AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1165470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165470 MtrunA17_Chr7g0269971 94.944 989 23 2 1 989 1 962 0.0 1927
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165470 AT2G47390.1 73.952 1002 207 8 1 989 1 961 0.0 1488

Find 284 sgRNAs with CRISPR-Local

Find 423 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGGTACTACAAAGGATTT+TGG 0.176444 7_4:-57373174 Msa1165470:CDS
CGCACACTATTGGATGTAAT+TGG 0.187206 7_4:+57372967 None:intergenic
ATGTCATTCTACACCGGTTT+AGG 0.190826 7_4:-57373663 Msa1165470:CDS
CTCCATAACTCTACCTTCTT+TGG 0.204039 7_4:+57373045 None:intergenic
GCCAACTAATAAAATTATAT+TGG 0.224218 7_4:+57371266 None:intergenic
AAGGGATGCGTTCTATTAAT+TGG 0.232507 7_4:-57372942 Msa1165470:CDS
ACCTGCATGGTTAATGTTCC+TGG 0.237707 7_4:+57369910 None:intergenic
CCCTTCTTTGGCTGGCTAAA+AGG 0.247608 7_4:-57370979 Msa1165470:intron
ATGTTAGATGATTCAGCTTT+AGG 0.249725 7_4:-57373885 Msa1165470:intron
CCAGGAACCAAAGGTTTCTT+TGG 0.255796 7_4:+57373330 None:intergenic
AAATTTATCTTCGCACCTTC+AGG 0.267105 7_4:+57373582 None:intergenic
ATACTAGTAAACTCAGAGTA+TGG 0.276226 7_4:-57373494 Msa1165470:CDS
CATCCCTTTCCGCACACTAT+TGG 0.287295 7_4:+57372957 None:intergenic
GTTCCACGTCAGCCCTTCTT+TGG 0.287647 7_4:-57370991 Msa1165470:CDS
CCAAAGAAACCTTTGGTTCC+TGG 0.299895 7_4:-57373330 Msa1165470:CDS
GGCTCTCCAAATGAATTTGC+AGG 0.321351 7_4:-57371019 Msa1165470:CDS
ATAAGCCATCAACGCTTTAC+TGG 0.328861 7_4:-57372912 Msa1165470:intron
AACAGAACCCTTACTCCTTT+CGG 0.334629 7_4:-57370231 Msa1165470:CDS
TGTCATTCTACACCGGTTTA+GGG 0.339719 7_4:-57373662 Msa1165470:CDS
GTATCTACAGAGGAATTTCT+TGG 0.343312 7_4:-57371811 Msa1165470:intron
CCAATCCCTGCAAATTCATT+TGG 0.345807 7_4:+57371013 None:intergenic
AGACGGTCCTTTGCCATGTT+TGG 0.348852 7_4:-57371095 Msa1165470:CDS
CACGTCAGCCCTTCTTTGGC+TGG 0.352807 7_4:-57370987 Msa1165470:CDS
CCAAATGAATTTGCAGGGAT+TGG 0.353554 7_4:-57371013 Msa1165470:CDS
AAGGAGATTTACAGTTAGAT+AGG 0.354368 7_4:-57371330 Msa1165470:CDS
ATGCATGTCCTTTGGGAAAC+AGG 0.358343 7_4:-57369652 Msa1165470:CDS
TTCTTTGCTGCCACTTCCAC+TGG 0.366293 7_4:+57369507 None:intergenic
CAGGTAGTAAGGAACGAATC+TGG 0.368966 7_4:-57371411 Msa1165470:CDS
GTCCTTTGCCATGTTTGGTT+TGG 0.372525 7_4:-57371090 Msa1165470:CDS
GTGTTCCTCCACCTGTGATC+AGG 0.380200 7_4:-57373851 Msa1165470:CDS
TTGGCTGGTTTACGTATTGA+TGG 0.381621 7_4:-57373708 Msa1165470:CDS
GGCCCAACCATTCCTATTAT+CGG 0.383067 7_4:-57370803 Msa1165470:CDS
TGGGTTGCAGATGTGGAAAC+AGG 0.384759 7_4:-57373474 Msa1165470:CDS
CCAACTAATAAAATTATATT+GGG 0.389207 7_4:+57371267 None:intergenic
CAGCAGTGAGAGGTGCTAAA+TGG 0.390176 7_4:+57374651 None:intergenic
AAAGCATCATGCATGTCCTT+TGG 0.391552 7_4:-57369660 Msa1165470:CDS
TGCAGGTTTGCAATCCTATC+TGG 0.394529 7_4:-57370824 Msa1165470:intron
ATCATAATGTACTTCTCATC+TGG 0.396199 7_4:+57373117 None:intergenic
AGGAATGGAACGTTCCCTTC+TGG 0.397491 7_4:+57371539 None:intergenic
TATTCAAGTAAGAACATTCC+AGG 0.401088 7_4:-57373271 Msa1165470:CDS
CAAGGTACAATAAAAGAGTA+TGG 0.402576 7_4:+57373078 None:intergenic
GGTGGAGCTCCACGAGTTGA+TGG 0.405378 7_4:+57373351 None:intergenic
AAGCATCATGCATGTCCTTT+GGG 0.405693 7_4:-57369659 Msa1165470:CDS
TTCTTGGTGTGATGATTCAC+TGG 0.405757 7_4:-57371795 Msa1165470:CDS
GAATGAAGACAGAACTCTTT+GGG 0.410153 7_4:-57370028 Msa1165470:CDS
CATCTCTACATAAGTATTAG+TGG 0.411001 7_4:+57370002 None:intergenic
GGTGGACATGGAGGCGAAGT+TGG 0.411211 7_4:+57374685 None:intergenic
CTATACCAGTAAAGCGTTGA+TGG 0.417274 7_4:+57372907 None:intergenic
GAATAGAAGCAGCAAGCAAT+TGG 0.426131 7_4:+57369791 None:intergenic
TTCCAAAGAAGGTAGAGTTA+TGG 0.426707 7_4:-57373047 Msa1165470:CDS
CCAAAATGTTGCAGAAATAC+AGG 0.431225 7_4:-57371430 Msa1165470:intron
AAGGATAAATGTCGAGCATC+AGG 0.434606 7_4:+57373546 None:intergenic
TGTTGTGGAATTGCTCGTTC+TGG 0.435538 7_4:-57370261 Msa1165470:CDS
ATTCATGACTGCCAACCTTC+TGG 0.436917 7_4:-57370304 Msa1165470:CDS
GTGAAGTAGAGGCTAATGAT+AGG 0.437329 7_4:-57370775 Msa1165470:intron
GGCAAAGGACCGTCTGTTGA+TGG 0.438693 7_4:+57371103 None:intergenic
AGAATGAAGACAGAACTCTT+TGG 0.438942 7_4:-57370029 Msa1165470:CDS
GTGCCGATGGAAAATTTGTC+AGG 0.439578 7_4:-57373023 Msa1165470:CDS
GATGATTCAGCTTTAGGAGT+AGG 0.439917 7_4:-57373879 Msa1165470:CDS
TCTTTGCTCTTAAATTCTCC+AGG 0.440008 7_4:+57371061 None:intergenic
CATTGCAGAAAGAGATGATC+AGG 0.442100 7_4:-57371186 Msa1165470:CDS
GTGCTGCTTTGCAGTCAGAC+AGG 0.445567 7_4:-57369765 Msa1165470:CDS
CATCCAATAGTGTGCGGAAA+GGG 0.446479 7_4:-57372960 Msa1165470:CDS
GGATGTAATTGGAATGTCTT+CGG 0.447416 7_4:+57372978 None:intergenic
ATGATGACCTTGGCAGAGAA+TGG 0.448559 7_4:+57369458 None:intergenic
CCTGAAAACCGAAAGGAGTA+AGG 0.450593 7_4:+57370223 None:intergenic
GTGGTTGCAGCCAGTGGAAG+TGG 0.451041 7_4:-57369517 Msa1165470:CDS
TAGGAATGGTTGGGCCAGAT+AGG 0.452751 7_4:+57370810 None:intergenic
TCCAGCTGTTTATACCTCTC+TGG 0.453194 7_4:-57373148 Msa1165470:CDS
ATGATTCAGCTTTAGGAGTA+GGG 0.458381 7_4:-57373878 Msa1165470:CDS
TTCAATGCTCTGAAGGGTCA+TGG 0.458800 7_4:-57369739 Msa1165470:CDS
GACTATTGCAGTATTTGAAA+GGG 0.459266 7_4:-57369840 Msa1165470:intron
ATTATTGCAAAGATAAAGAA+AGG 0.459801 7_4:-57371608 Msa1165470:CDS
CTCCGTAGCATGGGAGAGCC+AGG 0.460304 7_4:+57371650 None:intergenic
GCAGGTGAAGATCATGATAC+TGG 0.460813 7_4:-57369589 Msa1165470:CDS
TCCTTTGGGAAACAGGTAGA+TGG 0.463374 7_4:-57369645 Msa1165470:CDS
GGAAGAAGAGAAGGGTTGGA+AGG 0.465107 7_4:+57374752 None:intergenic
GGAAGATATATTATACTGAA+TGG 0.466205 7_4:-57371575 Msa1165470:CDS
AGAACATGGGTAGTCTCTCC+TGG 0.466637 7_4:-57371734 Msa1165470:CDS
GCGAAAGCGGGAGGTGGACA+TGG 0.468667 7_4:+57374673 None:intergenic
AGCTCCACCAAAGAAACCTT+TGG 0.469543 7_4:-57373337 Msa1165470:CDS
TCCCCATGGATAAGCAAGAT+AGG 0.469818 7_4:+57369946 None:intergenic
AATTTATCTTCGCACCTTCA+GGG 0.471722 7_4:+57373583 None:intergenic
TACCATCAGGAAGAATTTCA+TGG 0.472908 7_4:+57373637 None:intergenic
TTGCAGAAATACAGGTAGTA+AGG 0.474978 7_4:-57371422 Msa1165470:intron
CACAAGCTTGATCTTCGCTA+TGG 0.475270 7_4:-57372142 Msa1165470:CDS
CAACCTGCTGAAGCACTAGA+AGG 0.477242 7_4:-57372184 Msa1165470:CDS
AATTTCATGGATCCCTAAAC+CGG 0.479707 7_4:+57373650 None:intergenic
GGAACCAAAGGTTTCTTTGG+TGG 0.480140 7_4:+57373333 None:intergenic
CAGAGTATGGGTTGCAGATG+TGG 0.481028 7_4:-57373481 Msa1165470:CDS
TGACTATTGCAGTATTTGAA+AGG 0.483146 7_4:-57369841 Msa1165470:intron
GAGAGGAAGAAGAGAAGGGT+TGG 0.483248 7_4:+57374748 None:intergenic
GAAGAAGAGAAGGGTTGGAA+GGG 0.484033 7_4:+57374753 None:intergenic
ACTGCATTCAAATATACATC+AGG 0.492336 7_4:+57373426 None:intergenic
CATTTGGAGAGCCTCGAACT+TGG 0.492581 7_4:+57371029 None:intergenic
AAAGCCATGGCTATTCTGCC+AGG 0.493450 7_4:-57369684 Msa1165470:CDS
AGCTTGAGTTCTCCGTAGCA+TGG 0.495658 7_4:+57371640 None:intergenic
GGGGAAGAGGATAATAATCC+AGG 0.496456 7_4:-57369928 Msa1165470:CDS
GGAGCCGTTGACGGCTCCAC+CGG 0.497877 7_4:+57374610 None:intergenic
TCCAGAGAGGTATAAACAGC+TGG 0.498640 7_4:+57373147 None:intergenic
CGCCGATAATAGGAATGGTT+GGG 0.499826 7_4:+57370801 None:intergenic
TTGTGGAAGATTTCCAAAGA+AGG 0.500118 7_4:-57373058 Msa1165470:CDS
CTTGCTTATCCATGGGGAAG+AGG 0.500526 7_4:-57369941 Msa1165470:CDS
AAGCCTATCTTGCTTATCCA+TGG 0.501636 7_4:-57369949 Msa1165470:CDS
TCGCCGATAATAGGAATGGT+TGG 0.501910 7_4:+57370800 None:intergenic
