AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1298170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298170 MtrunA17_Chr4g0055551 96.053 304 11 1 1 303 1 304 0.0 598
Msa1298170 MtrunA17_Chr1g0207341 41.270 189 109 2 101 287 153 341 8.81e-48 164
Msa1298170 MtrunA17_Chr7g0272191 46.286 175 91 2 112 283 119 293 3.96e-44 153
Msa1298170 MtrunA17_Chr4g0038261 36.975 238 123 5 46 282 5 216 2.46e-40 140
Msa1298170 MtrunA17_Chr4g0056771 37.234 188 110 1 103 290 95 274 6.02e-38 135
Msa1298170 MtrunA17_Chr7g0270061 37.113 194 107 2 98 284 96 281 1.07e-36 133
Msa1298170 MtrunA17_Chr7g0251451 37.778 180 104 1 103 282 79 250 3.06e-36 131
Msa1298170 MtrunA17_Chr1g0194601 36.598 194 108 2 98 284 99 284 4.32e-36 131
Msa1298170 MtrunA17_Chr5g0409311 36.612 183 108 1 103 285 88 262 2.91e-33 124
Msa1298170 MtrunA17_Chr4g0034751 33.880 183 113 1 103 285 99 273 2.26e-31 118
Msa1298170 MtrunA17_Chr4g0015831 29.508 122 78 1 89 210 8 121 4.02e-14 67.8
Msa1298170 MtrunA17_CPg0492721 29.508 122 78 1 89 210 8 121 4.02e-14 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298170 AT4G17040.1 75.175 286 68 2 20 303 21 305 9.24e-151 425
Msa1298170 AT1G09130.2 46.766 201 100 4 100 297 118 314 9.13e-54 178
Msa1298170 AT1G09130.1 46.766 201 100 4 100 297 118 314 9.13e-54 178
Msa1298170 AT1G09130.3 46.766 201 100 4 100 297 118 314 3.15e-53 178
Msa1298170 AT1G49970.1 48.087 183 93 2 101 281 169 351 3.32e-49 168
Msa1298170 AT5G23140.1 40.761 184 100 2 103 286 48 222 3.14e-43 148
Msa1298170 AT1G12410.1 37.766 188 109 1 103 290 89 268 1.46e-38 137
Msa1298170 AT1G02560.1 33.452 281 167 4 12 284 19 287 2.27e-38 137
Msa1298170 AT5G45390.1 37.222 180 105 1 103 282 79 250 4.18e-35 129
Msa1298170 AT1G66670.1 34.444 180 110 1 103 282 85 256 4.33e-32 121
Msa1298170 AT1G11750.1 32.973 185 116 1 101 285 94 270 2.51e-30 115
Msa1298170 AT1G11750.2 32.973 185 116 1 101 285 112 288 4.12e-30 115
Msa1298170 ATCG00670.1 29.016 193 124 3 90 281 13 193 1.67e-26 103

Find 100 sgRNAs with CRISPR-Local

Find 500 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGTTTATGTACAGATAAA+TGG 0.194117 8_3:+58883910 None:intergenic
TGATGGGTCTGATAGGGGTT+AGG 0.281995 8_3:+58886165 None:intergenic
AGTTGTTTCTGACCTTAAAA+AGG 0.300292 8_3:-58880153 Msa1298170:CDS
CTCTCTGCGTTGGCAATGCT+TGG 0.303068 8_3:-58881301 Msa1298170:CDS
GGGAGAGGCAGCCTTACTTT+TGG 0.318790 8_3:-58881279 Msa1298170:CDS
CACTTGGACTAAAATACTTT+GGG 0.321699 8_3:+58880318 None:intergenic
CCAAGTGAAGCTGTTGAGTA+TGG 0.336233 8_3:-58880302 Msa1298170:CDS
TCCATCTGTTACAGAGTTGA+TGG 0.354136 8_3:-58883975 Msa1298170:CDS
GAGGATTTGATGGGTCTGAT+AGG 0.355717 8_3:+58886158 None:intergenic
CAGCCTATTGCGCGGTTTCA+AGG 0.358842 8_3:-58881104 Msa1298170:CDS
AATTTCATATTTGAATGAAC+TGG 0.365346 8_3:+58878937 None:intergenic
TCACTTGGACTAAAATACTT+TGG 0.371602 8_3:+58880317 None:intergenic
ATCACTAACCTTTGTTGTTC+CGG 0.377807 8_3:+58883886 None:intergenic
AGCGACGAAATCGGTGGAAA+TGG 0.379765 8_3:+58886124 None:intergenic
CTGCTTGAAATGTGTTAACT+TGG 0.384225 8_3:+58878843 None:intergenic
GAGTTTATGTACAGATAAAT+GGG 0.390251 8_3:+58883911 None:intergenic
GTACAATGAGAGGGGCTCTA+AGG 0.390258 8_3:-58880183 Msa1298170:CDS
TCTCTGCGTTGGCAATGCTT+GGG 0.392552 8_3:-58881300 Msa1298170:CDS
TGACCTTGAAACCGCGCAAT+AGG 0.407017 8_3:+58881101 None:intergenic
CATGGGTTTGTTTGATAAGA+AGG 0.425617 8_3:+58886214 None:intergenic
AGGATTTGATGGGTCTGATA+GGG 0.433341 8_3:+58886159 None:intergenic
GATGGGTCTGATAGGGGTTA+GGG 0.433564 8_3:+58886166 None:intergenic
AGCAGATTGAAGCTGATATT+CGG 0.440887 8_3:-58880343 Msa1298170:CDS
TACCTCAACTTCAAGAAAAG+AGG 0.445154 8_3:+58880098 None:intergenic
CTTTCAGGGAGGTGAGAAGT+TGG 0.446585 8_3:-58882171 Msa1298170:intron
GTTTCTGAAAGAGGATTTGA+TGG 0.446685 8_3:+58886148 None:intergenic
CACTAGAGTGAAGACAGAAT+TGG 0.449509 8_3:-58881045 Msa1298170:intron
TTTCAGGGAGGTGAGAAGTT+GGG 0.452298 8_3:-58882170 Msa1298170:intron
TTGTTTCATCGTCATATTGA+AGG 0.457683 8_3:+58883936 None:intergenic
TAAAAGAGGAGTCGTTACTA+TGG 0.462951 8_3:-58886006 Msa1298170:intron
ACAAACGCAATAGCCAAATT+CGG 0.465595 8_3:-58878881 Msa1298170:three_prime_UTR
AGTTCCACTAGTAATTTCTC+TGG 0.465833 8_3:-58886083 Msa1298170:CDS
CTTATCATTATAGTTGATGA+TGG 0.470041 8_3:+58881224 None:intergenic
GGCACAGCTTATTTGACCGC+TGG 0.471577 8_3:-58880132 Msa1298170:exon
CCCGCGACGTTTCAAAGCTC+CGG 0.479421 8_3:-58886032 Msa1298170:CDS
GGATTTGATGGGTCTGATAG+GGG 0.482645 8_3:+58886160 None:intergenic
CGTGGAAGGAGCGACGAAAT+CGG 0.485145 8_3:+58886115 None:intergenic
TATTTCCCTCCCTTAAGAAA+AGG 0.487419 8_3:-58879014 Msa1298170:three_prime_UTR
CCATACTCAACAGCTTCACT+TGG 0.491392 8_3:+58880302 None:intergenic
CATGCAGTCCCTCTTGAGAA+AGG 0.492109 8_3:+58884070 None:intergenic
TACAGGTAAGAAGCTAAGTC+TGG 0.492907 8_3:+58884034 None:intergenic
CGTTGGCAATGCTTGGGGAG+AGG 0.494410 8_3:-58881294 Msa1298170:CDS
CTCCCTTAAGAAAAGGTAGT+AGG 0.499002 8_3:-58879007 Msa1298170:three_prime_UTR
ACCTCAACTTCAAGAAAAGA+GGG 0.500938 8_3:+58880099 None:intergenic
GGAAATGGAGTTTCTGAAAG+AGG 0.503787 8_3:+58886139 None:intergenic
GAAGGTGAAAGATGCGTTTG+CGG 0.506086 8_3:+58886232 None:intergenic
TGCACCAGCAGCCAAAAGTA+AGG 0.509782 8_3:+58881268 None:intergenic
CGATTTCGTCGCTCCTTCCA+CGG 0.510311 8_3:-58886114 Msa1298170:CDS
TTTGAAACGTCGCGGGATTG+AGG 0.512001 8_3:+58886039 None:intergenic
CAAAGCTCCGGCGGTAAAAG+AGG 0.512714 8_3:-58886020 Msa1298170:CDS
CTTTCTCAAGAGGGACTGCA+TGG 0.514476 8_3:-58884069 Msa1298170:CDS
ATATCAGCTTCAATCTGCTC+AGG 0.516570 8_3:+58880347 None:intergenic
GTACACTTAATTAGCAACAT+TGG 0.516924 8_3:-58879066 Msa1298170:three_prime_UTR
GCACAGCTTATTTGACCGCT+GGG 0.523713 8_3:-58880131 Msa1298170:exon
GTTAGGGTTCGTGATGAAGA+GGG 0.526254 8_3:+58886182 None:intergenic
TAATTAAGTGTACAAGTGCT+TGG 0.532430 8_3:+58879076 None:intergenic
GGTTAGGGTTCGTGATGAAG+AGG 0.534675 8_3:+58886181 None:intergenic
GCAGGTGTTGTACAATGAGA+GGG 0.541340 8_3:-58880192 Msa1298170:intron
TGCAGGTGTTGTACAATGAG+AGG 0.548770 8_3:-58880193 Msa1298170:intron
CTCTGCGTTGGCAATGCTTG+GGG 0.548984 8_3:-58881299 Msa1298170:CDS
CCGGAGCTTTGAAACGTCGC+GGG 0.552666 8_3:+58886032 None:intergenic
TGAAGAGGGTGAAATGAGCA+TGG 0.558343 8_3:+58886196 None:intergenic
AGGGAGGGAAATACAGTCTA+CGG 0.558497 8_3:+58879024 None:intergenic
CGGGATTGAGGCACGGAGGA+CGG 0.560093 8_3:+58886051 None:intergenic
ATCAACTATAATGATAAGAC+AGG 0.560171 8_3:-58881219 Msa1298170:intron
