AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0267320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0267320 MtrunA17_Chr5g0399001 96.923 455 14 0 1 455 17 471 0.0 921
Msa0267320 MtrunA17_Chr8g0352461 53.440 436 187 5 17 446 4 429 2.08e-164 470
Msa0267320 MtrunA17_Chr8g0352481 53.302 424 190 4 17 440 4 419 4.79e-161 461
Msa0267320 MtrunA17_Chr3g0091441 47.912 455 212 9 5 446 1 443 9.76e-148 429
Msa0267320 MtrunA17_Chr2g0304651 23.622 254 134 9 15 235 3 229 6.28e-13 70.9
Msa0267320 MtrunA17_Chr2g0305211 23.695 249 126 9 15 228 3 222 6.36e-13 70.9
Msa0267320 MtrunA17_Chr2g0305231 23.695 249 126 9 15 228 3 222 6.36e-13 70.9
Msa0267320 MtrunA17_Chr7g0268611 26.087 230 132 7 17 240 8 205 9.77e-13 69.7
Msa0267320 MtrunA17_Chr7g0268621 23.132 281 179 6 17 295 6 251 1.06e-12 69.3
Msa0267320 MtrunA17_Chr7g0262591 24.034 233 135 6 18 241 25 224 1.96e-12 68.9
Msa0267320 MtrunA17_Chr2g0304721 23.438 256 132 9 15 235 3 229 2.47e-12 68.9
Msa0267320 MtrunA17_Chr1g0182991 24.554 224 138 6 19 240 27 221 4.47e-12 67.8
Msa0267320 MtrunA17_Chr3g0139441 24.898 245 150 7 19 257 41 257 8.78e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0267320 AT1G62620.1 61.726 452 162 5 10 454 3 450 0.0 582
Msa0267320 AT1G63370.1 61.504 452 163 5 10 454 3 450 0.0 582
Msa0267320 AT1G62600.1 62.281 456 161 6 4 453 1 451 0.0 571
Msa0267320 AT1G12200.1 60.526 456 169 6 5 453 1 452 0.0 547
Msa0267320 AT1G62560.1 55.408 453 196 3 5 455 1 449 0.0 528
Msa0267320 AT1G12140.1 58.499 453 181 3 5 455 1 448 0.0 528
Msa0267320 AT1G12140.3 58.499 453 181 3 5 455 1 448 0.0 528
Msa0267320 AT1G62580.2 60.044 453 174 6 4 453 1 449 0.0 526
Msa0267320 AT1G62620.2 64.767 386 129 4 10 388 3 388 0.0 523
Msa0267320 AT1G12140.2 58.057 453 181 4 5 455 1 446 0.0 519
Msa0267320 AT1G65860.1 54.846 454 197 5 4 455 1 448 0.0 515
Msa0267320 AT1G62600.2 64.706 391 131 5 4 388 1 390 6.29e-179 506
Msa0267320 AT1G62540.1 56.167 454 191 5 4 455 1 448 2.90e-178 506
Msa0267320 AT1G12160.1 53.289 456 193 4 15 454 10 461 5.23e-177 504
Msa0267320 AT1G62580.1 55.967 486 174 8 4 453 1 482 7.45e-177 504
Msa0267320 AT1G62570.1 56.167 454 191 5 4 455 1 448 7.64e-176 501
Msa0267320 AT1G62540.2 53.445 479 190 6 4 455 1 473 4.90e-174 497
Msa0267320 AT1G62560.2 59.067 386 156 2 5 388 1 386 4.44e-170 483
Msa0267320 AT1G12130.1 53.219 466 185 8 12 454 8 463 3.57e-166 476
Msa0267320 AT1G62540.3 53.304 454 186 7 4 455 1 430 7.85e-164 469
Msa0267320 AT1G63340.1 53.863 453 162 5 4 453 1 409 1.47e-162 466
Msa0267320 AT1G63370.2 63.664 333 114 4 10 335 3 335 3.99e-155 443
Msa0267320 AT5G61290.1 48.758 443 207 8 15 446 14 447 1.44e-149 434
Msa0267320 AT5G07800.1 47.137 454 218 10 15 454 14 459 2.82e-145 423
Msa0267320 AT1G12200.2 64.095 337 113 5 5 334 1 336 7.40e-144 416
Msa0267320 AT1G62580.3 61.449 345 117 5 4 333 1 344 2.96e-133 388
Msa0267320 AT1G63390.1 57.407 162 63 4 4 160 1 161 2.68e-48 163
Msa0267320 AT5G45180.1 23.810 441 214 18 13 363 9 417 3.60e-15 77.8
Msa0267320 AT1G19250.1 28.340 247 121 10 12 228 8 228 6.20e-14 74.3
Msa0267320 AT5G11320.2 23.214 224 136 5 19 240 19 208 3.10e-12 68.2
Msa0267320 AT5G11320.1 23.214 224 136 5 19 240 19 208 5.64e-12 67.8
Msa0267320 AT4G28720.1 24.561 228 138 6 18 240 26 224 4.65e-11 65.1

Find 153 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTGGCGTGAACGATTT+TGG 0.199053 2_2:+68876178 None:intergenic
TTTGCTGGGGTGGGTGAAGG+TGG 0.205048 2_2:-68875740 Msa0267320:CDS
CAATTTGCCTCGGGAGAGTA+TGG 0.242875 2_2:-68875912 Msa0267320:CDS
TAAGAGGCACACTCATAATA+TGG 0.255894 2_2:-68873515 Msa0267320:CDS
AAGAAAATAACCAGGAATAT+TGG 0.264046 2_2:+68875616 None:intergenic
CTCCATGGCTTTCCTTTGTT+GGG 0.291150 2_2:-68873690 Msa0267320:CDS
AAGACAGAGGTGGTGTTTGC+TGG 0.296073 2_2:-68875755 Msa0267320:CDS
ATATTATGAGTGTGCCTCTT+AGG 0.298315 2_2:+68873517 None:intergenic
TAACATGTGGCTTCATTCTA+TGG 0.307413 2_2:-68874300 Msa0267320:intron
TGCAGTGGGACTACAATAAC+TGG 0.310122 2_2:-68872425 Msa0267320:intron
GTGTTTGCTGGGGTGGGTGA+AGG 0.313072 2_2:-68875743 Msa0267320:CDS
CACGGGCTCGGCCAATGTTC+AGG 0.313423 2_2:-68873491 Msa0267320:intron
CATACTCTCCCGAGGCAAAT+TGG 0.320024 2_2:+68875913 None:intergenic
GGGTAGGTTGTAGTTCTAAT+AGG 0.325138 2_2:-68874437 Msa0267320:intron
GCTCGGGTGTTCTGTAATTA+TGG 0.325418 2_2:+68874768 None:intergenic
AGAAAATAACCAGGAATATT+GGG 0.332604 2_2:+68875617 None:intergenic
GCTCCATGGCTTTCCTTTGT+TGG 0.336615 2_2:-68873691 Msa0267320:CDS
GAATGTAAATTATATATGTT+TGG 0.343768 2_2:-68872133 Msa0267320:three_prime_UTR
CCGAGACTTCCCAATATTCC+TGG 0.353788 2_2:-68875626 Msa0267320:intron
AGTGGATAAGCTTCCGGTTC+GGG 0.354622 2_2:+68875960 None:intergenic
ATCATGTTCATTCATGTGAT+AGG 0.359899 2_2:+68876274 None:intergenic
GGGTGGGTGAAGGTGGGAAA+TGG 0.367744 2_2:-68875733 Msa0267320:CDS
GCCGATGACTGCCACGTGGC+GGG 0.373968 2_2:+68876120 None:intergenic
TGGCTATGCATTTGCTTCCC+TGG 0.375441 2_2:+68874788 None:intergenic
AGAGGTGGTGTTTGCTGGGG+TGG 0.381682 2_2:-68875750 Msa0267320:CDS
CTTTGTTGGGTTACCTTGGA+AGG 0.382913 2_2:-68873677 Msa0267320:CDS
ATGGAGAACGCAAATGTATA+TGG 0.387354 2_2:-68872367 Msa0267320:CDS
TGCTACTAAGCCTCCGGCGC+CGG 0.388838 2_2:+68876096 None:intergenic
TGGTTCGGAGTGAATTGTAT+AGG 0.394896 2_2:+68875933 None:intergenic
