATGATATTCCTA+AGG + tig0016935:50102-50121 Msa1360070:CDS 30.0%
! CTTAAAAAGTTGGTTGAAGA+AGG + tig0016935:50148-50167 Msa1360070:CDS 30.0%
AACTTTAGCTGATCTTACAA+TGG - tig0016935:50278-50297 None:intergenic 30.0%
!!! AAGTTTTTTGGTGTGTGAAA+TGG + tig0016935:50293-50312 Msa1360070:intron 30.0%
! GTTTGCATATTTAGGGTAAA+TGG + tig0016935:50351-50370 Msa1360070:intron 30.0%
!! CTATTTTAGATTTCAGGTCT+TGG - tig0016935:50424-50443 None:intergenic 30.0%
!!! CCTTTGCTATTTTAGATTTC+AGG - tig0016935:50430-50449 None:intergenic 30.0%
! CCTGAAATCTAAAATAGCAA+AGG + tig0016935:50427-50446 Msa1360070:CDS 30.0%
! TTTGCACAGTTACTTTATGA+AGG - tig0016935:50505-50524 None:intergenic 30.0%
ATATCTTGAAGAGAAAGACT+AGG - tig0016935:50793-50812 None:intergenic 30.0%
GAACATGAATAGGTTCTTTA+GGG - tig0016935:50816-50835 None:intergenic 30.0%
CTTGAATGTTAAATGTAGGT+TGG + tig0016935:50911-50930 Msa1360070:intron 30.0%
TGAATGTTAAATGTAGGTTG+GGG + tig0016935:50913-50932 Msa1360070:intron 30.0%
AATATGCTTTGTCTCCTTAT+AGG + tig0016935:51210-51229 Msa1360070:intron 30.0%
ACAATAGCATGAAACCTATA+AGG - tig0016935:51227-51246 None:intergenic 30.0%
AGACAATCCAGTAAAGAATT+TGG - tig0016935:51288-51307 None:intergenic 30.0%
! TTTTTATAGCCAATCATTGC+TGG + tig0016935:51479-51498 Msa1360070:intron 30.0%
GTCCAACTAAACCAATTAAT+TGG + tig0016935:51528-51547 Msa1360070:CDS 30.0%
! TCCCAATTAATTGGTTTAGT+TGG - tig0016935:51533-51552 None:intergenic 30.0%
! CAGTTTTTCTCCCAATTAAT+TGG - tig0016935:51542-51561 None:intergenic 30.0%
CAATTAATTGGGAGAAAAAC+TGG + tig0016935:51540-51559 Msa1360070:CDS 30.0%
CACTCAATACTTTGCATTAT+TGG + tig0016935:51719-51738 Msa1360070:intron 30.0%
! AAAATTGATAATCAGCATGG+AGG - tig0016935:51940-51959 None:intergenic 30.0%
! CACAAAATTGATAATCAGCA+TGG - tig0016935:51943-51962 None:intergenic 30.0%
!!! GGAATTTTAAGATGCCTTTA+TGG + tig0016935:52083-52102 Msa1360070:intron 30.0%
TGCCTTTATGGTTTAATATG+AGG + tig0016935:52095-52114 Msa1360070:intron 30.0%
TTCATCCATTCATAGTTGTT+AGG + tig0016935:52138-52157 Msa1360070:intron 30.0%
TGAACAATAAAATTGGCAGA+CGG - tig0016935:52324-52343 None:intergenic 30.0%
TTTGACCTAAGATCGTTTAT+AGG - tig0016935:52922-52941 None:intergenic 30.0%
AGGTCAAAAGAGACTTATTT+AGG + tig0016935:52934-52953 Msa1360070:intron 30.0%
!!! ATATTTTTTTCCCCTTCTTC+TGG + tig0016935:52971-52990 Msa1360070:intron 30.0%
!!! TATTTTTTTCCCCTTCTTCT+GGG + tig0016935:52972-52991 Msa1360070:intron 30.0%
!! TTCTCTTTTCAAGAGTTTGA+AGG - tig0016935:53562-53581 None:intergenic 30.0%
! AAAACTGTATTTTCCAAGCA+AGG + tig0016935:53629-53648 Msa1360070:CDS 30.0%
! AAACTGTATTTTCCAAGCAA+GGG + tig0016935:53630-53649 Msa1360070:CDS 30.0%
!! CAAATATTTGGTGTAGCAAT+GGG - tig0016935:53746-53765 None:intergenic 30.0%
AGTCTAACGTTCCAAATATT+TGG - tig0016935:53758-53777 None:intergenic 30.0%
ACAATAGCTTCATTTGTCAA+CGG - tig0016935:53782-53801 None:intergenic 30.0%
!!! AATAGGTCTCTAGTTTTTTC+CGG - tig0016935:53913-53932 None:intergenic 30.0%
TTCATTTCTTGTAGACCAAT+AGG - tig0016935:53930-53949 None:intergenic 30.0%
ATGTCAAATGTAAAATGGCT+TGG + tig0016935:53973-53992 Msa1360070:intron 30.0%
TGTCAAATGTAAAATGGCTT+GGG + tig0016935:53974-53993 Msa1360070:intron 30.0%
TTATGTTATGCACTTTGTAC+AGG + tig0016935:54260-54279 Msa1360070:intron 30.0%
TAACTCATGTTTCTTTCTAC+AGG + tig0016935:54352-54371 Msa1360070:intron 30.0%
CCATGTATTGCTAATGTATT+TGG - tig0016935:54450-54469 None:intergenic 30.0%
CCAAATACATTAGCAATACA+TGG + tig0016935:54447-54466 Msa1360070:CDS 30.0%
!! TGTGATTTTGATACACATTC+AGG + tig0016935:54515-54534 Msa1360070:CDS 30.0%
!!! TCAAGTGTTTTTAGCAAGTT+GGG - tig0016935:54643-54662 None:intergenic 30.0%
AAAACACTTGAGGTATATGA+TGG + tig0016935:54652-54671 Msa1360070:CDS 30.0%
ACTCTTACAAAAGCCATAAT+CGG + tig0016935:54715-54734 Msa1360070:CDS 30.0%
TTCATACCTACTATAACCTT+TGG - tig0016935:54779-54798 None:intergenic 30.0%
! GCATGATTTGGAAATTTAGA+AGG - tig0016935:54875-54894 None:intergenic 30.0%
! TTTTGCTTTATCAATAGCAG+TGG - tig0016935:55072-55091 None:intergenic 30.0%
! GATAATTTTCCAGAATGTGA+TGG + tig0016935:55245-55264 Msa1360070:intron 30.0%
CAAACAATTCATTGATGCAA+TGG + tig0016935:55444-55463 Msa1360070:CDS 30.0%
AAAGAAAGCCCTTTAAATTC+AGG + tig0016935:55558-55577 Msa1360070:exon 30.0%
AATTCAGGATTTACTTTGCA+AGG + tig0016935:55573-55592 Msa1360070:exon 30.0%
AGGCAGTATAAACGAGTTAT+CGG + tig0016935:47157-47176 Msa1360070:CDS 35.0%
! GGAAATATAATGGAGATAGG+AGG + tig0016935:47178-47197 Msa1360070:CDS 35.0%
TTCAACTTCAATGGAAAGAG+CGG + tig0016935:47216-47235 Msa1360070:CDS 35.0%
AGAAGAAGAAAGCAATCTTG+CGG - tig0016935:47374-47393 None:intergenic 35.0%
!! ATTTTGGTAGATATTGGTGG+TGG + tig0016935:47534-47553 Msa1360070:intron 35.0%
!!! ACTGCTTTTGATTTGCATTC+TGG - tig0016935:47624-47643 None:intergenic 35.0%
AACGATGAGAACAAAGTCTT+TGG + tig0016935:47693-47712 Msa1360070:CDS 35.0%
! AAGTCTTTGGCATTGTTTTC+CGG + tig0016935:47706-47725 Msa1360070:CDS 35.0%
TAAAATGTGAGGAATACCAG+TGG - tig0016935:47748-47767 None:intergenic 35.0%
TCAACAAATGGTTCTTTGAG+AGG - tig0016935:47804-47823 None:intergenic 35.0%
CCTTTGAGTAACTCAACAAA+TGG - tig0016935:47816-47835 None:intergenic 35.0%
! CCATTTGTTGAGTTACTCAA+AGG + tig0016935:47813-47832 Msa1360070:CDS 35.0%
ATGCATTCACTTATCCTGAT+AGG + tig0016935:47856-47875 Msa1360070:CDS 35.0%
TTTCTTTCCTAAATGTGTCG+AGG + tig0016935:47950-47969 Msa1360070:CDS 35.0%
ATCTCATTAAACACAACACC+TGG - tig0016935:48122-48141 None:intergenic 35.0%
AAGCTCTGTGCATTCATTAT+TGG + tig0016935:48245-48264 Msa1360070:intron 35.0%