TTGCAGTTTATGATTTGATG+AGG 0.568470 8_3:-58882130 Msa1298170:intron
TAGGTTATTCCTTTCTCAAG+AGG 0.571434 8_3:-58884079 Msa1298170:CDS
AGGTTATTCCTTTCTCAAGA+GGG 0.573523 8_3:-58884078 Msa1298170:CDS
GTTTGCGGTTGCAACCTCCA+TGG 0.577625 8_3:+58886247 None:intergenic
TTTCTCAAGAGGGACTGCAT+GGG 0.580047 8_3:-58884068 Msa1298170:CDS
ACCATCAACTCTGTAACAGA+TGG 0.580533 8_3:+58883974 None:intergenic
TGAACAAAACGAACGAACCA+TGG 0.585494 8_3:-58886264 Msa1298170:exon
TAAGAAGCTAAGTCTGGTGG+AGG 0.595854 8_3:+58884040 None:intergenic
TAAGGTCAGAAACAACTCCA+TGG 0.601923 8_3:+58880159 None:intergenic
ACTAACCTTTGTTGTTCCGG+TGG 0.613992 8_3:+58883889 None:intergenic
AGGTAAGAAGCTAAGTCTGG+TGG 0.621610 8_3:+58884037 None:intergenic
TATCTGTACATAAACTCCAC+CGG 0.621927 8_3:-58883905 Msa1298170:CDS
GAACTACTGATTGCCGTGGA+AGG 0.625527 8_3:+58886101 None:intergenic
TTTCTGAAAGAGGATTTGAT+GGG 0.625809 8_3:+58886149 None:intergenic
GAGAGGGGCTCTAAGGACCA+TGG 0.632618 8_3:-58880176 Msa1298170:CDS
AGTCTACGGTGTTATAAACA+TGG 0.633480 8_3:+58879038 None:intergenic
GAAGGGACATAGACTCACTC+TGG 0.637286 8_3:-58878801 Msa1298170:three_prime_UTR
AAACTCCACCGGAACAACAA+AGG 0.638142 8_3:-58883894 Msa1298170:intron
GAAGAGGGTGAAATGAGCAT+GGG 0.645982 8_3:+58886197 None:intergenic
AACGTCGCGGGATTGAGGCA+CGG 0.648196 8_3:+58886044 None:intergenic
GTGACCAGAGAAATTACTAG+TGG 0.649718 8_3:+58886079 None:intergenic
AAGTGTACAAGTGCTTGGCA+CGG 0.650770 8_3:+58879081 None:intergenic
TCAATTTGCAGCCTATTGCG+CGG 0.651428 8_3:-58881112 Msa1298170:intron
CAGGTGTTGTACAATGAGAG+GGG 0.651553 8_3:-58880191 Msa1298170:CDS
AGTGGAACTACTGATTGCCG+TGG 0.654345 8_3:+58886097 None:intergenic
GCCGGAGCTTTGAAACGTCG+CGG 0.654571 8_3:+58886031 None:intergenic
GAATGAACTGGAATACAACA+AGG 0.657885 8_3:+58878949 None:intergenic
CATGACCACAGAAATTTGTG+CGG 0.658827 8_3:-58879160 Msa1298170:intron
GGAAGGAGCGACGAAATCGG+TGG 0.660421 8_3:+58886118 None:intergenic
TTGATGATGGCAAAGCAGAA+CGG 0.665478 8_3:+58881237 None:intergenic
GCGACGTTTCAAAGCTCCGG+CGG 0.712932 8_3:-58886029 Msa1298170:CDS
TGAGTATGGAATCATAGACA+AGG 0.714132 8_3:-58880288 Msa1298170:intron
ACAAAACGAACGAACCATGG+AGG 0.736733 8_3:-58886261 Msa1298170:exon
GTCGCGGGATTGAGGCACGG+AGG 0.746029 8_3:+58886047 None:intergenic
AGAGGGATTTAACTTCCCAG+CGG 0.759377 8_3:+58880116 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGAAATATATACAAAAA+GGG + chr8_3:58879475-58879494 None:intergenic 10.0%
!!! TTTTTGTATATATTTCATAT+GGG - chr8_3:58879475-58879494 Msa1298170:intron 10.0%
!! AAAAAATCATATTAAGTTAT+GGG + chr8_3:58880153-58880172 None:intergenic 10.0%
!! AAAAAAATCATATTAAGTTA+TGG + chr8_3:58880154-58880173 None:intergenic 10.0%
!! AATAATGAGATAAATAATAA+GGG + chr8_3:58880216-58880235 None:intergenic 10.0%
!! AAATAATGAGATAAATAATA+AGG + chr8_3:58880217-58880236 None:intergenic 10.0%
!!! TTTTGATTTTAAATAAAAAG+AGG + chr8_3:58880805-58880824 None:intergenic 10.0%
!!! AAAAAAATGTTTTTTTTTTG+TGG + chr8_3:58881362-58881381 None:intergenic 10.0%
!! TTAAAAAATGAACTAAAAAA+AGG + chr8_3:58882460-58882479 None:intergenic 10.0%
!! AAAAATGTTAAAGTTATTTA+TGG + chr8_3:58882500-58882519 None:intergenic 10.0%
!! ATAAAATAAAATAAATGACA+GGG + chr8_3:58882978-58882997 None:intergenic 10.0%
!! TAATGTCAAATATTAATTAA+TGG - chr8_3:58883570-58883589 Msa1298170:intron 10.0%
!! AATCTAATTTAACATAATTA+TGG - chr8_3:58884064-58884083 Msa1298170:CDS 10.0%
!! CATATGAAATATATACAAAA+AGG + chr8_3:58879476-58879495 None:intergenic 15.0%
!!! CTTTTTGTATATATTTCATA+TGG - chr8_3:58879474-58879493 Msa1298170:intron 15.0%
!!! TATTTCTTGTTTTTGTTTTT+TGG - chr8_3:58879499-58879518 Msa1298170:intron 15.0%
!! TTAAAATCAAAAACTTTAAC+TGG - chr8_3:58880813-58880832 Msa1298170:intron 15.0%
!!! AGTATTATTTCTTATGAAAA+AGG + chr8_3:58881233-58881252 None:intergenic 15.0%
!!! TAGAAATTTTTGAAAAAAAG+TGG + chr8_3:58882315-58882334 None:intergenic 15.0%
!!! TTTTTCAAAAATTTCTAATG+AGG - chr8_3:58882318-58882337 Msa1298170:intron 15.0%
!! TATCTAATAAGAATTATTTG+TGG + chr8_3:58882803-58882822 None:intergenic 15.0%
!! CTTATTAGATATTAAAACAA+TGG - chr8_3:58882812-58882831 Msa1298170:intron 15.0%
!! GATAAAATAAAATAAATGAC+AGG + chr8_3:58882979-58882998 None:intergenic 15.0%
!!! TTATTTTATCATACTTTTGT+TGG - chr8_3:58882989-58883008 Msa1298170:intron 15.0%
!!! TATTTTATCATACTTTTGTT+GGG - chr8_3:58882990-58883009 Msa1298170:intron 15.0%
!!! CTAGAATTTTCTTTATTTTT+AGG - chr8_3:58883311-58883330 Msa1298170:intron 15.0%
!! AATACAAATAAAATAGAGAA+AGG + chr8_3:58883471-58883490 None:intergenic 15.0%
!!! ATCATATTTTTAACATGTAT+GGG + chr8_3:58883510-58883529 None:intergenic 15.0%
!!! ATCACACTTAATTTTTTAAA+TGG + chr8_3:58884257-58884276 None:intergenic 15.0%
!!! ATTTTAAAATATATTCGAGA+GGG + chr8_3:58884386-58884405 None:intergenic 15.0%
!!! TATTTTAAAATATATTCGAG+AGG + chr8_3:58884387-58884406 None:intergenic 15.0%
!!! GGTATATAATGTTTTTTTAA+TGG - chr8_3:58885855-58885874 Msa1298170:intron 15.0%
!!! GTTTGTAATAATTTCAAGTA+TGG - chr8_3:58879152-58879171 Msa1298170:three_prime_UTR 20.0%
!! TGATTGAAAAAAAAGTTTCT+TGG - chr8_3:58879265-58879284 Msa1298170:intron 20.0%
!!! TCATTTTTTACTTTAAGCTT+AGG - chr8_3:58879974-58879993 Msa1298170:intron 20.0%
!! TAAAACCATTCTAAATACAA+GGG - chr8_3:58880552-58880571 Msa1298170:intron 20.0%
!! CATAATATATAAATCATGCA+TGG + chr8_3:58880848-58880867 None:intergenic 20.0%
!! CATGCATGATTTATATATTA+TGG - chr8_3:58880846-58880865 Msa1298170:intron 20.0%
!! CACATATGTACAATAATTTA+TGG - chr8_3:58880884-58880903 Msa1298170:intron 20.0%
!!! TATTCATTTTTTCTTGTCTT+TGG - chr8_3:58880955-58880974 Msa1298170:intron 20.0%
!! AAAAATCGAATTGTTTACTT+GGG - chr8_3:58881048-58881067 Msa1298170:CDS 20.0%
!!! ACATTTTTTTTTTTATGTCC+TGG - chr8_3:58881269-58881288 Msa1298170:CDS 20.0%
!!! AAAATGTTTTTTTTTTGTGG+TGG + chr8_3:58881359-58881378 None:intergenic 20.0%
!!! AACAATAAACGTTTTTTTAG+TGG - chr8_3:58881458-58881477 Msa1298170:intron 20.0%
!!! ACATATTTTACTTAAAGAAG+TGG + chr8_3:58881557-58881576 None:intergenic 20.0%
!! TATAATTGTGATATAGACAT+AGG - chr8_3:58881804-58881823 Msa1298170:intron 20.0%
!! ATAATTGTGATATAGACATA+GGG - chr8_3:58881805-58881824 Msa1298170:intron 20.0%
!!! ATTTTTGAAAAAAAGTGGAA+GGG + chr8_3:58882310-58882329 None:intergenic 20.0%
!!! AATTTTTGAAAAAAAGTGGA+AGG + chr8_3:58882311-58882330 None:intergenic 20.0%
!! ACAAGATTCTATTAAACAAA+CGG + chr8_3:58882861-58882880 None:intergenic 20.0%
!!! TCTCTATTTTATTTGTATTC+TGG - chr8_3:58883472-58883491 Msa1298170:intron 20.0%