TACTTGTCACTTGAAGAATC+TGG 0.396469 2_2:-68873544 Msa0267320:CDS
TACTTGATCTTGAAAGGGCT+CGG 0.401139 2_2:+68874751 None:intergenic
AGAAAGGGAGAGATTGTAGA+AGG 0.404469 2_2:-68875856 Msa0267320:CDS
CACTCGGTTTGGACCCGAAC+CGG 0.410482 2_2:-68875973 Msa0267320:CDS
CTTCGAGCGAGGAGAAGAAT+TGG 0.410605 2_2:-68876035 Msa0267320:CDS
GGCTCGAGTGGATAAGCTTC+CGG 0.414887 2_2:+68875954 None:intergenic
GAGGTGGTGTTTGCTGGGGT+GGG 0.423874 2_2:-68875749 Msa0267320:CDS
CTGCAGAGCAAGTGGATAGC+TGG 0.424635 2_2:-68873631 Msa0267320:CDS
GAGTGGATAAGCTTCCGGTT+CGG 0.425312 2_2:+68875959 None:intergenic
AGTGGGTCGGATTCTATCTC+TGG 0.428807 2_2:+68875992 None:intergenic
TTAATAAATGGAAGAATCAA+TGG 0.432279 2_2:+68876206 None:intergenic
GCAGTCATCGGCGCCGGCGC+CGG 0.432692 2_2:-68876109 Msa0267320:CDS
GAGAAGAATTGGGCGGTTCA+TGG 0.435788 2_2:-68876024 Msa0267320:CDS
TTCTTCTAAAAGGGTAATCT+CGG 0.436563 2_2:+68875885 None:intergenic
TCACCACACCATTGGTTTCA+AGG 0.437617 2_2:+68873770 None:intergenic
AGAATCCGACCCACTCGGTT+TGG 0.439148 2_2:-68875984 Msa0267320:CDS
CACGTGGCAGTCATCGGCGC+CGG 0.444457 2_2:-68876115 Msa0267320:CDS
ATCACTTACTTGATCTTGAA+AGG 0.452689 2_2:+68874745 None:intergenic
TTTAGAAGAAAAGAAGAGAA+AGG 0.454059 2_2:-68875872 Msa0267320:CDS
TTGCTGGGGTGGGTGAAGGT+GGG 0.455177 2_2:-68875739 Msa0267320:CDS
TTCCACCGGCGTTAGCTCCA+TGG 0.457976 2_2:-68873705 Msa0267320:CDS
TGTGAGAAGTGGTGTTGCGG+TGG 0.462747 2_2:+68876144 None:intergenic
TCAGGCATTAATGCATGGCC+AGG 0.465216 2_2:-68874806 Msa0267320:intron
TTTCCTTTGTTGGGTTACCT+TGG 0.473219 2_2:-68873681 Msa0267320:CDS
TTAGAAGAAAAGAAGAGAAA+GGG 0.478877 2_2:-68875871 Msa0267320:CDS
TGCTCTGCAGTTCAAACAAA+GGG 0.480096 2_2:+68873644 None:intergenic
AGACAGAGGTGGTGTTTGCT+GGG 0.480683 2_2:-68875754 Msa0267320:CDS
GTTCTCCATTCTTCCATAGC+AGG 0.489761 2_2:+68872381 None:intergenic
GTCATCGGCGCCGGCGCCGG+AGG 0.490906 2_2:-68876106 Msa0267320:CDS
CACTCCGAACCAATTTGCCT+CGG 0.495195 2_2:-68875922 Msa0267320:CDS
CACTCGTCACGATAAGTCTC+AGG 0.501205 2_2:+68872318 None:intergenic
GTGGGCATGATGAATTTCAT+TGG 0.502202 2_2:+68876163 None:intergenic
GACTTCATTGTACATTGCAC+AGG 0.505864 2_2:-68874103 Msa0267320:CDS
TCATAATATGGGCACGGGCT+CGG 0.507929 2_2:-68873503 Msa0267320:CDS
TTTCCTTTCCTTGAAACCAA+TGG 0.508177 2_2:-68873778 Msa0267320:CDS
TCAGTGCGGTGTTCCTGCTA+TGG 0.508464 2_2:-68872394 Msa0267320:CDS
GCGTGCTGCTACTAAGCCTC+CGG 0.510739 2_2:+68876090 None:intergenic
ATATGGCTACATCTAAGAAC+AGG 0.511352 2_2:-68872350 Msa0267320:CDS
ACTTGATCTTGAAAGGGCTC+GGG 0.512775 2_2:+68874752 None:intergenic
AGAAGAATTGGGCGGTTCAT+GGG 0.513280 2_2:-68876023 Msa0267320:CDS
GTGAGAAGTGGTGTTGCGGT+GGG 0.518569 2_2:+68876145 None:intergenic
TCACTTACTTGATCTTGAAA+GGG 0.518929 2_2:+68874746 None:intergenic
TTGAGATTGGTGATTTGGTG+AGG 0.519792 2_2:-68875781 Msa0267320:CDS
TTCGAGCGAGGAGAAGAATT+GGG 0.519829 2_2:-68876034 Msa0267320:CDS
TCTCCCGAGGCAAATTGGTT+CGG 0.520142 2_2:+68875918 None:intergenic
AGCCACATGTTATCATGGCC+AGG 0.523909 2_2:+68874311 None:intergenic
CCCCGCCACGTGGCAGTCAT+CGG 0.524579 2_2:-68876121 Msa0267320:CDS
AATGAAGCCACATGTTATCA+TGG 0.526082 2_2:+68874306 None:intergenic
ACTCCGAACCAATTTGCCTC+GGG 0.526203 2_2:-68875921 Msa0267320:CDS
AAGAGGCACACTCATAATAT+GGG 0.527124 2_2:-68873514 Msa0267320:CDS
GGGAAAGGAGCAACCTTCCA+AGG 0.527136 2_2:+68873664 None:intergenic
TCATGTTCATTCATGTGATA+GGG 0.529036 2_2:+68876275 None:intergenic
ATCTACGGTCACCACACCAT+TGG 0.533574 2_2:+68873762 None:intergenic
TCTGTTGAAGAAGATAAGCT+TGG 0.538010 2_2:-68874341 Msa0267320:CDS
CATTGCCCTTCCTTCAGAAG+AGG 0.538791 2_2:-68873593 Msa0267320:CDS
GGAGATGACTAAAGATATTG+AGG 0.539150 2_2:-68873572 Msa0267320:CDS
TGTAGAAGGTTCCCGAGTCA+TGG 0.539602 2_2:-68875842 Msa0267320:CDS
ATTGACAGTGTTCATGAAGA+TGG 0.540078 2_2:-68874163 Msa0267320:CDS
ACACCATTGGTTTCAAGGAA+AGG 0.541856 2_2:+68873775 None:intergenic
GAGATCTAGATCGGTGGAGA+GGG 0.542522 2_2:-68875705 Msa0267320:CDS
AAGAATCTGGCATTCCTAAG+AGG 0.544319 2_2:-68873531 Msa0267320:CDS
TCATCTCCTCTTCTGAAGGA+AGG 0.544426 2_2:+68873587 None:intergenic
CATCTCCTCTTCTGAAGGAA+GGG 0.547731 2_2:+68873588 None:intergenic
GGGTGTGAGAAGTGGTGTTG+CGG 0.549595 2_2:+68876141 None:intergenic
CCAGGAATATTGGGAAGTCT+CGG 0.551573 2_2:+68875626 None:intergenic
TTAGTCATCTCCTCTTCTGA+AGG 0.554548 2_2:+68873583 None:intergenic
GGGTGAAGGTGGGAAATGGA+CGG 0.554732 2_2:-68875729 Msa0267320:CDS
ATCAAAACCTCTCCATGACT+CGG 0.555813 2_2:+68875830 None:intergenic
TGTTTGAACTGCAGAGCAAG+TGG 0.561360 2_2:-68873639 Msa0267320:CDS
GAATCGTAATCGTAAGCCAC+AGG 0.564603 2_2:+68876233 None:intergenic
GCACGCGAGCTCCGACGAGA+AGG 0.564731 2_2:-68876073 Msa0267320:CDS
AATATGAACTTCTTTAGCAA+CGG 0.565855 2_2:+68874373 None:intergenic
TGCAGTTCAAACAAAGGGAA+AGG 0.568166 2_2:+68873649 None:intergenic
GATGCTGTTGTTGTTTGCAA+TGG 0.576128 2_2:-68875662 Msa0267320:CDS
GTTAAGAATAACACTGAACT+AGG 0.576377 2_2:+68872186 None:intergenic
CGCCGATGACTGCCACGTGG+CGG 0.576460 2_2:+68876119 None:intergenic
GTGTTCCTGCTATGGAAGAA+TGG 0.577997 2_2:-68872386 Msa0267320:CDS
ATATAAAGGCACCTGAACAT+TGG 0.580551 2_2:+68873480 None:intergenic
GATAAGCTTGGAAAGTTACC+TGG 0.583301 2_2:-68874329 Msa0267320:CDS
TTGCTCTGCAGTTCAAACAA+AGG 0.584189 2_2:+68873643 None:intergenic
CACACTCATAATATGGGCAC+GGG 0.585534 2_2:-68873508 Msa0267320:CDS