TCACCTTCTAGTGCTTCAGC+AGG 0.501916 7_4:+57372181 None:intergenic
ACATCAGGCGACTGAAACAA+AGG 0.502417 7_4:+57373441 None:intergenic
GACATGCATGATGCTTTCCC+TGG 0.504497 7_4:+57369666 None:intergenic
CTTACATGTCAAACAGATCA+AGG 0.506519 7_4:+57371519 None:intergenic
GAAAATGACAATGCAGGAAC+TGG 0.507346 7_4:+57373810 None:intergenic
GAAAGTATCGGCGGTGGCGG+AGG 0.507654 7_4:+57374580 None:intergenic
GGAGTCACATCTTCAGATCC+AGG 0.507797 7_4:+57371716 None:intergenic
TGATGACCTTGGCAGAGAAT+GGG 0.508282 7_4:+57369459 None:intergenic
CTGCCGTGGAAGAAGTTATC+CGG 0.508694 7_4:-57370472 Msa1165470:CDS
AATTGGAATGTCTTCGGCAA+GGG 0.512994 7_4:+57372984 None:intergenic
GGGTTGGAAGGGAACGATGA+TGG 0.513085 7_4:+57374764 None:intergenic
ATTCATCCTTCAGCAAATCC+TGG 0.513530 7_4:+57373253 None:intergenic
GAATAGCCATGGCTTTCATA+AGG 0.514315 7_4:+57369691 None:intergenic
GGCGGTGGCGGAGGAAGAAA+CGG 0.519648 7_4:+57374589 None:intergenic
TGTTTGGTTTGGTCTTACCC+TGG 0.521641 7_4:-57371079 Msa1165470:CDS
TTATTGCAAAGATAAAGAAA+GGG 0.522628 7_4:-57371607 Msa1165470:CDS
TCCACTGAAGACGGCGCCGG+TGG 0.524227 7_4:-57374626 Msa1165470:CDS
GGAGCGAGAGGAAGAAGAGA+AGG 0.525317 7_4:+57374743 None:intergenic
GGAAGAAACGGAGCCGTTGA+CGG 0.527449 7_4:+57374601 None:intergenic
GTCTCCACTGAAGACGGCGC+CGG 0.530072 7_4:-57374629 Msa1165470:CDS
ACGAATCTGGGAGAGTGATA+AGG 0.530372 7_4:-57371398 Msa1165470:CDS
GAGCGAGAGGAAGAAGAGAA+GGG 0.533453 7_4:+57374744 None:intergenic
ATCAGGTATCAAAGAAAAGA+CGG 0.533863 7_4:-57371169 Msa1165470:CDS
GAAGATGTATACTCTGATCC+TGG 0.534080 7_4:-57371668 Msa1165470:CDS
AGGTAGTAAGGAACGAATCT+GGG 0.534241 7_4:-57371410 Msa1165470:CDS
TAACCGTGTATCTCAACCTC+AGG 0.535508 7_4:+57373606 None:intergenic
AGCAAGGCCGGAGGAAAAGT+TGG 0.536064 7_4:-57373727 Msa1165470:CDS
GATGCTGCTAGCCAAGTTCG+AGG 0.536673 7_4:-57371040 Msa1165470:CDS
TTTGAAAGGGATAATCCCCT+TGG 0.537342 7_4:-57369827 Msa1165470:CDS
TGGAAGAAGTTATCCGGCGT+GGG 0.537418 7_4:-57370466 Msa1165470:CDS
AGGCCGGAGGAAAAGTTGGC+TGG 0.537462 7_4:-57373723 Msa1165470:CDS
TCCAGGAACATTAACCATGC+AGG 0.538098 7_4:-57369911 Msa1165470:intron
ATGTACTTCTCATCTGGAGA+AGG 0.539513 7_4:+57373123 None:intergenic
TCAGGTATCAAAGAAAAGAC+GGG 0.540145 7_4:-57371168 Msa1165470:CDS
AGGAAACGCGGAGGAGCGAG+AGG 0.540689 7_4:+57374731 None:intergenic
TTGATGGATACTGCAATTCA+AGG 0.541115 7_4:-57373692 Msa1165470:CDS
CCAAAGAAAATAGCTGTTGG+TGG 0.541622 7_4:-57370342 Msa1165470:CDS
ATCCATGAAATTCTTCCTGA+TGG 0.542749 7_4:-57373639 Msa1165470:CDS
CTTCAGCATTCGTGTGAATG+AGG 0.543585 7_4:-57373526 Msa1165470:CDS
GTAGAAAGTATCGGCGGTGG+CGG 0.543658 7_4:+57374577 None:intergenic
GTCTGTTGTTGCTCTAATGT+CGG 0.544230 7_4:-57371362 Msa1165470:CDS
CTTCTGAAGATCGATCGAAT+AGG 0.544867 7_4:+57371687 None:intergenic
AGCCTATCTTGCTTATCCAT+GGG 0.545230 7_4:-57369948 Msa1165470:CDS
TCATGGTGCTCTAAGTCGGC+TGG 0.546433 7_4:-57369722 Msa1165470:CDS
TGTTCCTCCACCTGTGATCA+GGG 0.547665 7_4:-57373850 Msa1165470:CDS
AGGTGCTAAATGGCGAAAGC+GGG 0.548042 7_4:+57374661 None:intergenic
GATTATTATCCTCTTCCCCA+TGG 0.552898 7_4:+57369932 None:intergenic
GTCAAAGAAAATATTAGCAA+AGG 0.552992 7_4:-57369562 Msa1165470:CDS
GGCGCCGGTGGAGCCGTCAA+CGG 0.553933 7_4:-57374614 Msa1165470:CDS
GGAAGTGGTGCAACACCAGA+AGG 0.554759 7_4:-57371554 Msa1165470:CDS
ATCCTGGCTCTCCCATGCTA+CGG 0.554759 7_4:-57371652 Msa1165470:CDS
CTCATTCACACGAATGCTGA+AGG 0.555075 7_4:+57373527 None:intergenic
AATGATGCAAGCTGAGGGTA+TGG 0.556434 7_4:+57371205 None:intergenic
AAATTCCTCTCTTACCTGCA+TGG 0.559489 7_4:+57369897 None:intergenic
TGCACCATTCCATCAACTCG+TGG 0.559943 7_4:-57373360 Msa1165470:CDS
GTGTCAAATACTTCCGATGC+AGG 0.559991 7_4:-57369607 Msa1165470:CDS
ACTGACTGAATTAGCAAGGC+CGG 0.560409 7_4:-57373739 Msa1165470:CDS
ACCATTCCTATTATCGGCGA+GGG 0.560652 7_4:-57370797 Msa1165470:CDS
ATCATGATCTTCACCTGCAT+CGG 0.560762 7_4:+57369594 None:intergenic
TATATTATACTGAATGGAAG+TGG 0.560960 7_4:-57371569 Msa1165470:CDS
TCAGGTCCTAGTGTACCATC+AGG 0.560994 7_4:+57373624 None:intergenic
AGTTGGCAGCGGTTCTGCGA+CGG 0.561939 7_4:+57374702 None:intergenic
GCTTGAGTTCTCCGTAGCAT+GGG 0.562122 7_4:+57371641 None:intergenic
TCAACGATGTCCCTGATCAC+AGG 0.562578 7_4:+57373840 None:intergenic
TACTAGTAAACTCAGAGTAT+GGG 0.565599 7_4:-57373493 Msa1165470:CDS
AGACGGAGGTGATGCAAAAG+TGG 0.567125 7_4:-57372236 Msa1165470:CDS
CATGGAGGCGAAGTTGGCAG+CGG 0.568057 7_4:+57374691 None:intergenic
AACATTCCAGGATTTGCTGA+AGG 0.568306 7_4:-57373259 Msa1165470:CDS
TTGGCTAAAGTAAGACTCCA+AGG 0.568591 7_4:+57369810 None:intergenic
AATGGTGAAAATGACAATGC+AGG 0.568762 7_4:+57373804 None:intergenic
GCTGTTGGTGGACATTCCTA+TGG 0.571097 7_4:-57370330 Msa1165470:CDS
ACAAGCTTGATCTTCGCTAT+GGG 0.571598 7_4:-57372141 Msa1165470:intron
TTATGATTGATTCAATGCAT+AGG 0.573141 7_4:-57373101 Msa1165470:CDS
ATGCTACGGAGAACTCAAGC+TGG 0.573359 7_4:-57371638 Msa1165470:CDS
GCAAGCTGAGGGTATGGATG+AGG 0.573988 7_4:+57371211 None:intergenic
CTAATGTCGGATCAAGAAGA+AGG 0.574175 7_4:-57371349 Msa1165470:CDS
CGGTTCTGCGACGGAGAGTG+AGG 0.574207 7_4:+57374711 None:intergenic
TTTGGCCCACCAGGAACCAA+AGG 0.575186 7_4:+57373321 None:intergenic
AGCAAAGTGGTTGCAGCCAG+TGG 0.576467 7_4:-57369523 Msa1165470:CDS
TGCAAGTGCAGAGGCTGCCG+TGG 0.576961 7_4:-57370486 Msa1165470:CDS
AGGGGCATGTGCCAGAAGGT+TGG 0.577125 7_4:+57370293 None:intergenic
TCAAGCTTGTGTAATATCAC+CGG 0.578428 7_4:+57372154 None:intergenic
GTGGAAGAAGTTATCCGGCG+TGG 0.579269 7_4:-57370467 Msa1165470:CDS
ATTCTTCCTGATGGTACACT+AGG 0.579690 7_4:-57373630 Msa1165470:CDS
AGGGTCATGGTGCTCTAAGT+CGG 0.580401 7_4:-57369726 Msa1165470:CDS
CTTTGCTCTTAAATTCTCCA+GGG 0.584326 7_4:+57371062 None:intergenic
TTCTGCAATGATGCAAGCTG+AGG 0.585378 7_4:+57371199 None:intergenic
GGGTAAGACCAAACCAAACA+TGG 0.586048 7_4:+57371082 None:intergenic
TCCACCGGCGCCGTCTTCAG+TGG 0.590068 7_4:+57374625 None:intergenic
ACATCCAATAGTGTGCGGAA+AGG 0.590918 7_4:-57372961 Msa1165470:CDS
ACGCCGGATAACTTCTTCCA+CGG 0.591233 7_4:+57370469 None:intergenic
AAACAAGGCGAATAAGAACA+TGG 0.592184 7_4:-57371748 Msa1165470:CDS
TAATTGGAATGTCTTCGGCA+AGG 0.592215 7_4:+57372983 None:intergenic
AGCACTAGAAGGTGAACAGC+CGG 0.592501 7_4:-57372173 Msa1165470:CDS
TGCTAAATGGCGAAAGCGGG+AGG 0.593580 7_4:+57374664 None:intergenic
AAGAATCCCATTCTCTGCCA+AGG 0.595399 7_4:-57369465 Msa1165470:CDS
TGGCTAAAGTAAGACTCCAA+GGG 0.595706 7_4:+57369811 None:intergenic
TGTACTTCTCATCTGGAGAA+GGG 0.596924 7_4:+57373124 None:intergenic
GCTCTCCAAATGAATTTGCA+GGG 0.598282 7_4:-57371018 Msa1165470:CDS
AAGAAACCTTTGGTTCCTGG+TGG 0.598314 7_4:-57373327 Msa1165470:CDS
ATGTCCCTGATCACAGGTGG+AGG 0.598649 7_4:+57373846 None:intergenic
TATCGGCGAGGGTGAAGTAG+AGG 0.599867 7_4:-57370786 Msa1165470:CDS
CAAGCTGAGGGTATGGATGA+GGG 0.601512 7_4:+57371212 None:intergenic
GCCACATTATACTTGCCACC+TGG 0.601817 7_4:-57371133 Msa1165470:CDS
GCAATTAGTTGCAAGTGCAG+AGG 0.602770 7_4:-57370495 Msa1165470:CDS
CATCCAAAGAAAATAGCTGT+TGG 0.603268 7_4:-57370345 Msa1165470:CDS
ATCTTTAGATGGTACTACAA+AGG 0.605083 7_4:-57373181 Msa1165470:CDS
CTGAAAACCGAAAGGAGTAA+GGG 0.605352 7_4:+57370224 None:intergenic
GATGAGGGGCATGTGCCAGA+AGG 0.606367 7_4:+57370289 None:intergenic
GGCAGTCATGAATGCACCAT+AGG 0.606609 7_4:+57370314 None:intergenic
ATTGGAATGTCTTCGGCAAG+GGG 0.607891 7_4:+57372985 None:intergenic