!!! TCATATTTTTAACATGTATG+GGG + chr8_3:58883509-58883528 None:intergenic 20.0%
!!! CATCATATTTTTAACATGTA+TGG + chr8_3:58883511-58883530 None:intergenic 20.0%
!! ATCTATTGTTAGTGTTTAAA+TGG - chr8_3:58883536-58883555 Msa1298170:intron 20.0%
!! AAACTGAGTACATTATTAAA+TGG + chr8_3:58883876-58883895 None:intergenic 20.0%
!!! TTTTAAAATATATTCGAGAG+GGG + chr8_3:58884385-58884404 None:intergenic 20.0%
!! AAGAAAAAAACATCTAGTTA+TGG + chr8_3:58884802-58884821 None:intergenic 20.0%
!!! ATAACTAGATGTTTTTTTCT+TGG - chr8_3:58884801-58884820 Msa1298170:intron 20.0%
!!! TTTAGTAAATGTTGGTTAAT+GGG + chr8_3:58885072-58885091 None:intergenic 20.0%
!!! ATTTAGTAAATGTTGGTTAA+TGG + chr8_3:58885073-58885092 None:intergenic 20.0%
!!! TATTATTCATAAGCTTGTTA+AGG - chr8_3:58885630-58885649 Msa1298170:intron 20.0%
!! AATTTCATATTTGAATGAAC+TGG + chr8_3:58886124-58886143 None:intergenic 20.0%
!!! TTTCAAGTATGGTTTTGTAA+CGG - chr8_3:58879163-58879182 Msa1298170:intron 25.0%
!!! TTTGTTTTGCGAAAGAATAT+TGG - chr8_3:58879194-58879213 Msa1298170:intron 25.0%
! AATGTCGAAATCAAAAATCA+AGG - chr8_3:58879351-58879370 Msa1298170:intron 25.0%
!! GAATTTAAAGTTTATGAGTC+AGG + chr8_3:58879583-58879602 None:intergenic 25.0%
!! TACATGAAAAGTGTAAAATC+AGG - chr8_3:58879633-58879652 Msa1298170:intron 25.0%
! GAATATACTCTAGATATCAT+AGG + chr8_3:58879788-58879807 None:intergenic 25.0%
!!! TTTTAGCTTCTGTTTTTGTT+AGG - chr8_3:58879906-58879925 Msa1298170:intron 25.0%
! AGATACCATATTGAAGTTAT+AGG + chr8_3:58880249-58880268 None:intergenic 25.0%
! GTAAAACCATTCTAAATACA+AGG - chr8_3:58880551-58880570 Msa1298170:intron 25.0%
! TAAGCAAAACTTATAACTCA+AGG + chr8_3:58880696-58880715 None:intergenic 25.0%
!! GAGTTATAAGTTTTGCTTAA+CGG - chr8_3:58880697-58880716 Msa1298170:intron 25.0%
! AAAACTTTAACTGGTAATAC+TGG - chr8_3:58880822-58880841 Msa1298170:intron 25.0%
! TATTGTACATATGTGTTGTA+TGG + chr8_3:58880879-58880898 None:intergenic 25.0%
!!! ATTTTTTCTTGTCTTTGGAT+AGG - chr8_3:58880960-58880979 Msa1298170:intron 25.0%
!! AAACAATTCGATTTTTGTAC+AGG + chr8_3:58881044-58881063 None:intergenic 25.0%
! CAAAAATCGAATTGTTTACT+TGG - chr8_3:58881047-58881066 Msa1298170:CDS 25.0%
! GAGTTTATGTACAGATAAAT+GGG + chr8_3:58881150-58881169 None:intergenic 25.0%
! AAATAATACTTCTCATAGCA+TGG - chr8_3:58881243-58881262 Msa1298170:CDS 25.0%
! AGTGTGAATGCATTTATTTA+AGG - chr8_3:58881582-58881601 Msa1298170:intron 25.0%
!! AAACAGGTCTAACTTTAAAA+AGG + chr8_3:58881677-58881696 None:intergenic 25.0%
! TTCAAAAATTTCTAATGAGG+AGG - chr8_3:58882321-58882340 Msa1298170:intron 25.0%
! TCAAAAATTTCTAATGAGGA+GGG - chr8_3:58882322-58882341 Msa1298170:intron 25.0%
!!! TACTATTCTGTATTTTAGCT+CGG - chr8_3:58882630-58882649 Msa1298170:intron 25.0%
! TTTAATACAAACTTTCTGCA+GGG + chr8_3:58883687-58883706 None:intergenic 25.0%
! ATTTAATACAAACTTTCTGC+AGG + chr8_3:58883688-58883707 None:intergenic 25.0%
!!! CTTATCATTATAGTTGATGA+TGG + chr8_3:58883837-58883856 None:intergenic 25.0%
! ATCAACTATAATGATAAGAC+AGG - chr8_3:58883839-58883858 Msa1298170:intron 25.0%
!!! CTCAGTTTATTTTATGTCTT+CGG - chr8_3:58883888-58883907 Msa1298170:intron 25.0%
!!! CTTACATTTTGATATTTCAG+TGG + chr8_3:58884162-58884181 None:intergenic 25.0%
! CACTGAAATATCAAAATGTA+AGG - chr8_3:58884160-58884179 Msa1298170:intron 25.0%
!! TTTAAAATATATTCGAGAGG+GGG + chr8_3:58884384-58884403 None:intergenic 25.0%
!! ACCAAAAAATTATTTTCCCA+CGG + chr8_3:58884477-58884496 None:intergenic 25.0%
! CCATAGTAATAAGTTAAAGA+TGG + chr8_3:58884624-58884643 None:intergenic 25.0%
!! CCATCTTTAACTTATTACTA+TGG - chr8_3:58884621-58884640 Msa1298170:intron 25.0%
!! ACACTGTTTGATTTATTTCA+AGG - chr8_3:58884656-58884675 Msa1298170:intron 25.0%
! ACCAAGCAAACTAAAATATA+TGG - chr8_3:58884836-58884855 Msa1298170:intron 25.0%
!!! ACCATATATTTTAGTTTGCT+TGG + chr8_3:58884840-58884859 None:intergenic 25.0%
!! AAAATATATGGTCTTTTTGC+AGG - chr8_3:58884848-58884867 Msa1298170:intron 25.0%
!!! ATATAATGGGTATTTGAAAG+TGG - chr8_3:58885238-58885257 Msa1298170:intron 25.0%
! TCTAATTTATTGAGCTTCTT+TGG - chr8_3:58885324-58885343 Msa1298170:intron 25.0%
! CTAATTTATTGAGCTTCTTT+GGG - chr8_3:58885325-58885344 Msa1298170:intron 25.0%
! GCAAAGCATAATAAATAAGT+AGG - chr8_3:58885466-58885485 Msa1298170:intron 25.0%
! TCTGCTAATTGAGTTAAAAA+TGG - chr8_3:58886280-58886299 Msa1298170:five_prime_UTR 25.0%
!! AAAATGAGAGAGAGTTTTGA+GGG + chr8_3:58878750-58878769 None:intergenic 30.0%
! TTTCTGAAAGAGGATTTGAT+GGG + chr8_3:58878912-58878931 None:intergenic 30.0%
! ATTGGTTGATTTACTTGTGT+TGG - chr8_3:58879212-58879231 Msa1298170:intron 30.0%
TGATTTACTTGTGTTGGATA+AGG - chr8_3:58879218-58879237 Msa1298170:intron 30.0%
!! AGTTTCTTGGTTTTCTTTCA+TGG - chr8_3:58879278-58879297 Msa1298170:intron 30.0%
CTAAGAGTTATGAAATGGAT+TGG - chr8_3:58879301-58879320 Msa1298170:intron 30.0%
!! AAAGCACACTTTTTGTTTGT+TGG - chr8_3:58879385-58879404 Msa1298170:intron 30.0%
AATGCAAATGCTTAGATTGT+AGG - chr8_3:58879443-58879462 Msa1298170:intron 30.0%
ATGCAAATGCTTAGATTGTA+GGG - chr8_3:58879444-58879463 Msa1298170:intron 30.0%
!!! TGTTTTTTGGAACAGAAACA+AGG - chr8_3:58879512-58879531 Msa1298170:intron 30.0%
! TCTAGAGTATATTCGATTCT+AGG - chr8_3:58879794-58879813 Msa1298170:intron 30.0%
!!! ATTTTTGCTTCAGTTTTGAG+TGG - chr8_3:58879944-58879963 Msa1298170:intron 30.0%
ATAAGCTTAACCATTCCATA+AGG + chr8_3:58880009-58880028 None:intergenic 30.0%
AGTAGTTAAGTCTTGAGTTA+TGG - chr8_3:58880043-58880062 Msa1298170:intron 30.0%
GTAGTTAAGTCTTGAGTTAT+GGG - chr8_3:58880044-58880063 Msa1298170:intron 30.0%
TGATGCCTATAACTTCAATA+TGG - chr8_3:58880241-58880260 Msa1298170:intron 30.0%
CTAGGAAGTTGTACAATTAA+AGG + chr8_3:58880456-58880475 None:intergenic 30.0%
GCTTACTTGCTTATATTAAG+TGG - chr8_3:58880665-58880684 Msa1298170:intron 30.0%
TTGTTTCATCGTCATATTGA+AGG + chr8_3:58881125-58881144 None:intergenic 30.0%
GGAGTTTATGTACAGATAAA+TGG + chr8_3:58881151-58881170 None:intergenic 30.0%
AACATGGAAATGTTGTAAGA+AGG - chr8_3:58881435-58881454 Msa1298170:intron 30.0%
!!! TAAACGTTTTTTTAGTGGAG+TGG - chr8_3:58881463-58881482 Msa1298170:intron 30.0%
!!! AAACGTTTTTTTAGTGGAGT+GGG - chr8_3:58881464-58881483 Msa1298170:intron 30.0%
TTGAACTGTTGTATCTACTT+TGG + chr8_3:58881529-58881548 None:intergenic 30.0%
TAACTTTGATTACACAGCAA+CGG + chr8_3:58881640-58881659 None:intergenic 30.0%
!!! CTTGAATTTTTTTGGACTGA+GGG + chr8_3:58881708-58881727 None:intergenic 30.0%