ACCGTAGATGACAATCGTGT+TGG 0.587555 2_2:-68873748 Msa0267320:CDS
GACAGAGGTGGTGTTTGCTG+GGG 0.588809 2_2:-68875753 Msa0267320:CDS
CCGATGACTGCCACGTGGCG+GGG 0.590887 2_2:+68876121 None:intergenic
TCGAGAAATATCAACCGCAC+TGG 0.594589 2_2:+68874406 None:intergenic
TGAGATCTAGATCGGTGGAG+AGG 0.598722 2_2:-68875706 Msa0267320:CDS
TCCAACACGATTGTCATCTA+CGG 0.599218 2_2:+68873747 None:intergenic
CTACTTGATGTCCTTCTCGT+CGG 0.601788 2_2:+68876062 None:intergenic
TAGGTTGTAGTTCTAATAGG+TGG 0.603871 2_2:-68874434 Msa0267320:CDS
CGGGTCCAAACCGAGTGGGT+CGG 0.604890 2_2:+68875979 None:intergenic
TACTGTAATCATAATTCCTG+TGG 0.606303 2_2:-68876249 Msa0267320:five_prime_UTR
CGGCGCCGATGACTGCCACG+TGG 0.606541 2_2:+68876116 None:intergenic
AACCCAACAAAGGAAAGCCA+TGG 0.607422 2_2:+68873688 None:intergenic
GCACACTCATAATATGGGCA+CGG 0.608045 2_2:-68873509 Msa0267320:CDS
ACGTGGCGGGGTGTGAGAAG+TGG 0.608557 2_2:+68876133 None:intergenic
TCAAAACCTCTCCATGACTC+GGG 0.609566 2_2:+68875831 None:intergenic
GAGATAGAATCCGACCCACT+CGG 0.610030 2_2:-68875989 Msa0267320:CDS
GTGAATTGTATAGGCTCGAG+TGG 0.612633 2_2:+68875942 None:intergenic
AATTTGCCTCGGGAGAGTAT+GGG 0.615300 2_2:-68875911 Msa0267320:CDS
ATGGACGGTGAGATCTAGAT+CGG 0.619336 2_2:-68875714 Msa0267320:CDS
GACGGTGAGATCTAGATCGG+TGG 0.626733 2_2:-68875711 Msa0267320:CDS
GGTTCGGGTCCAAACCGAGT+GGG 0.626979 2_2:+68875975 None:intergenic
AGCCATGGAGCTAACGCCGG+TGG 0.629282 2_2:+68873703 None:intergenic
CAGGCATTAATGCATGGCCA+GGG 0.629289 2_2:-68874805 Msa0267320:CDS
ATCGGTGGAGAGGGAATGTG+TGG 0.636731 2_2:-68875696 Msa0267320:CDS
AAGGTTCCCGAGTCATGGAG+AGG 0.638374 2_2:-68875837 Msa0267320:CDS
GGTTGATATTTCTCGAGACG+TGG 0.639339 2_2:-68874399 Msa0267320:CDS
CTGAGACTTATCGTGACGAG+TGG 0.640097 2_2:-68872317 Msa0267320:CDS
TTTCCTTGAAACCAATGGTG+TGG 0.641481 2_2:-68873773 Msa0267320:CDS
CGGTTCGGGTCCAAACCGAG+TGG 0.649786 2_2:+68875974 None:intergenic
TTTGGTGAGGTTGAAGACAG+AGG 0.656329 2_2:-68875768 Msa0267320:CDS
GAGCGAGGAGAAGAATTGGG+CGG 0.661680 2_2:-68876031 Msa0267320:CDS
CAAGTAGTAGTCTTCGAGCG+AGG 0.661706 2_2:-68876046 Msa0267320:CDS
TGAGACTTATCGTGACGAGT+GGG 0.661820 2_2:-68872316 Msa0267320:CDS
TACCTGGCCATGATAACATG+TGG 0.663783 2_2:-68874313 Msa0267320:CDS
CGGAAACCCATACTCTCCCG+AGG 0.666291 2_2:+68875905 None:intergenic
CTTCCAAGGTAACCCAACAA+AGG 0.675077 2_2:+68873678 None:intergenic
GAAAGCCATGGAGCTAACGC+CGG 0.676417 2_2:+68873700 None:intergenic
TGTTCATGAAGATGGTACAG+TGG 0.683307 2_2:-68874155 Msa0267320:CDS
ACTTCATTGTACATTGCACA+GGG 0.687673 2_2:-68874102 Msa0267320:intron
ACTTCTCACACCCCGCCACG+TGG 0.689666 2_2:-68876131 Msa0267320:CDS
GGTGAGGTTGAAGACAGAGG+TGG 0.690231 2_2:-68875765 Msa0267320:CDS
AATAGGTGGTGCTGCCAGTG+CGG 0.737644 2_2:-68874420 Msa0267320:CDS
AACTGGATTGCTGATCAGTG+CGG 0.766461 2_2:-68872408 Msa0267320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTTTTTATTTTTTTCAAT+TGG - chr2_2:68872933-68872952 Msa0267320:intron 10.0%
!! ATGAATAATCAAATAAAAAT+TGG + chr2_2:68873234-68873253 None:intergenic 10.0%
!! AAATAGCAATAAATAATTTA+AGG + chr2_2:68873355-68873374 None:intergenic 10.0%
!! TTTGATATAACAAAATATAA+AGG + chr2_2:68874916-68874935 None:intergenic 10.0%
!!! AATTATTTTAATGAGAAAGA+GGG + chr2_2:68872076-68872095 None:intergenic 15.0%
!!! AAATTATTTTAATGAGAAAG+AGG + chr2_2:68872077-68872096 None:intergenic 15.0%
!!! CTTTTTTTTTAATGAATAAG+TGG + chr2_2:68873122-68873141 None:intergenic 15.0%
!! CACTTATTCATTAAAAAAAA+AGG - chr2_2:68873120-68873139 Msa0267320:intron 15.0%
!! ATTGTACTTATTATTGTTAT+AGG - chr2_2:68873442-68873461 Msa0267320:intron 15.0%
!! GTTTAAAAGAAAAACTAATA+GGG + chr2_2:68874316-68874335 None:intergenic 15.0%
!! GAATGTAAATTATATATGTT+TGG - chr2_2:68876246-68876265 Msa0267320:five_prime_UTR 15.0%
!! TTAATAAATGGAAGAATCAA+TGG + chr2_2:68872176-68872195 None:intergenic 20.0%
!!! ATTTTGGTGTTGTTAATAAA+TGG + chr2_2:68872188-68872207 None:intergenic 20.0%
!!! ATGTCTCTTTCTTATTTATA+TGG - chr2_2:68872789-68872808 Msa0267320:intron 20.0%
!! ATTAGAAAACAGAATATAAG+AGG + chr2_2:68872861-68872880 None:intergenic 20.0%
!!! ATTTAGTTTAAAGACTAACA+AGG + chr2_2:68872969-68872988 None:intergenic 20.0%
!! CAAAATTCAACTTAACAATT+CGG - chr2_2:68873540-68873559 Msa0267320:CDS 20.0%
!! TAACTAAAAAAGAATCCTAA+TGG + chr2_2:68873685-68873704 None:intergenic 20.0%
!! GGTTTAAAAGAAAAACTAAT+AGG + chr2_2:68874317-68874336 None:intergenic 20.0%
!! AATAGTTAACTATCCTTTAA+TGG - chr2_2:68875902-68875921 Msa0267320:CDS 20.0%
!!! TCTCTTCTTTTCTTCTAAAA+GGG + chr2_2:68872506-68872525 None:intergenic 25.0%
!! TTCTCTTCTTTTCTTCTAAA+AGG + chr2_2:68872507-68872526 None:intergenic 25.0%
! TTTAGAAGAAAAGAAGAGAA+AGG - chr2_2:68872507-68872526 Msa0267320:intron 25.0%
! TTAGAAGAAAAGAAGAGAAA+GGG - chr2_2:68872508-68872527 Msa0267320:intron 25.0%
! AGAAAATAACCAGGAATATT+GGG + chr2_2:68872765-68872784 None:intergenic 25.0%
! AAGAAAATAACCAGGAATAT+TGG + chr2_2:68872766-68872785 None:intergenic 25.0%
!! ATATTCTGTTTTCTAATCCA+AGG - chr2_2:68872864-68872883 Msa0267320:intron 25.0%
! GAAATGAAATTGAAAAACCT+TGG + chr2_2:68872884-68872903 None:intergenic 25.0%
!!! TTTTTTCAATTGGAATGACA+TGG - chr2_2:68872943-68872962 Msa0267320:intron 25.0%
! GATATGTATTGTTATAAGCA+GGG - chr2_2:68873074-68873093 Msa0267320:intron 25.0%