TTTCCCTGGCAGAATAGCCA+TGG 0.608023 7_4:+57369680 None:intergenic
TAAATGGCGAAAGCGGGAGG+TGG 0.609491 7_4:+57374667 None:intergenic
CAGCCAAAGAAGGGCTGACG+TGG 0.610071 7_4:+57370988 None:intergenic
GGCCTTGCTAATTCAGTCAG+TGG 0.610175 7_4:+57373741 None:intergenic
GGAGAGTGGAGCGATGCCGA+TGG 0.610352 7_4:+57374801 None:intergenic
TTCGTAATCGTAGAAAGTAT+CGG 0.612481 7_4:+57374568 None:intergenic
GAGATACACGGTTACCCTGA+AGG 0.612554 7_4:-57373597 Msa1165470:CDS
ACCCTCGCCGATAATAGGAA+TGG 0.613412 7_4:+57370796 None:intergenic
TGCTACGGAGAACTCAAGCT+GGG 0.613517 7_4:-57371637 Msa1165470:CDS
TTCTTTGGAAATCTTCCACA+AGG 0.616835 7_4:+57373060 None:intergenic
AGAAACCTTTGGTTCCTGGT+GGG 0.619335 7_4:-57373326 Msa1165470:CDS
AACCATTCCTATTATCGGCG+AGG 0.620784 7_4:-57370798 Msa1165470:CDS
CTCTGCCAAGGTCATCATTG+TGG 0.622722 7_4:-57369453 Msa1165470:CDS
ATGTCAAACAGATCAAGGAA+TGG 0.625170 7_4:+57371524 None:intergenic
GTAGAGTTATGGAGTGCCGA+TGG 0.625317 7_4:-57373036 Msa1165470:CDS
AAAGCGGGAGGTGGACATGG+AGG 0.626615 7_4:+57374676 None:intergenic
CTCCACTGACTGAATTAGCA+AGG 0.626819 7_4:-57373743 Msa1165470:CDS
ATCGTAGAAAGTATCGGCGG+TGG 0.627429 7_4:+57374574 None:intergenic
TCTGCAATGATGCAAGCTGA+GGG 0.627483 7_4:+57371200 None:intergenic
GCCATCTACCTGTTTCCCAA+AGG 0.629718 7_4:+57369644 None:intergenic
GACCAAACCAAACATGGCAA+AGG 0.629767 7_4:+57371088 None:intergenic
ACTGCTGTCTCCACTGAAGA+CGG 0.630271 7_4:-57374635 Msa1165470:CDS
TATTGCAAAGATAAAGAAAG+GGG 0.630329 7_4:-57371606 Msa1165470:CDS
TGCCGATGGAAAATTTGTCA+GGG 0.632234 7_4:-57373022 Msa1165470:CDS
GGTTACCACAATGATGACCT+TGG 0.633949 7_4:+57369448 None:intergenic
AATGACAATGCAGGAACTGG+CGG 0.634984 7_4:+57373813 None:intergenic
ACGAATCTTGGTATAAAACA+AGG 0.635100 7_4:-57371763 Msa1165470:CDS
GGCTAAAGTAAGACTCCAAG+GGG 0.635112 7_4:+57369812 None:intergenic
GAGGTGCTAAATGGCGAAAG+CGG 0.635693 7_4:+57374660 None:intergenic
GATCGATCGAATAGGATGCG+TGG 0.639019 7_4:+57371695 None:intergenic
GGGTTGCAGATGTGGAAACA+GGG 0.639948 7_4:-57373473 Msa1165470:CDS
TCAGTGGAGACAGCAGTGAG+AGG 0.642945 7_4:+57374641 None:intergenic
AGCTCCACGAGTTGATGGAA+TGG 0.642993 7_4:+57373356 None:intergenic
AATAAAAGCTTACCCCACGC+CGG 0.643004 7_4:+57370453 None:intergenic
GATACTTTCTACGATTACGA+AGG 0.643647 7_4:-57374566 Msa1165470:intron
GGATACACAAACTATACCAT+CGG 0.646424 7_4:-57374817 Msa1165470:CDS
AAGCCATGGCTATTCTGCCA+GGG 0.646990 7_4:-57369683 Msa1165470:CDS
ACCAGGTGGCAAGTATAATG+TGG 0.650824 7_4:+57371132 None:intergenic
GGTAGTACCTGAAAACCGAA+AGG 0.650995 7_4:+57370216 None:intergenic
GAAGTGGTGCAACACCAGAA+GGG 0.651059 7_4:-57371553 Msa1165470:CDS
CGACGGAGAGTGAGGAAACG+CGG 0.652672 7_4:+57374719 None:intergenic
ACGATGTCCCTGATCACAGG+TGG 0.652850 7_4:+57373843 None:intergenic
TGATGGTACACTAGGACCTG+AGG 0.655303 7_4:-57373622 Msa1165470:CDS
CAGCATTCGTGTGAATGAGG+AGG 0.655496 7_4:-57373523 Msa1165470:CDS
GGACCTGAGGTTGAGATACA+CGG 0.656503 7_4:-57373609 Msa1165470:CDS
AACAAGGCGAATAAGAACAT+GGG 0.658049 7_4:-57371747 Msa1165470:CDS
AGTCGCATGTCATTCTACAC+CGG 0.658779 7_4:-57373669 Msa1165470:CDS
GCCTATCTTGCTTATCCATG+GGG 0.662327 7_4:-57369947 Msa1165470:CDS
CAGGTATCAAAGAAAAGACG+GGG 0.665680 7_4:-57371167 Msa1165470:CDS
CAATTACATCCAATAGTGTG+CGG 0.671738 7_4:-57372966 Msa1165470:CDS
TCTGTTGATGGATTGTAACC+AGG 0.671747 7_4:+57371115 None:intergenic
AGAGAGGTATAAACAGCTGG+AGG 0.671888 7_4:+57373150 None:intergenic
CTTGCTAATTCAGTCAGTGG+AGG 0.677968 7_4:+57373744 None:intergenic
GGAAGAAGTTATCCGGCGTG+GGG 0.679866 7_4:-57370465 Msa1165470:intron
AGATGCTAAAACAAGCTGAG+AGG 0.680936 7_4:+57373200 None:intergenic
GGTTACAATCCATCAACAGA+CGG 0.682155 7_4:-57371112 Msa1165470:CDS
TGCAGATGCTGAAAGCAAAG+TGG 0.682448 7_4:-57369536 Msa1165470:CDS
GACTGAATTAGCAAGGCCGG+AGG 0.685598 7_4:-57373736 Msa1165470:CDS
CGGAGAGTGAGGAAACGCGG+AGG 0.690767 7_4:+57374722 None:intergenic
TGAAGACAGAACTCTTTGGG+AGG 0.699548 7_4:-57370025 Msa1165470:CDS
ATTCTGCCTTATGAAAGCCA+TGG 0.703288 7_4:-57369697 Msa1165470:CDS
TCTAGGGTAGAAACTCAAGA+CGG 0.706858 7_4:-57372253 Msa1165470:intron
ATTGCAAAGATAAAGAAAGG+GGG 0.711082 7_4:-57371605 Msa1165470:CDS
ATCTGGAGAAGGGTCCAGAG+AGG 0.721369 7_4:+57373134 None:intergenic
AGGGTAGAAACTCAAGACGG+AGG 0.724058 7_4:-57372250 Msa1165470:CDS
TGTGAGTAGATTATATCACG+AGG 0.743851 7_4:+57372205 None:intergenic
GTTGATGGATTGTAACCAGG+TGG 0.752017 7_4:+57371118 None:intergenic
GTAATCGTAGAAAGTATCGG+CGG 0.776533 7_4:+57374571 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATATAAATTAAAAACT+TGG + chr7_4:57371442-57371461 None:intergenic 10.0%
!!! TTTTAATTTATATTTCTTCT+TGG - chr7_4:57371445-57371464 Msa1165470:intron 10.0%
!!! TTTAATTTATATTTCTTCTT+GGG - chr7_4:57371446-57371465 Msa1165470:intron 10.0%
!! AAAATACTATACAAAGAAAA+TGG + chr7_4:57369844-57369863 None:intergenic 15.0%
!!! AAAATAATTTTGTCTCTAAA+TGG + chr7_4:57370538-57370557 None:intergenic 15.0%
!! CAAAAAAATATAAAAATGCA+AGG + chr7_4:57371983-57372002 None:intergenic 15.0%
!! CCAACTAATAAAATTATATT+GGG + chr7_4:57373057-57373076 None:intergenic 15.0%
!!! ATATTTTGTATTAAATTAGC+TGG - chr7_4:57373450-57373469 Msa1165470:CDS 15.0%
!! AAAATTGAGTTTCAAATATT+TGG - chr7_4:57373678-57373697 Msa1165470:CDS 15.0%
!! TAATAGCTGATTATTAATTA+TGG + chr7_4:57373772-57373791 None:intergenic 15.0%
!!! ATTTCTAAAAGACATTTATA+AGG + chr7_4:57374237-57374256 None:intergenic 15.0%
!!! AATTTTATCAATCAATGATG+CGG - chr7_4:57369483-57369502 Msa1165470:CDS 20.0%
!! TGATGTAGTATTTGATTAAT+TGG - chr7_4:57370047-57370066 Msa1165470:intron 20.0%
!!! AGTTTTTGAAAACTATGTTT+GGG - chr7_4:57370915-57370934 Msa1165470:intron 20.0%
!! TTCATTATTAAAACACTCTT+GGG + chr7_4:57371646-57371665 None:intergenic 20.0%
!!! TTTTAAAATTGCTTCATTTG+AGG - chr7_4:57372043-57372062 Msa1165470:intron 20.0%
!! TAGCATAGAATATTTGAAAA+TGG + chr7_4:57372323-57372342 None:intergenic 20.0%
!! ATTATTGCAAAGATAAAGAA+AGG - chr7_4:57372713-57372732 Msa1165470:intron 20.0%
!! TTATTGCAAAGATAAAGAAA+GGG - chr7_4:57372714-57372733 Msa1165470:intron 20.0%
!!! TGTCTTAAATCACTTTTTTT+CGG - chr7_4:57372825-57372844 Msa1165470:intron 20.0%
!!! CCCAATATAATTTTATTAGT+TGG - chr7_4:57373054-57373073 Msa1165470:CDS 20.0%
!! GCCAACTAATAAAATTATAT+TGG + chr7_4:57373058-57373077 None:intergenic 20.0%
!!! ACCTGAATTATTTTTTTATC+TGG + chr7_4:57373080-57373099 None:intergenic 20.0%
!! TAATACAAAATATACTGAAC+CGG + chr7_4:57373443-57373462 None:intergenic 20.0%
!! AATAGAAATTGAACTATCAT+AGG + chr7_4:57374129-57374148 None:intergenic 20.0%
!! TTCAATTTCTATTATTCCAA+TGG - chr7_4:57374136-57374155 Msa1165470:intron 20.0%
!!! TTGTTGACTTTTTAGTTACA+TGG + chr7_4:57369953-57369972 None:intergenic 25.0%
! TACACTGTAAGTAAAAACAA+AGG + chr7_4:57370084-57370103 None:intergenic 25.0%
! TTTATGAAAATAAGCTGAAC+AGG - chr7_4:57370167-57370186 Msa1165470:intron 25.0%
! TACTAAATCTAAAAACTGCA+AGG + chr7_4:57370317-57370336 None:intergenic 25.0%
!!! ATTTAGTATTTTTGAGCTTC+TGG - chr7_4:57370329-57370348 Msa1165470:CDS 25.0%
!! CGAAGATAAATTTTGTTACT+TGG - chr7_4:57370749-57370768 Msa1165470:intron 25.0%
!!! CAGTTTTTGAAAACTATGTT+TGG - chr7_4:57370914-57370933 Msa1165470:intron 25.0%
!! TGCTCATTAGATTGAATTTT+TGG + chr7_4:57371021-57371040 None:intergenic 25.0%
!! TTATGATTGATTCAATGCAT+AGG - chr7_4:57371220-57371239 Msa1165470:CDS 25.0%