!!! TCTTGAATTTTTTTGGACTG+AGG + chr8_3:58881709-58881728 None:intergenic 30.0%
AGTCCAAAAAAATTCAAGAG+TGG - chr8_3:58881710-58881729 Msa1298170:intron 30.0%
! TCTCAATCAAATGAAAGCAT+GGG + chr8_3:58881870-58881889 None:intergenic 30.0%
ATCTCAATCAAATGAAAGCA+TGG + chr8_3:58881871-58881890 None:intergenic 30.0%
TTCTCAAATGACCTCATAAA+AGG - chr8_3:58882105-58882124 Msa1298170:intron 30.0%
TGCTTCTCAATATACTGTTA+AGG - chr8_3:58882239-58882258 Msa1298170:intron 30.0%
CAAAAATTTCTAATGAGGAG+GGG - chr8_3:58882323-58882342 Msa1298170:intron 30.0%
GTTAGAAAAAGAGTTTGAGA+CGG + chr8_3:58882367-58882386 None:intergenic 30.0%
!!! TGATTTTTTGTTTTCGCAAG+AGG + chr8_3:58882427-58882446 None:intergenic 30.0%
AAGAGATCAAGTTTCTACTT+AGG + chr8_3:58882721-58882740 None:intergenic 30.0%
TAAACAAACGGATCTATTCA+TGG + chr8_3:58882849-58882868 None:intergenic 30.0%
! AATCTTGTTTCCTTCTTTCA+GGG - chr8_3:58882873-58882892 Msa1298170:intron 30.0%
TTGCAGTTTATGATTTGATG+AGG - chr8_3:58882928-58882947 Msa1298170:intron 30.0%
TTAGTGTTTAAATGGACAAC+TGG - chr8_3:58883544-58883563 Msa1298170:intron 30.0%
AAGATAATATGCCTCTTCTT+TGG + chr8_3:58883633-58883652 None:intergenic 30.0%
AATAGGCTGCAAATTGAAAA+GGG + chr8_3:58883943-58883962 None:intergenic 30.0%
! TAGTGATTTCTTTTCTTGCA+AGG + chr8_3:58883998-58884017 None:intergenic 30.0%
GCTAGATTTACAAATAACAG+TGG + chr8_3:58884105-58884124 None:intergenic 30.0%
TCAAAATGTAAGGTTGTGTT+TGG - chr8_3:58884170-58884189 Msa1298170:intron 30.0%
!!! TCCGTGGGAAAATAATTTTT+TGG - chr8_3:58884473-58884492 Msa1298170:intron 30.0%
!! AAGCTTCTTGCTTTGAAATA+TGG - chr8_3:58884572-58884591 Msa1298170:intron 30.0%
CACTTGGACTAAAATACTTT+GGG + chr8_3:58884743-58884762 None:intergenic 30.0%
TCACTTGGACTAAAATACTT+TGG + chr8_3:58884744-58884763 None:intergenic 30.0%
!!! AGATGTTTTTTTCTTGGAGT+CGG - chr8_3:58884807-58884826 Msa1298170:intron 30.0%
!! AGTTGTTTCTGACCTTAAAA+AGG - chr8_3:58884905-58884924 Msa1298170:intron 30.0%
! AAATAAGCTGTGCCTTTTTA+AGG + chr8_3:58884920-58884939 None:intergenic 30.0%
CCACAAGATTTAGTAAATGT+TGG + chr8_3:58885080-58885099 None:intergenic 30.0%
CCAACATTTACTAAATCTTG+TGG - chr8_3:58885077-58885096 Msa1298170:intron 30.0%
GTTCTTCATTATTATTTGCC+TGG - chr8_3:58885099-58885118 Msa1298170:intron 30.0%
TTTAGATGTCACAAATAACC+AGG + chr8_3:58885120-58885139 None:intergenic 30.0%
GATGAAAAAAAATGCAATCC+TGG + chr8_3:58885161-58885180 None:intergenic 30.0%
! CACACTTAACATTATGCTTT+TGG - chr8_3:58885197-58885216 Msa1298170:intron 30.0%
ATGAATCATTTACTCATGGT+TGG + chr8_3:58885277-58885296 None:intergenic 30.0%
AGACATGAATCATTTACTCA+TGG + chr8_3:58885281-58885300 None:intergenic 30.0%
ATGATTCATGTCTGTGTAAA+AGG - chr8_3:58885288-58885307 Msa1298170:intron 30.0%
TGATTCATGTCTGTGTAAAA+GGG - chr8_3:58885289-58885308 Msa1298170:intron 30.0%
GCTCAATAAATTAGAGCTTT+AGG + chr8_3:58885319-58885338 None:intergenic 30.0%
TTACACAATTTAAGAGTGAG+AGG + chr8_3:58885374-58885393 None:intergenic 30.0%
TAAAAAGAGAATAGACACGA+TGG + chr8_3:58885432-58885451 None:intergenic 30.0%
GGGTAAACAATGAAATCTTA+TGG + chr8_3:58885530-58885549 None:intergenic 30.0%
ACCAGATTCCTAATGATAAA+GGG - chr8_3:58885552-58885571 Msa1298170:intron 30.0%
GCAAAAGTAAGATATCACAA+GGG - chr8_3:58885780-58885799 Msa1298170:intron 30.0%
!! AAATGGATTAGCAAAAACGA+AGG - chr8_3:58885923-58885942 Msa1298170:intron 30.0%
!! AATGGATTAGCAAAAACGAA+GGG - chr8_3:58885924-58885943 Msa1298170:intron 30.0%
TAATTAAGTGTACAAGTGCT+TGG + chr8_3:58885985-58886004 None:intergenic 30.0%
GTACACTTAATTAGCAACAT+TGG - chr8_3:58885992-58886011 Msa1298170:intron 30.0%
! TTCCTACTACCTTTTCTTAA+GGG + chr8_3:58886056-58886075 None:intergenic 30.0%
! GAAAATGAGAGAGAGTTTTG+AGG + chr8_3:58878751-58878770 None:intergenic 35.0%
! CATGGGTTTGTTTGATAAGA+AGG + chr8_3:58878847-58878866 None:intergenic 35.0%
! GTTTCTGAAAGAGGATTTGA+TGG + chr8_3:58878913-58878932 None:intergenic 35.0%
AGTTCCACTAGTAATTTCTC+TGG - chr8_3:58878975-58878994 Msa1298170:three_prime_UTR 35.0%
TAAAAGAGGAGTCGTTACTA+TGG - chr8_3:58879052-58879071 Msa1298170:three_prime_UTR 35.0%
CATGGCTAAGAGTTATGAAA+TGG - chr8_3:58879296-58879315 Msa1298170:intron 35.0%
GTCGAAATCAAAAATCAAGG+TGG - chr8_3:58879354-58879373 Msa1298170:intron 35.0%
!! ACACTTTTTGTTTGTTGGAG+AGG - chr8_3:58879390-58879409 Msa1298170:intron 35.0%
GAGAGGTTTAGTAGAATTGT+GGG - chr8_3:58879407-58879426 Msa1298170:intron 35.0%
AGAGGTTTAGTAGAATTGTG+GGG - chr8_3:58879408-58879427 Msa1298170:intron 35.0%
TGCAAATGCTTAGATTGTAG+GGG - chr8_3:58879445-58879464 Msa1298170:intron 35.0%
!!! TATGCCAACTTGTTTTGTCT+AGG - chr8_3:58879553-58879572 Msa1298170:intron 35.0%
TCTACCTAGACAAAACAAGT+TGG + chr8_3:58879560-58879579 None:intergenic 35.0%
GCAAAGAAACCCTAAAAAGT+GGG + chr8_3:58879841-58879860 None:intergenic 35.0%
AGCAAAGAAACCCTAAAAAG+TGG + chr8_3:58879842-58879861 None:intergenic 35.0%
!!! TAGCTTCTGTTTTTGTTAGG+TGG - chr8_3:58879909-58879928 Msa1298170:intron 35.0%
!!! TCTGTTTTTGTTAGGTGGTT+AGG - chr8_3:58879914-58879933 Msa1298170:intron 35.0%
GAGTTATGGGTTCTACTTAA+TGG - chr8_3:58880057-58880076 Msa1298170:intron 35.0%
! TCAATATGGTATCTAAAGCG+TGG - chr8_3:58880255-58880274 Msa1298170:intron 35.0%
TAAACAACGCGTAATCAAGT+AGG + chr8_3:58880287-58880306 None:intergenic 35.0%
TCTTAGCTTCTGCTTTAGTT+AGG - chr8_3:58880323-58880342 Msa1298170:CDS 35.0%
GGAGTAATAACGATCAATCT+AGG + chr8_3:58880474-58880493 None:intergenic 35.0%
TCACACCCTTGTATTTAGAA+TGG + chr8_3:58880560-58880579 None:intergenic 35.0%
!! AGCTTTACGTAGTTTTACAG+TGG - chr8_3:58880619-58880638 Msa1298170:intron 35.0%
! GAGTAGCGTATATTTTACCT+CGG + chr8_3:58880914-58880933 None:intergenic 35.0%
TAGGTTATTCCTTTCTCAAG+AGG - chr8_3:58880979-58880998 Msa1298170:intron 35.0%
AGGTTATTCCTTTCTCAAGA+GGG - chr8_3:58880980-58880999 Msa1298170:intron 35.0%
TATCTGTACATAAACTCCAC+CGG - chr8_3:58881153-58881172 Msa1298170:intron 35.0%
!! ATCACTAACCTTTGTTGTTC+CGG + chr8_3:58881175-58881194 None:intergenic 35.0%
GACAATGCATAGTATATGCA+AGG - chr8_3:58881314-58881333 Msa1298170:CDS 35.0%
!!! TGTTTTTTTTTTGTGGTGGC+CGG + chr8_3:58881355-58881374 None:intergenic 35.0%
!!! AACGTTTTTTTAGTGGAGTG+GGG - chr8_3:58881465-58881484 Msa1298170:intron 35.0%
!!! GAGCCACTCTTGAATTTTTT+TGG + chr8_3:58881716-58881735 None:intergenic 35.0%
GTGCATAGAAAATGAAACTC+TGG - chr8_3:58881894-58881913 Msa1298170:intron 35.0%
!! GACTTTTAGTGCTATTGACT+AGG - chr8_3:58882080-58882099 Msa1298170:intron 35.0%