! CTTTTCCCAGATAACACATA+TGG + tig0016935:48291-48310 Msa1360070:CDS 35.0%
GTCAACTTAGGAATAACTTG+AGG - tig0016935:48336-48355 None:intergenic 35.0%
GGGAATTCTGTTTAGTTGTT+AGG + tig0016935:48441-48460 Msa1360070:intron 35.0%
ATCTACAGTAGACTATACGA+AGG - tig0016935:48559-48578 None:intergenic 35.0%
TCCTGAGTGGTAATAAGATT+TGG + tig0016935:48734-48753 Msa1360070:intron 35.0%
ACCAAATCTTATTACCACTC+AGG - tig0016935:48738-48757 None:intergenic 35.0%
AATGTTGAGACTGAGAATTG+GGG + tig0016935:48773-48792 Msa1360070:intron 35.0%
CCTGATCATTGTCATAGAAT+GGG - tig0016935:48887-48906 None:intergenic 35.0%
TCCTGATCATTGTCATAGAA+TGG - tig0016935:48888-48907 None:intergenic 35.0%
!! GTTCTTTGAAATATTGAGGC+AGG + tig0016935:49140-49159 Msa1360070:intron 35.0%
TTGATCTACTCTCCTTACTA+CGG - tig0016935:49312-49331 None:intergenic 35.0%
AGTAAGGAGAGTAGATCAAA+TGG + tig0016935:49313-49332 Msa1360070:intron 35.0%
! GTCTATCATGCACCATATTT+TGG - tig0016935:49415-49434 None:intergenic 35.0%
! AACCAAGTCTTTTCCCATAA+TGG - tig0016935:49437-49456 None:intergenic 35.0%
ACAATTCAGGATCTTCAACA+GGG - tig0016935:49525-49544 None:intergenic 35.0%
TTCCTAGATTTATCTTCCTC+TGG + tig0016935:49564-49583 Msa1360070:intron 35.0%
AGTGAACAATATAAGTCCAG+AGG - tig0016935:49583-49602 None:intergenic 35.0%
ATATTATTGGCATCATGGCA+TGG + tig0016935:49626-49645 Msa1360070:intron 35.0%
! TTCAACCTTTGATTCGTTTG+GGG - tig0016935:49795-49814 None:intergenic 35.0%
! GTTCAACCTTTGATTCGTTT+GGG - tig0016935:49796-49815 None:intergenic 35.0%
! AATTTTGCTAGAAAGCAGAC+TGG + tig0016935:50006-50025 Msa1360070:CDS 35.0%
! ATTTTGCTAGAAAGCAGACT+GGG + tig0016935:50007-50026 Msa1360070:CDS 35.0%
ACAATCAGTTCTTCTACCTT+AGG - tig0016935:50121-50140 None:intergenic 35.0%
! TTTTGATACAGATGCCATTG+AGG + tig0016935:50171-50190 Msa1360070:CDS 35.0%
TAAAGTAACTGTGCAAATGC+AGG + tig0016935:50508-50527 Msa1360070:CDS 35.0%
! GAAAACTTTTCATTGTCAGC+CGG + tig0016935:50606-50625 Msa1360070:intron 35.0%
AAGTATGACAACAGAAGATC+TGG + tig0016935:50690-50709 Msa1360070:CDS 35.0%
!!! ACAGTTTTTAAAGCTTCTGG+TGG - tig0016935:50769-50788 None:intergenic 35.0%
!!! GGAACAGTTTTTAAAGCTTC+TGG - tig0016935:50772-50791 None:intergenic 35.0%
GGAACATGAATAGGTTCTTT+AGG - tig0016935:50817-50836 None:intergenic 35.0%
AAAGCAATGATAACCTCAGT+GGG - tig0016935:50838-50857 None:intergenic 35.0%
TTGCATGATTACCAAAACAG+TGG - tig0016935:51049-51068 None:intergenic 35.0%
ATCCAGTAAAGAATTTGGCT+AGG - tig0016935:51283-51302 None:intergenic 35.0%
ATTCCTCATCACGTGTATAT+TGG + tig0016935:51383-51402 Msa1360070:intron 35.0%
TTAATTGGGAGAAAAACTGG+AGG + tig0016935:51543-51562 Msa1360070:CDS 35.0%
TTCAGTAGCAGTGTGAAATT+AGG - tig0016935:51769-51788 None:intergenic 35.0%
CTTGAAGAACAGAATTAACC+TGG - tig0016935:51794-51813 None:intergenic 35.0%
ACGTTCAATTTACAGACCAA+CGG + tig0016935:51814-51833 Msa1360070:CDS 35.0%
TGATACGTTGCATTTCACTT+TGG + tig0016935:52430-52449 Msa1360070:intron 35.0%
CATAATCCAATTGGTATCAG+AGG - tig0016935:53019-53038 None:intergenic 35.0%
CTCTGATACCAATTGGATTA+TGG + tig0016935:53017-53036 Msa1360070:intron 35.0%
CTATGTTCCAATACTCCAAT+TGG - tig0016935:53050-53069 None:intergenic 35.0%
AGCCCTTATTATGACAAGAA+TGG - tig0016935:53363-53382 None:intergenic 35.0%
GTCAACTTATTATGACACCT+AGG + tig0016935:53393-53412 Msa1360070:intron 35.0%
CAAGAGTTTGAAGGAATTCA+AGG - tig0016935:53553-53572 None:intergenic 35.0%
TGATATCTCATCATCTCTTG+AGG + tig0016935:53598-53617 Msa1360070:CDS 35.0%
TTGATAAATATCACCGCTGA+TGG + tig0016935:53656-53675 Msa1360070:CDS 35.0%
TGATAAATATCACCGCTGAT+GGG + tig0016935:53657-53676 Msa1360070:CDS 35.0%
!! CCAAATATTTGGTGTAGCAA+TGG - tig0016935:53747-53766 None:intergenic 35.0%
CCATTGCTACACCAAATATT+TGG + tig0016935:53744-53763 Msa1360070:CDS 35.0%
GAAATAATCCTTACCTGAGT+AGG - tig0016935:53809-53828 None:intergenic 35.0%
!!! CTAGTTTTTTCCGGACAATT+TGG - tig0016935:53904-53923 None:intergenic 35.0%
GGAAAAAACTAGAGACCTAT+TGG + tig0016935:53912-53931 Msa1360070:intron 35.0%
TGTGGGTCAAATTATTCTCA+AGG - tig0016935:54135-54154 None:intergenic 35.0%
TTGATCCCTGACAAAAAACA+TGG - tig0016935:54215-54234 None:intergenic 35.0%
ATAACCAGCATCATAAACGT+TGG - tig0016935:54399-54418 None:intergenic 35.0%
! GATGCTGGTTATAAGCTTAA+TGG + tig0016935:54407-54426 Msa1360070:CDS 35.0%
ACATTAGCAATACATGGTTG+TGG + tig0016935:54453-54472 Msa1360070:CDS 35.0%
CATTAGCAATACATGGTTGT+GGG + tig0016935:54454-54473 Msa1360070:CDS 35.0%
! ACCTTTTCGCTTCTTTTTCT+AGG + tig0016935:54589-54608 Msa1360070:intron 35.0%
TCCTAGAAAAAGAAGCGAAA+AGG - tig0016935:54593-54612 None:intergenic 35.0%
!!! CTCAAGTGTTTTTAGCAAGT+TGG - tig0016935:54644-54663 None:intergenic 35.0%
!! CAACTTGCTAAAAACACTTG+AGG + tig0016935:54642-54661 Msa1360070:CDS 35.0%
TGGTGACTTCTTAAGAGAAT+TGG + tig0016935:54678-54697 Msa1360070:CDS 35.0%
CTCTTACAAAAGCCATAATC+GGG + tig0016935:54716-54735 Msa1360070:CDS 35.0%
AGTATGTTGCGGTATATACT+GGG + tig0016935:54944-54963 Msa1360070:intron 35.0%
AAAAGGTCATGTATCATGCA+TGG - tig0016935:55046-55065 None:intergenic 35.0%
ATCAATAGCAGTGGATCAAA+AGG - tig0016935:55063-55082 None:intergenic 35.0%
TGTAATCAGAAAGTCGTTTC+AGG - tig0016935:55152-55171 None:intergenic 35.0%
! ATTTTATTCCCTCAGCTTGA+AGG + tig0016935:55417-55436 Msa1360070:intron 35.0%
ATGGAAGCAGTTAAGGATAA+AGG + tig0016935:55463-55482 Msa1360070:CDS 35.0%
TGGAAGCAGTTAAGGATAAA+GGG + tig0016935:55464-55483 Msa1360070:CDS 35.0%
CGGTTACGAAAGTAAAAGAG+CGG - tig0016935:47406-47425 None:intergenic 40.0%
