AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0576090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0576090 MtrunA17_Chr8g0393301 96.379 359 7 4 8 365 1 354 0.0 698
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0576090 AT1G73470.3 53.582 349 87 6 99 401 36 355 2.35e-113 336
Msa0576090 AT1G73470.1 58.361 305 80 5 99 357 36 339 7.28e-112 332
Msa0576090 AT1G73470.2 61.017 236 60 4 154 357 1 236 9.84e-92 277

Find 106 sgRNAs with CRISPR-Local

Find 505 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCTTTGGTGATTTATTT+AGG 0.089905 4_1:+80164107 Msa0576090:CDS
TCATTCCTCTGAAGATTTAT+TGG 0.149385 4_1:+80164666 Msa0576090:three_prime_UTR
CTGATGCCCGTTCAACATTA+AGG 0.190999 4_1:+80159736 Msa0576090:CDS
TTCTTTGTGTTGTGCTTCTT+TGG 0.192325 4_1:+80164094 Msa0576090:CDS
CTTCTTTGGTGATTTATTTA+GGG 0.225922 4_1:+80164108 Msa0576090:CDS
TGCTTTGCTTGCAGCAAAAC+AGG 0.241936 4_1:+80160356 Msa0576090:CDS
CAGGCTTTGGGGAACACTTC+TGG 0.271955 4_1:+80163943 Msa0576090:intron
TAGTTGGCGACCAAATTATC+TGG 0.283079 4_1:+80160150 Msa0576090:intron
ATTTGTAAATATGTTAATAT+TGG 0.296880 4_1:+80164603 Msa0576090:three_prime_UTR
CATGGGAGTTGAAGTGTAAA+AGG 0.311623 4_1:-80159869 None:intergenic
TGGCATTTGGAACAGGCTTT+GGG 0.321059 4_1:+80163931 Msa0576090:intron
AGAAGCATGCTCACATTACT+TGG 0.329631 4_1:+80161000 Msa0576090:CDS
GCAAGGAATATTCAATTTAG+AGG 0.331754 4_1:-80159799 None:intergenic
TGCTGCAAGCAAAGCAGCTC+TGG 0.346036 4_1:-80160349 None:intergenic
ACATTCCGATTATTGCGATA+TGG 0.350934 4_1:-80159340 None:intergenic
GAAGGTGCGTTGTCTGAAAA+AGG 0.361249 4_1:+80159375 Msa0576090:CDS
GGTGCTGCGTCAAGATATCT+TGG 0.387678 4_1:+80160973 Msa0576090:CDS
TGAAGGACGAAGACGACAAC+AGG 0.392193 4_1:+80159408 Msa0576090:CDS
CAAGGTGGTGAGTGTGGAGT+TGG 0.401001 4_1:-80159827 None:intergenic
TGATAATAAAGGAACTAGTT+TGG 0.402063 4_1:+80159317 Msa0576090:intron
CCTTTCAAGGGTGGTGATTG+TGG 0.415760 4_1:+80164490 Msa0576090:three_prime_UTR
TGATGCCCGTTCAACATTAA+GGG 0.417198 4_1:+80159737 Msa0576090:CDS
TAGTTAAGTGGTTCCTTTCA+AGG 0.422172 4_1:+80164477 Msa0576090:exon
TAAGAAAGAGTTATTGAAGA+AGG 0.422174 4_1:+80160206 Msa0576090:CDS
TTTGAGCTCGTTGAAAACTT+TGG 0.422436 4_1:+80164525 Msa0576090:three_prime_UTR
GAATATTCAATTTAGAGGTT+AGG 0.429522 4_1:-80159794 None:intergenic
TTTGGCCATATCGCAATAAT+CGG 0.435047 4_1:+80159335 Msa0576090:CDS
GTTGGCGAAGATATATCAAT+TGG 0.442632 4_1:+80160044 Msa0576090:CDS
AAGGTGGTGAGTGTGGAGTT+GGG 0.450182 4_1:-80159826 None:intergenic
CGTTGAAAACTTTGGAGGAT+AGG 0.456694 4_1:+80164533 Msa0576090:three_prime_UTR
TCAAGCACCGACCGCAGCTC+AGG 0.456915 4_1:-80159445 None:intergenic
AACAATTTATGCTTTAGCTC+AGG 0.457648 4_1:+80164015 Msa0576090:CDS
TGATCTTGTCATTCAAATGC+TGG 0.458050 4_1:+80163967 Msa0576090:CDS
CCCGTTCAACATTAAGGGGT+TGG 0.466220 4_1:+80159742 Msa0576090:CDS
AGAAACACCTGGGGCCGAAA+AGG 0.474180 4_1:-80159507 None:intergenic
GGAGGAATATTTCAAGTTCA+AGG 0.474895 4_1:-80159845 None:intergenic
CCAACCCCTTAATGTTGAAC+GGG 0.477427 4_1:-80159742 None:intergenic
TCTTTCCATCCCCAGGGAGG+TGG 0.477468 4_1:+80160012 Msa0576090:intron
TACAATATCAACAAGTGGAG+TGG 0.486719 4_1:+80159082 Msa0576090:CDS
GAGCTCGTTGAAAACTTTGG+AGG 0.490758 4_1:+80164528 Msa0576090:three_prime_UTR
AAAGAAAATCATATCAAGTC+CGG 0.493375 4_1:-80164077 None:intergenic
TATGAGAGGAGGCGGATACA+TGG 0.498089 4_1:-80159887 None:intergenic
CCGCCTCCTCTCATACTCAA+TGG 0.501121 4_1:+80159895 Msa0576090:CDS
GATAGGGACGTGTCAGTAAA+CGG 0.511327 4_1:+80164550 Msa0576090:three_prime_UTR
ATATGATTTCCAGGGTGGGC+AGG 0.511840 4_1:+80160305 Msa0576090:intron
TGATTTATTTAGGGCACTTG+TGG 0.512723 4_1:+80164117 Msa0576090:CDS
CTTGTGATTGATTTAAGCAA+AGG 0.513602 4_1:-80159615 None:intergenic
GTTGAAAACTTTGGAGGATA+GGG 0.516789 4_1:+80164534 Msa0576090:three_prime_UTR
TTGAATGTCATGTTCAATCA+TGG 0.525210 4_1:-80159661 None:intergenic
GATGTATGGAAGGAAGTTGT+GGG 0.529895 4_1:+80159012 Msa0576090:exon
GGATGTATGGAAGGAAGTTG+TGG 0.529909 4_1:+80159011 Msa0576090:exon
AGCAAGACATTTCTGTAAGA+AGG 0.530037 4_1:-80159768 None:intergenic
CACAAGTGCATCAAGTAACA+TGG 0.532641 4_1:+80159632 Msa0576090:CDS
CTGGGTAAGTAGTGTTGTTG+TGG 0.533747 4_1:-80159178 None:intergenic
CTAAAGTCTAATTTGCCTGC+CGG 0.535076 4_1:+80164058 Msa0576090:CDS
AGTTAAGTGGTTCCTTTCAA+GGG 0.542583 4_1:+80164478 Msa0576090:exon
GTTCAACATTAAGGGGTTGG+AGG 0.546346 4_1:+80159745 Msa0576090:CDS
TCCAACCCCTTAATGTTGAA+CGG 0.546559 4_1:-80159743 None:intergenic
GTCCCGTGGGGATGTATGGA+AGG 0.552452 4_1:+80159002 None:intergenic
CCACAATCACCACCCTTGAA+AGG 0.553045 4_1:-80164490 None:intergenic
TCAATAACTCTTTCTTAACC+TGG 0.557788 4_1:-80160200 None:intergenic
ATTGCTGAGGAATAGTTAAG+TGG 0.559252 4_1:+80164465 Msa0576090:exon
CCATTGAGTATGAGAGGAGG+CGG 0.559407 4_1:-80159895 None:intergenic
CGTCGACGTCGTCATCGTCA+TGG 0.560305 4_1:+80159126 Msa0576090:CDS
CAATAATAATAGGGTCCCGT+GGG 0.560312 4_1:+80158989 None:intergenic
TGCAACAAGTTCAATTGCAA+TGG 0.561134 4_1:+80159055 Msa0576090:CDS
ACAATATCAACAAGTGGAGT+GGG 0.564196 4_1:+80159083 Msa0576090:CDS
CAAGTTCAAGGTGGTGAGTG+TGG 0.564880 4_1:-80159833 None:intergenic
GTGTTTCCATTGAGTATGAG+AGG 0.568931 4_1:-80159901 None:intergenic
AGTTGGCGACCAAATTATCT+GGG 0.569130 4_1:+80160151 Msa0576090:intron
AAGGAAGTTGTGGGAAAATG+AGG 0.569611 4_1:+80159021 Msa0576090:CDS
GATGCCCGTTCAACATTAAG+GGG 0.571402 4_1:+80159738 Msa0576090:CDS
GGCATTTGGAACAGGCTTTG+GGG 0.578419 4_1:+80163932 Msa0576090:intron
AGTTGAAGTGTAAAAGGTGG+AGG 0.580876 4_1:-80159863 None:intergenic
ATGAGAGGAGGCGGATACAT+GGG 0.581449 4_1:-80159886 None:intergenic
GATCTTGTCATTCAAATGCT+GGG 0.582985 4_1:+80163968 Msa0576090:CDS
AATTTCAGACAACTCGGAGT+CGG 0.583858 4_1:-80159476 None:intergenic
AAAATCATATCAAGTCCGGC+AGG 0.584858 4_1:-80164073 None:intergenic
TGTAGAAGCTGCTAACTACC+AGG 0.586026 4_1:+80160182 Msa0576090:CDS
GGGAGTTGAAGTGTAAAAGG+TGG 0.591753 4_1:-80159866 None:intergenic
TTCCTTCCATACATCCCCAC+GGG 0.599538 4_1:-80159004 None:intergenic
CGAGAGTCTCAATAAAGTGA+TGG 0.599920 4_1:-80159689 None:intergenic
GTGTGGAGTTGGGTTGAGCA+AGG 0.600313 4_1:-80159816 None:intergenic
ACAATAATAATAGGGTCCCG+TGG 0.604492 4_1:+80158988 None:intergenic
AGTTTGAATTTCAGACAACT+CGG 0.606591 4_1:-80159482 None:intergenic
GTGGTGATTGTGGAATATGT+TGG 0.607223 4_1:+80164500 Msa0576090:three_prime_UTR
TAATTCAGCCGCAAAAGAGT+AGG 0.607873 4_1:-80164642 None:intergenic