! CTTCATTATTAAAACACTCT+TGG + chr7_4:57371647-57371666 None:intergenic 25.0%
!!! GTTTTAATAATGAAGTTCAC+TGG - chr7_4:57371652-57371671 Msa1165470:CDS 25.0%
!! AGTTTTTATGAGCAATCATT+CGG - chr7_4:57371698-57371717 Msa1165470:CDS 25.0%
! TTTCATGGAATATTATGGTT+AGG - chr7_4:57371777-57371796 Msa1165470:CDS 25.0%
!!! AGAATAAGCTGTTTTAGAAA+AGG + chr7_4:57372227-57372246 None:intergenic 25.0%
! TATTGCAAAGATAAAGAAAG+GGG - chr7_4:57372715-57372734 Msa1165470:intron 25.0%
! GGAAGATATATTATACTGAA+TGG - chr7_4:57372746-57372765 Msa1165470:intron 25.0%
! TATATTATACTGAATGGAAG+TGG - chr7_4:57372752-57372771 Msa1165470:intron 25.0%
! GCCAGATAAAAAAATAATTC+AGG - chr7_4:57373076-57373095 Msa1165470:CDS 25.0%
!!! ACTCAATTTTGAAGAGAAAT+GGG + chr7_4:57373668-57373687 None:intergenic 25.0%
!!! AACTCAATTTTGAAGAGAAA+TGG + chr7_4:57373669-57373688 None:intergenic 25.0%
!!! AGTTTGAATCGAACATTTTT+TGG - chr7_4:57373934-57373953 Msa1165470:intron 25.0%
!! ATTTTATTAGCCGACATAAA+AGG + chr7_4:57374348-57374367 None:intergenic 25.0%
! GTCAAAGAAAATATTAGCAA+AGG - chr7_4:57374759-57374778 Msa1165470:CDS 25.0%
! TTCGTAATCGTAGAAAGTAT+CGG + chr7_4:57369756-57369775 None:intergenic 30.0%
TGCAATAAACAGTTAACTAG+CGG + chr7_4:57369804-57369823 None:intergenic 30.0%
! GTATAGTATTTTCCATTTCG+CGG - chr7_4:57369852-57369871 Msa1165470:intron 30.0%
TCAAATAAGCTTATCCAAAC+TGG - chr7_4:57370263-57370282 Msa1165470:CDS 30.0%
! CTAACAGCTACTTTAATGTT+TGG - chr7_4:57370368-57370387 Msa1165470:intron 30.0%
ATGTTAGATGATTCAGCTTT+AGG - chr7_4:57370436-57370455 Msa1165470:intron 30.0%
ATACTAGTAAACTCAGAGTA+TGG - chr7_4:57370827-57370846 Msa1165470:intron 30.0%
TACTAGTAAACTCAGAGTAT+GGG - chr7_4:57370828-57370847 Msa1165470:intron 30.0%
ACTGCATTCAAATATACATC+AGG + chr7_4:57370898-57370917 None:intergenic 30.0%
TATTCAAGTAAGAACATTCC+AGG - chr7_4:57371050-57371069 Msa1165470:CDS 30.0%
!!! CTTGTTTTAGCATCTTTAGA+TGG - chr7_4:57371129-57371148 Msa1165470:CDS 30.0%
ATCTTTAGATGGTACTACAA+AGG - chr7_4:57371140-57371159 Msa1165470:CDS 30.0%
ATCATAATGTACTTCTCATC+TGG + chr7_4:57371207-57371226 None:intergenic 30.0%
CAAGGTACAATAAAAGAGTA+TGG + chr7_4:57371246-57371265 None:intergenic 30.0%
! TACTCTTTTATTGTACCTTG+TGG - chr7_4:57371246-57371265 Msa1165470:CDS 30.0%
! GTTTTTATGAGCAATCATTC+GGG - chr7_4:57371699-57371718 Msa1165470:CDS 30.0%
!! GCTGTTTTCATGGAATATTA+TGG - chr7_4:57371772-57371791 Msa1165470:CDS 30.0%
! TTACCATTCTTTTCTTCGAT+TGG - chr7_4:57371832-57371851 Msa1165470:intron 30.0%
! TCATTTTCTTCCCTCTTTTA+TGG - chr7_4:57371859-57371878 Msa1165470:intron 30.0%
CAAAAACTGACCATAAAAGA+GGG + chr7_4:57371872-57371891 None:intergenic 30.0%
ATTTGAAAATGGTCAAGACT+TGG + chr7_4:57372312-57372331 None:intergenic 30.0%
ATGATGATCAAGCATGTAAA+TGG + chr7_4:57372368-57372387 None:intergenic 30.0%
ACGAATCTTGGTATAAAACA+AGG - chr7_4:57372558-57372577 Msa1165470:intron 30.0%
ATTGCAAAGATAAAGAAAGG+GGG - chr7_4:57372716-57372735 Msa1165470:intron 30.0%
GTATAAATGAAAATCTGCGA+GGG + chr7_4:57372857-57372876 None:intergenic 30.0%
AGTATAAATGAAAATCTGCG+AGG + chr7_4:57372858-57372877 None:intergenic 30.0%
! GCAGATTTTCATTTATACTC+TGG - chr7_4:57372859-57372878 Msa1165470:intron 30.0%
! GATTTTCATTTATACTCTGG+TGG - chr7_4:57372862-57372881 Msa1165470:intron 30.0%
AAGGAGATTTACAGTTAGAT+AGG - chr7_4:57372991-57373010 Msa1165470:CDS 30.0%
ATCAGGTATCAAAGAAAAGA+CGG - chr7_4:57373152-57373171 Msa1165470:CDS 30.0%
TTCCACAACAAAAAAGATGA+GGG + chr7_4:57374050-57374069 None:intergenic 30.0%
ATTCCACAACAAAAAAGATG+AGG + chr7_4:57374051-57374070 None:intergenic 30.0%
AGAAAATTTATGGAAGCCAT+TGG + chr7_4:57374155-57374174 None:intergenic 30.0%
GTGAAGCACAAGAAAATTTA+TGG + chr7_4:57374165-57374184 None:intergenic 30.0%
ATCCAAAAATAAGGTGTGAA+AGG + chr7_4:57374203-57374222 None:intergenic 30.0%
CTTCATTCTACAGAAGAAAA+TGG + chr7_4:57374281-57374300 None:intergenic 30.0%
CATCTCTACATAAGTATTAG+TGG + chr7_4:57374322-57374341 None:intergenic 30.0%
TGACTATTGCAGTATTTGAA+AGG - chr7_4:57374480-57374499 Msa1165470:intron 30.0%
GACTATTGCAGTATTTGAAA+GGG - chr7_4:57374481-57374500 Msa1165470:intron 30.0%
GGATACACAAACTATACCAT+CGG - chr7_4:57369504-57369523 Msa1165470:CDS 35.0%
! ATGATGGTGAAGAAAAAGAG+AGG + chr7_4:57369544-57369563 None:intergenic 35.0%
GATACTTTCTACGATTACGA+AGG - chr7_4:57369755-57369774 Msa1165470:CDS 35.0%
AAAATAAGCTGAACAGGTCA+TGG - chr7_4:57370173-57370192 Msa1165470:intron 35.0%
CTTGAGCACATAAAGACTAA+GGG + chr7_4:57370289-57370308 None:intergenic 35.0%
!! ATGATTCAGCTTTAGGAGTA+GGG - chr7_4:57370443-57370462 Msa1165470:intron 35.0%
AATGGTGAAAATGACAATGC+AGG + chr7_4:57370520-57370539 None:intergenic 35.0%
! TTGATGGATACTGCAATTCA+AGG - chr7_4:57370629-57370648 Msa1165470:intron 35.0%
AATTTCATGGATCCCTAAAC+CGG + chr7_4:57370674-57370693 None:intergenic 35.0%
ATCCATGAAATTCTTCCTGA+TGG - chr7_4:57370682-57370701 Msa1165470:intron 35.0%
TACCATCAGGAAGAATTTCA+TGG + chr7_4:57370687-57370706 None:intergenic 35.0%
AATTTATCTTCGCACCTTCA+GGG + chr7_4:57370741-57370760 None:intergenic 35.0%
AAATTTATCTTCGCACCTTC+AGG + chr7_4:57370742-57370761 None:intergenic 35.0%
! GATGGTACTACAAAGGATTT+TGG - chr7_4:57371147-57371166 Msa1165470:CDS 35.0%
! TTCTTTGGAAATCTTCCACA+AGG + chr7_4:57371264-57371283 None:intergenic 35.0%
TTGTGGAAGATTTCCAAAGA+AGG - chr7_4:57371263-57371282 Msa1165470:CDS 35.0%
TTCCAAAGAAGGTAGAGTTA+TGG - chr7_4:57371274-57371293 Msa1165470:CDS 35.0%
GGATGTAATTGGAATGTCTT+CGG + chr7_4:57371346-57371365 None:intergenic 35.0%
CAATTACATCCAATAGTGTG+CGG - chr7_4:57371355-57371374 Msa1165470:CDS 35.0%
AAGGGATGCGTTCTATTAAT+TGG - chr7_4:57371379-57371398 Msa1165470:CDS 35.0%
ATGTATCCATACGCAAGATT+TGG - chr7_4:57371747-57371766 Msa1165470:CDS 35.0%
TGTATCCATACGCAAGATTT+GGG - chr7_4:57371748-57371767 Msa1165470:CDS 35.0%
AAGCCAATCGAAGAAAAGAA+TGG + chr7_4:57371838-57371857 None:intergenic 35.0%
CCAAAAACTGACCATAAAAG+AGG + chr7_4:57371873-57371892 None:intergenic 35.0%
! CCTCTTTTATGGTCAGTTTT+TGG - chr7_4:57371870-57371889 Msa1165470:intron 35.0%
TGTGAGTAGATTATATCACG+AGG + chr7_4:57372119-57372138 None:intergenic 35.0%
TCAAGCTTGTGTAATATCAC+CGG + chr7_4:57372170-57372189 None:intergenic 35.0%
TGGGTATGGATACAAATTCT+CGG - chr7_4:57372199-57372218 Msa1165470:CDS 35.0%
TGATCATCATGACCAACAAT+TGG - chr7_4:57372378-57372397 Msa1165470:intron 35.0%
TATATAGCTCCTGTTAGGAT+AGG - chr7_4:57372451-57372470 Msa1165470:intron 35.0%
ATATAGCTCCTGTTAGGATA+GGG - chr7_4:57372452-57372471 Msa1165470:intron 35.0%
!! CTTGTTTTCTGTATCTACAG+AGG - chr7_4:57372500-57372519 Msa1165470:intron 35.0%
GTATCTACAGAGGAATTTCT+TGG - chr7_4:57372510-57372529 Msa1165470:intron 35.0%
! TGGCTTTTGTATACGAATCT+TGG - chr7_4:57372546-57372565 Msa1165470:intron 35.0%
AAACAAGGCGAATAAGAACA+TGG - chr7_4:57372573-57372592 Msa1165470:intron 35.0%
AACAAGGCGAATAAGAACAT+GGG - chr7_4:57372574-57372593 Msa1165470:intron 35.0%
ATGTCAAACAGATCAAGGAA+TGG + chr7_4:57372800-57372819 None:intergenic 35.0%
CTTACATGTCAAACAGATCA+AGG + chr7_4:57372805-57372824 None:intergenic 35.0%
TCATTTATACTCTGGTGGTT+TGG - chr7_4:57372867-57372886 Msa1165470:intron 35.0%
!! CCTGTATTTCTGCAACATTT+TGG + chr7_4:57372894-57372913 None:intergenic 35.0%
CCAAAATGTTGCAGAAATAC+AGG - chr7_4:57372891-57372910 Msa1165470:intron 35.0%