! ATATGTATTGTTATAAGCAG+GGG - chr2_2:68873075-68873094 Msa0267320:intron 25.0%
! TTACCTTTCAACAAAAATGT+TGG - chr2_2:68873200-68873219 Msa0267320:intron 25.0%
! ATATTGATACTAGTTCCATT+AGG - chr2_2:68873667-68873686 Msa0267320:CDS 25.0%
! ACAAATTCAAATAGCTCATT+TGG - chr2_2:68873732-68873751 Msa0267320:CDS 25.0%
!!! TTCTATCCATTTTTTGTGTT+GGG - chr2_2:68873922-68873941 Msa0267320:intron 25.0%
! AATATGAACTTCTTTAGCAA+CGG + chr2_2:68874009-68874028 None:intergenic 25.0%
!!! ATGGTAAAACTTGTTATCTA+TGG - chr2_2:68874098-68874117 Msa0267320:intron 25.0%
! ATTAGTAACCATAAACTGTT+TGG - chr2_2:68874145-68874164 Msa0267320:CDS 25.0%
!! TTTTAAACCAGTTTATGTTG+TGG - chr2_2:68874328-68874347 Msa0267320:CDS 25.0%
!!! TAAGTTTTAAATCGCAAATG+CGG - chr2_2:68874354-68874373 Msa0267320:CDS 25.0%
! TTGAGGACTCAAATATATTT+AGG - chr2_2:68874473-68874492 Msa0267320:intron 25.0%
!!! TTTTATTAGGTTGTTTCTTC+TGG - chr2_2:68874939-68874958 Msa0267320:intron 25.0%
!!! TTTATTAGGTTGTTTCTTCT+GGG - chr2_2:68874940-68874959 Msa0267320:intron 25.0%
! GAACTGTTGGATTTAATTAA+CGG + chr2_2:68875649-68875668 None:intergenic 25.0%
! CACTATAATACAAGAAGAAA+CGG + chr2_2:68875726-68875745 None:intergenic 25.0%
! ATTCTTAATTGTTCAGACTT+AGG - chr2_2:68875762-68875781 Msa0267320:CDS 25.0%
TCATGTTCATTCATGTGATA+GGG + chr2_2:68872107-68872126 None:intergenic 30.0%
ATCATGTTCATTCATGTGAT+AGG + chr2_2:68872108-68872127 None:intergenic 30.0%
TACTGTAATCATAATTCCTG+TGG - chr2_2:68872130-68872149 Msa0267320:three_prime_UTR 30.0%
! TTCTTCTAAAAGGGTAATCT+CGG + chr2_2:68872497-68872516 None:intergenic 30.0%
!! AGAGGTTTTGATGTATTTGA+AGG - chr2_2:68872560-68872579 Msa0267320:intron 30.0%
!!! TTTGCTGAAGATTTTGAGAT+TGG - chr2_2:68872585-68872604 Msa0267320:intron 30.0%
!!! AGATTTTGAGATTGGTGATT+TGG - chr2_2:68872593-68872612 Msa0267320:intron 30.0%
GGATATGTATTGTTATAAGC+AGG - chr2_2:68873073-68873092 Msa0267320:intron 30.0%
! TGACCAACATTTTTGTTGAA+AGG + chr2_2:68873206-68873225 None:intergenic 30.0%
TCACTTACTTGATCTTGAAA+GGG + chr2_2:68873636-68873655 None:intergenic 30.0%
ATCACTTACTTGATCTTGAA+AGG + chr2_2:68873637-68873656 None:intergenic 30.0%
TCAAGATCAAGTAAGTGATA+TGG - chr2_2:68873638-68873657 Msa0267320:CDS 30.0%
AGCATATGTAATATGTTCGA+TGG + chr2_2:68873864-68873883 None:intergenic 30.0%
!!! CTTCTATCCATTTTTTGTGT+TGG - chr2_2:68873921-68873940 Msa0267320:intron 30.0%
TATCTATGGTGAGAATTAGA+TGG - chr2_2:68874112-68874131 Msa0267320:CDS 30.0%
TATGGTTACTAATGTCATGA+TGG + chr2_2:68874138-68874157 None:intergenic 30.0%
ACAGTTATCCAAACAGTTTA+TGG + chr2_2:68874156-68874175 None:intergenic 30.0%
!! CTGCAATATAAATGTTTTGG+AGG - chr2_2:68874377-68874396 Msa0267320:CDS 30.0%
GTTGCTATAACATTGCAATT+TGG + chr2_2:68874424-68874443 None:intergenic 30.0%
! TGCAATTTAAAACCATGTTG+AGG - chr2_2:68874456-68874475 Msa0267320:intron 30.0%
ATATATTTGAGTCCTCAACA+TGG + chr2_2:68874471-68874490 None:intergenic 30.0%
ATCATACTTGTACCTAGAAA+AGG + chr2_2:68874581-68874600 None:intergenic 30.0%
TCCATTATTAGCTGGTAATT+CGG - chr2_2:68875241-68875260 Msa0267320:intron 30.0%
AGAATACTCCATGATATAGA+CGG - chr2_2:68875323-68875342 Msa0267320:intron 30.0%
AAGGATTGAATGGAAATCAA+TGG - chr2_2:68875467-68875486 Msa0267320:intron 30.0%
TGAATGGAAATCAATGGAAA+AGG - chr2_2:68875473-68875492 Msa0267320:intron 30.0%
AAAAAATTGACTAGATCGCA+TGG - chr2_2:68875549-68875568 Msa0267320:intron 30.0%
AAGGTTTAATTACCTGTGTT+TGG - chr2_2:68875588-68875607 Msa0267320:intron 30.0%
AGGTTTAATTACCTGTGTTT+GGG - chr2_2:68875589-68875608 Msa0267320:intron 30.0%
GTCAAATTAACATGAACTGT+TGG + chr2_2:68875662-68875681 None:intergenic 30.0%
CGTTTCTTCTTGTATTATAG+TGG - chr2_2:68875724-68875743 Msa0267320:CDS 30.0%
!! TTGCATTTGACTTCATTTTG+TGG + chr2_2:68875798-68875817 None:intergenic 30.0%
TATACAGAGCTAAAATATCC+TGG - chr2_2:68875819-68875838 Msa0267320:CDS 30.0%
AGAACATGGTTAAAAAAACC+AGG + chr2_2:68875840-68875859 None:intergenic 30.0%
TAACCATGTTCTGTTTCAAA+AGG - chr2_2:68875848-68875867 Msa0267320:CDS 30.0%
AACATATCAGGTTCCATTAA+AGG + chr2_2:68875918-68875937 None:intergenic 30.0%
TAATGGAACCTGATATGTTA+AGG - chr2_2:68875919-68875938 Msa0267320:CDS 30.0%
TACACATTCCTTAACATATC+AGG + chr2_2:68875930-68875949 None:intergenic 30.0%
GTTAAGAATAACACTGAACT+AGG + chr2_2:68876196-68876215 None:intergenic 30.0%
GACATGAGAAGAAAATAACC+AGG + chr2_2:68872774-68872793 None:intergenic 35.0%
ACTTTATGAATGTGCTAGAG+TGG + chr2_2:68872816-68872835 None:intergenic 35.0%
TAATGAATAAGTGGTGTGTC+CGG + chr2_2:68873113-68873132 None:intergenic 35.0%
TTGTCAAGTAATCTGATCGT+TGG + chr2_2:68873152-68873171 None:intergenic 35.0%
! CAATTCGGATAACCTTTTTC+AGG - chr2_2:68873555-68873574 Msa0267320:CDS 35.0%
CATGCATTAATGCCTGAAAA+AGG + chr2_2:68873570-68873589 None:intergenic 35.0%
!!! CTTTTTCAGGCATTAATGCA+TGG - chr2_2:68873568-68873587 Msa0267320:CDS 35.0%
!!! ATCCATTTTTTGTGTTGGGT+AGG - chr2_2:68873926-68873945 Msa0267320:intron 35.0%
AACCTACCCAACACAAAAAA+TGG + chr2_2:68873931-68873950 None:intergenic 35.0%
!! TAGGTTGTAGTTCTAATAGG+TGG - chr2_2:68873945-68873964 Msa0267320:intron 35.0%
TCTGTTGAAGAAGATAAGCT+TGG - chr2_2:68874038-68874057 Msa0267320:intron 35.0%
AATGAAGCCACATGTTATCA+TGG + chr2_2:68874076-68874095 None:intergenic 35.0%