GAATGTGATGAAGAAGAAGA+AGG 0.610200 4_1:+80159357 Msa0576090:CDS
TAAGTGGTTCCTTTCAAGGG+TGG 0.611578 4_1:+80164481 Msa0576090:three_prime_UTR
GCAATTACAATATCAACAAG+TGG 0.613866 4_1:+80159077 Msa0576090:CDS
ATGTCATGTTCAATCATGGA+TGG 0.618233 4_1:-80159657 None:intergenic
TATTCCTCAGCAATATCAGA+TGG 0.621467 4_1:-80164456 None:intergenic
TGTGGGAAAATGAGGTGGTG+TGG 0.621588 4_1:+80159029 Msa0576090:CDS
CTTCCTTCCATACATCCCCA+CGG 0.628662 4_1:-80159005 None:intergenic
ATTCGATCCTGAGCTGCGGT+CGG 0.636805 4_1:+80159438 Msa0576090:CDS
GGGAGGTGGTATATTTACGT+TGG 0.642188 4_1:+80160026 Msa0576090:intron
TTGAATTCGATCCTGAGCTG+CGG 0.651953 4_1:+80159434 Msa0576090:CDS
GCTACCATCTGATATTGCTG+AGG 0.666355 4_1:+80164452 Msa0576090:CDS
CAGATGGTAGCTTGTACGTG+CGG 0.681966 4_1:-80164440 None:intergenic
GGAATATTTCAAGTTCAAGG+TGG 0.696502 4_1:-80159842 None:intergenic
TTTCCATTGAGTATGAGAGG+AGG 0.701392 4_1:-80159898 None:intergenic
GAAGTTGTGGGAAAATGAGG+TGG 0.705816 4_1:+80159024 Msa0576090:CDS
GAAGGACGAAGACGACAACA+GGG 0.708540 4_1:+80159409 Msa0576090:CDS
AATAATAATAGGGTCCCGTG+GGG 0.731104 4_1:+80158990 None:intergenic
GTCGACGACGACGAAGACGT+AGG 0.738238 4_1:-80159110 None:intergenic
TTGAACGGGCATCAGCAGCG+AGG 0.739247 4_1:-80159728 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTGAATAAATAAAAGA+GGG - chr4_1:80160083-80160102 None:intergenic 10.0%
!! ATATATTGAATAAATAAAAG+AGG - chr4_1:80160084-80160103 None:intergenic 10.0%
!! AAATTTAAACTCATTAAATT+TGG - chr4_1:80160566-80160585 None:intergenic 10.0%
!! ACGATAAAATAAAAATTAAA+TGG - chr4_1:80161336-80161355 None:intergenic 10.0%
!!! TATGAAAATTTAAAATCAAA+AGG - chr4_1:80164327-80164346 None:intergenic 10.0%
!! ATTTGTAAATATGTTAATAT+TGG + chr4_1:80164603-80164622 Msa0576090:three_prime_UTR 10.0%
! GGGGGGGGGGGGGGGGGGGG+TGG - chr4_1:80164152-80164171 None:intergenic 100.0%
!! TAGATTCAGAAATAATAAAT+TGG - chr4_1:80160717-80160736 None:intergenic 15.0%
!!! AAGATAAGAATAATGATTTT+TGG + chr4_1:80160799-80160818 Msa0576090:intron 15.0%
!!! AGATAAGAATAATGATTTTT+GGG + chr4_1:80160800-80160819 Msa0576090:intron 15.0%
!! AAATGAAAATATTAAAGAGA+GGG + chr4_1:80161951-80161970 Msa0576090:intron 15.0%
!! AAACTATAAGAAAAACTATT+AGG + chr4_1:80162123-80162142 Msa0576090:intron 15.0%
!!! AAATTTTATAGTCTCTTTTA+TGG - chr4_1:80162916-80162935 None:intergenic 15.0%
!!! AAAAGAGACTATAAAATTTT+CGG + chr4_1:80162917-80162936 Msa0576090:intron 15.0%
!!! ATTAATTCTTTTCAATTCTT+GGG + chr4_1:80163580-80163599 Msa0576090:intron 15.0%
!!! AAGATAATTATTTAACTTTG+AGG + chr4_1:80164217-80164236 Msa0576090:intron 15.0%
!!! TTTGAGGTAAAATATTATAT+TGG + chr4_1:80164233-80164252 Msa0576090:intron 15.0%
!!! ATATTTACAAATTTTAAGTG+TGG - chr4_1:80164595-80164614 None:intergenic 15.0%
!! CAATTAAATTGAATTGAATG+AGG - chr4_1:80159287-80159306 None:intergenic 20.0%
!! TTCCTTTATTATCATATGTA+TGG - chr4_1:80159311-80159330 None:intergenic 20.0%
!! AGAAAAGATGAGTTAAAATT+GGG - chr4_1:80159995-80160014 None:intergenic 20.0%
!! AAGAAAAGATGAGTTAAAAT+TGG - chr4_1:80159996-80160015 None:intergenic 20.0%
!! TTGTTGTCAATTTAATTCAA+AGG + chr4_1:80160409-80160428 Msa0576090:intron 20.0%
!!! AAGTTGAAGTTCTAAAATAT+TGG - chr4_1:80160523-80160542 None:intergenic 20.0%
!! TTATTCCATATGTAAATACA+TGG + chr4_1:80160686-80160705 Msa0576090:intron 20.0%
!! TCCTTTAATTGAATAACAAA+TGG + chr4_1:80161096-80161115 Msa0576090:intron 20.0%
!!! TCCATTTGTTATTCAATTAA+AGG - chr4_1:80161100-80161119 None:intergenic 20.0%
!! TCTCTTCATTATATACAATA+GGG - chr4_1:80161394-80161413 None:intergenic 20.0%
!!! TTAAAACAATTCAAGTTGAA+GGG + chr4_1:80161782-80161801 Msa0576090:intron 20.0%
!! GAAATGAAAATATTAAAGAG+AGG + chr4_1:80161950-80161969 Msa0576090:intron 20.0%
!!! GTTTTTCTTATAGTTTTTCT+AGG - chr4_1:80162119-80162138 None:intergenic 20.0%
!!! TCTATCATAAACCATATTTT+GGG - chr4_1:80162175-80162194 None:intergenic 20.0%
!!! TTCTATCATAAACCATATTT+TGG - chr4_1:80162176-80162195 None:intergenic 20.0%
!! ATATTGTATATAAACCCTAA+AGG - chr4_1:80163075-80163094 None:intergenic 20.0%
!!! TTTAGGGTTTATATACAATA+TGG + chr4_1:80163074-80163093 Msa0576090:intron 20.0%
!! TAACACAATCCAAATTAAAT+AGG - chr4_1:80163324-80163343 None:intergenic 20.0%
!!! TATTTAATTTGGATTGTGTT+AGG + chr4_1:80163323-80163342 Msa0576090:intron 20.0%
!! TAGGATTATCATGTATAAAT+AGG + chr4_1:80163412-80163431 Msa0576090:intron 20.0%
!! AGGATTATCATGTATAAATA+GGG + chr4_1:80163413-80163432 Msa0576090:intron 20.0%
!! TTGAGAAAATAAGAAAGAAT+AGG - chr4_1:80163545-80163564 None:intergenic 20.0%
!!! CATTAATTCTTTTCAATTCT+TGG + chr4_1:80163579-80163598 Msa0576090:intron 20.0%
!! ACAAATAAAAAATGGTTTAC+TGG - chr4_1:80163666-80163685 None:intergenic 20.0%
!! TATGGTACACAAATAAAAAA+TGG - chr4_1:80163674-80163693 None:intergenic 20.0%
!!! TTTTTTATTTGTGTACCATA+TGG + chr4_1:80163674-80163693 Msa0576090:intron 20.0%
!! TAAAATAAAAAATGCTCCAT+CGG - chr4_1:80163726-80163745 None:intergenic 20.0%
!! CGGAAAAAAAATATGATAAA+CGG - chr4_1:80163804-80163823 None:intergenic 20.0%
!!! CGTTTATCATATTTTTTTTC+CGG + chr4_1:80163802-80163821 Msa0576090:intron 20.0%
!!! TCATGTTTTATTATTGTTTG+TGG + chr4_1:80163876-80163895 Msa0576090:intron 20.0%
!! ATAATTATCTTATGTTTGAG+AGG - chr4_1:80164208-80164227 None:intergenic 20.0%
! GTCCATACATATGATAATAA+AGG + chr4_1:80159306-80159325 Msa0576090:intron 25.0%
! TGATAATAAAGGAACTAGTT+TGG + chr4_1:80159317-80159336 Msa0576090:intron 25.0%
!! GAAATTCAAACTATCCTTTT+CGG + chr4_1:80159493-80159512 Msa0576090:CDS 25.0%
! GAATATTCAATTTAGAGGTT+AGG - chr4_1:80159797-80159816 None:intergenic 25.0%
!! CTTTCAATCTATTCTTTTCA+AGG + chr4_1:80159923-80159942 Msa0576090:CDS 25.0%
! TAAGAAAGAGTTATTGAAGA+AGG + chr4_1:80160206-80160225 Msa0576090:CDS 25.0%
!! TTATTGAAGAAGGTATACAT+GGG + chr4_1:80160216-80160235 Msa0576090:intron 25.0%
! AAGTTATTGTTGAGAAAGAT+TGG - chr4_1:80160268-80160287 None:intergenic 25.0%
!! ATTTTACACATATGATTTCC+AGG + chr4_1:80160296-80160315 Msa0576090:intron 25.0%
!! TTTTACACATATGATTTCCA+GGG + chr4_1:80160297-80160316 Msa0576090:intron 25.0%
!!! TTCAAAGGAATGTATTTTAG+CGG + chr4_1:80160424-80160443 Msa0576090:intron 25.0%
! TTAGCATCAATTTCTTTACA+TGG + chr4_1:80160641-80160660 Msa0576090:intron 25.0%
! TTAATCTTTATACTGCTGTT+TGG + chr4_1:80160744-80160763 Msa0576090:intron 25.0%
! TTCTGATATGAAAGAAAAAC+AGG + chr4_1:80160767-80160786 Msa0576090:intron 25.0%
! TCTGATATGAAAGAAAAACA+GGG + chr4_1:80160768-80160787 Msa0576090:intron 25.0%