! CTTTTCAAACACGTCAAGAC+AGG + tig0016935:47645-47664 Msa1360070:CDS 40.0%
GGAATACCAGTGGAATCATT+GGG - tig0016935:47738-47757 None:intergenic 40.0%
AGGAATACCAGTGGAATCAT+TGG - tig0016935:47739-47758 None:intergenic 40.0%
!! ACACTGTGCTCTAAAATGTG+AGG - tig0016935:47759-47778 None:intergenic 40.0%
! TTAGAGCACAGTGTTTTGTG+TGG + tig0016935:47765-47784 Msa1360070:CDS 40.0%
CAGGATAAGTGAATGCATTG+AGG - tig0016935:47854-47873 None:intergenic 40.0%
!! AAAATCCTTGGTATTGGTGG+AGG - tig0016935:47898-47917 None:intergenic 40.0%
TGAACATCCTCGACACATTT+AGG - tig0016935:47960-47979 None:intergenic 40.0%
! GGATGTTCAGACTTTTCAAC+AGG + tig0016935:47971-47990 Msa1360070:CDS 40.0%
! TGTTCAGACTTTTCAACAGG+AGG + tig0016935:47974-47993 Msa1360070:CDS 40.0%
! GTTCAGACTTTTCAACAGGA+GGG + tig0016935:47975-47994 Msa1360070:CDS 40.0%
! CAATGCTTTTCACTCATTCC+AGG + tig0016935:48101-48120 Msa1360070:intron 40.0%
GCTCGTCCAAGTATATTATC+TGG - tig0016935:48164-48183 None:intergenic 40.0%
GGTGTATGTAACTTTGTTGC+AGG + tig0016935:48266-48285 Msa1360070:intron 40.0%
CAACGCCATATGTGTTATCT+GGG - tig0016935:48299-48318 None:intergenic 40.0%
TCAACGCCATATGTGTTATC+TGG - tig0016935:48300-48319 None:intergenic 40.0%
ATTACCATCCCAGCAATTCA+CGG + tig0016935:48668-48687 Msa1360070:CDS 40.0%
AACCAAATCCGTGAATTGCT+GGG - tig0016935:48679-48698 None:intergenic 40.0%
AAACCAAATCCGTGAATTGC+TGG - tig0016935:48680-48699 None:intergenic 40.0%
TCTTATTACCACTCAGGATG+CGG - tig0016935:48732-48751 None:intergenic 40.0%
!! ATCTACAAGGGCATCACAAA+TGG - tig0016935:48803-48822 None:intergenic 40.0%
CCCATTCTATGACAATGATC+AGG + tig0016935:48884-48903 Msa1360070:intron 40.0%
ATTTGAGAAAGAATGCGGGA+GGG - tig0016935:48964-48983 None:intergenic 40.0%
TATTTGAGAAAGAATGCGGG+AGG - tig0016935:48965-48984 None:intergenic 40.0%
!! AGATGGTGGAAAACAGACTT+AGG + tig0016935:49252-49271 Msa1360070:intron 40.0%
GACCTATAGATTCCGTAGTA+AGG + tig0016935:49297-49316 Msa1360070:intron 40.0%
CTCCTTACTACGGAATCTAT+AGG - tig0016935:49302-49321 None:intergenic 40.0%
AAGGAGAGTAGATCAAATGG+AGG + tig0016935:49316-49335 Msa1360070:intron 40.0%
AGAGTAGATCAAATGGAGGA+TGG + tig0016935:49320-49339 Msa1360070:intron 40.0%
TGGTGCATGATAGACCATTA+TGG + tig0016935:49420-49439 Msa1360070:intron 40.0%
GGTGCATGATAGACCATTAT+GGG + tig0016935:49421-49440 Msa1360070:intron 40.0%
GACCATTATGGGAAAAGACT+TGG + tig0016935:49432-49451 Msa1360070:intron 40.0%
GACAATTCAGGATCTTCAAC+AGG - tig0016935:49526-49545 None:intergenic 40.0%
GTCCAGAGGAAGATAAATCT+AGG - tig0016935:49569-49588 None:intergenic 40.0%
! GGTTCAACCTTTGATTCGTT+TGG - tig0016935:49797-49816 None:intergenic 40.0%
!! GGCTTTGAAAACAGTTTCTG+TGG - tig0016935:49818-49837 None:intergenic 40.0%
! AACTGTTTTCAAAGCCAGTC+CGG + tig0016935:49822-49841 Msa1360070:CDS 40.0%
! GGGTGATTTGAAGAAGCATA+TGG + tig0016935:49874-49893 Msa1360070:CDS 40.0%
AGCATATGGTTTCCCTTAAC+TGG + tig0016935:49888-49907 Msa1360070:CDS 40.0%
ATCAGAGAGCAACCAGTTAA+GGG - tig0016935:49903-49922 None:intergenic 40.0%
TATCAGAGAGCAACCAGTTA+AGG - tig0016935:49904-49923 None:intergenic 40.0%
AGCTCAGTTTCCAAGTCTAA+GGG - tig0016935:49929-49948 None:intergenic 40.0%
TAGCTCAGTTTCCAAGTCTA+AGG - tig0016935:49930-49949 None:intergenic 40.0%
TTCCAATGCTAAATTGAGGC+TGG - tig0016935:50072-50091 None:intergenic 40.0%
TGTATTCATAGAGGCCTCAA+TGG - tig0016935:50188-50207 None:intergenic 40.0%
! TCTCTGAGAGAGAACAATAC+CGG + tig0016935:50217-50236 Msa1360070:CDS 40.0%
TAGCTGATCTTACAATGGAC+TGG - tig0016935:50273-50292 None:intergenic 40.0%
AGAGGTTTCTCATACTTCAG+TGG - tig0016935:50401-50420 None:intergenic 40.0%
! TTAGATTTCAGGTCTTGGAG+AGG - tig0016935:50419-50438 None:intergenic 40.0%
! CACACAAACACAGGTTTTCA+AGG - tig0016935:50550-50569 None:intergenic 40.0%
AACGGAGAAACAGATATTGC+AGG + tig0016935:50657-50676 Msa1360070:CDS 40.0%
! TTAAAGCTTCTGGTGGATCA+GGG - tig0016935:50762-50781 None:intergenic 40.0%
! TTTAAAGCTTCTGGTGGATC+AGG - tig0016935:50763-50782 None:intergenic 40.0%
GAAAGCAATGATAACCTCAG+TGG - tig0016935:50839-50858 None:intergenic 40.0%
AGGTTATCATTGCTTTCCCT+TGG + tig0016935:50842-50861 Msa1360070:intron 40.0%
GGTTATCATTGCTTTCCCTT+GGG + tig0016935:50843-50862 Msa1360070:intron 40.0%
AAGTAGTCGTGAATCTCTAC+AGG - tig0016935:50894-50913 None:intergenic 40.0%
! ATGTAGGTTGGGGATATCAA+CGG + tig0016935:50923-50942 Msa1360070:intron 40.0%
ACTCATGTCGAACACTATGT+CGG - tig0016935:50996-51015 None:intergenic 40.0%
! TTCCTTTGGTACCACTGTTT+TGG + tig0016935:51035-51054 Msa1360070:CDS 40.0%
TACCAAAACAGTGGTACCAA+AGG - tig0016935:51040-51059 None:intergenic 40.0%
GCATGTAATGTTAGGAACCA+TGG - tig0016935:51100-51119 None:intergenic 40.0%
CTCCTAGCCAAATTCTTTAC+TGG + tig0016935:51278-51297 Msa1360070:intron 40.0%
CTTCCAATATACACGTGATG+AGG - tig0016935:51389-51408 None:intergenic 40.0%
CGAACAATCATGTGACTACA+TGG - tig0016935:51615-51634 None:intergenic 40.0%
TGTAGTCACATGATTGTTCG+AGG + tig0016935:51615-51634 Msa1360070:CDS 40.0%
TGCTGAAGACCTTTATGACT+TGG + tig0016935:51656-51675 Msa1360070:CDS 40.0%
! CAAATTGTTTGAAACGCCGT+TGG - tig0016935:51833-51852 None:intergenic 40.0%
! TTTTGTTAGAACCGGCTAAG+AGG + tig0016935:51973-51992 Msa1360070:intron 40.0%
GATGCAAAACTTAATGCAGC+AGG + tig0016935:52027-52046 Msa1360070:CDS 40.0%
GTTCACAAAGTTGTGGTTTC+CGG + tig0016935:52339-52358 Msa1360070:intron 40.0%
TTCACAAAGTTGTGGTTTCC+GGG + tig0016935:52340-52359 Msa1360070:intron 40.0%