AACAGTATATTGAGAAGCAG+AGG + chr8_3:58882238-58882257 None:intergenic 35.0%
TTTGAAAAAAAGTGGAAGGG+TGG + chr8_3:58882307-58882326 None:intergenic 35.0%
CAAGAGGATAACAAAGACTA+AGG + chr8_3:58882411-58882430 None:intergenic 35.0%
!!! GTATTTTAGCTCGGATTGTT+AGG - chr8_3:58882639-58882658 Msa1298170:intron 35.0%
TATTTGTGGATCTTTCTGCT+TGG + chr8_3:58882789-58882808 None:intergenic 35.0%
! GAATCTTGTTTCCTTCTTTC+AGG - chr8_3:58882872-58882891 Msa1298170:intron 35.0%
TTGGGTCTTAAACTGTATAC+TGG - chr8_3:58883008-58883027 Msa1298170:intron 35.0%
! TCTTAAACTGTATACTGGCT+AGG - chr8_3:58883013-58883032 Msa1298170:intron 35.0%
! CTTAAACTGTATACTGGCTA+GGG - chr8_3:58883014-58883033 Msa1298170:intron 35.0%
! TTAAACTGTATACTGGCTAG+GGG - chr8_3:58883015-58883034 Msa1298170:intron 35.0%
GTTAAACTACTTACACTGAC+TGG - chr8_3:58883050-58883069 Msa1298170:intron 35.0%
! GACAGATCAGCATTTTGTAA+CGG + chr8_3:58883361-58883380 None:intergenic 35.0%
ATAATATGCCTCTTCTTTGG+AGG + chr8_3:58883630-58883649 None:intergenic 35.0%
ATAGGCTGCAAATTGAAAAG+GGG + chr8_3:58883942-58883961 None:intergenic 35.0%
CAATAGGCTGCAAATTGAAA+AGG + chr8_3:58883944-58883963 None:intergenic 35.0%
AATGTAAGGTTGTGTTTGGA+TGG - chr8_3:58884174-58884193 Msa1298170:intron 35.0%
!!! ATCTCGACTTTTGTTGTTGA+AGG + chr8_3:58884502-58884521 None:intergenic 35.0%
AGCAGATTGAAGCTGATATT+CGG - chr8_3:58884715-58884734 Msa1298170:intron 35.0%
TGAGTATGGAATCATAGACA+AGG - chr8_3:58884770-58884789 Msa1298170:intron 35.0%
ACCTCAACTTCAAGAAAAGA+GGG + chr8_3:58884962-58884981 None:intergenic 35.0%
TACCTCAACTTCAAGAAAAG+AGG + chr8_3:58884963-58884982 None:intergenic 35.0%
AAGTTGAGGTAAAGTACATC+TGG - chr8_3:58884972-58884991 Msa1298170:intron 35.0%
AACTTAATGCATGTGAAACC+AGG - chr8_3:58885140-58885159 Msa1298170:intron 35.0%
TGCTAGTTGCTGCTATATAA+TGG - chr8_3:58885224-58885243 Msa1298170:intron 35.0%
GCTAGTTGCTGCTATATAAT+GGG - chr8_3:58885225-58885244 Msa1298170:intron 35.0%
GAAATCTTATGGCCATGAAA+AGG + chr8_3:58885519-58885538 None:intergenic 35.0%
TATCATTAGGAATCTGGTGT+GGG + chr8_3:58885550-58885569 None:intergenic 35.0%
TTATCATTAGGAATCTGGTG+TGG + chr8_3:58885551-58885570 None:intergenic 35.0%
CACCAGATTCCTAATGATAA+AGG - chr8_3:58885551-58885570 Msa1298170:intron 35.0%
ACCCTTTATCATTAGGAATC+TGG + chr8_3:58885556-58885575 None:intergenic 35.0%
TTGCATAAGCTCAATCCAAA+CGG + chr8_3:58885579-58885598 None:intergenic 35.0%
CAAAATAAGCTCAGTCCAAA+CGG - chr8_3:58885756-58885775 Msa1298170:intron 35.0%
AAAATAAGCTCAGTCCAAAC+GGG - chr8_3:58885757-58885776 Msa1298170:intron 35.0%
GGCAAAAGTAAGATATCACA+AGG - chr8_3:58885779-58885798 Msa1298170:intron 35.0%
TTAGAATGGTCACAATTGCT+TGG - chr8_3:58885807-58885826 Msa1298170:intron 35.0%
GGCTGTTTGGTATATTTGTT+TGG - chr8_3:58885834-58885853 Msa1298170:intron 35.0%
! TTTTTCCGCACAAATTTCTG+TGG + chr8_3:58885906-58885925 None:intergenic 35.0%
CAGAAATTTGTGCGGAAAAA+TGG - chr8_3:58885906-58885925 Msa1298170:intron 35.0%
!! AGTCTACGGTGTTATAAACA+TGG + chr8_3:58886023-58886042 None:intergenic 35.0%
TATTTCCCTCCCTTAAGAAA+AGG - chr8_3:58886044-58886063 Msa1298170:CDS 35.0%
! TACTACCTTTTCTTAAGGGA+GGG + chr8_3:58886052-58886071 None:intergenic 35.0%
! GTTCCTACTACCTTTTCTTA+AGG + chr8_3:58886057-58886076 None:intergenic 35.0%
! CAACATTTTACAAAACACGC+AGG + chr8_3:58886085-58886104 None:intergenic 35.0%
GAATGAACTGGAATACAACA+AGG + chr8_3:58886112-58886131 None:intergenic 35.0%
ACAAACGCAATAGCCAAATT+CGG - chr8_3:58886177-58886196 Msa1298170:CDS 35.0%
! TTTTCAACTTCTGCCGAATT+TGG + chr8_3:58886193-58886212 None:intergenic 35.0%
CTGCTTGAAATGTGTTAACT+TGG + chr8_3:58886218-58886237 None:intergenic 35.0%
!! CAGCAAGACATTTTAGAAGT+GGG - chr8_3:58886235-58886254 Msa1298170:CDS 35.0%
!! AAGACATTTTAGAAGTGGGA+AGG - chr8_3:58886239-58886258 Msa1298170:CDS 35.0%
!! AGACATTTTAGAAGTGGGAA+GGG - chr8_3:58886240-58886259 Msa1298170:CDS 35.0%
ATTGAGTTAAAAATGGCTCG+CGG - chr8_3:58886287-58886306 Msa1298170:five_prime_UTR 35.0%
TGAACAAAACGAACGAACCA+TGG - chr8_3:58878794-58878813 Msa1298170:three_prime_UTR 40.0%
! AGGATTTGATGGGTCTGATA+GGG + chr8_3:58878902-58878921 None:intergenic 40.0%
! GGAAATGGAGTTTCTGAAAG+AGG + chr8_3:58878922-58878941 None:intergenic 40.0%
GTGACCAGAGAAATTACTAG+TGG + chr8_3:58878982-58879001 None:intergenic 40.0%
GGAGAGGTTTAGTAGAATTG+TGG - chr8_3:58879406-58879425 Msa1298170:intron 40.0%
TGGAACAGAAACAAGGTTGT+TGG - chr8_3:58879519-58879538 Msa1298170:intron 40.0%
TTTGACAACCTTGTTCGTGT+TGG - chr8_3:58879680-58879699 Msa1298170:intron 40.0%
!! ATATTCGATTCTAGGACCTG+TGG - chr8_3:58879802-58879821 Msa1298170:intron 40.0%
!! TATTCGATTCTAGGACCTGT+GGG - chr8_3:58879803-58879822 Msa1298170:intron 40.0%
CTTAGGTAGCTTCTACCTTA+TGG - chr8_3:58879991-58880010 Msa1298170:intron 40.0%
GTAGCTTCTACCTTATGGAA+TGG - chr8_3:58879996-58880015 Msa1298170:intron 40.0%
TTGTTTAGTCTCACTTGGCT+TGG - chr8_3:58880300-58880319 Msa1298170:CDS 40.0%
TAGCTTCTGCTTTAGTTAGG+TGG - chr8_3:58880326-58880345 Msa1298170:CDS 40.0%
AGCTACCAAAGCTTGATCAT+CGG + chr8_3:58880407-58880426 None:intergenic 40.0%
CCTAGGAAGTTGTATACTCT+TGG + chr8_3:58880495-58880514 None:intergenic 40.0%
! CCAAGAGTATACAACTTCCT+AGG - chr8_3:58880492-58880511 Msa1298170:intron 40.0%
! TATTTAGTGAGCACTAGCCT+AGG + chr8_3:58880512-58880531 None:intergenic 40.0%
ACAGTGGCTTCTGACTTATA+TGG - chr8_3:58880635-58880654 Msa1298170:intron 40.0%
CAATAATTTATGGCACACCG+AGG - chr8_3:58880894-58880913 Msa1298170:intron 40.0%
TACAGGTAAGAAGCTAAGTC+TGG + chr8_3:58881027-58881046 None:intergenic 40.0%
TCCATCTGTTACAGAGTTGA+TGG - chr8_3:58881083-58881102 Msa1298170:CDS 40.0%
ACCATCAACTCTGTAACAGA+TGG + chr8_3:58881087-58881106 None:intergenic 40.0%
TGCATAGTATATGCAAGGTC+TGG - chr8_3:58881319-58881338 Msa1298170:CDS 40.0%
GCATAGTATATGCAAGGTCT+GGG - chr8_3:58881320-58881339 Msa1298170:CDS 40.0%
CATAGTATATGCAAGGTCTG+GGG - chr8_3:58881321-58881340 Msa1298170:CDS 40.0%
!!! TTTTTTTTTTGTGGTGGCCG+GGG + chr8_3:58881353-58881372 None:intergenic 40.0%
!!! GTTTTTTTTTTGTGGTGGCC+GGG + chr8_3:58881354-58881373 None:intergenic 40.0%
ACATTTCCATGTTCTGCATC+AGG + chr8_3:58881428-58881447 None:intergenic 40.0%
!!! AATTTTTTTGGACTGAGGGC+AGG + chr8_3:58881704-58881723 None:intergenic 40.0%
AGCTAAGTCAATCTATCCTG+AGG - chr8_3:58881917-58881936 Msa1298170:intron 40.0%
!!! TATGGGCTCGTGATTTTTTG+AGG - chr8_3:58882017-58882036 Msa1298170:intron 40.0%
GGAAGGGTGGATAACAAATT+GGG + chr8_3:58882294-58882313 None:intergenic 40.0%