! AAGTCATTAAAACAAGATGT+AGG - chr4_1:80161038-80161057 None:intergenic 25.0%
! TAATTGAATAACAAATGGAG+AGG + chr4_1:80161101-80161120 Msa0576090:intron 25.0%
! AATTGAATAACAAATGGAGA+GGG + chr4_1:80161102-80161121 Msa0576090:intron 25.0%
!! TTTTCTTCATTCCTAAACAT+AGG + chr4_1:80161356-80161375 Msa0576090:intron 25.0%
! CTCTCTTCATTATATACAAT+AGG - chr4_1:80161395-80161414 None:intergenic 25.0%
! CTATTGTATATAATGAAGAG+AGG + chr4_1:80161393-80161412 Msa0576090:intron 25.0%
! AGAAAAGAAATTATGTCGAT+AGG - chr4_1:80161486-80161505 None:intergenic 25.0%
!!! TGAATTGTTTTAACTTGAGA+AGG - chr4_1:80161775-80161794 None:intergenic 25.0%
!!! GTTAAAACAATTCAAGTTGA+AGG + chr4_1:80161781-80161800 Msa0576090:intron 25.0%
!!! TAAAACAATTCAAGTTGAAG+GGG + chr4_1:80161783-80161802 Msa0576090:intron 25.0%
!!! TGCTTATTTTATTTTCGTGT+TGG - chr4_1:80161874-80161893 None:intergenic 25.0%
! CGAAAATAAAATAAGCATAG+CGG + chr4_1:80161877-80161896 Msa0576090:intron 25.0%
! AAAATAAGCTTAGATGGTTT+GGG + chr4_1:80162009-80162028 Msa0576090:intron 25.0%
! AAAAACTATTAGGAAAGACT+TGG + chr4_1:80162133-80162152 Msa0576090:intron 25.0%
! ATCTTGACAAGACAAATTTA+GGG - chr4_1:80162837-80162856 None:intergenic 25.0%
!! TATAAAATTTTCGGCATAAC+TGG + chr4_1:80162926-80162945 Msa0576090:intron 25.0%
! AGAAAATAAGAAAGAATAGG+AGG - chr4_1:80163542-80163561 None:intergenic 25.0%
!!! GTATTTCTGATCGTTTTATT+TGG + chr4_1:80163911-80163930 Msa0576090:intron 25.0%
! AAAGAAAATCATATCAAGTC+CGG - chr4_1:80164080-80164099 None:intergenic 25.0%
!! CTTCTTTGGTGATTTATTTA+GGG + chr4_1:80164108-80164127 Msa0576090:CDS 25.0%
! AAATTTGAAAGAGATACAGA+GGG - chr4_1:80164184-80164203 None:intergenic 25.0%
!!! CACTGATTCTATCATAAAAT+AGG - chr4_1:80164304-80164323 None:intergenic 25.0%
! AAAAACCAATAAATCTTCAG+AGG - chr4_1:80164674-80164693 None:intergenic 25.0%
GCAATTACAATATCAACAAG+TGG + chr4_1:80159077-80159096 Msa0576090:CDS 30.0%
! TTGTTGTTGTTGTTGTTACT+GGG - chr4_1:80159199-80159218 None:intergenic 30.0%
AACAACAACAACAACAACAA+CGG + chr4_1:80159202-80159221 Msa0576090:CDS 30.0%
AGTTTGAATTTCAGACAACT+CGG - chr4_1:80159485-80159504 None:intergenic 30.0%
! CTTGTGATTGATTTAAGCAA+AGG - chr4_1:80159618-80159637 None:intergenic 30.0%
TTGAATGTCATGTTCAATCA+TGG - chr4_1:80159664-80159683 None:intergenic 30.0%
GCAAGGAATATTCAATTTAG+AGG - chr4_1:80159802-80159821 None:intergenic 30.0%
! AAGCATTTTCCCAGATAATT+TGG - chr4_1:80160163-80160182 None:intergenic 30.0%
TCAATAACTCTTTCTTAACC+TGG - chr4_1:80160203-80160222 None:intergenic 30.0%
! GTTATTGAAGAAGGTATACA+TGG + chr4_1:80160215-80160234 Msa0576090:intron 30.0%
! AAGAAGCATATGAAATTGTG+CGG - chr4_1:80160389-80160408 None:intergenic 30.0%
TTCCAGATCGATAGATAAAA+CGG + chr4_1:80160465-80160484 Msa0576090:intron 30.0%
! AATTTCTTTACATGGTGTTG+TGG + chr4_1:80160649-80160668 Msa0576090:intron 30.0%
CTGAACCATGTATTTACATA+TGG - chr4_1:80160694-80160713 None:intergenic 30.0%
ATTGAATAACAAATGGAGAG+GGG + chr4_1:80161103-80161122 Msa0576090:intron 30.0%
ATCATGAGAATGTGTAATCA+TGG + chr4_1:80161167-80161186 Msa0576090:intron 30.0%
TCATGAGAATGTGTAATCAT+GGG + chr4_1:80161168-80161187 Msa0576090:intron 30.0%
GTGAATTACAGAGAACAAAA+TGG - chr4_1:80161290-80161309 None:intergenic 30.0%
TTTCTATGTTCAATCACTGA+AGG - chr4_1:80161572-80161591 None:intergenic 30.0%
AAAAATGCTGCAGTGAAATA+TGG + chr4_1:80161604-80161623 Msa0576090:intron 30.0%
TGGCATTTCTTTGTCTAATT+TGG + chr4_1:80161624-80161643 Msa0576090:intron 30.0%
AAATATTAAAGAGAGGGAGT+TGG + chr4_1:80161957-80161976 Msa0576090:intron 30.0%
AATATTAAAGAGAGGGAGTT+GGG + chr4_1:80161958-80161977 Msa0576090:intron 30.0%
ACCTATAGTAGAAAAGATGA+TGG + chr4_1:80161986-80162005 Msa0576090:intron 30.0%
! TCCATCATCTTTTCTACTAT+AGG - chr4_1:80161990-80162009 None:intergenic 30.0%
TGATGGAAAATAAGCTTAGA+TGG + chr4_1:80162003-80162022 Msa0576090:intron 30.0%
GAAAATAAGCTTAGATGGTT+TGG + chr4_1:80162008-80162027 Msa0576090:intron 30.0%
TCACTAGAGAGAAACTATTA+TGG + chr4_1:80162231-80162250 Msa0576090:intron 30.0%
ACTTGAGAAGCAAGAAAAAA+TGG - chr4_1:80162352-80162371 None:intergenic 30.0%
TAATACCAATGGGGTAAATT+TGG + chr4_1:80162494-80162513 Msa0576090:intron 30.0%
!! GTTGTTCTTGATAATGTCAA+TGG - chr4_1:80162583-80162602 None:intergenic 30.0%
TAGAATTAAGTCGAGTAGTA+GGG - chr4_1:80162634-80162653 None:intergenic 30.0%
ATAGAATTAAGTCGAGTAGT+AGG - chr4_1:80162635-80162654 None:intergenic 30.0%
GATCTTGACAAGACAAATTT+AGG - chr4_1:80162838-80162857 None:intergenic 30.0%
ATTGATGTCTTTACCTATGA+AGG + chr4_1:80162874-80162893 Msa0576090:intron 30.0%
TTGATGTCTTTACCTATGAA+GGG + chr4_1:80162875-80162894 Msa0576090:intron 30.0%
TATAAACCCTAAAGGTTAGA+GGG - chr4_1:80163067-80163086 None:intergenic 30.0%
ATATAAACCCTAAAGGTTAG+AGG - chr4_1:80163068-80163087 None:intergenic 30.0%
TTTGGATTGTGTTAGGATAT+AGG + chr4_1:80163330-80163349 Msa0576090:intron 30.0%
! AGGATAAAGATGAGTTTGTT+AGG + chr4_1:80163350-80163369 Msa0576090:intron 30.0%
!! AAGATGAGTTTGTTAGGATA+TGG + chr4_1:80163356-80163375 Msa0576090:intron 30.0%
TAGGGAAGTTGTTAGTTAAT+GGG + chr4_1:80163384-80163403 Msa0576090:intron 30.0%
! ATAAATAGGGAGATTTTGTG+TGG + chr4_1:80163426-80163445 Msa0576090:intron 30.0%
TCTGTAGATCTAATGTGTTA+TGG + chr4_1:80163629-80163648 Msa0576090:intron 30.0%
CATGAAGAGAAATAAAAGCA+AGG - chr4_1:80163702-80163721 None:intergenic 30.0%
ATCTTAATGGTACAAAGTAC+CGG - chr4_1:80163824-80163843 None:intergenic 30.0%
TTGCAGATGACAAATCTTAA+TGG - chr4_1:80163837-80163856 None:intergenic 30.0%
ATAAAACATGAGAGCAAAGA+GGG - chr4_1:80163867-80163886 None:intergenic 30.0%
AATAAAACATGAGAGCAAAG+AGG - chr4_1:80163868-80163887 None:intergenic 30.0%
!!! TGATCGTTTTATTTGGCATT+TGG + chr4_1:80163918-80163937 Msa0576090:intron 30.0%
!! TTTTATTTGGCATTTGGAAC+AGG + chr4_1:80163924-80163943 Msa0576090:intron 30.0%
! AACAATTTATGCTTTAGCTC+AGG + chr4_1:80164015-80164034 Msa0576090:CDS 30.0%
! GCTTCTTTGGTGATTTATTT+AGG + chr4_1:80164107-80164126 Msa0576090:CDS 30.0%
AATTTGAAAGAGATACAGAG+GGG - chr4_1:80164183-80164202 None:intergenic 30.0%
CAAATTTGAAAGAGATACAG+AGG - chr4_1:80164185-80164204 None:intergenic 30.0%
ATTATATTGGCATAGCTATC+TGG + chr4_1:80164246-80164265 Msa0576090:intron 30.0%
CGAAAACAAAAAACCAAAAG+TGG - chr4_1:80164403-80164422 None:intergenic 30.0%
! TCATTCCTCTGAAGATTTAT+TGG + chr4_1:80164666-80164685 Msa0576090:three_prime_UTR 30.0%