TAACATGTGGCTTCATTCTA+TGG - chr2_2:68874079-68874098 Msa0267320:intron 35.0%
ATTGACAGTGTTCATGAAGA+TGG - chr2_2:68874216-68874235 Msa0267320:intron 35.0%
ACTTCATTGTACATTGCACA+GGG - chr2_2:68874277-68874296 Msa0267320:intron 35.0%
CTTAAGTCCACAACATAAAC+TGG + chr2_2:68874338-68874357 None:intergenic 35.0%
! CGGCTGCAATATAAATGTTT+TGG - chr2_2:68874374-68874393 Msa0267320:CDS 35.0%
CATTGCAATTTGGACATTGT+CGG + chr2_2:68874414-68874433 None:intergenic 35.0%
TTGCAATGTTATAGCAACGA+CGG - chr2_2:68874426-68874445 Msa0267320:CDS 35.0%
AGACTTTATGTCTCAATTGC+AGG + chr2_2:68874508-68874527 None:intergenic 35.0%
! TGTCCATTTGTTCCTTTTCT+AGG - chr2_2:68874566-68874585 Msa0267320:intron 35.0%
GTACCTAGAAAAGGAACAAA+TGG + chr2_2:68874572-68874591 None:intergenic 35.0%
TTTCCTTTCCTTGAAACCAA+TGG - chr2_2:68874601-68874620 Msa0267320:intron 35.0%
GGAGATGACTAAAGATATTG+AGG - chr2_2:68874807-68874826 Msa0267320:intron 35.0%
! TACTTGTCACTTGAAGAATC+TGG - chr2_2:68874835-68874854 Msa0267320:intron 35.0%
ATATTATGAGTGTGCCTCTT+AGG + chr2_2:68874865-68874884 None:intergenic 35.0%
! TAAGAGGCACACTCATAATA+TGG - chr2_2:68874864-68874883 Msa0267320:intron 35.0%
! AAGAGGCACACTCATAATAT+GGG - chr2_2:68874865-68874884 Msa0267320:intron 35.0%
!! ATATAAAGGCACCTGAACAT+TGG + chr2_2:68874902-68874921 None:intergenic 35.0%
! TCAGGAGGTTGTTGATAAAA+CGG + chr2_2:68875181-68875200 None:intergenic 35.0%
ATGGAGGTTAACAGATCTAT+GGG + chr2_2:68875226-68875245 None:intergenic 35.0%
AATGGAGGTTAACAGATCTA+TGG + chr2_2:68875227-68875246 None:intergenic 35.0%
TGTTAACCTCCATTATTAGC+TGG - chr2_2:68875233-68875252 Msa0267320:intron 35.0%
GAATTACCAGCTAATAATGG+AGG + chr2_2:68875242-68875261 None:intergenic 35.0%
ATTATTAGCTGGTAATTCGG+CGG - chr2_2:68875244-68875263 Msa0267320:intron 35.0%
! GGTTTCCAATGTTTGAAATC+CGG - chr2_2:68875268-68875287 Msa0267320:intron 35.0%
GTAAGTTTCCGATGAATTGT+CGG - chr2_2:68875365-68875384 Msa0267320:intron 35.0%
CGGTGGAGTAAAAATTATCT+TGG - chr2_2:68875427-68875446 Msa0267320:intron 35.0%
TCACTGAGATAAGGATTGAA+TGG - chr2_2:68875457-68875476 Msa0267320:intron 35.0%
ATGGAAAAGGACACAAGAAA+TGG - chr2_2:68875486-68875505 Msa0267320:intron 35.0%
AGGACACAAGAAATGGATAT+AGG - chr2_2:68875493-68875512 Msa0267320:intron 35.0%
TTGACTGAATTTCGAAACTC+TGG - chr2_2:68875526-68875545 Msa0267320:intron 35.0%
TTTACTCTAAACCCAAACAC+AGG + chr2_2:68875603-68875622 None:intergenic 35.0%
!!! ATGCCTTTTGAAACAGAACA+TGG + chr2_2:68875854-68875873 None:intergenic 35.0%
ATGGAGAACGCAAATGTATA+TGG - chr2_2:68876012-68876031 Msa0267320:CDS 35.0%
ATATGGCTACATCTAAGAAC+AGG - chr2_2:68876029-68876048 Msa0267320:CDS 35.0%
! TTCATTGGCGTGAACGATTT+TGG + chr2_2:68872204-68872223 None:intergenic 40.0%
GTGGGCATGATGAATTTCAT+TGG + chr2_2:68872219-68872238 None:intergenic 40.0%
! TGGTTCGGAGTGAATTGTAT+AGG + chr2_2:68872449-68872468 None:intergenic 40.0%
AGAAAGGGAGAGATTGTAGA+AGG - chr2_2:68872523-68872542 Msa0267320:intron 40.0%
ATCAAAACCTCTCCATGACT+CGG + chr2_2:68872552-68872571 None:intergenic 40.0%
!! TTGAGATTGGTGATTTGGTG+AGG - chr2_2:68872598-68872617 Msa0267320:intron 40.0%
!! GATGCTGTTGTTGTTTGCAA+TGG - chr2_2:68872717-68872736 Msa0267320:intron 40.0%
TGTATTGTTATAAGCAGGGG+CGG - chr2_2:68873078-68873097 Msa0267320:intron 40.0%
AATGAATAAGTGGTGTGTCC+GGG + chr2_2:68873112-68873131 None:intergenic 40.0%
TACTTGATCTTGAAAGGGCT+CGG + chr2_2:68873631-68873650 None:intergenic 40.0%
!!! TAGCTCATTTGGTTTTGCGT+TGG - chr2_2:68873743-68873762 Msa0267320:CDS 40.0%
!! GGGTAGGTTGTAGTTCTAAT+AGG - chr2_2:68873942-68873961 Msa0267320:intron 40.0%
GATAAGCTTGGAAAGTTACC+TGG - chr2_2:68874050-68874069 Msa0267320:intron 40.0%
TGTTCATGAAGATGGTACAG+TGG - chr2_2:68874224-68874243 Msa0267320:intron 40.0%
! GGTACAGTGGTTTTCAAAGA+TGG - chr2_2:68874237-68874256 Msa0267320:intron 40.0%
GACTTCATTGTACATTGCAC+AGG - chr2_2:68874276-68874295 Msa0267320:intron 40.0%
TTGGACATTGTCGGTAAATG+TGG + chr2_2:68874405-68874424 None:intergenic 40.0%
TGCAATGTTATAGCAACGAC+GGG - chr2_2:68874427-68874446 Msa0267320:CDS 40.0%
!! ACACCATTGGTTTCAAGGAA+AGG + chr2_2:68874607-68874626 None:intergenic 40.0%
TTTCCTTGAAACCAATGGTG+TGG - chr2_2:68874606-68874625 Msa0267320:intron 40.0%
TCCAACACGATTGTCATCTA+CGG + chr2_2:68874635-68874654 None:intergenic 40.0%
GGAAAAACATGCTTGTAGAG+CGG + chr2_2:68874658-68874677 None:intergenic 40.0%
! CTACAAGCATGTTTTTCCAC+CGG - chr2_2:68874660-68874679 Msa0267320:intron 40.0%
TTTCCTTTGTTGGGTTACCT+TGG - chr2_2:68874698-68874717 Msa0267320:intron 40.0%
TGCAGTTCAAACAAAGGGAA+AGG + chr2_2:68874733-68874752 None:intergenic 40.0%
TGCTCTGCAGTTCAAACAAA+GGG + chr2_2:68874738-68874757 None:intergenic 40.0%
TTGCTCTGCAGTTCAAACAA+AGG + chr2_2:68874739-68874758 None:intergenic 40.0%
TTAGTCATCTCCTCTTCTGA+AGG + chr2_2:68874799-68874818 None:intergenic 40.0%
AAGAATCTGGCATTCCTAAG+AGG - chr2_2:68874848-68874867 Msa0267320:intron 40.0%
CAGTTGTTCGATGCATCTAA+TGG - chr2_2:68875016-68875035 Msa0267320:intron 40.0%
TGGAGGTTAACAGATCTATG+GGG + chr2_2:68875225-68875244 None:intergenic 40.0%
GCCGAATTACCAGCTAATAA+TGG + chr2_2:68875245-68875264 None:intergenic 40.0%
CTCTACCGGATTTCAAACAT+TGG + chr2_2:68875276-68875295 None:intergenic 40.0%
! ATGTTTGAAATCCGGTAGAG+TGG - chr2_2:68875276-68875295 Msa0267320:intron 40.0%