TGTGTGTGTGTATGCATGTA+TGG + tig0016935:52820-52839 Msa1360070:intron 40.0%
CTTATTTAGGCGATTGTGAC+TGG + tig0016935:52947-52966 Msa1360070:intron 40.0%
ACCAATTGGATTATGGCACA+TGG + tig0016935:53024-53043 Msa1360070:intron 40.0%
ATGTTGTCAATCCCAGATAG+CGG - tig0016935:53336-53355 None:intergenic 40.0%
ATTTATCAAGCACCCTTGCT+TGG - tig0016935:53645-53664 None:intergenic 40.0%
TGGGAAAAACCTTGCGAATA+CGG + tig0016935:53676-53695 Msa1360070:CDS 40.0%
CAAATTTGTCCGTATTCGCA+AGG - tig0016935:53688-53707 None:intergenic 40.0%
AGCTATTGTGATTCCTACTC+AGG + tig0016935:53793-53812 Msa1360070:CDS 40.0%
TTGTGATTCCTACTCAGGTA+AGG + tig0016935:53798-53817 Msa1360070:intron 40.0%
! ATGTAAAATGGCTTGGGATC+TGG + tig0016935:53980-53999 Msa1360070:intron 40.0%
! TGTAAAATGGCTTGGGATCT+GGG + tig0016935:53981-54000 Msa1360070:intron 40.0%
CTAAATTAGCCCACCCAAAT+TGG - tig0016935:54050-54069 None:intergenic 40.0%
!!! AGGTCTCCATGTTTTTTGTC+AGG + tig0016935:54206-54225 Msa1360070:intron 40.0%
!!! GGTCTCCATGTTTTTTGTCA+GGG + tig0016935:54207-54226 Msa1360070:intron 40.0%
GGGATCACGATAAGACAAAA+AGG - tig0016935:54623-54642 None:intergenic 40.0%
! CTTGAGGTATATGATGGAAC+TGG + tig0016935:54658-54677 Msa1360070:CDS 40.0%
! TTTGGCATCAGGAAGTTGAT+AGG - tig0016935:54761-54780 None:intergenic 40.0%
TATCAACTTCCTGATGCCAA+AGG + tig0016935:54760-54779 Msa1360070:CDS 40.0%
CTACTATAACCTTTGGCATC+AGG - tig0016935:54772-54791 None:intergenic 40.0%
CTGATGCCAAAGGTTATAGT+AGG + tig0016935:54770-54789 Msa1360070:CDS 40.0%
CAGTATGTTGCGGTATATAC+TGG + tig0016935:54943-54962 Msa1360070:intron 40.0%
GTATATACTGGGTATCACAG+AGG + tig0016935:54955-54974 Msa1360070:CDS 40.0%
GTGGAGAGATATTATCTACG+AGG + tig0016935:54996-55015 Msa1360070:CDS 40.0%
CACTACCATGCAATAAACAC+TGG - tig0016935:55116-55135 None:intergenic 40.0%
TGTCTAACACCATCACATTC+TGG - tig0016935:55257-55276 None:intergenic 40.0%
! TTTGAAGTCCTTCAAGCTGA+GGG - tig0016935:55428-55447 None:intergenic 40.0%
TGATGCAATGGAAGCAGTTA+AGG + tig0016935:55456-55475 Msa1360070:CDS 40.0%
GGAAGCAGTTAAGGATAAAG+GGG + tig0016935:55465-55484 Msa1360070:CDS 40.0%
AGTTAAGGATAAAGGGGTTG+TGG + tig0016935:55471-55490 Msa1360070:CDS 40.0%
ATCTCCAGATGATGTAGATG+CGG + tig0016935:55504-55523 Msa1360070:CDS 40.0%
TAGGGGAGATGTATACACGA+TGG + tig0016935:47134-47153 Msa1360070:exon 45.0%
TGGAGATAGGAGGAAGTTGT+AGG + tig0016935:47188-47207 Msa1360070:CDS 45.0%
AGAAGAAAGCAATCTTGCGG+TGG - tig0016935:47371-47390 None:intergenic 45.0%
CATACCTGGAGAAGAAACGA+GGG - tig0016935:47452-47471 None:intergenic 45.0%
ACATACCTGGAGAAGAAACG+AGG - tig0016935:47453-47472 None:intergenic 45.0%
ATGAAGTTGCGCGTGAACTA+GGG + tig0016935:47571-47590 Msa1360070:CDS 45.0%
ATACCAGTGGAATCATTGGG+AGG - tig0016935:47735-47754 None:intergenic 45.0%
ACAGGGTAACAAGTCCTATC+AGG - tig0016935:47873-47892 None:intergenic 45.0%
! AGACTTTTCAACAGGAGGGT+TGG + tig0016935:47979-47998 Msa1360070:CDS 45.0%
!! AACACATATGGCGTTGACAG+CGG + tig0016935:48303-48322 Msa1360070:CDS 45.0%
TGCTGGGATGGTAATACTTG+CGG - tig0016935:48663-48682 None:intergenic 45.0%
AAATCCGTGAATTGCTGGGA+TGG - tig0016935:48675-48694 None:intergenic 45.0%
ATCCCAGCAATTCACGGATT+TGG + tig0016935:48674-48693 Msa1360070:CDS 45.0%
GTCTGGGCTTAGATCTACAA+GGG - tig0016935:48815-48834 None:intergenic 45.0%
AGTCTGGGCTTAGATCTACA+AGG - tig0016935:48816-48835 None:intergenic 45.0%
! TGGGAAGTGCAACTAGAAGT+AGG - tig0016935:49060-49079 None:intergenic 45.0%
TGGTGGAAAACAGACTTAGG+TGG + tig0016935:49255-49274 Msa1360070:intron 45.0%
AGGAAGCTGTTGGACAATTC+AGG - tig0016935:49538-49557 None:intergenic 45.0%
GGAACATAAGAGGAAGCTGT+TGG - tig0016935:49548-49567 None:intergenic 45.0%
AGTTAGCGGTTAATTGCTGC+TGG - tig0016935:49719-49738 None:intergenic 45.0%
CTCATCCCCAAACGAATCAA+AGG + tig0016935:49787-49806 Msa1360070:CDS 45.0%
TAAGTCTCAACAATCCGGAC+TGG - tig0016935:49839-49858 None:intergenic 45.0%
CAGGGTAAGTCTCAACAATC+CGG - tig0016935:49844-49863 None:intergenic 45.0%
ATTGTTGAGACTTACCCTGC+AGG + tig0016935:49845-49864 Msa1360070:CDS 45.0%
TTGTTGAGACTTACCCTGCA+GGG + tig0016935:49846-49865 Msa1360070:CDS 45.0%
CTCTGATAAGCCCTTAGACT+TGG + tig0016935:49916-49935 Msa1360070:CDS 45.0%
! ATTTTTCTGAGTGGCGAAGC+AGG - tig0016935:49989-50008 None:intergenic 45.0%
TTCTAACCCACCACCAACAA+TGG - tig0016935:50038-50057 None:intergenic 45.0%
CTCCAGCCTCAATTTAGCAT+TGG + tig0016935:50067-50086 Msa1360070:CDS 45.0%
! CTCTGAGAGAGAACAATACC+GGG + tig0016935:50218-50237 Msa1360070:CDS 45.0%
!! TACAATGGACTGGAGCATGA+GGG - tig0016935:50263-50282 None:intergenic 45.0%
!! TTACAATGGACTGGAGCATG+AGG - tig0016935:50264-50283 None:intergenic 45.0%
TCATACTTCAGTGGCTCAAG+GGG - tig0016935:50392-50411 None:intergenic 45.0%
CTCATACTTCAGTGGCTCAA+GGG - tig0016935:50393-50412 None:intergenic 45.0%
TCTCATACTTCAGTGGCTCA+AGG - tig0016935:50394-50413 None:intergenic 45.0%
ATGGCTTCTCACACAAACAC+AGG - tig0016935:50559-50578 None:intergenic 45.0%
TCAAGAGCTTAGGCTTAAGC+AGG + tig0016935:50732-50751 Msa1360070:CDS 45.0%
! TAAAGCTTCTGGTGGATCAG+GGG - tig0016935:50761-50780 None:intergenic 45.0%
ACCTATTCATGTTCCCACTG+AGG + tig0016935:50822-50841 Msa1360070:CDS 45.0%
ACCTCAGTGGGAACATGAAT+AGG - tig0016935:50826-50845 None:intergenic 45.0%
AACACACAACTCTCACCCAA+GGG - tig0016935:50861-50880 None:intergenic 45.0%
AAACACACAACTCTCACCCA+AGG - tig0016935:50862-50881 None:intergenic 45.0%
GTGAATCTCTACAGGCTACT+AGG - tig0016935:50886-50905 None:intergenic 45.0%
GTCGGTGTAAAGGACATCAT+TGG - tig0016935:50978-50997 None:intergenic 45.0%