TGCAACAAGTTCAATTGCAA+TGG + chr4_1:80159055-80159074 Msa0576090:CDS 35.0%
TACAATATCAACAAGTGGAG+TGG + chr4_1:80159082-80159101 Msa0576090:CDS 35.0%
ACAATATCAACAAGTGGAGT+GGG + chr4_1:80159083-80159102 Msa0576090:CDS 35.0%
! GTTGTTGTTGTTGTTGTTAC+TGG - chr4_1:80159200-80159219 None:intergenic 35.0%
TTTGGCCATATCGCAATAAT+CGG + chr4_1:80159335-80159354 Msa0576090:CDS 35.0%
ACATTCCGATTATTGCGATA+TGG - chr4_1:80159343-80159362 None:intergenic 35.0%
GAATGTGATGAAGAAGAAGA+AGG + chr4_1:80159357-80159376 Msa0576090:CDS 35.0%
AAAAAGGCAGATGTAAGTGA+AGG + chr4_1:80159391-80159410 Msa0576090:CDS 35.0%
AGAGAGAAAAAGAAACACCT+GGG - chr4_1:80159520-80159539 None:intergenic 35.0%
TAGAGAGAAAAAGAAACACC+TGG - chr4_1:80159521-80159540 None:intergenic 35.0%
ATGTCATGTTCAATCATGGA+TGG - chr4_1:80159660-80159679 None:intergenic 35.0%
AGCAAGACATTTCTGTAAGA+AGG - chr4_1:80159771-80159790 None:intergenic 35.0%
!! GGAATATTTCAAGTTCAAGG+TGG - chr4_1:80159845-80159864 None:intergenic 35.0%
!! GGAGGAATATTTCAAGTTCA+AGG - chr4_1:80159848-80159867 None:intergenic 35.0%
GTTGGCGAAGATATATCAAT+TGG + chr4_1:80160044-80160063 Msa0576090:CDS 35.0%
ACCATATGATCACTTGTAGT+TGG + chr4_1:80160134-80160153 Msa0576090:intron 35.0%
! ATCCGTTTTATCTATCGATC+TGG - chr4_1:80160470-80160489 None:intergenic 35.0%
! ACATATTACAATGAGGTGCT+AGG - chr4_1:80160603-80160622 None:intergenic 35.0%
TAGCACCTCATTGTAATATG+TGG + chr4_1:80160602-80160621 Msa0576090:intron 35.0%
AGCACCTCATTGTAATATGT+GGG + chr4_1:80160603-80160622 Msa0576090:intron 35.0%
TACTCCCACATATTACAATG+AGG - chr4_1:80160610-80160629 None:intergenic 35.0%
TCTGATGTTTGATCTGTTGT+AGG + chr4_1:80160942-80160961 Msa0576090:intron 35.0%
CTGATGTTTGATCTGTTGTA+GGG + chr4_1:80160943-80160962 Msa0576090:intron 35.0%
TTGAATAACAAATGGAGAGG+GGG + chr4_1:80161104-80161123 Msa0576090:intron 35.0%
CATGAGAATGTGTAATCATG+GGG + chr4_1:80161169-80161188 Msa0576090:intron 35.0%
TCATTCCTAAACATAGGAAG+AGG + chr4_1:80161362-80161381 Msa0576090:intron 35.0%
TATGTCCTCTTCCTATGTTT+AGG - chr4_1:80161370-80161389 None:intergenic 35.0%
CGAAATAATTCTGCAAGAAC+TGG - chr4_1:80161433-80161452 None:intergenic 35.0%
!! CTTATCTCTTATTTCTGTGC+TGG + chr4_1:80161458-80161477 Msa0576090:intron 35.0%
TTCAATCACTGAAGGAACAT+AGG - chr4_1:80161564-80161583 None:intergenic 35.0%
CAGTGATTGAACATAGAAAG+TGG + chr4_1:80161573-80161592 Msa0576090:intron 35.0%
ATTCAAGTAGCAGCAGAAAA+GGG - chr4_1:80161653-80161672 None:intergenic 35.0%
TTGAAAGTGGGGAATAAGAA+AGG + chr4_1:80161717-80161736 Msa0576090:intron 35.0%
! GTAAGACTGATGATGTTGTA+TGG + chr4_1:80161824-80161843 Msa0576090:intron 35.0%
TGTTGTATGGAACATAGTGT+TGG + chr4_1:80161837-80161856 Msa0576090:intron 35.0%
GTTGTATGGAACATAGTGTT+GGG + chr4_1:80161838-80161857 Msa0576090:intron 35.0%
ATATTAAAGAGAGGGAGTTG+GGG + chr4_1:80161959-80161978 Msa0576090:intron 35.0%
AAAGAGAAGACCTCTAGATT+CGG + chr4_1:80162037-80162056 Msa0576090:intron 35.0%
AGTAAGCAGAGTAGATTAGA+TGG + chr4_1:80162061-80162080 Msa0576090:intron 35.0%
AGACTTGGAGATTAATGAGT+TGG + chr4_1:80162148-80162167 Msa0576090:intron 35.0%
! AATGAGTTGGACCCAAAATA+TGG + chr4_1:80162161-80162180 Msa0576090:intron 35.0%
CTGAGTTAATGTTGTGTTCT+GGG + chr4_1:80162383-80162402 Msa0576090:intron 35.0%
TGAGTTAATGTTGTGTTCTG+GGG + chr4_1:80162384-80162403 Msa0576090:intron 35.0%
!! TTGTGTTCTGGGGTAAAAAA+GGG + chr4_1:80162394-80162413 Msa0576090:intron 35.0%
AGTTGGCAACTAATACCAAT+GGG + chr4_1:80162484-80162503 Msa0576090:intron 35.0%
AGAATTAAGTCGAGTAGTAG+GGG - chr4_1:80162633-80162652 None:intergenic 35.0%
CATTTAAGGAGAGGAAGAAA+CGG - chr4_1:80162708-80162727 None:intergenic 35.0%
! CTTAAATGTAACCCCCTTTT+GGG + chr4_1:80162720-80162739 Msa0576090:intron 35.0%
GGAAAATGTTGAGACGAAAA+TGG - chr4_1:80162786-80162805 None:intergenic 35.0%
ATCAATGTTGTCGTCATCAT+TGG - chr4_1:80162860-80162879 None:intergenic 35.0%
TTGGGTATATTTGTACTTGC+AGG + chr4_1:80162962-80162981 Msa0576090:intron 35.0%
AAATTAAATAGGTGCACCAG+GGG - chr4_1:80163313-80163332 None:intergenic 35.0%
CAAATTAAATAGGTGCACCA+GGG - chr4_1:80163314-80163333 None:intergenic 35.0%
!! GAGTTTGTTAGGATATGGTA+AGG + chr4_1:80163361-80163380 Msa0576090:intron 35.0%
TTGTTAGGATATGGTAAGGT+AGG + chr4_1:80163365-80163384 Msa0576090:intron 35.0%
TGTTAGGATATGGTAAGGTA+GGG + chr4_1:80163366-80163385 Msa0576090:intron 35.0%
GTAGGGAAGTTGTTAGTTAA+TGG + chr4_1:80163383-80163402 Msa0576090:intron 35.0%
AGGGAAGTTGTTAGTTAATG+GGG + chr4_1:80163385-80163404 Msa0576090:intron 35.0%
TGTTAGTTAATGGGGTAGTT+AGG + chr4_1:80163393-80163412 Msa0576090:intron 35.0%
CAATGACTCTATTGTAGAGA+GGG + chr4_1:80163492-80163511 Msa0576090:intron 35.0%
AATGACTCTATTGTAGAGAG+GGG + chr4_1:80163493-80163512 Msa0576090:intron 35.0%
! AATAAAAGCAAGGCACCATA+TGG - chr4_1:80163692-80163711 None:intergenic 35.0%
! TTATTTCTCTTCATGTCCGA+TGG + chr4_1:80163707-80163726 Msa0576090:intron 35.0%
TGATCTTGTCATTCAAATGC+TGG + chr4_1:80163967-80163986 Msa0576090:CDS 35.0%
GATCTTGTCATTCAAATGCT+GGG + chr4_1:80163968-80163987 Msa0576090:CDS 35.0%
TTCTTTGTGTTGTGCTTCTT+TGG + chr4_1:80164094-80164113 Msa0576090:CDS 35.0%
! TGATTTATTTAGGGCACTTG+TGG + chr4_1:80164117-80164136 Msa0576090:CDS 35.0%
ATTTGAAAGAGATACAGAGG+GGG - chr4_1:80164182-80164201 None:intergenic 35.0%
TATTCCTCAGCAATATCAGA+TGG - chr4_1:80164459-80164478 None:intergenic 35.0%
ATTGCTGAGGAATAGTTAAG+TGG + chr4_1:80164465-80164484 Msa0576090:exon 35.0%
TAGTTAAGTGGTTCCTTTCA+AGG + chr4_1:80164477-80164496 Msa0576090:exon 35.0%
AGTTAAGTGGTTCCTTTCAA+GGG + chr4_1:80164478-80164497 Msa0576090:exon 35.0%
TTTGAGCTCGTTGAAAACTT+TGG + chr4_1:80164525-80164544 Msa0576090:three_prime_UTR 35.0%
! GTTGAAAACTTTGGAGGATA+GGG + chr4_1:80164534-80164553 Msa0576090:three_prime_UTR 35.0%
! TCTTTATGCCTACTCTTTTG+CGG + chr4_1:80164634-80164653 Msa0576090:three_prime_UTR 35.0%
GATGTATGGAAGGAAGTTGT+GGG + chr4_1:80159012-80159031 Msa0576090:exon 40.0%
AAGGAAGTTGTGGGAAAATG+AGG + chr4_1:80159021-80159040 Msa0576090:CDS 40.0%
!!! GGTTTTGCTGTTGTTGGAAA+TGG + chr4_1:80159147-80159166 Msa0576090:CDS 40.0%
AATTTCAGACAACTCGGAGT+CGG - chr4_1:80159479-80159498 None:intergenic 40.0%
GAGAGAAAAAGAAACACCTG+GGG - chr4_1:80159519-80159538 None:intergenic 40.0%
CACAAGTGCATCAAGTAACA+TGG + chr4_1:80159632-80159651 Msa0576090:CDS 40.0%
CGAGAGTCTCAATAAAGTGA+TGG - chr4_1:80159692-80159711 None:intergenic 40.0%