TTGCAGAAATACAGGTAGTA+AGG - chr7_4:57372899-57372918 Msa1165470:intron 35.0%
TCAGGTATCAAAGAAAAGAC+GGG - chr7_4:57373153-57373172 Msa1165470:CDS 35.0%
CTTTGCTCTTAAATTCTCCA+GGG + chr7_4:57373262-57373281 None:intergenic 35.0%
TCTTTGCTCTTAAATTCTCC+AGG + chr7_4:57373263-57373282 None:intergenic 35.0%
!! CTGTTTGGCTCTAGATAATT+AGG - chr7_4:57373392-57373411 Msa1165470:CDS 35.0%
TTTACTTAGTTCCTCTGTTC+CGG - chr7_4:57373421-57373440 Msa1165470:CDS 35.0%
! TTGATGACTTTAAGTAGTGC+AGG - chr7_4:57373480-57373499 Msa1165470:CDS 35.0%
GAAGATAAGGAGATTTCTCT+AGG + chr7_4:57373642-57373661 None:intergenic 35.0%
AACTAATTGCTCTACATAGC+TGG + chr7_4:57373816-57373835 None:intergenic 35.0%
CATCCAAAGAAAATAGCTGT+TGG - chr7_4:57373976-57373995 Msa1165470:intron 35.0%
TCCACAACAAAAAAGATGAG+GGG + chr7_4:57374049-57374068 None:intergenic 35.0%
AGGTGTGAAAGGAGATTAAA+AGG + chr7_4:57374192-57374211 None:intergenic 35.0%
!!! CTCCTTTCACACCTTATTTT+TGG - chr7_4:57374198-57374217 Msa1165470:intron 35.0%
!!! CACCTTATTTTTGGATTGAC+TGG - chr7_4:57374207-57374226 Msa1165470:intron 35.0%
TGCCAGTCAATCCAAAAATA+AGG + chr7_4:57374212-57374231 None:intergenic 35.0%
AGAATGAAGACAGAACTCTT+TGG - chr7_4:57374292-57374311 Msa1165470:intron 35.0%
GAATGAAGACAGAACTCTTT+GGG - chr7_4:57374293-57374312 Msa1165470:intron 35.0%
! AGAGATGAGTCCTTTTATGT+CGG - chr7_4:57374335-57374354 Msa1165470:intron 35.0%
ATTTACAAGAACAGTAGACG+TGG + chr7_4:57374450-57374469 None:intergenic 35.0%
!! AGGTTTTTCAATGCTCTGAA+GGG - chr7_4:57374576-57374595 Msa1165470:CDS 35.0%
TGAAGAAAAAGAGAGGAGAG+TGG + chr7_4:57369537-57369556 None:intergenic 40.0%
!! GTAATCGTAGAAAGTATCGG+CGG + chr7_4:57369753-57369772 None:intergenic 40.0%
ATAAAGACTAAGGGCCAGTT+TGG + chr7_4:57370280-57370299 None:intergenic 40.0%
CCTTGAGCACATAAAGACTA+AGG + chr7_4:57370290-57370309 None:intergenic 40.0%
! CCTTAGTCTTTATGTGCTCA+AGG - chr7_4:57370287-57370306 Msa1165470:CDS 40.0%
!! GATGATTCAGCTTTAGGAGT+AGG - chr7_4:57370442-57370461 Msa1165470:intron 40.0%
GAAAATGACAATGCAGGAAC+TGG + chr7_4:57370514-57370533 None:intergenic 40.0%
!! TTGGCTGGTTTACGTATTGA+TGG - chr7_4:57370613-57370632 Msa1165470:intron 40.0%
!! ATGTCATTCTACACCGGTTT+AGG - chr7_4:57370658-57370677 Msa1165470:intron 40.0%
!! TGTCATTCTACACCGGTTTA+GGG - chr7_4:57370659-57370678 Msa1165470:intron 40.0%
ATTCTTCCTGATGGTACACT+AGG - chr7_4:57370691-57370710 Msa1165470:intron 40.0%
AAGGATAAATGTCGAGCATC+AGG + chr7_4:57370778-57370797 None:intergenic 40.0%
!! AACATTCCAGGATTTGCTGA+AGG - chr7_4:57371062-57371081 Msa1165470:CDS 40.0%
ATTCATCCTTCAGCAAATCC+TGG + chr7_4:57371071-57371090 None:intergenic 40.0%
AGATGCTAAAACAAGCTGAG+AGG + chr7_4:57371124-57371143 None:intergenic 40.0%
TGTACTTCTCATCTGGAGAA+GGG + chr7_4:57371200-57371219 None:intergenic 40.0%
ATGTACTTCTCATCTGGAGA+AGG + chr7_4:57371201-57371220 None:intergenic 40.0%
CTCCATAACTCTACCTTCTT+TGG + chr7_4:57371279-57371298 None:intergenic 40.0%
TGCCGATGGAAAATTTGTCA+GGG - chr7_4:57371299-57371318 Msa1165470:CDS 40.0%
! CTCCCTGACAAATTTTCCAT+CGG + chr7_4:57371304-57371323 None:intergenic 40.0%
AATTGGAATGTCTTCGGCAA+GGG + chr7_4:57371340-57371359 None:intergenic 40.0%
TAATTGGAATGTCTTCGGCA+AGG + chr7_4:57371341-57371360 None:intergenic 40.0%
CGCACACTATTGGATGTAAT+TGG + chr7_4:57371357-57371376 None:intergenic 40.0%
ATAAGCCATCAACGCTTTAC+TGG - chr7_4:57371409-57371428 Msa1165470:CDS 40.0%
!! CTATACCAGTAAAGCGTTGA+TGG + chr7_4:57371417-57371436 None:intergenic 40.0%
TTCTTCTTGGGCATGTACTT+TGG - chr7_4:57371458-57371477 Msa1165470:intron 40.0%
GTATCCATACGCAAGATTTG+GGG - chr7_4:57371749-57371768 Msa1165470:CDS 40.0%
TATCCATACGCAAGATTTGG+GGG - chr7_4:57371750-57371769 Msa1165470:CDS 40.0%
GTGAAATTTGCAAGCCAATG+TGG - chr7_4:57371804-57371823 Msa1165470:CDS 40.0%
GAATGGTAAGTGATCCACAT+TGG + chr7_4:57371821-57371840 None:intergenic 40.0%
! TTGCTTCATTTGAGGTCTCT+AGG - chr7_4:57372051-57372070 Msa1165470:intron 40.0%
! TGCTTCATTTGAGGTCTCTA+GGG - chr7_4:57372052-57372071 Msa1165470:intron 40.0%
! TCTAGGGTAGAAACTCAAGA+CGG - chr7_4:57372068-57372087 Msa1165470:intron 40.0%
ACAAGCTTGATCTTCGCTAT+GGG - chr7_4:57372180-57372199 Msa1165470:CDS 40.0%
ACAATGTCAACTGCAAACCT+CGG + chr7_4:57372279-57372298 None:intergenic 40.0%
TGAGCATGCAAACCAATTGT+TGG + chr7_4:57372393-57372412 None:intergenic 40.0%
AGGAGCTATATAGATGCTCA+TGG + chr7_4:57372443-57372462 None:intergenic 40.0%
GCATCTATATAGCTCCTGTT+AGG - chr7_4:57372446-57372465 Msa1165470:intron 40.0%
! TTCTTGGTGTGATGATTCAC+TGG - chr7_4:57372526-57372545 Msa1165470:intron 40.0%
! CTTCTGAAGATCGATCGAAT+AGG + chr7_4:57372637-57372656 None:intergenic 40.0%
GAAGATGTATACTCTGATCC+TGG - chr7_4:57372653-57372672 Msa1165470:intron 40.0%
AGGTAGTAAGGAACGAATCT+GGG - chr7_4:57372911-57372930 Msa1165470:intron 40.0%
GTCTGTTGTTGCTCTAATGT+CGG - chr7_4:57372959-57372978 Msa1165470:CDS 40.0%
CTAATGTCGGATCAAGAAGA+AGG - chr7_4:57372972-57372991 Msa1165470:CDS 40.0%
CATTGCAGAAAGAGATGATC+AGG - chr7_4:57373135-57373154 Msa1165470:CDS 40.0%
CAGGTATCAAAGAAAAGACG+GGG - chr7_4:57373154-57373173 Msa1165470:CDS 40.0%
!! TCTGTTGATGGATTGTAACC+AGG + chr7_4:57373209-57373228 None:intergenic 40.0%
GGTTACAATCCATCAACAGA+CGG - chr7_4:57373209-57373228 Msa1165470:CDS 40.0%
GCTCTCCAAATGAATTTGCA+GGG - chr7_4:57373303-57373322 Msa1165470:CDS 40.0%
CCAATCCCTGCAAATTCATT+TGG + chr7_4:57373311-57373330 None:intergenic 40.0%
CCAAATGAATTTGCAGGGAT+TGG - chr7_4:57373308-57373327 Msa1165470:CDS 40.0%
TGACAATTATCTGCGCTGTT+TGG - chr7_4:57373377-57373396 Msa1165470:CDS 40.0%
AATATACTGAACCGGAACAG+AGG + chr7_4:57373435-57373454 None:intergenic 40.0%
GTGAAGTAGAGGCTAATGAT+AGG - chr7_4:57373546-57373565 Msa1165470:CDS 40.0%
GAGAAATGGGACTGAAGATA+AGG + chr7_4:57373655-57373674 None:intergenic 40.0%
!! TTGGTCTCTTCACTTTTGTG+AGG - chr7_4:57373697-57373716 Msa1165470:CDS 40.0%
!! TCTTCACTTTTGTGAGGCTT+AGG - chr7_4:57373703-57373722 Msa1165470:CDS 40.0%
TGAGGCTTAGGTTTCTTCTT+CGG - chr7_4:57373715-57373734 Msa1165470:CDS 40.0%
!!! ATTTTTTGGCTGTCCCATCT+AGG - chr7_4:57373948-57373967 Msa1165470:intron 40.0%
TTTGGATGAGCTACCTAGAT+GGG + chr7_4:57373964-57373983 None:intergenic 40.0%
!! CCACCAACAGCTATTTTCTT+TGG + chr7_4:57373982-57374001 None:intergenic 40.0%
CCAAAGAAAATAGCTGTTGG+TGG - chr7_4:57373979-57373998 Msa1165470:intron 40.0%
AACAGAACCCTTACTCCTTT+CGG - chr7_4:57374090-57374109 Msa1165470:intron 40.0%
CTGAAAACCGAAAGGAGTAA+GGG + chr7_4:57374100-57374119 None:intergenic 40.0%
AAGCCTATCTTGCTTATCCA+TGG - chr7_4:57374372-57374391 Msa1165470:intron 40.0%
AGCCTATCTTGCTTATCCAT+GGG - chr7_4:57374373-57374392 Msa1165470:intron 40.0%
GATTATTATCCTCTTCCCCA+TGG + chr7_4:57374392-57374411 None:intergenic 40.0%
ATTAACCATGCAGGTAAGAG+AGG - chr7_4:57374419-57374438 Msa1165470:intron 40.0%
AAATTCCTCTCTTACCTGCA+TGG + chr7_4:57374427-57374446 None:intergenic 40.0%
TTTGAAAGGGATAATCCCCT+TGG - chr7_4:57374494-57374513 Msa1165470:intron 40.0%
TGGCTAAAGTAAGACTCCAA+GGG + chr7_4:57374513-57374532 None:intergenic 40.0%
TTGGCTAAAGTAAGACTCCA+AGG + chr7_4:57374514-57374533 None:intergenic 40.0%
GAATAGAAGCAGCAAGCAAT+TGG + chr7_4:57374533-57374552 None:intergenic 40.0%
!! CAGGTTTTTCAATGCTCTGA+AGG - chr7_4:57374575-57374594 Msa1165470:CDS 40.0%