TGGAAGGGTGGATAACAAAT+TGG + chr8_3:58882295-58882314 None:intergenic 40.0%
TTTCTAATGAGGAGGGGATT+AGG - chr8_3:58882329-58882348 Msa1298170:intron 40.0%
! GAAAAAGAGTTTGAGACGGT+GGG + chr8_3:58882363-58882382 None:intergenic 40.0%
! AGAAAAAGAGTTTGAGACGG+TGG + chr8_3:58882364-58882383 None:intergenic 40.0%
GTAACTCGAGGAATGAAACA+CGG + chr8_3:58882674-58882693 None:intergenic 40.0%
GATGAATAGATCGTAACTCG+AGG + chr8_3:58882686-58882705 None:intergenic 40.0%
AGTTTCTACTTAGGACCATC+AGG + chr8_3:58882712-58882731 None:intergenic 40.0%
ATTAACATGCAAGTACCCAG+AGG + chr8_3:58882748-58882767 None:intergenic 40.0%
CTTTCTGCTTGGCAAAGAAA+TGG + chr8_3:58882778-58882797 None:intergenic 40.0%
ACGCAGAGAGTAAAAATAGG+AGG + chr8_3:58883747-58883766 None:intergenic 40.0%
CCAACGCAGAGAGTAAAAAT+AGG + chr8_3:58883750-58883769 None:intergenic 40.0%
!!! CCTATTTTTACTCTCTGCGT+TGG - chr8_3:58883747-58883766 Msa1298170:intron 40.0%
!! TTGATGATGGCAAAGCAGAA+CGG + chr8_3:58883824-58883843 None:intergenic 40.0%
ATTGAAAAGGGGAACATGGT+TGG + chr8_3:58883931-58883950 None:intergenic 40.0%
GCAAATTGAAAAGGGGAACA+TGG + chr8_3:58883935-58883954 None:intergenic 40.0%
CACTAGAGTGAAGACAGAAT+TGG - chr8_3:58884013-58884032 Msa1298170:CDS 40.0%
TAAGGTTGTGTTTGGATGGA+GGG - chr8_3:58884178-58884197 Msa1298170:intron 40.0%
! TATATTCGAGAGGGGGTTTT+TGG + chr8_3:58884377-58884396 None:intergenic 40.0%
ACCCAAAGTTTATAGATCCG+TGG - chr8_3:58884457-58884476 Msa1298170:intron 40.0%
CCCACGGATCTATAAACTTT+GGG + chr8_3:58884461-58884480 None:intergenic 40.0%
CCCAAAGTTTATAGATCCGT+GGG - chr8_3:58884458-58884477 Msa1298170:intron 40.0%
TCCCACGGATCTATAAACTT+TGG + chr8_3:58884462-58884481 None:intergenic 40.0%
ATATCAGCTTCAATCTGCTC+AGG + chr8_3:58884714-58884733 None:intergenic 40.0%
TAAGGTCAGAAACAACTCCA+TGG + chr8_3:58884902-58884921 None:intergenic 40.0%
! TCCCTCTTTTCTTGAAGTTG+AGG - chr8_3:58884958-58884977 Msa1298170:intron 40.0%
AAAGAGAATAGACACGATGG+AGG + chr8_3:58885429-58885448 None:intergenic 40.0%
TTATGCTTTGCACTGAGTAG+TGG + chr8_3:58885457-58885476 None:intergenic 40.0%
CAAACGGACCCTTTATCATT+AGG + chr8_3:58885563-58885582 None:intergenic 40.0%
CTAATGATAAAGGGTCCGTT+TGG - chr8_3:58885561-58885580 Msa1298170:intron 40.0%
AAATAAGCTCAGTCCAAACG+GGG - chr8_3:58885758-58885777 Msa1298170:intron 40.0%
!! TATCTTACTTTTGCCCCGTT+TGG + chr8_3:58885774-58885793 None:intergenic 40.0%
ATCACAAGGGACACTTAGAA+TGG - chr8_3:58885793-58885812 Msa1298170:intron 40.0%
ATGGTCACAATTGCTTGGTT+TGG - chr8_3:58885812-58885831 Msa1298170:intron 40.0%
TGGTCACAATTGCTTGGTTT+GGG - chr8_3:58885813-58885832 Msa1298170:intron 40.0%
TGTGGTCATGAATCATGATC+AGG + chr8_3:58885888-58885907 None:intergenic 40.0%
CATGACCACAGAAATTTGTG+CGG - chr8_3:58885898-58885917 Msa1298170:intron 40.0%
TTAGCAAAAACGAAGGGATC+TGG - chr8_3:58885930-58885949 Msa1298170:intron 40.0%
TAGCAAAAACGAAGGGATCT+GGG - chr8_3:58885931-58885950 Msa1298170:intron 40.0%
! CTACTACCTTTTCTTAAGGG+AGG + chr8_3:58886053-58886072 None:intergenic 40.0%
CTCCCTTAAGAAAAGGTAGT+AGG - chr8_3:58886051-58886070 Msa1298170:CDS 40.0%
!! GCAGCAAGACATTTTAGAAG+TGG - chr8_3:58886234-58886253 Msa1298170:CDS 40.0%
ACAAAACGAACGAACCATGG+AGG - chr8_3:58878797-58878816 Msa1298170:three_prime_UTR 45.0%
GAAGGTGAAAGATGCGTTTG+CGG + chr8_3:58878829-58878848 None:intergenic 45.0%
GAAGAGGGTGAAATGAGCAT+GGG + chr8_3:58878864-58878883 None:intergenic 45.0%
TGAAGAGGGTGAAATGAGCA+TGG + chr8_3:58878865-58878884 None:intergenic 45.0%
GTTAGGGTTCGTGATGAAGA+GGG + chr8_3:58878879-58878898 None:intergenic 45.0%
! GGATTTGATGGGTCTGATAG+GGG + chr8_3:58878901-58878920 None:intergenic 45.0%
! GAGGATTTGATGGGTCTGAT+AGG + chr8_3:58878903-58878922 None:intergenic 45.0%
CACATTGACCAACACGAACA+AGG + chr8_3:58879691-58879710 None:intergenic 45.0%
! CTTGTTCGTGTTGGTCAATG+TGG - chr8_3:58879689-58879708 Msa1298170:intron 45.0%
TTGTTCAGCGTCACTTGACT+TGG - chr8_3:58879883-58879902 Msa1298170:intron 45.0%
ACGCGTTGTTTAGTCTCACT+TGG - chr8_3:58880295-58880314 Msa1298170:CDS 45.0%
TTCTCCCGATGATCAAGCTT+TGG - chr8_3:58880399-58880418 Msa1298170:intron 45.0%
GCTACCAAAGCTTGATCATC+GGG + chr8_3:58880406-58880425 None:intergenic 45.0%
GTGGCTTCTGACTTATATGG+TGG - chr8_3:58880638-58880657 Msa1298170:intron 45.0%
TTTCTCAAGAGGGACTGCAT+GGG - chr8_3:58880990-58881009 Msa1298170:intron 45.0%
TAAGAAGCTAAGTCTGGTGG+AGG + chr8_3:58881021-58881040 None:intergenic 45.0%
AGGTAAGAAGCTAAGTCTGG+TGG + chr8_3:58881024-58881043 None:intergenic 45.0%
AAACTCCACCGGAACAACAA+AGG - chr8_3:58881164-58881183 Msa1298170:intron 45.0%
!! ACTAACCTTTGTTGTTCCGG+TGG + chr8_3:58881172-58881191 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr8_3:58881292-58881311 Msa1298170:CDS 45.0%
!! TTTTTAGTGGAGTGGGGCAT+AGG - chr8_3:58881471-58881490 Msa1298170:intron 45.0%
ACTGAGGGCAGGATATAAAC+AGG + chr8_3:58881693-58881712 None:intergenic 45.0%
CCAATGATGTCTTCCTCATG+CGG - chr8_3:58881949-58881968 Msa1298170:intron 45.0%
! GATGACATCGGCCTTTTATG+AGG + chr8_3:58882119-58882138 None:intergenic 45.0%
GATAACAAATTGGGCCTGCT+TGG + chr8_3:58882285-58882304 None:intergenic 45.0%
GATCTATTCATCCCTCCTGA+TGG - chr8_3:58882694-58882713 Msa1298170:intron 45.0%
TCTACTTAGGACCATCAGGA+GGG + chr8_3:58882708-58882727 None:intergenic 45.0%
TTCTACTTAGGACCATCAGG+AGG + chr8_3:58882709-58882728 None:intergenic 45.0%
ACTTGATCTCTTGTTGCCTC+TGG - chr8_3:58882729-58882748 Msa1298170:intron 45.0%
CTTGATCTCTTGTTGCCTCT+GGG - chr8_3:58882730-58882749 Msa1298170:intron 45.0%
CTTGTTTCCTTCTTTCAGGG+AGG - chr8_3:58882876-58882895 Msa1298170:intron 45.0%
TTTCAGGGAGGTGAGAAGTT+GGG - chr8_3:58882888-58882907 Msa1298170:intron 45.0%
TCCACCAAGTAACATGTCTG+CGG + chr8_3:58883424-58883443 None:intergenic 45.0%
! TATGCCTCTTCTTTGGAGGT+GGG + chr8_3:58883626-58883645 None:intergenic 45.0%
! ATATGCCTCTTCTTTGGAGG+TGG + chr8_3:58883627-58883646 None:intergenic 45.0%
TCAATTTGCAGCCTATTGCG+CGG - chr8_3:58883946-58883965 Msa1298170:CDS 45.0%
GTAAGGTTGTGTTTGGATGG+AGG - chr8_3:58884177-58884196 Msa1298170:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG - chr8_3:58884184-58884203 Msa1298170:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG - chr8_3:58884188-58884207 Msa1298170:intron 45.0%
AACTTTGGGTCTGTTCGAGA+GGG + chr8_3:58884447-58884466 None:intergenic 45.0%
AAACTTTGGGTCTGTTCGAG+AGG + chr8_3:58884448-58884467 None:intergenic 45.0%
CCATACTCAACAGCTTCACT+TGG + chr8_3:58884759-58884778 None:intergenic 45.0%