TGATGCCCGTTCAACATTAA+GGG + chr4_1:80159737-80159756 Msa0576090:CDS 40.0%
TCCAACCCCTTAATGTTGAA+CGG - chr4_1:80159746-80159765 None:intergenic 40.0%
AGTTGAAGTGTAAAAGGTGG+AGG - chr4_1:80159866-80159885 None:intergenic 40.0%
CATGGGAGTTGAAGTGTAAA+AGG - chr4_1:80159872-80159891 None:intergenic 40.0%
TTTCCATTGAGTATGAGAGG+AGG - chr4_1:80159901-80159920 None:intergenic 40.0%
GTGTTTCCATTGAGTATGAG+AGG - chr4_1:80159904-80159923 None:intergenic 40.0%
! ATCTTTTCTTTCCATCCCCA+GGG + chr4_1:80160006-80160025 Msa0576090:intron 40.0%
GCCAACTACAAGTGATCATA+TGG - chr4_1:80160138-80160157 None:intergenic 40.0%
TAGTTGGCGACCAAATTATC+TGG + chr4_1:80160150-80160169 Msa0576090:intron 40.0%
AGTTGGCGACCAAATTATCT+GGG + chr4_1:80160151-80160170 Msa0576090:intron 40.0%
TACACATATGATTTCCAGGG+TGG + chr4_1:80160300-80160319 Msa0576090:intron 40.0%
ACACATATGATTTCCAGGGT+GGG + chr4_1:80160301-80160320 Msa0576090:intron 40.0%
GCATATGAAATTGTGCGGTA+AGG - chr4_1:80160384-80160403 None:intergenic 40.0%
!! TTACATGGTGTTGTGGACAA+AGG + chr4_1:80160656-80160675 Msa0576090:intron 40.0%
!! TACATGGTGTTGTGGACAAA+GGG + chr4_1:80160657-80160676 Msa0576090:intron 40.0%
! GATCTGTTGTAGGGTTTTCT+TGG + chr4_1:80160952-80160971 Msa0576090:intron 40.0%
! AGAAGCATGCTCACATTACT+TGG + chr4_1:80161000-80161019 Msa0576090:CDS 40.0%
ACAAGATGTAGGACATACAC+AGG - chr4_1:80161027-80161046 None:intergenic 40.0%
TGAATAACAAATGGAGAGGG+GGG + chr4_1:80161105-80161124 Msa0576090:intron 40.0%
AGAATGTGTAATCATGGGGT+AGG + chr4_1:80161173-80161192 Msa0576090:intron 40.0%
GAATGTGTAATCATGGGGTA+GGG + chr4_1:80161174-80161193 Msa0576090:intron 40.0%
! AACCGTAAGAGGGTAGTTTT+TGG + chr4_1:80161198-80161217 Msa0576090:intron 40.0%
TGCCAAAAACTACCCTCTTA+CGG - chr4_1:80161203-80161222 None:intergenic 40.0%
!!! AGGGTAGTTTTTGGCATCTT+AGG + chr4_1:80161207-80161226 Msa0576090:intron 40.0%
!!! GTTTTTGGCATCTTAGGTCT+CGG + chr4_1:80161213-80161232 Msa0576090:intron 40.0%
!! TTTTTGGCATCTTAGGTCTC+GGG + chr4_1:80161214-80161233 Msa0576090:intron 40.0%
GTGGATCTGATTCTTCTCTT+AGG + chr4_1:80161250-80161269 Msa0576090:intron 40.0%
CTCTGTAATTCACTTCTGCA+AGG + chr4_1:80161297-80161316 Msa0576090:intron 40.0%
! CACTGCAGCATTTTTCTTCA+AGG - chr4_1:80161599-80161618 None:intergenic 40.0%
TTCAAGTAGCAGCAGAAAAG+GGG - chr4_1:80161652-80161671 None:intergenic 40.0%
GATTCAAGTAGCAGCAGAAA+AGG - chr4_1:80161654-80161673 None:intergenic 40.0%
! CAGACTCTGATTTTCTCACT+TGG + chr4_1:80161673-80161692 Msa0576090:intron 40.0%
CTCACTTGGTTGAACAGAAA+CGG + chr4_1:80161687-80161706 Msa0576090:intron 40.0%
TCACTTGGTTGAACAGAAAC+GGG + chr4_1:80161688-80161707 Msa0576090:intron 40.0%
!! AAACGGGCAACTTTTGAAAG+TGG + chr4_1:80161704-80161723 Msa0576090:intron 40.0%
!! AACGGGCAACTTTTGAAAGT+GGG + chr4_1:80161705-80161724 Msa0576090:intron 40.0%
AGAATGTTTCGTTGGATGTG+TGG + chr4_1:80161905-80161924 Msa0576090:intron 40.0%
GATGTGTGGTAAGACTAGAT+GGG + chr4_1:80161919-80161938 Msa0576090:intron 40.0%
GCAGATAGTCAAATCACTAG+AGG + chr4_1:80162083-80162102 Msa0576090:intron 40.0%
TGATAGAACAGTCAAGTGCT+TGG + chr4_1:80162188-80162207 Msa0576090:intron 40.0%
GCTGAGTTAATGTTGTGTTC+TGG + chr4_1:80162382-80162401 Msa0576090:intron 40.0%
!! GTTGTGTTCTGGGGTAAAAA+AGG + chr4_1:80162393-80162412 Msa0576090:intron 40.0%
TTAGTTGCCAACTGTAGACT+GGG - chr4_1:80162477-80162496 None:intergenic 40.0%
ATTAGTTGCCAACTGTAGAC+TGG - chr4_1:80162478-80162497 None:intergenic 40.0%
CAGTTGGCAACTAATACCAA+TGG + chr4_1:80162483-80162502 Msa0576090:intron 40.0%
GTTGGCAACTAATACCAATG+GGG + chr4_1:80162485-80162504 Msa0576090:intron 40.0%
! ATGTCAATGGTGTCAGAGTT+GGG - chr4_1:80162570-80162589 None:intergenic 40.0%
! AATGTCAATGGTGTCAGAGT+TGG - chr4_1:80162571-80162590 None:intergenic 40.0%
! CAATGATGATGTTGAGTCAC+TGG - chr4_1:80162607-80162626 None:intergenic 40.0%
CCAAAAGGGGGTTACATTTA+AGG - chr4_1:80162722-80162741 None:intergenic 40.0%
! CCTTAAATGTAACCCCCTTT+TGG + chr4_1:80162719-80162738 Msa0576090:intron 40.0%
!! ATAATAATAGCAGGTGTCGG+TGG - chr4_1:80162755-80162774 None:intergenic 40.0%
GGCATAATAATAGCAGGTGT+CGG - chr4_1:80162758-80162777 None:intergenic 40.0%
GAAGCAGGCATAATAATAGC+AGG - chr4_1:80162764-80162783 None:intergenic 40.0%
TGATGATACTCTCCCTTCAT+AGG - chr4_1:80162890-80162909 None:intergenic 40.0%
AACCGTGAATGTCATGATTG+TGG + chr4_1:80163022-80163041 Msa0576090:intron 40.0%
CACCACAATCATGACATTCA+CGG - chr4_1:80163027-80163046 None:intergenic 40.0%
TTGTGGTGTGAGAACATGTT+TGG + chr4_1:80163039-80163058 Msa0576090:intron 40.0%
! TTTGGAACCCTCTAACCTTT+AGG + chr4_1:80163057-80163076 Msa0576090:intron 40.0%
TTGGAACCCTCTAACCTTTA+GGG + chr4_1:80163058-80163077 Msa0576090:intron 40.0%
CCAAATTAAATAGGTGCACC+AGG - chr4_1:80163315-80163334 None:intergenic 40.0%
CCTGGTGCACCTATTTAATT+TGG + chr4_1:80163312-80163331 Msa0576090:intron 40.0%
! GATTTTGTGTGGAGAAAGGA+AGG + chr4_1:80163437-80163456 Msa0576090:intron 40.0%
GCAATGACTCTATTGTAGAG+AGG + chr4_1:80163491-80163510 Msa0576090:intron 40.0%
ATGACTCTATTGTAGAGAGG+GGG + chr4_1:80163494-80163513 Msa0576090:intron 40.0%
! CTAAAGTCTAATTTGCCTGC+CGG + chr4_1:80164058-80164077 Msa0576090:CDS 40.0%
AAAATCATATCAAGTCCGGC+AGG - chr4_1:80164076-80164095 None:intergenic 40.0%
TTTGAAAGAGATACAGAGGG+GGG - chr4_1:80164181-80164200 None:intergenic 40.0%
! AGTTGTCTGACTTCCACTTT+TGG + chr4_1:80164387-80164406 Msa0576090:intron 40.0%
GTGGTGATTGTGGAATATGT+TGG + chr4_1:80164500-80164519 Msa0576090:three_prime_UTR 40.0%
! CGTTGAAAACTTTGGAGGAT+AGG + chr4_1:80164533-80164552 Msa0576090:three_prime_UTR 40.0%
TAATTCAGCCGCAAAAGAGT+AGG - chr4_1:80164645-80164664 None:intergenic 40.0%
GGATGTATGGAAGGAAGTTG+TGG + chr4_1:80159011-80159030 Msa0576090:exon 45.0%
GAAGTTGTGGGAAAATGAGG+TGG + chr4_1:80159024-80159043 Msa0576090:CDS 45.0%
!!! CGTCATGGTTTTGCTGTTGT+TGG + chr4_1:80159141-80159160 Msa0576090:CDS 45.0%
! CTGGGTAAGTAGTGTTGTTG+TGG - chr4_1:80159181-80159200 None:intergenic 45.0%
! GAAGGTGCGTTGTCTGAAAA+AGG + chr4_1:80159375-80159394 Msa0576090:CDS 45.0%
TTGAATTCGATCCTGAGCTG+CGG + chr4_1:80159434-80159453 Msa0576090:CDS 45.0%
CTGATGCCCGTTCAACATTA+AGG + chr4_1:80159736-80159755 Msa0576090:CDS 45.0%
GATGCCCGTTCAACATTAAG+GGG + chr4_1:80159738-80159757 Msa0576090:CDS 45.0%
CCAACCCCTTAATGTTGAAC+GGG - chr4_1:80159745-80159764 None:intergenic 45.0%
GTTCAACATTAAGGGGTTGG+AGG + chr4_1:80159745-80159764 Msa0576090:CDS 45.0%