ATTCTGCCTTATGAAAGCCA+TGG - chr7_4:57374624-57374643 Msa1165470:CDS 40.0%
GAATAGCCATGGCTTTCATA+AGG + chr7_4:57374633-57374652 None:intergenic 40.0%
! AAAGCATCATGCATGTCCTT+TGG - chr7_4:57374661-57374680 Msa1165470:CDS 40.0%
AAGCATCATGCATGTCCTTT+GGG - chr7_4:57374662-57374681 Msa1165470:CDS 40.0%
ATCATGATCTTCACCTGCAT+CGG + chr7_4:57374730-57374749 None:intergenic 40.0%
GAAGAAGAGAAGGGTTGGAA+GGG + chr7_4:57369571-57369590 None:intergenic 45.0%
AGCAGAAATCAACCGCGAAA+TGG + chr7_4:57369867-57369886 None:intergenic 45.0%
! CCTTCGAGTACAGACTTTTC+AGG + chr7_4:57370141-57370160 None:intergenic 45.0%
CCTGAAAAGTCTGTACTCGA+AGG - chr7_4:57370138-57370157 Msa1165470:intron 45.0%
AATGACAATGCAGGAACTGG+CGG + chr7_4:57370511-57370530 None:intergenic 45.0%
CTTGCTAATTCAGTCAGTGG+AGG + chr7_4:57370580-57370599 None:intergenic 45.0%
! CTCCACTGACTGAATTAGCA+AGG - chr7_4:57370578-57370597 Msa1165470:intron 45.0%
ACTGACTGAATTAGCAAGGC+CGG - chr7_4:57370582-57370601 Msa1165470:intron 45.0%
! AAACCAGCCAACTTTTCCTC+CGG + chr7_4:57370604-57370623 None:intergenic 45.0%
AGTCGCATGTCATTCTACAC+CGG - chr7_4:57370652-57370671 Msa1165470:intron 45.0%
TAACCGTGTATCTCAACCTC+AGG + chr7_4:57370718-57370737 None:intergenic 45.0%
CTCATTCACACGAATGCTGA+AGG + chr7_4:57370797-57370816 None:intergenic 45.0%
CTTCAGCATTCGTGTGAATG+AGG - chr7_4:57370795-57370814 Msa1165470:CDS 45.0%
ACATCAGGCGACTGAAACAA+AGG + chr7_4:57370883-57370902 None:intergenic 45.0%
AGCTCCACCAAAGAAACCTT+TGG - chr7_4:57370984-57371003 Msa1165470:CDS 45.0%
GGAACCAAAGGTTTCTTTGG+TGG + chr7_4:57370991-57371010 None:intergenic 45.0%
CCAGGAACCAAAGGTTTCTT+TGG + chr7_4:57370994-57371013 None:intergenic 45.0%
! CCAAAGAAACCTTTGGTTCC+TGG - chr7_4:57370991-57371010 Msa1165470:CDS 45.0%
! AAGAAACCTTTGGTTCCTGG+TGG - chr7_4:57370994-57371013 Msa1165470:CDS 45.0%
! AGAAACCTTTGGTTCCTGGT+GGG - chr7_4:57370995-57371014 Msa1165470:CDS 45.0%
!!! GATTGAATTTTTGGCCCACC+AGG + chr7_4:57371012-57371031 None:intergenic 45.0%
! AGAGAGGTATAAACAGCTGG+AGG + chr7_4:57371174-57371193 None:intergenic 45.0%
TCCAGCTGTTTATACCTCTC+TGG - chr7_4:57371173-57371192 Msa1165470:CDS 45.0%
! TCCAGAGAGGTATAAACAGC+TGG + chr7_4:57371177-57371196 None:intergenic 45.0%
! GTGCCGATGGAAAATTTGTC+AGG - chr7_4:57371298-57371317 Msa1165470:CDS 45.0%
ATTGGAATGTCTTCGGCAAG+GGG + chr7_4:57371339-57371358 None:intergenic 45.0%
ACATCCAATAGTGTGCGGAA+AGG - chr7_4:57371360-57371379 Msa1165470:CDS 45.0%
CATCCAATAGTGTGCGGAAA+GGG - chr7_4:57371361-57371380 Msa1165470:CDS 45.0%
!! AGATTTGGGGGCTGTTTTCA+TGG - chr7_4:57371762-57371781 Msa1165470:CDS 45.0%
CACAAGCTTGATCTTCGCTA+TGG - chr7_4:57372179-57372198 Msa1165470:CDS 45.0%
CTTGATCTTCGCTATGGGTA+TGG - chr7_4:57372185-57372204 Msa1165470:CDS 45.0%
ATAAAGAAAGGGGGCGATGA+AGG - chr7_4:57372725-57372744 Msa1165470:intron 45.0%
CAGGTAGTAAGGAACGAATC+TGG - chr7_4:57372910-57372929 Msa1165470:intron 45.0%
ACGAATCTGGGAGAGTGATA+AGG - chr7_4:57372923-57372942 Msa1165470:CDS 45.0%
AATGATGCAAGCTGAGGGTA+TGG + chr7_4:57373119-57373138 None:intergenic 45.0%
TCTGCAATGATGCAAGCTGA+GGG + chr7_4:57373124-57373143 None:intergenic 45.0%
TTCTGCAATGATGCAAGCTG+AGG + chr7_4:57373125-57373144 None:intergenic 45.0%
ACCAGGTGGCAAGTATAATG+TGG + chr7_4:57373192-57373211 None:intergenic 45.0%
!! GTTGATGGATTGTAACCAGG+TGG + chr7_4:57373206-57373225 None:intergenic 45.0%
GTCCTTTGCCATGTTTGGTT+TGG - chr7_4:57373231-57373250 Msa1165470:CDS 45.0%
GACCAAACCAAACATGGCAA+AGG + chr7_4:57373236-57373255 None:intergenic 45.0%
GGGTAAGACCAAACCAAACA+TGG + chr7_4:57373242-57373261 None:intergenic 45.0%
!! TGTTTGGTTTGGTCTTACCC+TGG - chr7_4:57373242-57373261 Msa1165470:CDS 45.0%
GGCTCTCCAAATGAATTTGC+AGG - chr7_4:57373302-57373321 Msa1165470:CDS 45.0%
! CCTTTTAGCCAGCCAAAGAA+GGG + chr7_4:57373345-57373364 None:intergenic 45.0%
! ACCTTTTAGCCAGCCAAAGA+AGG + chr7_4:57373346-57373365 None:intergenic 45.0%
TGCAGGTTTGCAATCCTATC+TGG - chr7_4:57373497-57373516 Msa1165470:CDS 45.0%
GGCCCAACCATTCCTATTAT+CGG - chr7_4:57373518-57373537 Msa1165470:CDS 45.0%
CGCCGATAATAGGAATGGTT+GGG + chr7_4:57373523-57373542 None:intergenic 45.0%
TCGCCGATAATAGGAATGGT+TGG + chr7_4:57373524-57373543 None:intergenic 45.0%
AACCATTCCTATTATCGGCG+AGG - chr7_4:57373523-57373542 Msa1165470:CDS 45.0%
ACCATTCCTATTATCGGCGA+GGG - chr7_4:57373524-57373543 Msa1165470:CDS 45.0%
GCAATTAGTTGCAAGTGCAG+AGG - chr7_4:57373826-57373845 Msa1165470:CDS 45.0%
AATAAAAGCTTACCCCACGC+CGG + chr7_4:57373871-57373890 None:intergenic 45.0%
CTTTGGATGAGCTACCTAGA+TGG + chr7_4:57373965-57373984 None:intergenic 45.0%
ATTCATGACTGCCAACCTTC+TGG - chr7_4:57374017-57374036 Msa1165470:intron 45.0%
!!! GCCCCTCATCTTTTTTGTTG+TGG - chr7_4:57374045-57374064 Msa1165470:intron 45.0%
TGTTGTGGAATTGCTCGTTC+TGG - chr7_4:57374060-57374079 Msa1165470:intron 45.0%
CCTGAAAACCGAAAGGAGTA+AGG + chr7_4:57374101-57374120 None:intergenic 45.0%
! CCTTACTCCTTTCGGTTTTC+AGG - chr7_4:57374098-57374117 Msa1165470:intron 45.0%
GGTAGTACCTGAAAACCGAA+AGG + chr7_4:57374108-57374127 None:intergenic 45.0%
TGAAGACAGAACTCTTTGGG+AGG - chr7_4:57374296-57374315 Msa1165470:intron 45.0%
GCCTATCTTGCTTATCCATG+GGG - chr7_4:57374374-57374393 Msa1165470:intron 45.0%
TCCCCATGGATAAGCAAGAT+AGG + chr7_4:57374378-57374397 None:intergenic 45.0%
GGGGAAGAGGATAATAATCC+AGG - chr7_4:57374393-57374412 Msa1165470:intron 45.0%
TCCAGGAACATTAACCATGC+AGG - chr7_4:57374410-57374429 Msa1165470:intron 45.0%
ACCTGCATGGTTAATGTTCC+TGG + chr7_4:57374414-57374433 None:intergenic 45.0%
GGCTAAAGTAAGACTCCAAG+GGG + chr7_4:57374512-57374531 None:intergenic 45.0%
!! TTCAATGCTCTGAAGGGTCA+TGG - chr7_4:57374582-57374601 Msa1165470:CDS 45.0%
! ATGCATGTCCTTTGGGAAAC+AGG - chr7_4:57374669-57374688 Msa1165470:CDS 45.0%
! TCCTTTGGGAAACAGGTAGA+TGG - chr7_4:57374676-57374695 Msa1165470:CDS 45.0%
GTGTCAAATACTTCCGATGC+AGG - chr7_4:57374714-57374733 Msa1165470:CDS 45.0%
GCAGGTGAAGATCATGATAC+TGG - chr7_4:57374732-57374751 Msa1165470:CDS 45.0%
TGCAGATGCTGAAAGCAAAG+TGG - chr7_4:57374785-57374804 Msa1165470:CDS 45.0%
AAGAATCCCATTCTCTGCCA+AGG - chr7_4:57374856-57374875 Msa1165470:five_prime_UTR 45.0%
TGATGACCTTGGCAGAGAAT+GGG + chr7_4:57374865-57374884 None:intergenic 45.0%
ATGATGACCTTGGCAGAGAA+TGG + chr7_4:57374866-57374885 None:intergenic 45.0%
GGAAGAAGAGAAGGGTTGGA+AGG + chr7_4:57369572-57369591 None:intergenic 50.0%
GAGAGGAAGAAGAGAAGGGT+TGG + chr7_4:57369576-57369595 None:intergenic 50.0%
GAGCGAGAGGAAGAAGAGAA+GGG + chr7_4:57369580-57369599 None:intergenic 50.0%
AGGTGCTAAATGGCGAAAGC+GGG + chr7_4:57369663-57369682 None:intergenic 50.0%
! GAGGTGCTAAATGGCGAAAG+CGG + chr7_4:57369664-57369683 None:intergenic 50.0%
!! CAGCAGTGAGAGGTGCTAAA+TGG + chr7_4:57369673-57369692 None:intergenic 50.0%
ACTGCTGTCTCCACTGAAGA+CGG - chr7_4:57369686-57369705 Msa1165470:CDS 50.0%
!! ATCGTAGAAAGTATCGGCGG+TGG + chr7_4:57369750-57369769 None:intergenic 50.0%
TGTTCCTCCACCTGTGATCA+GGG - chr7_4:57370471-57370490 Msa1165470:CDS 50.0%
TCAACGATGTCCCTGATCAC+AGG + chr7_4:57370484-57370503 None:intergenic 50.0%
GGCCTTGCTAATTCAGTCAG+TGG + chr7_4:57370583-57370602 None:intergenic 50.0%
TCAGGTCCTAGTGTACCATC+AGG + chr7_4:57370700-57370719 None:intergenic 50.0%