CGAACACTATGTCGGTGTAA+AGG - tig0016935:50988-51007 None:intergenic 45.0%
GAAGCAAGAGCTTCTTCCTT+TGG + tig0016935:51021-51040 Msa1360070:CDS 45.0%
TAGCCAATCATTGCTGGAGA+TGG + tig0016935:51485-51504 Msa1360070:intron 45.0%
AGCCAATCATTGCTGGAGAT+GGG + tig0016935:51486-51505 Msa1360070:intron 45.0%
TCCATTCACATCATCAGTGC+AGG + tig0016935:51578-51597 Msa1360070:CDS 45.0%
CCATTCACATCATCAGTGCA+GGG + tig0016935:51579-51598 Msa1360070:CDS 45.0%
TTCCCAGAGTAGAGCAAGAA+TGG + tig0016935:51854-51873 Msa1360070:CDS 45.0%
CTCCATTCTTGCTCTACTCT+GGG - tig0016935:51859-51878 None:intergenic 45.0%
CAAAACTTAATGCAGCAGGC+TGG + tig0016935:52031-52050 Msa1360070:CDS 45.0%
AGGCTGGATGTCAGAAAAGA+TGG + tig0016935:52047-52066 Msa1360070:CDS 45.0%
GGCTGGATGTCAGAAAAGAT+GGG + tig0016935:52048-52067 Msa1360070:CDS 45.0%
TGGATGTCAGAAAAGATGGG+TGG + tig0016935:52051-52070 Msa1360070:CDS 45.0%
TCATCATCCCTCAACAGTGT+TGG + tig0016935:52199-52218 Msa1360070:intron 45.0%
! ATCCCTCAACAGTGTTGGAT+CGG + tig0016935:52204-52223 Msa1360070:intron 45.0%
GGTGTGAAGATCGCTGTATA+CGG + tig0016935:52225-52244 Msa1360070:intron 45.0%
GTGTCGTAAACGTTCATCAC+CGG - tig0016935:52302-52321 None:intergenic 45.0%
GCCATGTGCCATAATCCAAT+TGG - tig0016935:53028-53047 None:intergenic 45.0%
GATTATGGCACATGGCCAAT+TGG + tig0016935:53032-53051 Msa1360070:intron 45.0%
CACATGGCCAATTGGAGTAT+TGG + tig0016935:53040-53059 Msa1360070:intron 45.0%
TGTTGTCAATCCCAGATAGC+GGG - tig0016935:53335-53354 None:intergenic 45.0%
GCACAGATAATGTCATGCCT+AGG - tig0016935:53413-53432 None:intergenic 45.0%
GGCATGACATTATCTGTGCA+AGG + tig0016935:53414-53433 Msa1360070:intron 45.0%
TAGCAATGGGTGAGCTAGTA+GGG - tig0016935:53733-53752 None:intergenic 45.0%
GAATTGAACCTGAGACCTTG+AGG - tig0016935:54018-54037 None:intergenic 45.0%
AATTCTCCCCAGTGCCAATT+TGG + tig0016935:54033-54052 Msa1360070:intron 45.0%
ATTCTCCCCAGTGCCAATTT+GGG + tig0016935:54034-54053 Msa1360070:intron 45.0%
GCAACCAACGTTTATGATGC+TGG + tig0016935:54392-54411 Msa1360070:CDS 45.0%
AAAGCCATAATCGGGACCAT+TGG + tig0016935:54724-54743 Msa1360070:CDS 45.0%
AAGCCATAATCGGGACCATT+GGG + tig0016935:54725-54744 Msa1360070:CDS 45.0%
ATAGGAGTCTACATCCCCAA+TGG - tig0016935:54743-54762 None:intergenic 45.0%
TGGGTATCACAGAGGAAGAA+AGG + tig0016935:54963-54982 Msa1360070:CDS 45.0%
GAAGAAAGGCAAAAGAGACG+TGG + tig0016935:54977-54996 Msa1360070:CDS 45.0%
CGATGCCAGTGTTTATTGCA+TGG + tig0016935:55108-55127 Msa1360070:intron 45.0%
! GTTTGAAGTCCTTCAAGCTG+AGG - tig0016935:55429-55448 None:intergenic 45.0%
TTTGCCGCATCTACATCATC+TGG - tig0016935:55511-55530 None:intergenic 45.0%
TGATGTAGATGCGGCAAACA+AGG + tig0016935:55513-55532 Msa1360070:CDS 45.0%
!! CATTATTATTATTATTATTA+TGG - tig0016935:47511-47530 None:intergenic 5.0%
!!! GATTTTTTTTAATTTTTTAA+AGG + tig0016935:55683-55702 Msa1360070:three_prime_UTR 5.0%
GGGAGATGTATACACGATGG+AGG + tig0016935:47137-47156 Msa1360070:exon 50.0%
GGTGCGAGAGAAATATCTGG+TGG - tig0016935:47263-47282 None:intergenic 50.0%
TGAATGGGGATAGAACGGAG+GGG - tig0016935:47285-47304 None:intergenic 50.0%
GTGAATGGGGATAGAACGGA+GGG - tig0016935:47286-47305 None:intergenic 50.0%
AGTGAATGGGGATAGAACGG+AGG - tig0016935:47287-47306 None:intergenic 50.0%
GGGAGTGAATGGGGATAGAA+CGG - tig0016935:47290-47309 None:intergenic 50.0%
ATCTTGCGGTGGAAGTTGAG+AGG - tig0016935:47360-47379 None:intergenic 50.0%
CTCTGGTGGAGAAATGGTTG+CGG - tig0016935:47426-47445 None:intergenic 50.0%
AGAAGAAACGAGGGAAGCTC+TGG - tig0016935:47443-47462 None:intergenic 50.0%
GATGAAGTTGCGCGTGAACT+AGG + tig0016935:47570-47589 Msa1360070:CDS 50.0%
TGGAATCATTGGGAGGAGTC+CGG - tig0016935:47728-47747 None:intergenic 50.0%
ACTCCTCCCAATGATTCCAC+TGG + tig0016935:47729-47748 Msa1360070:CDS 50.0%
ACTTGGACGAGCTTCTCAAC+AGG + tig0016935:48172-48191 Msa1360070:CDS 50.0%
TATTACCACTCAGGATGCGG+AGG - tig0016935:48729-48748 None:intergenic 50.0%
!! AATGGGTTGCACAGCAAGTC+AGG - tig0016935:48870-48889 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + tig0016935:49164-49183 Msa1360070:intron 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + tig0016935:49165-49184 Msa1360070:intron 50.0%
GAGAGAGAGAGAGAGAGAGA+TGG + tig0016935:49165-49184 Msa1360070:intron 50.0%
AGAGAGAGAGAGAGAGATGG+TGG + tig0016935:49238-49257 Msa1360070:intron 50.0%
GAGGATGGTCAGATCACAAG+AGG + tig0016935:49335-49354 Msa1360070:intron 50.0%
TGTTGAGACTTACCCTGCAG+GGG + tig0016935:49847-49866 Msa1360070:CDS 50.0%
AGACTGGGTGATGCCATTGT+TGG + tig0016935:50022-50041 Msa1360070:CDS 50.0%
!! GTGATGCCATTGTTGGTGGT+GGG + tig0016935:50029-50048 Msa1360070:CDS 50.0%
AATACCGGGTCATTTCCTCG+TGG + tig0016935:50232-50251 Msa1360070:CDS 50.0%
! TTTTCATTGTCAGCCGGACC+CGG + tig0016935:50612-50631 Msa1360070:intron 50.0%
TCTTCACGAGCAGCTTTCTC+CGG - tig0016935:50634-50653 None:intergenic 50.0%
AGCTGCTCGTGAAGAAGCAA+CGG + tig0016935:50639-50658 Msa1360070:CDS 50.0%
! CTCGTGCTACTCAAGAGCTT+AGG + tig0016935:50722-50741 Msa1360070:CDS 50.0%
TGCCCATCTCCAGCAATGAT+TGG - tig0016935:51491-51510 None:intergenic 50.0%
ATTGCTGGAGATGGGCACAA+AGG + tig0016935:51494-51513 Msa1360070:CDS 50.0%
! CCCTGCACTGATGATGTGAA+TGG - tig0016935:51582-51601 None:intergenic 50.0%
GATTGTTCGAGGCAAAGCCA+TGG + tig0016935:51626-51645 Msa1360070:CDS 50.0%
TCACACTGCTACTGAACTCC+AGG + tig0016935:51773-51792 Msa1360070:intron 50.0%
CCTCCATTCTTGCTCTACTC+TGG - tig0016935:51860-51879 None:intergenic 50.0%
CCAGAGTAGAGCAAGAATGG+AGG + tig0016935:51857-51876 Msa1360070:CDS 50.0%