TTGCAGAACCGTCTATATCA+TGG + chr2_2:68875334-68875353 None:intergenic 40.0%
AGACGGTTCTGCAATTATCT+CGG - chr2_2:68875340-68875359 Msa0267320:intron 40.0%
TTACTCCACCGACAATTCAT+CGG + chr2_2:68875376-68875395 None:intergenic 40.0%
ACCGACAATTCATTGTTCGA+CGG + chr2_2:68875411-68875430 None:intergenic 40.0%
GGTTGTGATTCACTGAGATA+AGG - chr2_2:68875448-68875467 Msa0267320:intron 40.0%
TAGATCGCATGGAAGAAGAA+GGG - chr2_2:68875560-68875579 Msa0267320:intron 40.0%
AGGAATGTGTATTCTTGCAG+TGG - chr2_2:68875939-68875958 Msa0267320:CDS 40.0%
GGAATGTGTATTCTTGCAGT+GGG - chr2_2:68875940-68875959 Msa0267320:CDS 40.0%
GAATCGTAATCGTAAGCCAC+AGG + chr2_2:68872149-68872168 None:intergenic 45.0%
CTACTTGATGTCCTTCTCGT+CGG + chr2_2:68872320-68872339 None:intergenic 45.0%
TTCGAGCGAGGAGAAGAATT+GGG - chr2_2:68872345-68872364 Msa0267320:CDS 45.0%
AGAAGAATTGGGCGGTTCAT+GGG - chr2_2:68872356-68872375 Msa0267320:CDS 45.0%
GTGAATTGTATAGGCTCGAG+TGG + chr2_2:68872440-68872459 None:intergenic 45.0%
! AATTTGCCTCGGGAGAGTAT+GGG - chr2_2:68872468-68872487 Msa0267320:intron 45.0%
TCAAAACCTCTCCATGACTC+GGG + chr2_2:68872551-68872570 None:intergenic 45.0%
TTTGGTGAGGTTGAAGACAG+AGG - chr2_2:68872611-68872630 Msa0267320:intron 45.0%
ATGGACGGTGAGATCTAGAT+CGG - chr2_2:68872665-68872684 Msa0267320:intron 45.0%
CCAGGAATATTGGGAAGTCT+CGG + chr2_2:68872756-68872775 None:intergenic 45.0%
GTATTGTTATAAGCAGGGGC+GGG - chr2_2:68873079-68873098 Msa0267320:intron 45.0%
TATTGTTATAAGCAGGGGCG+GGG - chr2_2:68873080-68873099 Msa0267320:intron 45.0%
GCTCGGGTGTTCTGTAATTA+TGG + chr2_2:68873614-68873633 None:intergenic 45.0%
ACTTGATCTTGAAAGGGCTC+GGG + chr2_2:68873630-68873649 None:intergenic 45.0%
ATGGTGCGTTACATTGGACA+CGG + chr2_2:68873845-68873864 None:intergenic 45.0%
TGTTCGATGGTGCGTTACAT+TGG + chr2_2:68873851-68873870 None:intergenic 45.0%
TCGAGAAATATCAACCGCAC+TGG + chr2_2:68873976-68873995 None:intergenic 45.0%
! GGTTGATATTTCTCGAGACG+TGG - chr2_2:68873980-68873999 Msa0267320:intron 45.0%
TACCTGGCCATGATAACATG+TGG - chr2_2:68874066-68874085 Msa0267320:intron 45.0%
!! TCACCACACCATTGGTTTCA+AGG + chr2_2:68874612-68874631 None:intergenic 45.0%
ACCGTAGATGACAATCGTGT+TGG - chr2_2:68874631-68874650 Msa0267320:intron 45.0%
CTCCATGGCTTTCCTTTGTT+GGG - chr2_2:68874689-68874708 Msa0267320:intron 45.0%
AACCCAACAAAGGAAAGCCA+TGG + chr2_2:68874694-68874713 None:intergenic 45.0%
CTTCCAAGGTAACCCAACAA+AGG + chr2_2:68874704-68874723 None:intergenic 45.0%
CTTTGTTGGGTTACCTTGGA+AGG - chr2_2:68874702-68874721 Msa0267320:intron 45.0%
TGTTTGAACTGCAGAGCAAG+TGG - chr2_2:68874740-68874759 Msa0267320:intron 45.0%
! CATCTCCTCTTCTGAAGGAA+GGG + chr2_2:68874794-68874813 None:intergenic 45.0%
! TCATCTCCTCTTCTGAAGGA+AGG + chr2_2:68874795-68874814 None:intergenic 45.0%
GCACACTCATAATATGGGCA+CGG - chr2_2:68874870-68874889 Msa0267320:intron 45.0%
CACACTCATAATATGGGCAC+GGG - chr2_2:68874871-68874890 Msa0267320:intron 45.0%
GAGAAGAAAGGGGAATTGAC+GGG + chr2_2:68875094-68875113 None:intergenic 45.0%
GGAGAAGAAAGGGGAATTGA+CGG + chr2_2:68875095-68875114 None:intergenic 45.0%
TAGGAAAACGCATCCGACAA+CGG + chr2_2:68875141-68875160 None:intergenic 45.0%
! GGAGGTTGTTGATAAAACGG+CGG + chr2_2:68875178-68875197 None:intergenic 45.0%
TCAAGTTACAGCCACTCTAC+CGG + chr2_2:68875290-68875309 None:intergenic 45.0%
AGTTTCCGATGAATTGTCGG+TGG - chr2_2:68875368-68875387 Msa0267320:intron 45.0%
GACAATTCATTGTTCGACGG+CGG + chr2_2:68875408-68875427 None:intergenic 45.0%
GCCGTCGAACAATGAATTGT+CGG - chr2_2:68875407-68875426 Msa0267320:intron 45.0%
GTCGAACAATGAATTGTCGG+TGG - chr2_2:68875410-68875429 Msa0267320:intron 45.0%
CTAGATCGCATGGAAGAAGA+AGG - chr2_2:68875559-68875578 Msa0267320:intron 45.0%
TGCTTGACAGCAGTGAATCA+CGG - chr2_2:68875699-68875718 Msa0267320:CDS 45.0%
TGCAGTGGGACTACAATAAC+TGG - chr2_2:68875954-68875973 Msa0267320:CDS 45.0%
AACTGGATTGCTGATCAGTG+CGG - chr2_2:68875971-68875990 Msa0267320:CDS 45.0%
GTGTTCCTGCTATGGAAGAA+TGG - chr2_2:68875993-68876012 Msa0267320:CDS 45.0%
GTTCTCCATTCTTCCATAGC+AGG + chr2_2:68876001-68876020 None:intergenic 45.0%
TGAGACTTATCGTGACGAGT+GGG - chr2_2:68876063-68876082 Msa0267320:CDS 45.0%
!! AAAAAAAGTAATAAAAAATA+GGG + chr2_2:68872049-68872068 None:intergenic 5.0%
!! TAAAAAAAGTAATAAAAAAT+AGG + chr2_2:68872050-68872069 None:intergenic 5.0%
!!! AGAAATAATTTTTTTAAAAA+AGG - chr2_2:68873490-68873509 Msa0267320:intron 5.0%
!!! TTATATCAAATTTTTTTATT+AGG - chr2_2:68874926-68874945 Msa0267320:intron 5.0%
CAAGTAGTAGTCTTCGAGCG+AGG - chr2_2:68872333-68872352 Msa0267320:CDS 50.0%
CTTCGAGCGAGGAGAAGAAT+TGG - chr2_2:68872344-68872363 Msa0267320:CDS 50.0%
GAGAAGAATTGGGCGGTTCA+TGG - chr2_2:68872355-68872374 Msa0267320:CDS 50.0%
AGTGGGTCGGATTCTATCTC+TGG + chr2_2:68872390-68872409 None:intergenic 50.0%
GAGATAGAATCCGACCCACT+CGG - chr2_2:68872390-68872409 Msa0267320:CDS 50.0%
AGTGGATAAGCTTCCGGTTC+GGG + chr2_2:68872422-68872441 None:intergenic 50.0%
GAGTGGATAAGCTTCCGGTT+CGG + chr2_2:68872423-68872442 None:intergenic 50.0%
CACTCCGAACCAATTTGCCT+CGG - chr2_2:68872457-68872476 Msa0267320:intron 50.0%
ACTCCGAACCAATTTGCCTC+GGG - chr2_2:68872458-68872477 Msa0267320:intron 50.0%
TCTCCCGAGGCAAATTGGTT+CGG + chr2_2:68872464-68872483 None:intergenic 50.0%
CATACTCTCCCGAGGCAAAT+TGG + chr2_2:68872469-68872488 None:intergenic 50.0%