GGGAGTTGAAGTGTAAAAGG+TGG - chr4_1:80159869-80159888 None:intergenic 45.0%
! CATCTTTTCTTTCCATCCCC+AGG + chr4_1:80160005-80160024 Msa0576090:intron 45.0%
GTAAATATACCACCTCCCTG+GGG - chr4_1:80160024-80160043 None:intergenic 45.0%
CGTAAATATACCACCTCCCT+GGG - chr4_1:80160025-80160044 None:intergenic 45.0%
ACGTAAATATACCACCTCCC+TGG - chr4_1:80160026-80160045 None:intergenic 45.0%
GGGAGGTGGTATATTTACGT+TGG + chr4_1:80160026-80160045 Msa0576090:intron 45.0%
TGTAGAAGCTGCTAACTACC+AGG + chr4_1:80160182-80160201 Msa0576090:CDS 45.0%
TGCTTTGCTTGCAGCAAAAC+AGG + chr4_1:80160356-80160375 Msa0576090:CDS 45.0%
! TGAGGTGCTAGGATGACAAA+GGG - chr4_1:80160592-80160611 None:intergenic 45.0%
! ATGAGGTGCTAGGATGACAA+AGG - chr4_1:80160593-80160612 None:intergenic 45.0%
TTCTGCAAGAACTGGAACAG+AGG - chr4_1:80161425-80161444 None:intergenic 45.0%
TCAAGTAGCAGCAGAAAAGG+GGG - chr4_1:80161651-80161670 None:intergenic 45.0%
!! ACGGGCAACTTTTGAAAGTG+GGG + chr4_1:80161706-80161725 Msa0576090:intron 45.0%
CGGAGATGAGAATGTTTCGT+TGG + chr4_1:80161897-80161916 Msa0576090:intron 45.0%
GGATGTGTGGTAAGACTAGA+TGG + chr4_1:80161918-80161937 Msa0576090:intron 45.0%
TGTGGTAAGACTAGATGGGT+AGG + chr4_1:80161923-80161942 Msa0576090:intron 45.0%
GTGGTAAGACTAGATGGGTA+GGG + chr4_1:80161924-80161943 Msa0576090:intron 45.0%
CTGCTTACTACCGAATCTAG+AGG - chr4_1:80162050-80162069 None:intergenic 45.0%
AGTCAAATCACTAGAGGCAG+AGG + chr4_1:80162089-80162108 Msa0576090:intron 45.0%
ATGTAGCCTACCCACTTAGT+GGG + chr4_1:80162267-80162286 Msa0576090:intron 45.0%
GAGGATGAGGATGAGAAAAG+GGG - chr4_1:80162437-80162456 None:intergenic 45.0%
GGAGGATGAGGATGAGAAAA+GGG - chr4_1:80162438-80162457 None:intergenic 45.0%
TGGAGGATGAGGATGAGAAA+AGG - chr4_1:80162439-80162458 None:intergenic 45.0%
GGCTTCCAAATTTACCCCAT+TGG - chr4_1:80162502-80162521 None:intergenic 45.0%
GGGTAAATTTGGAAGCCCAT+TGG + chr4_1:80162505-80162524 Msa0576090:intron 45.0%
! TGTCAATGGTGTCAGAGTTG+GGG - chr4_1:80162569-80162588 None:intergenic 45.0%
TAAAGAACGCATGCAACGAC+AGG - chr4_1:80162684-80162703 None:intergenic 45.0%
AGGGGGTTACATTTAAGGAG+AGG - chr4_1:80162717-80162736 None:intergenic 45.0%
TGGTTTAGGTGACCCAAAAG+GGG - chr4_1:80162735-80162754 None:intergenic 45.0%
GTGGTTTAGGTGACCCAAAA+GGG - chr4_1:80162736-80162755 None:intergenic 45.0%
GTTGAGACGAAAATGGAAGC+AGG - chr4_1:80162779-80162798 None:intergenic 45.0%
AGGGAATTTGAGCTACGACA+GGG - chr4_1:80162818-80162837 None:intergenic 45.0%
TAGGGAATTTGAGCTACGAC+AGG - chr4_1:80162819-80162838 None:intergenic 45.0%
GGTAGTGTGTGATTGTGGAA+GGG + chr4_1:80163182-80163201 Msa0576090:intron 45.0%
GTAGTGTGTGATTGTGGAAG+GGG + chr4_1:80163183-80163202 Msa0576090:intron 45.0%
GGCAGAAAGATAAAGGTGGA+GGG + chr4_1:80163240-80163259 Msa0576090:intron 45.0%
AGAAAGATAAAGGTGGAGGG+AGG + chr4_1:80163243-80163262 Msa0576090:intron 45.0%
GAGGAAGAGAGAGAGAAAGA+GGG + chr4_1:80163262-80163281 Msa0576090:intron 45.0%
AGGAAGAGAGAGAGAAAGAG+GGG + chr4_1:80163263-80163282 Msa0576090:intron 45.0%
TCGTATGACCATTATACCCC+TGG + chr4_1:80163294-80163313 Msa0576090:intron 45.0%
! GGGAGATTTTGTGTGGAGAA+AGG + chr4_1:80163433-80163452 Msa0576090:intron 45.0%
GAGGAAAAAATCTCCTCCGA+GGG - chr4_1:80163523-80163542 None:intergenic 45.0%
! TTGGCATTTGGAACAGGCTT+TGG + chr4_1:80163930-80163949 Msa0576090:intron 45.0%
! TGGCATTTGGAACAGGCTTT+GGG + chr4_1:80163931-80163950 Msa0576090:intron 45.0%
GCTACCATCTGATATTGCTG+AGG + chr4_1:80164452-80164471 Msa0576090:CDS 45.0%
TAAGTGGTTCCTTTCAAGGG+TGG + chr4_1:80164481-80164500 Msa0576090:three_prime_UTR 45.0%
GAGCTCGTTGAAAACTTTGG+AGG + chr4_1:80164528-80164547 Msa0576090:three_prime_UTR 45.0%
GATAGGGACGTGTCAGTAAA+CGG + chr4_1:80164550-80164569 Msa0576090:three_prime_UTR 45.0%
TTCCTTCCATACATCCCCAC+GGG - chr4_1:80159007-80159026 None:intergenic 50.0%
CTTCCTTCCATACATCCCCA+CGG - chr4_1:80159008-80159027 None:intergenic 50.0%
TGTGGGAAAATGAGGTGGTG+TGG + chr4_1:80159029-80159048 Msa0576090:CDS 50.0%
TGAAGGACGAAGACGACAAC+AGG + chr4_1:80159408-80159427 Msa0576090:CDS 50.0%
GAAGGACGAAGACGACAACA+GGG + chr4_1:80159409-80159428 Msa0576090:CDS 50.0%
! AAACTATCCTTTTCGGCCCC+AGG + chr4_1:80159500-80159519 Msa0576090:CDS 50.0%
AGCAGCGAGGAAGAAAAAGC+GGG - chr4_1:80159718-80159737 None:intergenic 50.0%
CAGCAGCGAGGAAGAAAAAG+CGG - chr4_1:80159719-80159738 None:intergenic 50.0%
CCCGTTCAACATTAAGGGGT+TGG + chr4_1:80159742-80159761 Msa0576090:CDS 50.0%
AAGGTGGTGAGTGTGGAGTT+GGG - chr4_1:80159829-80159848 None:intergenic 50.0%
CAAGTTCAAGGTGGTGAGTG+TGG - chr4_1:80159836-80159855 None:intergenic 50.0%
ATGAGAGGAGGCGGATACAT+GGG - chr4_1:80159889-80159908 None:intergenic 50.0%
TATGAGAGGAGGCGGATACA+TGG - chr4_1:80159890-80159909 None:intergenic 50.0%
CCATTGAGTATGAGAGGAGG+CGG - chr4_1:80159898-80159917 None:intergenic 50.0%
! TTTTCTTTCCATCCCCAGGG+AGG + chr4_1:80160009-80160028 Msa0576090:intron 50.0%
TGCTGCCTGTATTGCTAACG+CGG + chr4_1:80160242-80160261 Msa0576090:intron 50.0%
ATTGGCCGCGTTAGCAATAC+AGG - chr4_1:80160250-80160269 None:intergenic 50.0%
ATATGATTTCCAGGGTGGGC+AGG + chr4_1:80160305-80160324 Msa0576090:intron 50.0%
! GGTGCTGCGTCAAGATATCT+TGG + chr4_1:80160973-80160992 Msa0576090:CDS 50.0%
AACAAATGGAGAGGGGGGAT+TGG + chr4_1:80161110-80161129 Msa0576090:intron 50.0%
AGAGAGAGAGAGGGAATGCT+AGG + chr4_1:80161133-80161152 Msa0576090:intron 50.0%
CACTAAGTGGGTAGGCTACA+TGG - chr4_1:80162268-80162287 None:intergenic 50.0%
CATGTAGCCTACCCACTTAG+TGG + chr4_1:80162266-80162285 Msa0576090:intron 50.0%
CAAGCCTCATCCCACTAAGT+GGG - chr4_1:80162280-80162299 None:intergenic 50.0%
AGGATGAGAAAAGGGGTGAG+GGG - chr4_1:80162430-80162449 None:intergenic 50.0%
GAGGATGAGAAAAGGGGTGA+GGG - chr4_1:80162431-80162450 None:intergenic 50.0%
TGAGGATGAGAAAAGGGGTG+AGG - chr4_1:80162432-80162451 None:intergenic 50.0%
TTGCCAACTGTAGACTGGGT+GGG - chr4_1:80162473-80162492 None:intergenic 50.0%
AGGAAGGTGACATTGTGGGA+GGG - chr4_1:80162537-80162556 None:intergenic 50.0%
GAGGAGGAAGGTGACATTGT+GGG - chr4_1:80162541-80162560 None:intergenic 50.0%
AGAGGAGGAAGGTGACATTG+TGG - chr4_1:80162542-80162561 None:intergenic 50.0%
ACAATGTCACCTTCCTCCTC+TGG + chr4_1:80162541-80162560 Msa0576090:intron 50.0%
GGTTTAGGTGACCCAAAAGG+GGG - chr4_1:80162734-80162753 None:intergenic 50.0%
GGTGGTTTAGGTGACCCAAA+AGG - chr4_1:80162737-80162756 None:intergenic 50.0%