GTCATGGAATTGCAGCTGCA+AGG + tig0016935:52001-52020 Msa1360070:CDS 50.0%
TGGAATTGCAGCTGCAAGGA+TGG + tig0016935:52005-52024 Msa1360070:CDS 50.0%
CAGAAAAGATGGGTGGTCTC+AGG + tig0016935:52058-52077 Msa1360070:CDS 50.0%
AAAGATGGGTGGTCTCAGGT+TGG + tig0016935:52062-52081 Msa1360070:intron 50.0%
GCGCGCCTAACAACTATGAA+TGG - tig0016935:52146-52165 None:intergenic 50.0%
CACCGATCCAACACTGTTGA+GGG - tig0016935:52209-52228 None:intergenic 50.0%
ACACCGATCCAACACTGTTG+AGG - tig0016935:52210-52229 None:intergenic 50.0%
GTGAAGATCGCTGTATACGG+CGG + tig0016935:52228-52247 Msa1360070:intron 50.0%
GTTGTCGTCTTCAACGAACC+AGG - tig0016935:52378-52397 None:intergenic 50.0%
TGAGGACAAGCCCAGAAGAA+GGG - tig0016935:52985-53004 None:intergenic 50.0%
TTGAGGACAAGCCCAGAAGA+AGG - tig0016935:52986-53005 None:intergenic 50.0%
! ATAGCGGGATAGCATGGTGA+GGG - tig0016935:53320-53339 None:intergenic 50.0%
ACCATGCTATCCCGCTATCT+GGG + tig0016935:53322-53341 Msa1360070:intron 50.0%
! CGCAAGGTTTTTCCCATCAG+CGG - tig0016935:53672-53691 None:intergenic 50.0%
GTAGCAATGGGTGAGCTAGT+AGG - tig0016935:53734-53753 None:intergenic 50.0%
TGGGATCGTGTACGTGTTAG+TGG + tig0016935:54473-54492 Msa1360070:CDS 50.0%
GATCGTGTACGTGTTAGTGG+TGG + tig0016935:54476-54495 Msa1360070:CDS 50.0%
! CGTGTTAGTGGTGGAGCTTA+TGG + tig0016935:54485-54504 Msa1360070:CDS 50.0%
! GTTAGTGGTGGAGCTTATGG+AGG + tig0016935:54488-54507 Msa1360070:CDS 50.0%
AGCCATAATCGGGACCATTG+GGG + tig0016935:54726-54745 Msa1360070:CDS 50.0%
ATCCCCAATGGTCCCGATTA+TGG - tig0016935:54731-54750 None:intergenic 50.0%
TAAAGGGGTTGTGGTTGCAG+TGG + tig0016935:55480-55499 Msa1360070:CDS 50.0%
! GGGGGTGCGAGAGAAATATC+TGG - tig0016935:47266-47285 None:intergenic 55.0%
GAATGGGGATAGAACGGAGG+GGG - tig0016935:47284-47303 None:intergenic 55.0%
AGTCGGAGGAGAGAACCTTG+CGG - tig0016935:47317-47336 None:intergenic 55.0%
! GGGAAGCTCTGGTGGAGAAA+TGG - tig0016935:47432-47451 None:intergenic 55.0%
! AGAAACGAGGGAAGCTCTGG+TGG - tig0016935:47440-47459 None:intergenic 55.0%
GCTTCCCTCGTTTCTTCTCC+AGG + tig0016935:47445-47464 Msa1360070:CDS 55.0%
!! TGGTGGTGGCGAAGTAGTGA+AGG + tig0016935:47548-47567 Msa1360070:CDS 55.0%
!! TGGTATTGGTGGAGGCGACA+GGG - tig0016935:47890-47909 None:intergenic 55.0%
!! TTGGTATTGGTGGAGGCGAC+AGG - tig0016935:47891-47910 None:intergenic 55.0%
TGTCGCCTCCACCAATACCA+AGG + tig0016935:47890-47909 Msa1360070:CDS 55.0%
GACGAGCTTCTCAACAGGTG+AGG + tig0016935:48177-48196 Msa1360070:intron 55.0%
!! ACATATGGCGTTGACAGCGG+AGG + tig0016935:48306-48325 Msa1360070:CDS 55.0%
AGAGAGAGAGAGAGAGAGGG+AGG + tig0016935:49176-49195 Msa1360070:intron 55.0%
GAGAGAGAGAGAGAGAGGGA+GGG + tig0016935:49177-49196 Msa1360070:intron 55.0%
GGTCAGATCACAAGAGGCAG+AGG + tig0016935:49341-49360 Msa1360070:intron 55.0%
AGACTTACCCTGCAGGGGAA+GGG + tig0016935:49852-49871 Msa1360070:CDS 55.0%
CTGGGTGATGCCATTGTTGG+TGG + tig0016935:50025-50044 Msa1360070:CDS 55.0%
! GGTGATGCCATTGTTGGTGG+TGG + tig0016935:50028-50047 Msa1360070:CDS 55.0%
CAAGCCACGAGGAAATGACC+CGG - tig0016935:50239-50258 None:intergenic 55.0%
CTTCACGAGCAGCTTTCTCC+GGG - tig0016935:50633-50652 None:intergenic 55.0%
CACATCATCAGTGCAGGGCA+AGG + tig0016935:51584-51603 Msa1360070:CDS 55.0%
TAGAACCGGCTAAGAGGCAG+TGG + tig0016935:51979-51998 Msa1360070:intron 55.0%
CATGACCACTGCCTCTTAGC+CGG - tig0016935:51987-52006 None:intergenic 55.0%
! GATGAGCTTTTCTCCTGCGC+CGG + tig0016935:52280-52299 Msa1360070:intron 55.0%
TAAACGTTCATCACCGGCGC+AGG - tig0016935:52296-52315 None:intergenic 55.0%
ACCAGGTCGCAAACTTGACC+CGG - tig0016935:52361-52380 None:intergenic 55.0%
CACACACACACACAGAGAGC+TGG - tig0016935:52786-52805 None:intergenic 55.0%
GAGGACAAGCCCAGAAGAAG+GGG - tig0016935:52984-53003 None:intergenic 55.0%
TTCTGGGCTTGTCCTCAACG+AGG + tig0016935:52988-53007 Msa1360070:intron 55.0%
GTCGGGCCTCTGATACCAAT+TGG + tig0016935:53010-53029 Msa1360070:intron 55.0%
!! GATAGCGGGATAGCATGGTG+AGG - tig0016935:53321-53340 None:intergenic 55.0%
CACCATGCTATCCCGCTATC+TGG + tig0016935:53321-53340 Msa1360070:intron 55.0%
!! TCCCAGATAGCGGGATAGCA+TGG - tig0016935:53326-53345 None:intergenic 55.0%
! TGGGAGTGTGCTCTTCCTCA+AGG + tig0016935:54000-54019 Msa1360070:intron 55.0%
GTGCTCTTCCTCAAGGTCTC+AGG + tig0016935:54007-54026 Msa1360070:intron 55.0%
TCCCCAGTGCCAATTTGGGT+GGG + tig0016935:54038-54057 Msa1360070:intron 55.0%
AGCCCACCCAAATTGGCACT+GGG - tig0016935:54043-54062 None:intergenic 55.0%
TAGCCCACCCAAATTGGCAC+TGG - tig0016935:54044-54063 None:intergenic 55.0%
TTGCGGCGGTGGGAGTGAAT+GGG - tig0016935:47300-47319 None:intergenic 60.0%
TGGAAGTTGAGAGGCTGCGG+CGG - tig0016935:47351-47370 None:intergenic 60.0%
CGGTGGAAGTTGAGAGGCTG+CGG - tig0016935:47354-47373 None:intergenic 60.0%
GAATGCGGGAGGGAGCTACT+AGG - tig0016935:48954-48973 None:intergenic 60.0%
AGAGAGAGAGAGAGGGAGGG+AGG + tig0016935:49180-49199 Msa1360070:intron 60.0%
GAGAGAGAGAGAGGGAGGGA+GGG + tig0016935:49181-49200 Msa1360070:intron 60.0%
GAGACTTACCCTGCAGGGGA+AGG + tig0016935:49851-49870 Msa1360070:CDS 60.0%
GACTTACCCTGCAGGGGAAG+GGG + tig0016935:49853-49872 Msa1360070:CDS 60.0%
ACTTACCCTGCAGGGGAAGG+GGG + tig0016935:49854-49873 Msa1360070:CDS 60.0%
AATCACCCCCTTCCCCTGCA+GGG - tig0016935:49862-49881 None:intergenic 60.0%
AAATCACCCCCTTCCCCTGC+AGG - tig0016935:49863-49882 None:intergenic 60.0%
AGCATGAGGGACAAGCCACG+AGG - tig0016935:50250-50269 None:intergenic 60.0%
GTTCGAGGCAAAGCCATGGC+TGG + tig0016935:51630-51649 Msa1360070:CDS 60.0%