CAATTTGCCTCGGGAGAGTA+TGG - chr2_2:68872467-68872486 Msa0267320:intron 50.0%
TGTAGAAGGTTCCCGAGTCA+TGG - chr2_2:68872537-68872556 Msa0267320:intron 50.0%
AAGACAGAGGTGGTGTTTGC+TGG - chr2_2:68872624-68872643 Msa0267320:intron 50.0%
AGACAGAGGTGGTGTTTGCT+GGG - chr2_2:68872625-68872644 Msa0267320:intron 50.0%
TGAGATCTAGATCGGTGGAG+AGG - chr2_2:68872673-68872692 Msa0267320:intron 50.0%
GAGATCTAGATCGGTGGAGA+GGG - chr2_2:68872674-68872693 Msa0267320:intron 50.0%
CCGAGACTTCCCAATATTCC+TGG - chr2_2:68872753-68872772 Msa0267320:intron 50.0%
TCCCATGAGCATAGCTCAGT+TGG - chr2_2:68873047-68873066 Msa0267320:intron 50.0%
GCCAACTGAGCTATGCTCAT+GGG + chr2_2:68873051-68873070 None:intergenic 50.0%
AGCCAACTGAGCTATGCTCA+TGG + chr2_2:68873052-68873071 None:intergenic 50.0%
ATGAGCATAGCTCAGTTGGC+TGG - chr2_2:68873051-68873070 Msa0267320:intron 50.0%
TGAGCATAGCTCAGTTGGCT+GGG - chr2_2:68873052-68873071 Msa0267320:intron 50.0%
TCAGGCATTAATGCATGGCC+AGG - chr2_2:68873573-68873592 Msa0267320:CDS 50.0%
CAGGCATTAATGCATGGCCA+GGG - chr2_2:68873574-68873593 Msa0267320:CDS 50.0%
TGGCTATGCATTTGCTTCCC+TGG + chr2_2:68873594-68873613 None:intergenic 50.0%
ATTGGACACGGACGTCACTT+TGG + chr2_2:68873833-68873852 None:intergenic 50.0%
AGCCACATGTTATCATGGCC+AGG + chr2_2:68874071-68874090 None:intergenic 50.0%
ATCTACGGTCACCACACCAT+TGG + chr2_2:68874620-68874639 None:intergenic 50.0%
GCTCCATGGCTTTCCTTTGT+TGG - chr2_2:68874688-68874707 Msa0267320:intron 50.0%
CATTGCCCTTCCTTCAGAAG+AGG - chr2_2:68874786-68874805 Msa0267320:CDS 50.0%
TCATAATATGGGCACGGGCT+CGG - chr2_2:68874876-68874895 Msa0267320:intron 50.0%
! AAGGGGAATTGACGGGTCTA+GGG + chr2_2:68875087-68875106 None:intergenic 50.0%
! AAAGGGGAATTGACGGGTCT+AGG + chr2_2:68875088-68875107 None:intergenic 50.0%
TCATCAACAACCGCCGTTGT+CGG - chr2_2:68875125-68875144 Msa0267320:intron 50.0%
GGCGGTGACAACACAGATTT+AGG + chr2_2:68875160-68875179 None:intergenic 50.0%
ATTAGCTGGTAATTCGGCGG+CGG - chr2_2:68875247-68875266 Msa0267320:intron 50.0%
TGGAAGAAGAAGGGACGACA+AGG - chr2_2:68875569-68875588 Msa0267320:intron 50.0%
CACTCGTCACGATAAGTCTC+AGG + chr2_2:68876064-68876083 None:intergenic 50.0%
CTGAGACTTATCGTGACGAG+TGG - chr2_2:68876062-68876081 Msa0267320:CDS 50.0%
!! GTGAGAAGTGGTGTTGCGGT+GGG + chr2_2:68872237-68872256 None:intergenic 55.0%
!! TGTGAGAAGTGGTGTTGCGG+TGG + chr2_2:68872238-68872257 None:intergenic 55.0%
! GGGTGTGAGAAGTGGTGTTG+CGG + chr2_2:68872241-68872260 None:intergenic 55.0%
GAGCGAGGAGAAGAATTGGG+CGG - chr2_2:68872348-68872367 Msa0267320:CDS 55.0%
AGAATCCGACCCACTCGGTT+TGG - chr2_2:68872395-68872414 Msa0267320:CDS 55.0%
GGCTCGAGTGGATAAGCTTC+CGG + chr2_2:68872428-68872447 None:intergenic 55.0%
AAGGTTCCCGAGTCATGGAG+AGG - chr2_2:68872542-68872561 Msa0267320:intron 55.0%
GGTGAGGTTGAAGACAGAGG+TGG - chr2_2:68872614-68872633 Msa0267320:intron 55.0%
! GACAGAGGTGGTGTTTGCTG+GGG - chr2_2:68872626-68872645 Msa0267320:intron 55.0%
GGGTGAAGGTGGGAAATGGA+CGG - chr2_2:68872650-68872669 Msa0267320:intron 55.0%
GACGGTGAGATCTAGATCGG+TGG - chr2_2:68872668-68872687 Msa0267320:intron 55.0%
ATCGGTGGAGAGGGAATGTG+TGG - chr2_2:68872683-68872702 Msa0267320:intron 55.0%
!! AATAGGTGGTGCTGCCAGTG+CGG - chr2_2:68873959-68873978 Msa0267320:intron 55.0%
GAAAGCCATGGAGCTAACGC+CGG + chr2_2:68874682-68874701 None:intergenic 55.0%
GGGAAAGGAGCAACCTTCCA+AGG + chr2_2:68874718-68874737 None:intergenic 55.0%
CTGCAGAGCAAGTGGATAGC+TGG - chr2_2:68874748-68874767 Msa0267320:intron 55.0%
! AGGGGAATTGACGGGTCTAG+GGG + chr2_2:68875086-68875105 None:intergenic 55.0%
CGGGAAGGTGGAGAAGAAAG+GGG + chr2_2:68875104-68875123 None:intergenic 55.0%
CCGGGAAGGTGGAGAAGAAA+GGG + chr2_2:68875105-68875124 None:intergenic 55.0%
CCCTTTCTTCTCCACCTTCC+CGG - chr2_2:68875102-68875121 Msa0267320:intron 55.0%
ACCGGGAAGGTGGAGAAGAA+AGG + chr2_2:68875106-68875125 None:intergenic 55.0%
!! GTTGTTGATGACCGGGAAGG+TGG + chr2_2:68875116-68875135 None:intergenic 55.0%
!! AACGGCGGTTGTTGATGACC+GGG + chr2_2:68875123-68875142 None:intergenic 55.0%
!! CAACGGCGGTTGTTGATGAC+CGG + chr2_2:68875124-68875143 None:intergenic 55.0%
GAAAACGCATCCGACAACGG+CGG + chr2_2:68875138-68875157 None:intergenic 55.0%
CAACAACCTCCTGAGACCGT+TGG - chr2_2:68875187-68875206 Msa0267320:intron 55.0%
TCAGTGCGGTGTTCCTGCTA+TGG - chr2_2:68875985-68876004 Msa0267320:CDS 55.0%
! GCGTGCTGCTACTAAGCCTC+CGG + chr2_2:68872292-68872311 None:intergenic 60.0%
GGTTCGGGTCCAAACCGAGT+GGG + chr2_2:68872407-68872426 None:intergenic 60.0%
!! CACTCGGTTTGGACCCGAAC+CGG - chr2_2:68872406-68872425 Msa0267320:CDS 60.0%
CGGAAACCCATACTCTCCCG+AGG + chr2_2:68872477-68872496 None:intergenic 60.0%
! AGAGGTGGTGTTTGCTGGGG+TGG - chr2_2:68872629-68872648 Msa0267320:intron 60.0%
! GAGGTGGTGTTTGCTGGGGT+GGG - chr2_2:68872630-68872649 Msa0267320:intron 60.0%
! GTGTTTGCTGGGGTGGGTGA+AGG - chr2_2:68872636-68872655 Msa0267320:intron 60.0%
TTTGCTGGGGTGGGTGAAGG+TGG - chr2_2:68872639-68872658 Msa0267320:intron 60.0%
TTGCTGGGGTGGGTGAAGGT+GGG - chr2_2:68872640-68872659 Msa0267320:intron 60.0%
GGGTGGGTGAAGGTGGGAAA+TGG - chr2_2:68872646-68872665 Msa0267320:intron 60.0%
TTCCACCGGCGTTAGCTCCA+TGG - chr2_2:68874674-68874693 Msa0267320:intron 60.0%
!! GCGGTTGTTGATGACCGGGA+AGG + chr2_2:68875119-68875138 None:intergenic 60.0%