TGATGGTACACTAGGACCTG+AGG - chr7_4:57370699-57370718 Msa1165470:intron 50.0%
GGACCTGAGGTTGAGATACA+CGG - chr7_4:57370712-57370731 Msa1165470:intron 50.0%
GAGATACACGGTTACCCTGA+AGG - chr7_4:57370724-57370743 Msa1165470:intron 50.0%
CAGCATTCGTGTGAATGAGG+AGG - chr7_4:57370798-57370817 Msa1165470:CDS 50.0%
! CAGAGTATGGGTTGCAGATG+TGG - chr7_4:57370840-57370859 Msa1165470:intron 50.0%
TGGGTTGCAGATGTGGAAAC+AGG - chr7_4:57370847-57370866 Msa1165470:intron 50.0%
GGGTTGCAGATGTGGAAACA+GGG - chr7_4:57370848-57370867 Msa1165470:intron 50.0%
TGCACCATTCCATCAACTCG+TGG - chr7_4:57370961-57370980 Msa1165470:intron 50.0%
!! AGCTCCACGAGTTGATGGAA+TGG + chr7_4:57370968-57370987 None:intergenic 50.0%
!! GTAGAGTTATGGAGTGCCGA+TGG - chr7_4:57371285-57371304 Msa1165470:CDS 50.0%
CATCCCTTTCCGCACACTAT+TGG + chr7_4:57371367-57371386 None:intergenic 50.0%
GAGCAATCATTCGGGTACAC+AGG - chr7_4:57371707-57371726 Msa1165470:CDS 50.0%
AGGGTAGAAACTCAAGACGG+AGG - chr7_4:57372071-57372090 Msa1165470:intron 50.0%
AGACGGAGGTGATGCAAAAG+TGG - chr7_4:57372085-57372104 Msa1165470:intron 50.0%
! CAACCTGCTGAAGCACTAGA+AGG - chr7_4:57372137-57372156 Msa1165470:intron 50.0%
TCACCTTCTAGTGCTTCAGC+AGG + chr7_4:57372143-57372162 None:intergenic 50.0%
AGCACTAGAAGGTGAACAGC+CGG - chr7_4:57372148-57372167 Msa1165470:CDS 50.0%
CATCAACCATGAACCTGCTC+AGG + chr7_4:57372478-57372497 None:intergenic 50.0%
AGAACATGGGTAGTCTCTCC+TGG - chr7_4:57372587-57372606 Msa1165470:intron 50.0%
GGAGTCACATCTTCAGATCC+AGG + chr7_4:57372608-57372627 None:intergenic 50.0%
GATCGATCGAATAGGATGCG+TGG + chr7_4:57372629-57372648 None:intergenic 50.0%
GCTTGAGTTCTCCGTAGCAT+GGG + chr7_4:57372683-57372702 None:intergenic 50.0%
AGCTTGAGTTCTCCGTAGCA+TGG + chr7_4:57372684-57372703 None:intergenic 50.0%
ATGCTACGGAGAACTCAAGC+TGG - chr7_4:57372683-57372702 Msa1165470:intron 50.0%
TGCTACGGAGAACTCAAGCT+GGG - chr7_4:57372684-57372703 Msa1165470:intron 50.0%
GAAGTGGTGCAACACCAGAA+GGG - chr7_4:57372768-57372787 Msa1165470:intron 50.0%
AGGAATGGAACGTTCCCTTC+TGG + chr7_4:57372785-57372804 None:intergenic 50.0%
! CAAGCTGAGGGTATGGATGA+GGG + chr7_4:57373112-57373131 None:intergenic 50.0%
GCCACATTATACTTGCCACC+TGG - chr7_4:57373188-57373207 Msa1165470:CDS 50.0%
AGACGGTCCTTTGCCATGTT+TGG - chr7_4:57373226-57373245 Msa1165470:CDS 50.0%
CATTTGGAGAGCCTCGAACT+TGG + chr7_4:57373295-57373314 None:intergenic 50.0%
! CCCTTCTTTGGCTGGCTAAA+AGG - chr7_4:57373342-57373361 Msa1165470:CDS 50.0%
TAGGAATGGTTGGGCCAGAT+AGG + chr7_4:57373514-57373533 None:intergenic 50.0%
ACCCTCGCCGATAATAGGAA+TGG + chr7_4:57373528-57373547 None:intergenic 50.0%
ACTTCACCCTCGCCGATAAT+AGG + chr7_4:57373533-57373552 None:intergenic 50.0%
CTGCCGTGGAAGAAGTTATC+CGG - chr7_4:57373849-57373868 Msa1165470:CDS 50.0%
ACGCCGGATAACTTCTTCCA+CGG + chr7_4:57373855-57373874 None:intergenic 50.0%
TGGAAGAAGTTATCCGGCGT+GGG - chr7_4:57373855-57373874 Msa1165470:CDS 50.0%
! GCTGTTGGTGGACATTCCTA+TGG - chr7_4:57373991-57374010 Msa1165470:intron 50.0%
GGCAGTCATGAATGCACCAT+AGG + chr7_4:57374010-57374029 None:intergenic 50.0%
CTTGCTTATCCATGGGGAAG+AGG - chr7_4:57374380-57374399 Msa1165470:intron 50.0%
! AGGGTCATGGTGCTCTAAGT+CGG - chr7_4:57374595-57374614 Msa1165470:CDS 50.0%
AAAGCCATGGCTATTCTGCC+AGG - chr7_4:57374637-57374656 Msa1165470:CDS 50.0%
AAGCCATGGCTATTCTGCCA+GGG - chr7_4:57374638-57374657 Msa1165470:CDS 50.0%
TTTCCCTGGCAGAATAGCCA+TGG + chr7_4:57374644-57374663 None:intergenic 50.0%
GACATGCATGATGCTTTCCC+TGG + chr7_4:57374658-57374677 None:intergenic 50.0%
GCCATCTACCTGTTTCCCAA+AGG + chr7_4:57374680-57374699 None:intergenic 50.0%
! TTCTTTGCTGCCACTTCCAC+TGG + chr7_4:57374817-57374836 None:intergenic 50.0%
CTCTGCCAAGGTCATCATTG+TGG - chr7_4:57374868-57374887 Msa1165470:five_prime_UTR 50.0%
GGGTTGGAAGGGAACGATGA+TGG + chr7_4:57369560-57369579 None:intergenic 55.0%
GGAGCGAGAGGAAGAAGAGA+AGG + chr7_4:57369581-57369600 None:intergenic 55.0%
TAAATGGCGAAAGCGGGAGG+TGG + chr7_4:57369657-57369676 None:intergenic 55.0%
TGCTAAATGGCGAAAGCGGG+AGG + chr7_4:57369660-57369679 None:intergenic 55.0%
TCAGTGGAGACAGCAGTGAG+AGG + chr7_4:57369683-57369702 None:intergenic 55.0%
GGAAGAAACGGAGCCGTTGA+CGG + chr7_4:57369723-57369742 None:intergenic 55.0%
!! GTAGAAAGTATCGGCGGTGG+CGG + chr7_4:57369747-57369766 None:intergenic 55.0%
GTGTTCCTCCACCTGTGATC+AGG - chr7_4:57370470-57370489 Msa1165470:CDS 55.0%
ATGTCCCTGATCACAGGTGG+AGG + chr7_4:57370478-57370497 None:intergenic 55.0%
ACGATGTCCCTGATCACAGG+TGG + chr7_4:57370481-57370500 None:intergenic 55.0%
GACTGAATTAGCAAGGCCGG+AGG - chr7_4:57370585-57370604 Msa1165470:intron 55.0%
AGCAAGGCCGGAGGAAAAGT+TGG - chr7_4:57370594-57370613 Msa1165470:intron 55.0%
TTTGGCCCACCAGGAACCAA+AGG + chr7_4:57371003-57371022 None:intergenic 55.0%
ATCTGGAGAAGGGTCCAGAG+AGG + chr7_4:57371190-57371209 None:intergenic 55.0%
CAGCCCCCAAATCTTGCGTA+TGG + chr7_4:57371756-57371775 None:intergenic 55.0%
! AAGTGTGCTGCTCAAAGCCG+AGG - chr7_4:57372259-57372278 Msa1165470:intron 55.0%
TGCTCAGGCCCTATCCTAAC+AGG + chr7_4:57372463-57372482 None:intergenic 55.0%
TGTTAGGATAGGGCCTGAGC+AGG - chr7_4:57372462-57372481 Msa1165470:intron 55.0%
ATAGGGCCTGAGCAGGTTCA+TGG - chr7_4:57372469-57372488 Msa1165470:intron 55.0%
! ATCCTGGCTCTCCCATGCTA+CGG - chr7_4:57372669-57372688 Msa1165470:intron 55.0%
GGAAGTGGTGCAACACCAGA+AGG - chr7_4:57372767-57372786 Msa1165470:intron 55.0%
! GCAAGCTGAGGGTATGGATG+AGG + chr7_4:57373113-57373132 None:intergenic 55.0%
GGCAAAGGACCGTCTGTTGA+TGG + chr7_4:57373221-57373240 None:intergenic 55.0%
GATGCTGCTAGCCAAGTTCG+AGG - chr7_4:57373281-57373300 Msa1165470:CDS 55.0%
GTTCCACGTCAGCCCTTCTT+TGG - chr7_4:57373330-57373349 Msa1165470:CDS 55.0%
TATCGGCGAGGGTGAAGTAG+AGG - chr7_4:57373535-57373554 Msa1165470:CDS 55.0%
GTGGAAGAAGTTATCCGGCG+TGG - chr7_4:57373854-57373873 Msa1165470:CDS 55.0%
GGAAGAAGTTATCCGGCGTG+GGG - chr7_4:57373856-57373875 Msa1165470:CDS 55.0%
!! GTGCTGCTTTGCAGTCAGAC+AGG - chr7_4:57374556-57374575 Msa1165470:intron 55.0%
! TCATGGTGCTCTAAGTCGGC+TGG - chr7_4:57374599-57374618 Msa1165470:CDS 55.0%
AGCAAAGTGGTTGCAGCCAG+TGG - chr7_4:57374798-57374817 Msa1165470:CDS 55.0%
CGACGGAGAGTGAGGAAACG+CGG + chr7_4:57369605-57369624 None:intergenic 60.0%
AGTTGGCAGCGGTTCTGCGA+CGG + chr7_4:57369622-57369641 None:intergenic 60.0%
CATGGAGGCGAAGTTGGCAG+CGG + chr7_4:57369633-57369652 None:intergenic 60.0%
GGTGGACATGGAGGCGAAGT+TGG + chr7_4:57369639-57369658 None:intergenic 60.0%
AAAGCGGGAGGTGGACATGG+AGG + chr7_4:57369648-57369667 None:intergenic 60.0%
AGGCCGGAGGAAAAGTTGGC+TGG - chr7_4:57370598-57370617 Msa1165470:intron 60.0%
! GGTGGAGCTCCACGAGTTGA+TGG + chr7_4:57370973-57370992 None:intergenic 60.0%
CAGCCAAAGAAGGGCTGACG+TGG + chr7_4:57373336-57373355 None:intergenic 60.0%
CACGTCAGCCCTTCTTTGGC+TGG - chr7_4:57373334-57373353 Msa1165470:CDS 60.0%
! AGGGGCATGTGCCAGAAGGT+TGG + chr7_4:57374031-57374050 None:intergenic 60.0%
! GATGAGGGGCATGTGCCAGA+AGG + chr7_4:57374035-57374054 None:intergenic 60.0%
GTGGTTGCAGCCAGTGGAAG+TGG - chr7_4:57374804-57374823 Msa1165470:CDS 60.0%
GGAGAGTGGAGCGATGCCGA+TGG + chr7_4:57369523-57369542 None:intergenic 65.0%
AGGAAACGCGGAGGAGCGAG+AGG + chr7_4:57369593-57369612 None:intergenic 65.0%
CGGAGAGTGAGGAAACGCGG+AGG + chr7_4:57369602-57369621 None:intergenic 65.0%