CCAAGTGAAGCTGTTGAGTA+TGG - chr8_3:58884756-58884775 Msa1298170:intron 45.0%
! TGCAGGTGTTGTACAATGAG+AGG - chr8_3:58884865-58884884 Msa1298170:intron 45.0%
! GCAGGTGTTGTACAATGAGA+GGG - chr8_3:58884866-58884885 Msa1298170:intron 45.0%
! CAGGTGTTGTACAATGAGAG+GGG - chr8_3:58884867-58884886 Msa1298170:intron 45.0%
! AGAGGGATTTAACTTCCCAG+CGG + chr8_3:58884945-58884964 None:intergenic 45.0%
AATAGACACGATGGAGGTCA+TGG + chr8_3:58885423-58885442 None:intergenic 45.0%
! GCAAACACCTGTCCTTTTCA+TGG - chr8_3:58885504-58885523 Msa1298170:intron 45.0%
CTTATGGCCATGAAAAGGAC+AGG + chr8_3:58885514-58885533 None:intergenic 45.0%
!! ATTGCTTGGTTTGGGCTGTT+TGG - chr8_3:58885821-58885840 Msa1298170:intron 45.0%
AGCAAAAACGAAGGGATCTG+GGG - chr8_3:58885932-58885951 Msa1298170:intron 45.0%
AAGTGTACAAGTGCTTGGCA+CGG + chr8_3:58885980-58885999 None:intergenic 45.0%
AGGGAGGGAAATACAGTCTA+CGG + chr8_3:58886037-58886056 None:intergenic 45.0%
!!! AAAAAAAAACATTTTTTTTA+TGG - chr8_3:58881364-58881383 Msa1298170:intron 5.0%
GGTTAGGGTTCGTGATGAAG+AGG + chr8_3:58878880-58878899 None:intergenic 50.0%
GATGGGTCTGATAGGGGTTA+GGG + chr8_3:58878895-58878914 None:intergenic 50.0%
! TGATGGGTCTGATAGGGGTT+AGG + chr8_3:58878896-58878915 None:intergenic 50.0%
AGCGACGAAATCGGTGGAAA+TGG + chr8_3:58878937-58878956 None:intergenic 50.0%
! GAACTACTGATTGCCGTGGA+AGG + chr8_3:58878960-58878979 None:intergenic 50.0%
! AGTGGAACTACTGATTGCCG+TGG + chr8_3:58878964-58878983 None:intergenic 50.0%
! TTTGAAACGTCGCGGGATTG+AGG + chr8_3:58879022-58879041 None:intergenic 50.0%
! AACGACTCCTCTTTTACCGC+CGG + chr8_3:58879048-58879067 None:intergenic 50.0%
!! ATTCTAGGACCTGTGGGTTG+TGG - chr8_3:58879809-58879828 Msa1298170:intron 50.0%
!! TTCTAGGACCTGTGGGTTGT+GGG - chr8_3:58879810-58879829 Msa1298170:intron 50.0%
GACGCTGAACAACGCAAAGT+CGG + chr8_3:58879875-58879894 None:intergenic 50.0%
CATGCAGTCCCTCTTGAGAA+AGG + chr8_3:58880991-58881010 None:intergenic 50.0%
CTTTCTCAAGAGGGACTGCA+TGG - chr8_3:58880989-58881008 Msa1298170:intron 50.0%
GAACTGCCTGATGCAGAACA+TGG - chr8_3:58881419-58881438 Msa1298170:intron 50.0%
!! TCATTGGCTCGTAGTACCTC+AGG + chr8_3:58881936-58881955 None:intergenic 50.0%
CCGCATGAGGAAGACATCAT+TGG + chr8_3:58881952-58881971 None:intergenic 50.0%
TAAGATTGTGCGTCCGCATG+AGG + chr8_3:58881965-58881984 None:intergenic 50.0%
CATGCGGACGCACAATCTTA+CGG - chr8_3:58881965-58881984 Msa1298170:intron 50.0%
TATGCAGCGCAGCACAATGT+GGG + chr8_3:58881999-58882018 None:intergenic 50.0%
ATATGCAGCGCAGCACAATG+TGG + chr8_3:58882000-58882019 None:intergenic 50.0%
ACATTGTGCTGCGCTGCATA+TGG - chr8_3:58881999-58882018 Msa1298170:intron 50.0%
CATTGTGCTGCGCTGCATAT+GGG - chr8_3:58882000-58882019 Msa1298170:intron 50.0%
AAACGACGACGCATCACAGT+AGG + chr8_3:58882156-58882175 None:intergenic 50.0%
AAATGTCCACACGCCACTGT+CGG + chr8_3:58882210-58882229 None:intergenic 50.0%
CTGCTTGGTTCAGTTGGAAG+GGG + chr8_3:58882270-58882289 None:intergenic 50.0%
CCTGCTTGGTTCAGTTGGAA+GGG + chr8_3:58882271-58882290 None:intergenic 50.0%
! GTTTGAGACGGTGGGTCAAA+AGG + chr8_3:58882355-58882374 None:intergenic 50.0%
CTTCTCACCTCCCTGAAAGA+AGG + chr8_3:58882886-58882905 None:intergenic 50.0%
CTTTCAGGGAGGTGAGAAGT+TGG - chr8_3:58882887-58882906 Msa1298170:intron 50.0%
TGTGCCGCAGACATGTTACT+TGG - chr8_3:58883417-58883436 Msa1298170:intron 50.0%
! ATGCCTCTTCTTTGGAGGTG+GGG + chr8_3:58883625-58883644 None:intergenic 50.0%
! TCTCTGCGTTGGCAATGCTT+GGG - chr8_3:58883758-58883777 Msa1298170:intron 50.0%
TGCACCAGCAGCCAAAAGTA+AGG + chr8_3:58883793-58883812 None:intergenic 50.0%
!! ACTTTTGGCTGCTGGTGCAA+AGG - chr8_3:58883794-58883813 Msa1298170:intron 50.0%
!! CTTTTGGCTGCTGGTGCAAA+GGG - chr8_3:58883795-58883814 Msa1298170:intron 50.0%
! AGGGGAACATGGTTGGTGTT+TGG + chr8_3:58883924-58883943 None:intergenic 50.0%
TGACCTTGAAACCGCGCAAT+AGG + chr8_3:58883960-58883979 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG - chr8_3:58884187-58884206 Msa1298170:intron 50.0%
! TTGGAGGGTAGGGTTTTGCA+GGG + chr8_3:58884358-58884377 None:intergenic 50.0%
! TTTGGAGGGTAGGGTTTTGC+AGG + chr8_3:58884359-58884378 None:intergenic 50.0%
!! TTCGAGAGGGGGTTTTTGGA+GGG + chr8_3:58884373-58884392 None:intergenic 50.0%
!! ATTCGAGAGGGGGTTTTTGG+AGG + chr8_3:58884374-58884393 None:intergenic 50.0%
! TTCGAGAGGGAGTTTCTGGA+GGG + chr8_3:58884434-58884453 None:intergenic 50.0%
TCTGTTCGAGAGGGAGTTTC+TGG + chr8_3:58884438-58884457 None:intergenic 50.0%
GTACAATGAGAGGGGCTCTA+AGG - chr8_3:58884875-58884894 Msa1298170:intron 50.0%
GCACAGCTTATTTGACCGCT+GGG - chr8_3:58884927-58884946 Msa1298170:intron 50.0%
TCATGGATGTCACTCGCAGT+AGG + chr8_3:58885406-58885425 None:intergenic 50.0%
GCAAAAACGAAGGGATCTGG+GGG - chr8_3:58885933-58885952 Msa1298170:intron 50.0%
GAAGGGACATAGACTCACTC+TGG - chr8_3:58886257-58886276 Msa1298170:exon 50.0%
GAGTTAAAAATGGCTCGCGG+AGG - chr8_3:58886290-58886309 Msa1298170:five_prime_UTR 50.0%
GTTTGCGGTTGCAACCTCCA+TGG + chr8_3:58878814-58878833 None:intergenic 55.0%
CGTGGAAGGAGCGACGAAAT+CGG + chr8_3:58878946-58878965 None:intergenic 55.0%
CGATTTCGTCGCTCCTTCCA+CGG - chr8_3:58878944-58878963 Msa1298170:three_prime_UTR 55.0%
CAAAGCTCCGGCGGTAAAAG+AGG - chr8_3:58879038-58879057 Msa1298170:three_prime_UTR 55.0%
! TCTAGGACCTGTGGGTTGTG+GGG - chr8_3:58879811-58879830 Msa1298170:intron 55.0%
!!! TGGGGACGGCCCACTTTTTA+GGG - chr8_3:58879829-58879848 Msa1298170:intron 55.0%
CCAACTGAGCTAAGCTCACC+AGG + chr8_3:58881290-58881309 None:intergenic 55.0%
CCTGGTGAGCTTAGCTCAGT+TGG - chr8_3:58881287-58881306 Msa1298170:CDS 55.0%
! AAGGTCTGGGGTTCAAACCC+CGG - chr8_3:58881333-58881352 Msa1298170:intron 55.0%
CGCAGCACAATGTGGGATCA+TGG + chr8_3:58881992-58882011 None:intergenic 55.0%
GCGCAAGGAGGAGATGACAT+CGG + chr8_3:58882131-58882150 None:intergenic 55.0%
TCTCTCTGTGCATCCGACAG+TGG - chr8_3:58882194-58882213 Msa1298170:intron 55.0%
CCCTTCCAACTGAACCAAGC+AGG - chr8_3:58882268-58882287 Msa1298170:intron 55.0%
GCCTGCTTGGTTCAGTTGGA+AGG + chr8_3:58882272-58882291 None:intergenic 55.0%
TTGGGCCTGCTTGGTTCAGT+TGG + chr8_3:58882276-58882295 None:intergenic 55.0%
TAACATGTCTGCGGCACAGC+AGG + chr8_3:58883415-58883434 None:intergenic 55.0%
! GCCGCAGACATGTTACTTGG+TGG - chr8_3:58883420-58883439 Msa1298170:intron 55.0%
AGGTGGGGTTGTGCAGTGAT+GGG + chr8_3:58883610-58883629 None:intergenic 55.0%
CAACCCCACCTCCAAAGAAG+AGG - chr8_3:58883619-58883638 Msa1298170:intron 55.0%