GTCTTCAGCACGTCCAGCCA+TGG - tig0016935:51646-51665 None:intergenic 60.0%
CGGCTAAGAGGCAGTGGTCA+TGG + tig0016935:51985-52004 Msa1360070:CDS 60.0%
TCCGGGTCAAGTTTGCGACC+TGG + tig0016935:52357-52376 Msa1360070:intron 60.0%
GGGCTTGTCCTCAACGAGGT+CGG + tig0016935:52992-53011 Msa1360070:intron 60.0%
GGCTTGTCCTCAACGAGGTC+GGG + tig0016935:52993-53012 Msa1360070:intron 60.0%
CTCCCCAGTGCCAATTTGGG+TGG + tig0016935:54037-54056 Msa1360070:intron 60.0%
GCCCACCCAAATTGGCACTG+GGG - tig0016935:54042-54061 None:intergenic 60.0%
TGCGGCGGTGGGAGTGAATG+GGG - tig0016935:47299-47318 None:intergenic 65.0%
CTTGCGGCGGTGGGAGTGAA+TGG - tig0016935:47301-47320 None:intergenic 65.0%
CATTCACTCCCACCGCCGCA+AGG + tig0016935:47299-47318 Msa1360070:CDS 65.0%
GGAGAGAACCTTGCGGCGGT+GGG - tig0016935:47310-47329 None:intergenic 65.0%
AGGAGAGAACCTTGCGGCGG+TGG - tig0016935:47311-47330 None:intergenic 65.0%
CGGAGGAGAGAACCTTGCGG+CGG - tig0016935:47314-47333 None:intergenic 65.0%
AAGTTGAGAGGCTGCGGCGG+CGG - tig0016935:47348-47367 None:intergenic 65.0%
!! AGGATGCGGAGGCGCTCAGT+TGG - tig0016935:48718-48737 None:intergenic 65.0%
CGGGAGGGAGCTACTAGGCT+TGG - tig0016935:48949-48968 None:intergenic 65.0%
AGAGAGAGAGGGAGGGAGGG+AGG + tig0016935:49184-49203 Msa1360070:intron 65.0%
GAGAGAGAGGGAGGGAGGGA+GGG + tig0016935:49185-49204 Msa1360070:intron 65.0%
CGAGCAGCTTTCTCCGGGTC+CGG - tig0016935:50628-50647 None:intergenic 65.0%
GATCGCTGTATACGGCGGCG+CGG + tig0016935:52233-52252 Msa1360070:intron 65.0%
TCAGAGGCCCGACCTCGTTG+AGG - tig0016935:53003-53022 None:intergenic 65.0%
GAGCGCCTCCGCATCCTGAG+TGG + tig0016935:48721-48740 Msa1360070:CDS 70.0%
AGAGAGGGAGGGAGGGAGGG+AGG + tig0016935:49188-49207 Msa1360070:intron 70.0%
GAGAGGGAGGGAGGGAGGGA+GGG + tig0016935:49189-49208 Msa1360070:intron 70.0%
AGGGAGGGAGGGAGGGAGAG+AGG + tig0016935:49212-49231 Msa1360070:intron 70.0%
GGGAGGGAGGGAGGGAGAGA+GGG + tig0016935:49213-49232 Msa1360070:intron 70.0%
TTGAGAGGCTGCGGCGGCGG+CGG - tig0016935:47345-47364 None:intergenic 75.0%
AGGGAGGGAGGGAGGGAGGG+AGG + tig0016935:49192-49211 Msa1360070:intron 75.0%
GGGAGGGAGGGAGGGAGGGA+GGG + tig0016935:49193-49212 Msa1360070:intron 75.0%
AGGGAGGGAGGGAGGGAGGG+AGG + tig0016935:49192-49211 Msa1360070:intron 75.0%
GGGAGGGAGGGAGGGAGGGA+GGG + tig0016935:49193-49212 Msa1360070:intron 75.0%
AGGGAGGGAGGGAGGGAGGG+AGG + tig0016935:49192-49211 Msa1360070:intron 75.0%
GGGAGGGAGGGAGGGAGGGA+GGG + tig0016935:49193-49212 Msa1360070:intron 75.0%
AGGGAGGGAGGGAGGGAGGG+AGG + tig0016935:49192-49211 Msa1360070:intron 75.0%
GGGAGGGAGGGAGGGAGGGA+GGG + tig0016935:49193-49212 Msa1360070:intron 75.0%
GCTGTATACGGCGGCGCGGC+TGG + tig0016935:52237-52256 Msa1360070:intron 75.0%
! CGGCGGCGGAGGAGAGTCGG+AGG - tig0016935:47331-47350 None:intergenic 80.0%
! CGGCGGCGGCGGAGGAGAGT+CGG - tig0016935:47334-47353 None:intergenic 80.0%
! ACGGCGGCGCGGCTGGCATG+CGG + tig0016935:52244-52263 Msa1360070:intron 80.0%
! AGAGGCTGCGGCGGCGGCGG+AGG - tig0016935:47342-47361 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
tig0016935 gene 47107 55842 47107 ID=Msa1360070;Name=Msa1360070
tig0016935 mRNA 47107 55842 47107 ID=Msa1360070-mRNA-1;Parent=Msa1360070;Name=Msa1360070-mRNA-1;_AED=0.05;_eAED=0.05;_QI=35|1|1|1|1|1|17|269|1099
tig0016935 exon 47107 47466 47107 ID=Msa1360070-mRNA-1:exon:11695;Parent=Msa1360070-mRNA-1
tig0016935 exon 47544 48044 47544 ID=Msa1360070-mRNA-1:exon:11696;Parent=Msa1360070-mRNA-1
tig0016935 exon 48123 48193 48123 ID=Msa1360070-mRNA-1:exon:11697;Parent=Msa1360070-mRNA-1
tig0016935 exon 48288 48371 48288 ID=Msa1360070-mRNA-1:exon:11698;Parent=Msa1360070-mRNA-1
tig0016935 exon 48652 48742 48652 ID=Msa1360070-mRNA-1:exon:11699;Parent=Msa1360070-mRNA-1
tig0016935 exon 49762 50279 49762 ID=Msa1360070-mRNA-1:exon:11700;Parent=Msa1360070-mRNA-1
tig0016935 exon 50365 50529 50365 ID=Msa1360070-mRNA-1:exon:11701;Parent=Msa1360070-mRNA-1
tig0016935 exon 50625 50843 50625 ID=Msa1360070-mRNA-1:exon:11702;Parent=Msa1360070-mRNA-1
tig0016935 exon 50929 51056 50929 ID=Msa1360070-mRNA-1:exon:11703;Parent=Msa1360070-mRNA-1
tig0016935 exon 51488 51677 51488 ID=Msa1360070-mRNA-1:exon:11704;Parent=Msa1360070-mRNA-1
tig0016935 exon 51795 51878 51795 ID=Msa1360070-mRNA-1:exon:11705;Parent=Msa1360070-mRNA-1
tig0016935 exon 51982 52079 51982 ID=Msa1360070-mRNA-1:exon:11706;Parent=Msa1360070-mRNA-1
tig0016935 exon 53547 53814 53547 ID=Msa1360070-mRNA-1:exon:11707;Parent=Msa1360070-mRNA-1
tig0016935 exon 54374 54536 54374 ID=Msa1360070-mRNA-1:exon:11708;Parent=Msa1360070-mRNA-1
tig0016935 exon 54611 54791 54611 ID=Msa1360070-mRNA-1:exon:11709;Parent=Msa1360070-mRNA-1
tig0016935 exon 54946 55017 54946 ID=Msa1360070-mRNA-1:exon:11710;Parent=Msa1360070-mRNA-1
tig0016935 exon 55432 55842 55432 ID=Msa1360070-mRNA-1:exon:11711;Parent=Msa1360070-mRNA-1
tig0016935 five_prime_UTR 47107 47141 47107 ID=Msa1360070-mRNA-1:five_prime_utr;Parent=Msa1360070-mRNA-1