!! ATAGCAGGTGTCGGTGGTTT+AGG - chr4_1:80162749-80162768 None:intergenic 50.0%
! AACTGGCGCTGTCATTTGCT+TGG + chr4_1:80162943-80162962 Msa0576090:intron 50.0%
! ACTGGCGCTGTCATTTGCTT+GGG + chr4_1:80162944-80162963 Msa0576090:intron 50.0%
ATAGTCGTCGGAGAGATAGC+AGG - chr4_1:80163107-80163126 None:intergenic 50.0%
TGCTATCTCTCCGACGACTA+TGG + chr4_1:80163106-80163125 Msa0576090:intron 50.0%
AACACTGCTGCCATAGTCGT+CGG - chr4_1:80163119-80163138 None:intergenic 50.0%
ACGACTATGGCAGCAGTGTT+GGG + chr4_1:80163119-80163138 Msa0576090:intron 50.0%
! AGCAGTGTTGGGAAAGAGGA+GGG + chr4_1:80163130-80163149 Msa0576090:intron 50.0%
CGGTAGTGTGTGATTGTGGA+AGG + chr4_1:80163181-80163200 Msa0576090:intron 50.0%
CAACCATTCCATCTTCACGG+CGG - chr4_1:80163209-80163228 None:intergenic 50.0%
GGGCAACCATTCCATCTTCA+CGG - chr4_1:80163212-80163231 None:intergenic 50.0%
GTGAAGATGGAATGGTTGCC+CGG + chr4_1:80163211-80163230 Msa0576090:intron 50.0%
TTATCTTTCTGCCCCTCCTC+CGG - chr4_1:80163233-80163252 None:intergenic 50.0%
GAGGAGGGGCAGAAAGATAA+AGG + chr4_1:80163233-80163252 Msa0576090:intron 50.0%
GAGGGGCAGAAAGATAAAGG+TGG + chr4_1:80163236-80163255 Msa0576090:intron 50.0%
GGGCAGAAAGATAAAGGTGG+AGG + chr4_1:80163239-80163258 Msa0576090:intron 50.0%
GGAGGAAGAGAGAGAGAAAG+AGG + chr4_1:80163261-80163280 Msa0576090:intron 50.0%
GGAAGAGAGAGAGAAAGAGG+GGG + chr4_1:80163264-80163283 Msa0576090:intron 50.0%
GAAGAGAGAGAGAAAGAGGG+GGG + chr4_1:80163265-80163284 Msa0576090:intron 50.0%
! TAGGTGCACCAGGGGTATAA+TGG - chr4_1:80163305-80163324 None:intergenic 50.0%
GGAGGAAAAAATCTCCTCCG+AGG - chr4_1:80163524-80163543 None:intergenic 50.0%
! GGCATTTGGAACAGGCTTTG+GGG + chr4_1:80163932-80163951 Msa0576090:intron 50.0%
AAAGAGATACAGAGGGGGGT+GGG - chr4_1:80164177-80164196 None:intergenic 50.0%
! CAGATGGTAGCTTGTACGTG+CGG - chr4_1:80164443-80164462 None:intergenic 50.0%
CCACAATCACCACCCTTGAA+AGG - chr4_1:80164493-80164512 None:intergenic 50.0%
CCTTTCAAGGGTGGTGATTG+TGG + chr4_1:80164490-80164509 Msa0576090:three_prime_UTR 50.0%
ATTCGATCCTGAGCTGCGGT+CGG + chr4_1:80159438-80159457 Msa0576090:CDS 55.0%
AGAAACACCTGGGGCCGAAA+AGG - chr4_1:80159510-80159529 None:intergenic 55.0%
!! GTGTGGAGTTGGGTTGAGCA+AGG - chr4_1:80159819-80159838 None:intergenic 55.0%
CAAGGTGGTGAGTGTGGAGT+TGG - chr4_1:80159830-80159849 None:intergenic 55.0%
CCGCCTCCTCTCATACTCAA+TGG + chr4_1:80159895-80159914 Msa0576090:CDS 55.0%
ATATACCACCTCCCTGGGGA+TGG - chr4_1:80160020-80160039 None:intergenic 55.0%
TGCTGCAAGCAAAGCAGCTC+TGG - chr4_1:80160352-80160371 None:intergenic 55.0%
GGGGATTGGAGAGAGAGAGA+GGG + chr4_1:80161124-80161143 Msa0576090:intron 55.0%
TGGGGTAGGGTAACCGTAAG+AGG + chr4_1:80161187-80161206 Msa0576090:intron 55.0%
GGGGTAGGGTAACCGTAAGA+GGG + chr4_1:80161188-80161207 Msa0576090:intron 55.0%
TTGGCATCTTAGGTCTCGGG+TGG + chr4_1:80161217-80161236 Msa0576090:intron 55.0%
CCTCATCCCACTAAGTGGGT+AGG - chr4_1:80162276-80162295 None:intergenic 55.0%
CCTACCCACTTAGTGGGATG+AGG + chr4_1:80162273-80162292 Msa0576090:intron 55.0%
CCAAGCCTCATCCCACTAAG+TGG - chr4_1:80162281-80162300 None:intergenic 55.0%
CCACTTAGTGGGATGAGGCT+TGG + chr4_1:80162278-80162297 Msa0576090:intron 55.0%
TGTAGACTGGGTGGGGTTGA+GGG - chr4_1:80162465-80162484 None:intergenic 55.0%
AACCCCACCCAGTCTACAGT+TGG + chr4_1:80162467-80162486 Msa0576090:intron 55.0%
TGCCAACTGTAGACTGGGTG+GGG - chr4_1:80162472-80162491 None:intergenic 55.0%
GTTGCCAACTGTAGACTGGG+TGG - chr4_1:80162474-80162493 None:intergenic 55.0%
AAGGTGACATTGTGGGAGGG+TGG - chr4_1:80162534-80162553 None:intergenic 55.0%
GAGGAAGGTGACATTGTGGG+AGG - chr4_1:80162538-80162557 None:intergenic 55.0%
CGCATGCAACGACAGGATGA+TGG - chr4_1:80162677-80162696 None:intergenic 55.0%
TGCCACTAAAACCCTCGTCC+AGG + chr4_1:80162988-80163007 Msa0576090:intron 55.0%
!! TGCCTGGACGAGGGTTTTAG+TGG - chr4_1:80162993-80163012 None:intergenic 55.0%
GACTTTCGTTGCCTGGACGA+GGG - chr4_1:80163002-80163021 None:intergenic 55.0%
TGACTTTCGTTGCCTGGACG+AGG - chr4_1:80163003-80163022 None:intergenic 55.0%
! CACGGTTGACTTTCGTTGCC+TGG - chr4_1:80163009-80163028 None:intergenic 55.0%
GACGACTATGGCAGCAGTGT+TGG + chr4_1:80163118-80163137 Msa0576090:intron 55.0%
! TGGCAGCAGTGTTGGGAAAG+AGG + chr4_1:80163126-80163145 Msa0576090:intron 55.0%
! CAGCAGTGTTGGGAAAGAGG+AGG + chr4_1:80163129-80163148 Msa0576090:intron 55.0%
! GCAGTGTTGGGAAAGAGGAG+GGG + chr4_1:80163131-80163150 Msa0576090:intron 55.0%
TCCATCCCGCACATGACTCT+TGG - chr4_1:80163160-80163179 None:intergenic 55.0%
GGAGCGGTAGTGTGTGATTG+TGG + chr4_1:80163177-80163196 Msa0576090:intron 55.0%
AAGATGGAATGGTTGCCCGG+AGG + chr4_1:80163214-80163233 Msa0576090:intron 55.0%
TATCTTTCTGCCCCTCCTCC+GGG - chr4_1:80163232-80163251 None:intergenic 55.0%
!! CAGGCTTTGGGGAACACTTC+TGG + chr4_1:80163943-80163962 Msa0576090:intron 55.0%
GAAAGAGATACAGAGGGGGG+TGG - chr4_1:80164178-80164197 None:intergenic 55.0%
GTCGACGACGACGAAGACGT+AGG - chr4_1:80159113-80159132 None:intergenic 60.0%
CGTCGACGTCGTCATCGTCA+TGG + chr4_1:80159126-80159145 Msa0576090:CDS 60.0%
TTGAACGGGCATCAGCAGCG+AGG - chr4_1:80159731-80159750 None:intergenic 60.0%
TCTTTCCATCCCCAGGGAGG+TGG + chr4_1:80160012-80160031 Msa0576090:intron 60.0%
TCAAAGCTACCTGCCCACCC+TGG - chr4_1:80160317-80160336 None:intergenic 60.0%
GGGGGATTGGAGAGAGAGAG+AGG + chr4_1:80161123-80161142 Msa0576090:intron 60.0%
CTCGGGTGGTGTAGAGAGTG+TGG + chr4_1:80161231-80161250 Msa0576090:intron 60.0%
GTTGAGGGAGGTGGAGGATG+AGG - chr4_1:80162450-80162469 None:intergenic 60.0%
CTGTAGACTGGGTGGGGTTG+AGG - chr4_1:80162466-80162485 None:intergenic 60.0%
! TGTCAGAGTTGGGGTGCCAG+AGG - chr4_1:80162560-80162579 None:intergenic 60.0%
GCTACGACAGGGTGATCACG+AGG - chr4_1:80162807-80162826 None:intergenic 60.0%
GTGTTGGGAAAGAGGAGGGG+TGG + chr4_1:80163134-80163153 Msa0576090:intron 60.0%
GGGTGGCCAAGAGTCATGTG+CGG + chr4_1:80163151-80163170 Msa0576090:intron 60.0%
GGTGGCCAAGAGTCATGTGC+GGG + chr4_1:80163152-80163171 Msa0576090:intron 60.0%
GCCAAGAGTCATGTGCGGGA+TGG + chr4_1:80163156-80163175 Msa0576090:intron 60.0%
GAGTCATGTGCGGGATGGAG+CGG + chr4_1:80163161-80163180 Msa0576090:intron 60.0%
ATGGAATGGTTGCCCGGAGG+AGG + chr4_1:80163217-80163236 Msa0576090:intron 60.0%
TGGAATGGTTGCCCGGAGGA+GGG + chr4_1:80163218-80163237 Msa0576090:intron 60.0%
TGTAGAGAGGGGGAAGCCCT+CGG + chr4_1:80163504-80163523 Msa0576090:intron 60.0%