TGCAGGGACTTCTGCACGTT+GGG + chr8_3:58883671-58883690 None:intergenic 55.0%
! CTCTCTGCGTTGGCAATGCT+TGG - chr8_3:58883757-58883776 Msa1298170:intron 55.0%
! CTCTGCGTTGGCAATGCTTG+GGG - chr8_3:58883759-58883778 Msa1298170:intron 55.0%
! GGGAGAGGCAGCCTTACTTT+TGG - chr8_3:58883779-58883798 Msa1298170:intron 55.0%
!! GCAGCCTTACTTTTGGCTGC+TGG - chr8_3:58883786-58883805 Msa1298170:intron 55.0%
CAGCCTATTGCGCGGTTTCA+AGG - chr8_3:58883954-58883973 Msa1298170:CDS 55.0%
ATGGAGGGTTTAGGAGGGCA+GGG - chr8_3:58884193-58884212 Msa1298170:intron 55.0%
!! GAGGGGGTTTTTGGAGGGTA+GGG + chr8_3:58884368-58884387 None:intergenic 55.0%
!! AGAGGGGGTTTTTGGAGGGT+AGG + chr8_3:58884369-58884388 None:intergenic 55.0%
! TCGAGAGGGAGTTTCTGGAG+GGG + chr8_3:58884433-58884452 None:intergenic 55.0%
! GTTCGAGAGGGAGTTTCTGG+AGG + chr8_3:58884435-58884454 None:intergenic 55.0%
GGCACAGCTTATTTGACCGC+TGG - chr8_3:58884926-58884945 Msa1298170:intron 55.0%
GGAAGGAGCGACGAAATCGG+TGG + chr8_3:58878943-58878962 None:intergenic 60.0%
AACGTCGCGGGATTGAGGCA+CGG + chr8_3:58879017-58879036 None:intergenic 60.0%
!! CCGGAGCTTTGAAACGTCGC+GGG + chr8_3:58879029-58879048 None:intergenic 60.0%
CCCGCGACGTTTCAAAGCTC+CGG - chr8_3:58879026-58879045 Msa1298170:three_prime_UTR 60.0%
!! GCCGGAGCTTTGAAACGTCG+CGG + chr8_3:58879030-58879049 None:intergenic 60.0%
GCGACGTTTCAAAGCTCCGG+CGG - chr8_3:58879029-58879048 Msa1298170:three_prime_UTR 60.0%
!!! GTGGGGACGGCCCACTTTTT+AGG - chr8_3:58879828-58879847 Msa1298170:intron 60.0%
! TCACAGTAGGAGGCGCAAGG+AGG + chr8_3:58882143-58882162 None:intergenic 60.0%
! GCATCACAGTAGGAGGCGCA+AGG + chr8_3:58882146-58882165 None:intergenic 60.0%
CGACGACGCATCACAGTAGG+AGG + chr8_3:58882153-58882172 None:intergenic 60.0%
GAGGTGGGGTTGTGCAGTGA+TGG + chr8_3:58883611-58883630 None:intergenic 60.0%
CTGCAGGGACTTCTGCACGT+TGG + chr8_3:58883672-58883691 None:intergenic 60.0%
CGTTGGCAATGCTTGGGGAG+AGG - chr8_3:58883764-58883783 Msa1298170:intron 60.0%
GATGGAGGGTTTAGGAGGGC+AGG - chr8_3:58884192-58884211 Msa1298170:intron 60.0%
! GGGTAGGGTTTTGCAGGGCT+AGG + chr8_3:58884353-58884372 None:intergenic 60.0%
CTGGAGGGGAGGGTTTCGAA+GGG + chr8_3:58884419-58884438 None:intergenic 60.0%
TCTGGAGGGGAGGGTTTCGA+AGG + chr8_3:58884420-58884439 None:intergenic 60.0%
! GAGGGAGTTTCTGGAGGGGA+GGG + chr8_3:58884429-58884448 None:intergenic 60.0%
! AGAGGGAGTTTCTGGAGGGG+AGG + chr8_3:58884430-58884449 None:intergenic 60.0%
!! GAGAGGGGCTCTAAGGACCA+TGG - chr8_3:58884882-58884901 Msa1298170:intron 60.0%
CGGGATTGAGGCACGGAGGA+CGG + chr8_3:58879010-58879029 None:intergenic 65.0%
! GGACCTGTGGGTTGTGGGGA+CGG - chr8_3:58879815-58879834 Msa1298170:intron 65.0%
CGATCGCGCATGCGCGAAGA+AGG - chr8_3:58882050-58882069 Msa1298170:intron 65.0%
GTGCATCCGACAGTGGCGTG+TGG - chr8_3:58882201-58882220 Msa1298170:intron 65.0%
CGGCACAGCAGGACTGTGAC+AGG + chr8_3:58883404-58883423 None:intergenic 65.0%
GTCGCGGGATTGAGGCACGG+AGG + chr8_3:58879014-58879033 None:intergenic 70.0%
GGGCCGTCCCCACAACCCAC+AGG + chr8_3:58879821-58879840 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 58878729 58886351 58878729 ID=Msa1298170;Name=Msa1298170
chr8_3 mRNA 58878729 58886351 58878729 ID=Msa1298170-mRNA-1;Parent=Msa1298170;Name=Msa1298170-mRNA-1;_AED=0.08;_eAED=0.08;_QI=84|1|1|1|0.85|0.75|8|481|303
chr8_3 exon 58878729 58879171 58878729 ID=Msa1298170-mRNA-1:exon:16928;Parent=Msa1298170-mRNA-1
chr8_3 exon 58880101 58880210 58880101 ID=Msa1298170-mRNA-1:exon:16927;Parent=Msa1298170-mRNA-1
chr8_3 exon 58880289 58880402 58880289 ID=Msa1298170-mRNA-1:exon:16926;Parent=Msa1298170-mRNA-1
chr8_3 exon 58881046 58881123 58881046 ID=Msa1298170-mRNA-1:exon:16925;Parent=Msa1298170-mRNA-1
chr8_3 exon 58881220 58881346 58881220 ID=Msa1298170-mRNA-1:exon:16924;Parent=Msa1298170-mRNA-1
chr8_3 exon 58882131 58882186 58882131 ID=Msa1298170-mRNA-1:exon:16923;Parent=Msa1298170-mRNA-1
chr8_3 exon 58883895 58884098 58883895 ID=Msa1298170-mRNA-1:exon:16922;Parent=Msa1298170-mRNA-1
chr8_3 exon 58886007 58886351 58886007 ID=Msa1298170-mRNA-1:exon:16921;Parent=Msa1298170-mRNA-1
chr8_3 five_prime_UTR 58886268 58886351 58886268 ID=Msa1298170-mRNA-1:five_prime_utr;Parent=Msa1298170-mRNA-1
chr8_3 CDS 58886007 58886267 58886007 ID=Msa1298170-mRNA-1:cds;Parent=Msa1298170-mRNA-1
chr8_3 CDS 58883895 58884098 58883895 ID=Msa1298170-mRNA-1:cds;Parent=Msa1298170-mRNA-1
chr8_3 CDS 58882131 58882186 58882131 ID=Msa1298170-mRNA-1:cds;Parent=Msa1298170-mRNA-1
chr8_3 CDS 58881220 58881346 58881220 ID=Msa1298170-mRNA-1:cds;Parent=Msa1298170-mRNA-1
chr8_3 CDS 58881046 58881123 58881046 ID=Msa1298170-mRNA-1:cds;Parent=Msa1298170-mRNA-1
chr8_3 CDS 58880289 58880402 58880289 ID=Msa1298170-mRNA-1:cds;Parent=Msa1298170-mRNA-1
chr8_3 CDS 58880139 58880210 58880139 ID=Msa1298170-mRNA-1:cds;Parent=Msa1298170-mRNA-1
chr8_3 three_prime_UTR 58880101 58880138 58880101 ID=Msa1298170-mRNA-1:three_prime_utr;Parent=Msa1298170-mRNA-1
chr8_3 three_prime_UTR 58878729 58879171 58878729 ID=Msa1298170-mRNA-1:three_prime_utr;Parent=Msa1298170-mRNA-1
Gene Sequence

>Msa1298170

ATGGAGGTTGCAACCGCAAACGCATCTTTCACCTTCTTATCAAACAAACCCATGCTCATTTCACCCTCTTCATCACGAACCCTAACCCCTATCAGACCCATCAAATCCTCTTTCAGAAACTCCATTTCCACCGATTTCGTCGCTCCTTCCACGGCAATCAGTAGTTCCACTAGTAATTTCTCTGGTCACAAGCTCCGTCCTCCGTGCCTCAATCCCGCGACGTTTCAAAGCTCCGGCGGTAAAAGAGGAGTCGTTACTATGGTTATTCCTTTCTCAAGAGGGACTGCATGGGAGCAACCTCCACCAGACTTAGCTTCTTACCTGTACAAAAATCGAATTGTTTACTTGGGCATGTCTCTCGTTCCATCTGTTACAGAGTTGATGGTTGCTGAATTTCTTTACCTTCAATATGACGATGAAACAAAACCCATTTATCTGTACATAAACTCCACCGGAACAACAAAGGGAGGTGAGAAGTTGGGTTATGAGACTGAAGCACTTGCAGTTTATGATTTGATGAGGTACATCAAGCCTCCTATTTTTACTCTCTGCGTTGGCAATGCTTGGGGAGAGGCAGCCTTACTTTTGGCTGCTGGTGCAAAGGGTAACCGTTCTGCTTTGCCATCATCAACTATAATGATAAGACAGCCTATTGCGCGGTTTCAAGGTCAAGCAACAGACGTCAACCTTGCAAGAAAAGAAATCACTAGAGTGAAGACAGAATTGGTTAATTTGTTAGCAAAGCACACTGAAAAAACACCTGAGCAGATTGAAGCTGATATTCGGCGCCCAAAGTATTTTAGTCCAAGTGAAGCTGTTGAGTATGGAATCATAGACAAGGTGTTGTACAATGAGAGGGGCTCTAAGGACCATGGAGTTGTTTCTGACCTTAAAAAGGCACAGCTTATTTGA

Protein sequence

>Msa1298170

MEVATANASFTFLSNKPMLISPSSSRTLTPIRPIKSSFRNSISTDFVAPSTAISSSTSNFSGHKLRPPCLNPATFQSSGGKRGVVTMVIPFSRGTAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELMVAEFLYLQYDDETKPIYLYINSTGTTKGGEKLGYETEALAVYDLMRYIKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARKEITRVKTELVNLLAKHTEKTPEQIEADIRRPKYFSPSEAVEYGIIDKVLYNERGSKDHGVVSDLKKAQLI*