CAACCTCCTGAGACCGTTGG+CGG - chr2_2:68875190-68875209 Msa0267320:intron 60.0%
AATCCTCCGCCAACGGTCTC+AGG + chr2_2:68875199-68875218 None:intergenic 60.0%
GGGGAACAATCCTCCGCCAA+CGG + chr2_2:68875206-68875225 None:intergenic 60.0%
! ACGTGGCGGGGTGTGAGAAG+TGG + chr2_2:68872249-68872268 None:intergenic 65.0%
ACTTCTCACACCCCGCCACG+TGG - chr2_2:68872248-68872267 Msa0267320:exon 65.0%
TGCTACTAAGCCTCCGGCGC+CGG + chr2_2:68872286-68872305 None:intergenic 65.0%
CGGGTCCAAACCGAGTGGGT+CGG + chr2_2:68872403-68872422 None:intergenic 65.0%
! CGGTTCGGGTCCAAACCGAG+TGG + chr2_2:68872408-68872427 None:intergenic 65.0%
AGCCATGGAGCTAACGCCGG+TGG + chr2_2:68874679-68874698 None:intergenic 65.0%
CACGGGCTCGGCCAATGTTC+AGG - chr2_2:68874888-68874907 Msa0267320:intron 65.0%
CCGATGACTGCCACGTGGCG+GGG + chr2_2:68872261-68872280 None:intergenic 70.0%
CCCCGCCACGTGGCAGTCAT+CGG - chr2_2:68872258-68872277 Msa0267320:exon 70.0%
GCCGATGACTGCCACGTGGC+GGG + chr2_2:68872262-68872281 None:intergenic 70.0%
CGCCGATGACTGCCACGTGG+CGG + chr2_2:68872263-68872282 None:intergenic 70.0%
CACGTGGCAGTCATCGGCGC+CGG - chr2_2:68872264-68872283 Msa0267320:CDS 70.0%
GCACGCGAGCTCCGACGAGA+AGG - chr2_2:68872306-68872325 Msa0267320:CDS 70.0%
CCTCCGCCAACGGTCTCAGG+AGG + chr2_2:68875196-68875215 None:intergenic 70.0%
CCTCCTGAGACCGTTGGCGG+AGG - chr2_2:68875193-68875212 Msa0267320:intron 70.0%
!! CGGCGCCGATGACTGCCACG+TGG + chr2_2:68872266-68872285 None:intergenic 75.0%
GCAGGGGCGGGGTCTGAACC+CGG - chr2_2:68873091-68873110 Msa0267320:intron 75.0%
!!! GCAGTCATCGGCGCCGGCGC+CGG - chr2_2:68872270-68872289 Msa0267320:CDS 80.0%
!!! GTCATCGGCGCCGGCGCCGG+AGG - chr2_2:68872273-68872292 Msa0267320:CDS 85.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 68872044 68876357 68872044 ID=Msa0267320;Name=Msa0267320
chr2_2 mRNA 68872044 68876357 68872044 ID=Msa0267320-mRNA-1;Parent=Msa0267320;Name=Msa0267320-mRNA-1;_AED=0.03;_eAED=0.03;_QI=175|1|1|1|1|1|6|216|455
chr2_2 exon 68872044 68872442 68872044 ID=Msa0267320-mRNA-1:exon:21868;Parent=Msa0267320-mRNA-1
chr2_2 exon 68873492 68873813 68873492 ID=Msa0267320-mRNA-1:exon:21867;Parent=Msa0267320-mRNA-1
chr2_2 exon 68874103 68874185 68874103 ID=Msa0267320-mRNA-1:exon:21866;Parent=Msa0267320-mRNA-1
chr2_2 exon 68874301 68874453 68874301 ID=Msa0267320-mRNA-1:exon:21865;Parent=Msa0267320-mRNA-1
chr2_2 exon 68874754 68874824 68874754 ID=Msa0267320-mRNA-1:exon:21864;Parent=Msa0267320-mRNA-1
chr2_2 exon 68875627 68876357 68875627 ID=Msa0267320-mRNA-1:exon:21863;Parent=Msa0267320-mRNA-1
chr2_2 five_prime_UTR 68876183 68876357 68876183 ID=Msa0267320-mRNA-1:five_prime_utr;Parent=Msa0267320-mRNA-1
chr2_2 CDS 68875627 68876182 68875627 ID=Msa0267320-mRNA-1:cds;Parent=Msa0267320-mRNA-1
chr2_2 CDS 68874754 68874824 68874754 ID=Msa0267320-mRNA-1:cds;Parent=Msa0267320-mRNA-1
chr2_2 CDS 68874301 68874453 68874301 ID=Msa0267320-mRNA-1:cds;Parent=Msa0267320-mRNA-1
chr2_2 CDS 68874103 68874185 68874103 ID=Msa0267320-mRNA-1:cds;Parent=Msa0267320-mRNA-1
chr2_2 CDS 68873492 68873813 68873492 ID=Msa0267320-mRNA-1:cds;Parent=Msa0267320-mRNA-1
chr2_2 CDS 68872260 68872442 68872260 ID=Msa0267320-mRNA-1:cds;Parent=Msa0267320-mRNA-1
chr2_2 three_prime_UTR 68872044 68872259 68872044 ID=Msa0267320-mRNA-1:three_prime_utr;Parent=Msa0267320-mRNA-1
Gene Sequence

>Msa0267320

ATGAAATTCATCATGCCCACCGCAACACCACTTCTCACACCCCGCCACGTGGCAGTCATCGGCGCCGGCGCCGGAGGCTTAGTAGCAGCACGCGAGCTCCGACGAGAAGGACATCAAGTAGTAGTCTTCGAGCGAGGAGAAGAATTGGGCGGTTCATGGGTCTATACTCCAGAGATAGAATCCGACCCACTCGGTTTGGACCCGAACCGGAAGCTTATCCACTCGAGCCTATACAATTCACTCCGAACCAATTTGCCTCGGGAGAGTATGGGTTTCCGAGATTACCCTTTTAGAAGAAAAGAAGAGAAAGGGAGAGATTGTAGAAGGTTCCCGAGTCATGGAGAGGTTTTGATGTATTTGAAGGATTTTGCTGAAGATTTTGAGATTGGTGATTTGGTGAGGTTGAAGACAGAGGTGGTGTTTGCTGGGGTGGGTGAAGGTGGGAAATGGACGGTGAGATCTAGATCGGTGGAGAGGGAATGTGTGGATGAGATTTACGATGCTGTTGTTGTTTGCAATGGACATTATTTTCAACCGAGACTTCCCAATATTCCTGGCATTAATGCATGGCCAGGGAAGCAAATGCATAGCCATAATTACAGAACACCCGAGCCCTTTCAAGATCAAGTTGTAGTTCTAATAGGTGGTGCTGCCAGTGCGGTTGATATTTCTCGAGACGTGGCAACCGTTGCTAAAGAAGTTCATATTGCAGCTAGATCTGTTGAAGAAGATAAGCTTGGAAAGTTACCTGGCCATGATAACATGTGGCTTCATTCTATGATTGACAGTGTTCATGAAGATGGTACAGTGGTTTTCAAAGATGGAAATGCAGTTATTGCTGACTTCATTGTACATTGCACAGGGTACAAGTATGATTTTCCTTTCCTTGAAACCAATGGTGTGGTGACCGTAGATGACAATCGTGTTGGACCGCTCTACAAGCATGTTTTTCCACCGGCGTTAGCTCCATGGCTTTCCTTTGTTGGGTTACCTTGGAAGGTTGCTCCTTTCCCTTTGTTTGAACTGCAGAGCAAGTGGATAGCTGGAGTTTTGTCTAATCGCATTGCCCTTCCTTCAGAAGAGGAGATGACTAAAGATATTGAGGCTTTTTACTTGTCACTTGAAGAATCTGGCATTCCTAAGAGGCACACTCATAATATGGGCACGGGCTCGGCCAATGTTCAGTGGGACTACAATAACTGGATTGCTGATCAGTGCGGTGTTCCTGCTATGGAAGAATGGAGAACGCAAATGTATATGGCTACATCTAAGAACAGGCTCTTGCGACCTGAGACTTATCGTGACGAGTGGGATGATGATGACATTGTTCAACAAGCTGAGCATGAATTTGCTAATTATCAGATATAA

Protein sequence

>Msa0267320

MKFIMPTATPLLTPRHVAVIGAGAGGLVAARELRREGHQVVVFERGEELGGSWVYTPEIESDPLGLDPNRKLIHSSLYNSLRTNLPRESMGFRDYPFRRKEEKGRDCRRFPSHGEVLMYLKDFAEDFEIGDLVRLKTEVVFAGVGEGGKWTVRSRSVERECVDEIYDAVVVCNGHYFQPRLPNIPGINAWPGKQMHSHNYRTPEPFQDQVVVLIGGAASAVDISRDVATVAKEVHIAARSVEEDKLGKLPGHDNMWLHSMIDSVHEDGTVVFKDGNAVIADFIVHCTGYKYDFPFLETNGVVTVDDNRVGPLYKHVFPPALAPWLSFVGLPWKVAPFPLFELQSKWIAGVLSNRIALPSEEEMTKDIEAFYLSLEESGIPKRHTHNMGTGSANVQWDYNNWIADQCGVPAMEEWRTQMYMATSKNRLLRPETYRDEWDDDDIVQQAEHEFANYQI*