AGATACAGAGGGGGGTGGGT+GGG - chr4_1:80164173-80164192 None:intergenic 60.0%
!! TCAAGCACCGACCGCAGCTC+AGG - chr4_1:80159448-80159467 None:intergenic 65.0%
AGACTGGGTGGGGTTGAGGG+AGG - chr4_1:80162462-80162481 None:intergenic 65.0%
GTGGGAGGGTGGACGCCAAT+GGG - chr4_1:80162523-80162542 None:intergenic 65.0%
TGTGGGAGGGTGGACGCCAA+TGG - chr4_1:80162524-80162543 None:intergenic 65.0%
! GTTGGGGTGCCAGAGGAGGA+AGG - chr4_1:80162553-80162572 None:intergenic 65.0%
! CAGAGTTGGGGTGCCAGAGG+AGG - chr4_1:80162557-80162576 None:intergenic 65.0%
GGGCCGCCGTGAAGATGGAA+TGG + chr4_1:80163203-80163222 Msa0576090:intron 65.0%
GGAATGGTTGCCCGGAGGAG+GGG + chr4_1:80163219-80163238 Msa0576090:intron 65.0%
ATACAGAGGGGGGTGGGTGG+GGG - chr4_1:80164171-80164190 None:intergenic 65.0%
GATACAGAGGGGGGTGGGTG+GGG - chr4_1:80164172-80164191 None:intergenic 65.0%
GAGATACAGAGGGGGGTGGG+TGG - chr4_1:80164174-80164193 None:intergenic 65.0%
GGTGGGGTTGAGGGAGGTGG+AGG - chr4_1:80162456-80162475 None:intergenic 70.0%
CTGGGTGGGGTTGAGGGAGG+TGG - chr4_1:80162459-80162478 None:intergenic 70.0%
GGAAGGGGCCGCCGTGAAGA+TGG + chr4_1:80163198-80163217 Msa0576090:intron 70.0%
AGAGAGGGGGAAGCCCTCGG+AGG + chr4_1:80163507-80163526 Msa0576090:intron 70.0%
TACAGAGGGGGGTGGGTGGG+GGG - chr4_1:80164170-80164189 None:intergenic 70.0%
ACAGAGGGGGGTGGGTGGGG+GGG - chr4_1:80164169-80164188 None:intergenic 75.0%
! AGAGGGGGGTGGGTGGGGGG+GGG - chr4_1:80164167-80164186 None:intergenic 80.0%
! CAGAGGGGGGTGGGTGGGGG+GGG - chr4_1:80164168-80164187 None:intergenic 80.0%
! AGGGGGGTGGGTGGGGGGGG+GGG - chr4_1:80164165-80164184 None:intergenic 85.0%
! GAGGGGGGTGGGTGGGGGGG+GGG - chr4_1:80164166-80164185 None:intergenic 85.0%
! TGGGTGGGGGGGGGGGGGGG+GGG - chr4_1:80164158-80164177 None:intergenic 90.0%
! GTGGGTGGGGGGGGGGGGGG+GGG - chr4_1:80164159-80164178 None:intergenic 90.0%
! GGTGGGTGGGGGGGGGGGGG+GGG - chr4_1:80164160-80164179 None:intergenic 90.0%
! GGGTGGGTGGGGGGGGGGGG+GGG - chr4_1:80164161-80164180 None:intergenic 90.0%
! GGGGTGGGTGGGGGGGGGGG+GGG - chr4_1:80164162-80164181 None:intergenic 90.0%
! GGGGGTGGGTGGGGGGGGGG+GGG - chr4_1:80164163-80164182 None:intergenic 90.0%
! GGGGGGTGGGTGGGGGGGGG+GGG - chr4_1:80164164-80164183 None:intergenic 90.0%
! GTGGGGGGGGGGGGGGGGGG+GGG - chr4_1:80164155-80164174 None:intergenic 95.0%
! GGTGGGGGGGGGGGGGGGGG+GGG - chr4_1:80164156-80164175 None:intergenic 95.0%
! GGGTGGGGGGGGGGGGGGGG+GGG - chr4_1:80164157-80164176 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 80159003 80164733 80159003 ID=Msa0576090;Name=Msa0576090
chr4_1 mRNA 80159003 80164733 80159003 ID=Msa0576090-mRNA-1;Parent=Msa0576090;Name=Msa0576090-mRNA-1;_AED=0.05;_eAED=0.05;_QI=14|0.87|0.88|1|1|1|9|254|407
chr4_1 exon 80159003 80159223 80159003 ID=Msa0576090-mRNA-1:exon:28603;Parent=Msa0576090-mRNA-1
chr4_1 exon 80159328 80159521 80159328 ID=Msa0576090-mRNA-1:exon:28604;Parent=Msa0576090-mRNA-1
chr4_1 exon 80159605 80159944 80159605 ID=Msa0576090-mRNA-1:exon:28605;Parent=Msa0576090-mRNA-1
chr4_1 exon 80160027 80160065 80160027 ID=Msa0576090-mRNA-1:exon:28606;Parent=Msa0576090-mRNA-1
chr4_1 exon 80160153 80160227 80160153 ID=Msa0576090-mRNA-1:exon:28607;Parent=Msa0576090-mRNA-1
chr4_1 exon 80160318 80160377 80160318 ID=Msa0576090-mRNA-1:exon:28608;Parent=Msa0576090-mRNA-1
chr4_1 exon 80160964 80161028 80160964 ID=Msa0576090-mRNA-1:exon:28609;Parent=Msa0576090-mRNA-1
chr4_1 exon 80163946 80164138 80163946 ID=Msa0576090-mRNA-1:exon:28610;Parent=Msa0576090-mRNA-1
chr4_1 exon 80164429 80164733 80164429 ID=Msa0576090-mRNA-1:exon:28611;Parent=Msa0576090-mRNA-1
chr4_1 five_prime_UTR 80159003 80159016 80159003 ID=Msa0576090-mRNA-1:five_prime_utr;Parent=Msa0576090-mRNA-1
chr4_1 CDS 80159017 80159223 80159017 ID=Msa0576090-mRNA-1:cds;Parent=Msa0576090-mRNA-1
chr4_1 CDS 80159328 80159521 80159328 ID=Msa0576090-mRNA-1:cds;Parent=Msa0576090-mRNA-1
chr4_1 CDS 80159605 80159944 80159605 ID=Msa0576090-mRNA-1:cds;Parent=Msa0576090-mRNA-1
chr4_1 CDS 80160027 80160065 80160027 ID=Msa0576090-mRNA-1:cds;Parent=Msa0576090-mRNA-1
chr4_1 CDS 80160153 80160227 80160153 ID=Msa0576090-mRNA-1:cds;Parent=Msa0576090-mRNA-1
chr4_1 CDS 80160318 80160377 80160318 ID=Msa0576090-mRNA-1:cds;Parent=Msa0576090-mRNA-1
chr4_1 CDS 80160964 80161028 80160964 ID=Msa0576090-mRNA-1:cds;Parent=Msa0576090-mRNA-1
chr4_1 CDS 80163946 80164138 80163946 ID=Msa0576090-mRNA-1:cds;Parent=Msa0576090-mRNA-1
chr4_1 CDS 80164429 80164479 80164429 ID=Msa0576090-mRNA-1:cds;Parent=Msa0576090-mRNA-1
chr4_1 three_prime_UTR 80164480 80164733 80164480 ID=Msa0576090-mRNA-1:three_prime_utr;Parent=Msa0576090-mRNA-1
Gene Sequence

>Msa0576090

ATGGAAGGAAGTTGTGGGAAAATGAGGTGGTGTGGAAATGCAACAAGTTCAATTGCAATGGCAATTACAATATCAACAAGTGGAGTGGGCGTGCCTACGTCTTCGTCGTCGTCGACGTCGTCATCGTCATGGTTTTGCTGTTGTTGGAAATGGAAACTGTGCCACAACAACACTACTTACCCAGTAACAACAACAACAACAACAACGGAACTAGTTTGGCCATATCGCAATAATCGGAATGTGATGAAGAAGAAGAAGGTGCGTTGTCTGAAAAAGGCAGATGTAAGTGAAGGACGAAGACGACAACAGGGCTTTGAATTCGATCCTGAGCTGCGGTCGGTGCTTGAACTTGCAACCGACTCCGAGTTGTCTGAAATTCAAACTATCCTTTTCGGCCCCAGCTACTTGAGTCCTTTGCTTAAATCAATCACAAGTGCATCAAGTAACATGGATCCATCCATGATTGAACATGACATTCAACTACGCCATCACTTTATTGAGACTCTCGAGTCCCGCTTTTTCTTCCTCGCTGCTGATGCCCGTTCAACATTAAGGGGTTGGAGGCCTTCTTACAGAAATGTCTTGCTTCACCTAACCTCTAAATTGAATATTCCTTGCTCAACCCAACTCCACACTCACCACCTTGAACTTGAAATATTCCTCCACCTTTTACACTTCAACTCCCATGTATCCGCCTCCTCTCATACTCAATGGAAACACTTTCAATCTATTCTTTTCAAGGGAGGTGGTATATTTACGTTGGCGAAGATATATCAATTGTTGGCGACCAAATTATCTGGGAAAATGCTTGTAGAAGCTGCTAACTACCAGGTTAAGAAAGAGTTATTGAAGAAGGGTGGGCAGGTAGCTTTGATCAATCTAGAATCCAGAGCTGCTTTGCTTGCAGCAAAACAGGGTTTTCTTGGTGCTGCGTCAAGATATCTTGGTTTTAGAAGCATGCTCACATTACTTGGACCTGTGCTTTGGGGAACACTTCTGGCTGATCTTGTCATTCAAATGCTGGGAACAGATTATGCTAGAATCTTGCGAACAATTTATGCTTTAGCTCAGGCAATATTTTTGTGCTCTGTTCTAAAGTCTAATTTGCCTGCCGGACTTGATATGATTTTCTTTGTGTTGTGCTTCTTTGGTGATTTATTTAGGGCACTTGTGATTCGAGTCATCCGCACGTACAAGCTACCATCTGATATTGCTGAGGAATAG

Protein sequence

>Msa0576090

MEGSCGKMRWCGNATSSIAMAITISTSGVGVPTSSSSSTSSSSWFCCCWKWKLCHNNTTYPVTTTTTTTELVWPYRNNRNVMKKKKVRCLKKADVSEGRRRQQGFEFDPELRSVLELATDSELSEIQTILFGPSYLSPLLKSITSASSNMDPSMIEHDIQLRHHFIETLESRFFFLAADARSTLRGWRPSYRNVLLHLTSKLNIPCSTQLHTHHLELEIFLHLLHFNSHVSASSHTQWKHFQSILFKGGGIFTLAKIYQLLATKLSGKMLVEAANYQVKKELLKKGGQVALINLESRAALLAAKQGFLGAASRYLGFRSMLTLLGPVLWGTLLADLVIQMLGTDYARILRTIYALAQAIFLCSVLKSNLPAGLDMIFFVLCFFGDLFRALVIRVIRTYKLPSDIAEE*