CGGTTCTGCGACGGAGAGTG+AGG + chr7_4:57369613-57369632 None:intergenic 65.0%
GCGAAAGCGGGAGGTGGACA+TGG + chr7_4:57369651-57369670 None:intergenic 65.0%
GTCTCCACTGAAGACGGCGC+CGG - chr7_4:57369692-57369711 Msa1165470:CDS 65.0%
!! GGCGGTGGCGGAGGAAGAAA+CGG + chr7_4:57369735-57369754 None:intergenic 65.0%
!! GAAAGTATCGGCGGTGGCGG+AGG + chr7_4:57369744-57369763 None:intergenic 65.0%
CTCCGTAGCATGGGAGAGCC+AGG + chr7_4:57372674-57372693 None:intergenic 65.0%
TGCAAGTGCAGAGGCTGCCG+TGG - chr7_4:57373835-57373854 Msa1165470:CDS 65.0%
! TCCACTGAAGACGGCGCCGG+TGG - chr7_4:57369695-57369714 Msa1165470:CDS 70.0%
TCCACCGGCGCCGTCTTCAG+TGG + chr7_4:57369699-57369718 None:intergenic 70.0%
GGAGCCGTTGACGGCTCCAC+CGG + chr7_4:57369714-57369733 None:intergenic 70.0%
!! GGCGCCGGTGGAGCCGTCAA+CGG - chr7_4:57369707-57369726 Msa1165470:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 57369450 57374893 57369450 ID=Msa1165470;Name=Msa1165470
chr7_4 mRNA 57369450 57374893 57369450 ID=Msa1165470-mRNA-1;Parent=Msa1165470;Name=Msa1165470-mRNA-1;_AED=0.17;_eAED=0.17;_QI=47|0.88|0.9|1|1|1|10|0|990
chr7_4 exon 57369450 57369851 57369450 ID=Msa1165470-mRNA-1:exon:17339;Parent=Msa1165470-mRNA-1
chr7_4 exon 57369912 57370049 57369912 ID=Msa1165470-mRNA-1:exon:17338;Parent=Msa1165470-mRNA-1
chr7_4 exon 57370224 57370373 57370224 ID=Msa1165470-mRNA-1:exon:17337;Parent=Msa1165470-mRNA-1
chr7_4 exon 57370466 57370526 57370466 ID=Msa1165470-mRNA-1:exon:17336;Parent=Msa1165470-mRNA-1
chr7_4 exon 57370776 57370841 57370776 ID=Msa1165470-mRNA-1:exon:17335;Parent=Msa1165470-mRNA-1
chr7_4 exon 57370980 57371438 57370980 ID=Msa1165470-mRNA-1:exon:17334;Parent=Msa1165470-mRNA-1
chr7_4 exon 57371524 57371823 57371524 ID=Msa1165470-mRNA-1:exon:17333;Parent=Msa1165470-mRNA-1
chr7_4 exon 57372142 57372270 57372142 ID=Msa1165470-mRNA-1:exon:17332;Parent=Msa1165470-mRNA-1
chr7_4 exon 57372913 57373900 57372913 ID=Msa1165470-mRNA-1:exon:17331;Parent=Msa1165470-mRNA-1
chr7_4 exon 57374567 57374893 57374567 ID=Msa1165470-mRNA-1:exon:17330;Parent=Msa1165470-mRNA-1
chr7_4 five_prime_UTR 57374847 57374893 57374847 ID=Msa1165470-mRNA-1:five_prime_utr;Parent=Msa1165470-mRNA-1
chr7_4 CDS 57374567 57374846 57374567 ID=Msa1165470-mRNA-1:cds;Parent=Msa1165470-mRNA-1
chr7_4 CDS 57372913 57373900 57372913 ID=Msa1165470-mRNA-1:cds;Parent=Msa1165470-mRNA-1
chr7_4 CDS 57372142 57372270 57372142 ID=Msa1165470-mRNA-1:cds;Parent=Msa1165470-mRNA-1
chr7_4 CDS 57371524 57371823 57371524 ID=Msa1165470-mRNA-1:cds;Parent=Msa1165470-mRNA-1
chr7_4 CDS 57370980 57371438 57370980 ID=Msa1165470-mRNA-1:cds;Parent=Msa1165470-mRNA-1
chr7_4 CDS 57370776 57370841 57370776 ID=Msa1165470-mRNA-1:cds;Parent=Msa1165470-mRNA-1
chr7_4 CDS 57370466 57370526 57370466 ID=Msa1165470-mRNA-1:cds;Parent=Msa1165470-mRNA-1
chr7_4 CDS 57370224 57370373 57370224 ID=Msa1165470-mRNA-1:cds;Parent=Msa1165470-mRNA-1
chr7_4 CDS 57369912 57370049 57369912 ID=Msa1165470-mRNA-1:cds;Parent=Msa1165470-mRNA-1
chr7_4 CDS 57369450 57369851 57369450 ID=Msa1165470-mRNA-1:cds;Parent=Msa1165470-mRNA-1
Gene Sequence

>Msa1165470

ATGATGCGGATACACAAACTATACCATCGGCATCGCTCCACTCTCCTCTCTTTTTCTTCACCATCATCGTTCCCTTCCAACCCTTCTCTTCTTCCTCTCGCTCCTCCGCGTTTCCTCACTCTCCGTCGCAGAACCGCTGCCAACTTCGCCTCCATGTCCACCTCCCGCTTTCGCCATTTAGCACCTCTCACTGCTGTCTCCACTGAAGACGGCGCCGGTGGAGCCGTCAACGGCTCCGTTTCTTCCTCCGCCACCGCCGATACTTTCTACGATTACGAAGATGATTCAGCTTTAGGAGTAGGGTATCGTGTTCCTCCACCTGTGATCAGGGACATCGTTGATGCTCCGCCAGTTCCTGCATTGTCATTTTCACCATTTAGAGACAAAATTATTTTTCTCAAGCGAAGAGCTTTACCTCCACTGACTGAATTAGCAAGGCCGGAGGAAAAGTTGGCTGGTTTACGTATTGATGGATACTGCAATTCAAGGAGTCGCATGTCATTCTACACCGGTTTAGGGATCCATGAAATTCTTCCTGATGGTACACTAGGACCTGAGGTTGAGATACACGGTTACCCTGAAGGTGCGAAGATAAATTTTGTTACTTGGTCTCCTGATGCTCGACATTTATCCTTCAGCATTCGTGTGAATGAGGAGGACAATAATACTAGTAAACTCAGAGTATGGGTTGCAGATGTGGAAACAGGGAAAGCTAGACCTTTGTTTCAGTCGCCTGATGTATATTTGAATGCAGTTTTTGAAAACTATGTTTGGGTAGATAACTCTACATTGTTAGTTTGCACCATTCCATCAACTCGTGGAGCTCCACCAAAGAAACCTTTGGTTCCTGGTGGGCCAAAAATTCAATCTAATGAGCAGAAAAACATTATTCAAGTAAGAACATTCCAGGATTTGCTGAAGGATGAATACGATGAAGATTTGTTTGACTACTATGCGACCTCTCAGCTTGTTTTAGCATCTTTAGATGGTACTACAAAGGATTTTGGACCTCCAGCTGTTTATACCTCTCTGGACCCTTCTCCAGATGAGAAGTACATTATGATTGATTCAATGCATAGGCCATACTCTTTTATTGTACCTTGTGGAAGATTTCCAAAGAAGGTAGAGTTATGGAGTGCCGATGGAAAATTTGTCAGGGAGATTTGTGACTTGCCCCTTGCCGAAGACATTCCAATTACATCCAATAGTGTGCGGAAAGGGATGCGTTCTATTAATTGGAGAGCTGATAAGCCATCAACGCTTTACTGGGTAGAAACTCAAGACGGAGGTGATGCAAAAGTGGAAGTTTCTCCTCGTGATATAATCTACTCACAACCTGCTGAAGCACTAGAAGGTGAACAGCCGGTGATATTACACAAGCTTGATCTTCGCTATGGAGGAATTTCTTGGTGTGATGATTCACTGGCTTTTGTATACGAATCTTGGTATAAAACAAGGCGAATAAGAACATGGGTAGTCTCTCCTGGATCTGAAGATGTGACTCCACGCATCCTATTCGATCGATCTTCAGAAGATGTATACTCTGATCCTGGCTCTCCCATGCTACGGAGAACTCAAGCTGGGACATATATTATTGCAAAGATAAAGAAAGGGGGCGATGAAGGAAGATATATTATACTGAATGGAAGTGGTGCAACACCAGAAGGGAACGTTCCATTCCTTGATCTGTTTGACATAAATACAGGTAGTAAGGAACGAATCTGGGAGAGTGATAAGGAAAAGTACTTTGAGTCTGTTGTTGCTCTAATGTCGGATCAAGAAGAAGGAGATTTACAGTTAGATAGGCTGAAAATACTGACTTCAAAAGAGTCAAAAACTGAAAACACCCAATATAATTTTATTAGTTGGCCAGATAAAAAAATAATTCAGGTTACAAATTTCCCTCATCCATACCCTCAGCTTGCATCATTGCAGAAAGAGATGATCAGGTATCAAAGAAAAGACGGGGTTCAACTCACTGCCACATTATACTTGCCACCTGGTTACAATCCATCAACAGACGGTCCTTTGCCATGTTTGGTTTGGTCTTACCCTGGAGAATTTAAGAGCAAAGATGCTGCTAGCCAAGTTCGAGGCTCTCCAAATGAATTTGCAGGGATTGGTTCCACGTCAGCCCTTCTTTGGCTGGCTAAAAGGTTTGCAATCCTATCTGGCCCAACCATTCCTATTATCGGCGAGGGTGAAGTAGAGGCTAATGATAGCTATGTAGAGCAATTAGTTGCAAGTGCAGAGGCTGCCGTGGAAGAAGTTATCCGGCGTGGGGTAGCTCATCCAAAGAAAATAGCTGTTGGTGGACATTCCTATGGTGCATTCATGACTGCCAACCTTCTGGCACATGCCCCTCATCTTTTTTGTTGTGGAATTGCTCGTTCTGGTGCTTACAACAGAACCCTTACTCCTTTCGGTTTTCAGAATGAAGACAGAACTCTTTGGGAGGCCACTAATACTTATGTAGAGATGAGTCCTTTTATGTCGGCTAATAAAATTAAGAAGCCTATCTTGCTTATCCATGGGGAAGAGGATAATAATCCAGGAACATTAACCATGCAGTATTTGAAAGGGATAATCCCCTTGGAGTCTTACTTTAGCCAATTGCTTGCTGCTTCTATTCTTTGTGCTGCTTTGCAGTCAGACAGGTTTTTCAATGCTCTGAAGGGTCATGGTGCTCTAAGTCGGCTGGTGATTCTGCCTTATGAAAGCCATGGCTATTCTGCCAGGGAAAGCATCATGCATGTCCTTTGGGAAACAGGTAGATGGCTGCATAAATACTGTGTGTCAAATACTTCCGATGCAGGTGAAGATCATGATACTGGCACAGTCAAAGAAAATATTAGCAAAGGAATTGCAGATGCTGAAAGCAAAGTGGTTGCAGCCAGTGGAAGTGGCAGCAAAGAAGCGTGTGATCTCGAGCATGAAGAATCCCATTCTCTGCCAAGGTCATCATTGTGGTAA
Protein sequence

>Msa1165470

MMRIHKLYHRHRSTLLSFSSPSSFPSNPSLLPLAPPRFLTLRRRTAANFASMSTSRFRHLAPLTAVSTEDGAGGAVNGSVSSSATADTFYDYEDDSALGVGYRVPPPVIRDIVDAPPVPALSFSPFRDKIIFLKRRALPPLTELARPEEKLAGLRIDGYCNSRSRMSFYTGLGIHEILPDGTLGPEVEIHGYPEGAKINFVTWSPDARHLSFSIRVNEEDNNTSKLRVWVADVETGKARPLFQSPDVYLNAVFENYVWVDNSTLLVCTIPSTRGAPPKKPLVPGGPKIQSNEQKNIIQVRTFQDLLKDEYDEDLFDYYATSQLVLASLDGTTKDFGPPAVYTSLDPSPDEKYIMIDSMHRPYSFIVPCGRFPKKVELWSADGKFVREICDLPLAEDIPITSNSVRKGMRSINWRADKPSTLYWVETQDGGDAKVEVSPRDIIYSQPAEALEGEQPVILHKLDLRYGGISWCDDSLAFVYESWYKTRRIRTWVVSPGSEDVTPRILFDRSSEDVYSDPGSPMLRRTQAGTYIIAKIKKGGDEGRYIILNGSGATPEGNVPFLDLFDINTGSKERIWESDKEKYFESVVALMSDQEEGDLQLDRLKILTSKESKTENTQYNFISWPDKKIIQVTNFPHPYPQLASLQKEMIRYQRKDGVQLTATLYLPPGYNPSTDGPLPCLVWSYPGEFKSKDAASQVRGSPNEFAGIGSTSALLWLAKRFAILSGPTIPIIGEGEVEANDSYVEQLVASAEAAVEEVIRRGVAHPKKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATNTYVEMSPFMSANKIKKPILLIHGEEDNNPGTLTMQYLKGIIPLESYFSQLLAASILCAALQSDRFFNALKGHGALSRLVILPYESHGYSARESIMHVLWETGRWLHKYCVSNTSDAGEDHDTGTVKENISKGIADAESKVVAASGSGSKEACDLEHEESHSLPRSSLW*