tig0016935 CDS 47142 47466 47142 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 47544 48044 47544 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 48123 48193 48123 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 48288 48371 48288 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 48652 48742 48652 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 49762 50279 49762 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 50365 50529 50365 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 50625 50843 50625 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 50929 51056 50929 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 51488 51677 51488 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 51795 51878 51795 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 51982 52079 51982 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 53547 53814 53547 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 54374 54536 54374 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 54611 54791 54611 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 54946 55017 54946 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 CDS 55432 55573 55432 ID=Msa1360070-mRNA-1:cds;Parent=Msa1360070-mRNA-1
tig0016935 three_prime_UTR 55574 55842 55574 ID=Msa1360070-mRNA-1:three_prime_utr;Parent=Msa1360070-mRNA-1
Gene Sequence

>Msa1360070

ATGTATACACGATGGAGGCAGTATAAACGAGTTATCGGAAATATAATGGAGATAGGAGGAAGTTGTAGGATTAATTCAACTTCAATGGAAAGAGCGGCACTCGTTCGTTCTCTATCTACCACCAGATATTTCTCTCGCACCCCCTCCGTTCTATCCCCATTCACTCCCACCGCCGCAAGGTTCTCTCCTCCGACTCTCCTCCGCCGCCGCCGCAGCCTCTCAACTTCCACCGCAAGATTGCTTTCTTCTTCTACTTCTCGTCCGCTCTTTTACTTTCGTAACCGCAACCATTTCTCCACCAGAGCTTCCCTCGTTTCTTCTCCAGATATTGGTGGTGGCGAAGTAGTGAAGGATGAAGTTGCGCGTGAACTAGGGTTTGAGAAAGTTTCAGAAGAATTCATTCCAGAATGCAAATCAAAAGCAGTACTTTTCAAACACGTCAAGACAGGTGCACAAGTCATGTCTGTTTCAAACAACGATGAGAACAAAGTCTTTGGCATTGTTTTCCGGACTCCTCCCAATGATTCCACTGGTATTCCTCACATTTTAGAGCACAGTGTTTTGTGTGGTTCAAGAAAATATCCTCTCAAAGAACCATTTGTTGAGTTACTCAAAGGAAGCTTGCACACTTTCCTCAATGCATTCACTTATCCTGATAGGACTTGTTACCCTGTCGCCTCCACCAATACCAAGGATTTTTATAATTTGGTTGATGTCTATCTCGATGCCGTTTTCTTTCCTAAATGTGTCGAGGATGTTCAGACTTTTCAACAGGAGGGTTGGCATTATGAGCTCAATCATCCTTCTGAAGATATCACTTATAAAGGTGTTGTGTTTAATGAGATGAAGGGTGTCTACTCTCAACCAGATAATATACTTGGACGAGCTTCTCAACAGGCTCTTTTCCCAGATAACACATATGGCGTTGACAGCGGAGGTGATCCTCAAGTTATTCCTAAGTTGACTTTTGAGGAATTTAAGGAATTTCACCGCAAGTATTACCATCCCAGCAATTCACGGATTTGGTTTTATGGAGACGATGATCCAACTGAGCGCCTCCGCATCCTGAGTGAGTATTTAGACATGTTTGATGCAAGCTCATCCCCAAACGAATCAAAGGTTGAACCACAGAAACTGTTTTCAAAGCCAGTCCGGATTGTTGAGACTTACCCTGCAGGGGAAGGGGGTGATTTGAAGAAGCATATGGTTTCCCTTAACTGGTTGCTCTCTGATAAGCCCTTAGACTTGGAAACTGAGCTAGCACTTAGTTTTCTGAATCATCTTCTACTGGGCACTCCTGCTTCGCCACTCAGAAAAATTTTGCTAGAAAGCAGACTGGGTGATGCCATTGTTGGTGGTGGGTTAGAAGATGAACTACTCCAGCCTCAATTTAGCATTGGAATGAAGGGTGTTTCTGAAGATGATATTCCTAAGGTAGAAGAACTGATTGTGAATACACTTAAAAAGTTGGTTGAAGAAGGTTTTGATACAGATGCCATTGAGGCCTCTATGAATACAATTGAATTTTCTCTGAGAGAGAACAATACCGGGTCATTTCCTCGTGGCTTGTCCCTCATGCTCCAGTCCATTGGTAAATGGATTTATGATATGAATCCCCTTGAGCCACTGAAGTATGAGAAACCTCTCCAAGACCTGAAATCTAAAATAGCAAAGGAAGGCTCTAAATCTGTTTTTTCTCCATTAATAGAGAAATTCATCTTGAACAACCTTCATAAAGTAACTGTGCAAATGCAGCCGGACCCGGAGAAAGCTGCTCGTGAAGAAGCAACGGAGAAACAGATATTGCAGGAAGTTAAAGCAAGTATGACAACAGAAGATCTGGCAGAATTGACTCGTGCTACTCAAGAGCTTAGGCTTAAGCAGGAGACCCCTGATCCACCAGAAGCTTTAAAAACTGTTCCTAGTCTTTCTCTTCAAGATATCCCTAAAGAACCTATTCATGTTCCCACTGAGGTTGGGGATATCAACGGAGTAAAAGTTTTGCAGCATGATCTCTTCACCAATGATGTCCTTTACACCGACATAGTGTTCGACATGAGTTCATTGAAGCAAGAGCTTCTTCCTTTGGTACCACTGTTTTGCCAATCATTGCTGGAGATGGGCACAAAGGACTTGACTTTTGTCCAACTAAACCAATTAATTGGGAGAAAAACTGGAGGAATTTCAGTTTATCCATTCACATCATCAGTGCAGGGCAAGGAAGATCCATGTAGTCACATGATTGTTCGAGGCAAAGCCATGGCTGGACGTGCTGAAGACCTTTATGACTTGGTTAATTCTGTTCTTCAAGACGTTCAATTTACAGACCAACGGCGTTTCAAACAATTTGTTTCCCAGAGTAGAGCAAGAATGGAGAACCGGCTAAGAGGCAGTGGTCATGGAATTGCAGCTGCAAGGATGGATGCAAAACTTAATGCAGCAGGCTGGATGTCAGAAAAGATGGGTGGTCTCAGCTACCTTGAATTCCTTCAAACTCTTGAAAAGAGAATTGATCAAGATTGGGCTGATATCTCATCATCTCTTGAGGAAATTCGCAAAACTGTATTTTCCAAGCAAGGGTGCTTGATAAATATCACCGCTGATGGGAAAAACCTTGCGAATACGGACAAATTTGTGAGCAAATTTGTTGATATGCTCCCTACTAGCTCACCCATTGCTACACCAAATATTTGGAACGTTAGACTTCCGTTGACAAATGAAGCTATTGTGATTCCTACTCAGGTTAATTATGTTGGGAAAGCAACCAACGTTTATGATGCTGGTTATAAGCTTAATGGTAGTGCATATGTTATTTCCAAATACATTAGCAATACATGGTTGTGGGATCGTGTACGTGTTAGTGGTGGAGCTTATGGAGGTTTCTGTGATTTTGATACACATTCAGGAGTGTTCTCCTTTTTGTCTTATCGTGATCCCAACTTGCTAAAAACACTTGAGGTATATGATGGAACTGGTGACTTCTTAAGAGAATTGGAAATAGATGATGATACTCTTACAAAAGCCATAATCGGGACCATTGGGGATGTAGACTCCTATCAACTTCCTGATGCCAAAGGTTATAGTAGTATGTTGCGGTATATACTGGGTATCACAGAGGAAGAAAGGCAAAAGAGACGTGGAGAGATATTATCTACGAGCTTGAAGGACTTCAAACAATTCATTGATGCAATGGAAGCAGTTAAGGATAAAGGGGTTGTGGTTGCAGTGGCATCTCCAGATGATGTAGATGCGGCAAACAAGGAGATTTCCAACTTCTTTCAAATAAAGAAAGCCCTTTAA
Protein sequence

>Msa1360070

MYTRWRQYKRVIGNIMEIGGSCRINSTSMERAALVRSLSTTRYFSRTPSVLSPFTPTAARFSPPTLLRRRRSLSTSTARLLSSSTSRPLFYFRNRNHFSTRASLVSSPDIGGGEVVKDEVARELGFEKVSEEFIPECKSKAVLFKHVKTGAQVMSVSNNDENKVFGIVFRTPPNDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYLDAVFFPKCVEDVQTFQQEGWHYELNHPSEDITYKGVVFNEMKGVYSQPDNILGRASQQALFPDNTYGVDSGGDPQVIPKLTFEEFKEFHRKYYHPSNSRIWFYGDDDPTERLRILSEYLDMFDASSSPNESKVEPQKLFSKPVRIVETYPAGEGGDLKKHMVSLNWLLSDKPLDLETELALSFLNHLLLGTPASPLRKILLESRLGDAIVGGGLEDELLQPQFSIGMKGVSEDDIPKVEELIVNTLKKLVEEGFDTDAIEASMNTIEFSLRENNTGSFPRGLSLMLQSIGKWIYDMNPLEPLKYEKPLQDLKSKIAKEGSKSVFSPLIEKFILNNLHKVTVQMQPDPEKAAREEATEKQILQEVKASMTTEDLAELTRATQELRLKQETPDPPEALKTVPSLSLQDIPKEPIHVPTEVGDINGVKVLQHDLFTNDVLYTDIVFDMSSLKQELLPLVPLFCQSLLEMGTKDLTFVQLNQLIGRKTGGISVYPFTSSVQGKEDPCSHMIVRGKAMAGRAEDLYDLVNSVLQDVQFTDQRRFKQFVSQSRARMENRLRGSGHGIAAARMDAKLNAAGWMSEKMGGLSYLEFLQTLEKRIDQDWADISSSLEEIRKTVFSKQGCLINITADGKNLANTDKFVSKFVDMLPTSSPIATPNIWNVRLPLTNEAIVIPTQVNYVGKATNVYDAGYKLNGSAYVISKYISNTWLWDRVRVSGGAYGGFCDFDTHSGVFSFLSYRDPNLLKTLEVYDGTGDFLRELEIDDDTLTKAIIGTIGDVDSYQLPDAKGYSSMLRYILGITEEERQKRRGEILSTSLKDFKQFIDAMEAVKDKGVVVAVASPDDVDAANKEISNFFQIKKAL*