AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1293040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1293040 MtrunA17_Chr8g0368501 90.435 575 19 3 1 540 1 574 0.0 1043
Msa1293040 MtrunA17_Chr8g0390131 44.402 527 217 12 27 493 13 523 5.68e-130 393
Msa1293040 MtrunA17_Chr7g0246441 37.673 361 157 6 44 367 40 369 5.27e-66 219
Msa1293040 MtrunA17_Chr0c01g0489491 39.203 301 113 7 102 363 54 323 2.01e-62 207
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1293040 AT1G23400.1 57.093 578 170 10 16 539 11 564 0.0 606
Msa1293040 AT2G20020.1 53.117 369 124 4 65 388 102 466 2.21e-126 386
Msa1293040 AT4G31010.1 38.339 313 135 6 93 367 75 367 4.64e-64 214
Msa1293040 AT4G31010.2 37.500 320 135 7 93 367 75 374 4.39e-61 207
Msa1293040 AT5G54890.1 36.275 306 127 6 97 364 73 348 8.36e-60 202

Find 183 sgRNAs with CRISPR-Local

Find 527 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATGGGTTTGTAATATT+TGG 0.201196 8_3:+49902239 None:intergenic
TGAAATGCCGGGGCCGTTTC+CGG 0.203657 8_3:-49901932 Msa1293040:CDS
TTTGGGTTTGGTGGTGGTGG+GGG 0.227054 8_3:+49902288 None:intergenic
GGGTTTGGGTTTGGTGGTGG+TGG 0.231278 8_3:+49902285 None:intergenic
ATAGCAATTGGTTTCACTTT+TGG 0.233655 8_3:+49902102 None:intergenic
ATTAAATTCTTCTAGCAATA+AGG 0.245101 8_3:+49896465 None:intergenic
TCAGCTTTCGTTAATCCTTC+TGG 0.253371 8_3:+49899058 None:intergenic
GGAGCATCTTGTATAAGTTT+TGG 0.254544 8_3:+49899079 None:intergenic
GTTAGTTGTATATAATTAAT+TGG 0.291855 8_3:-49896012 Msa1293040:three_prime_UTR
TGGTGTTTGAGGGCGGGGTT+TGG 0.293090 8_3:+49902270 None:intergenic
TTGTTGCCAATATGTAAATT+AGG 0.293580 8_3:-49899004 Msa1293040:intron
TTGGGTTTGGTGGTGGTGGG+GGG 0.293803 8_3:+49902289 None:intergenic
GTTTGGGTTTGGTGGTGGTG+GGG 0.296186 8_3:+49902287 None:intergenic
GAGATTAACTTGGCGATTAT+CGG 0.301688 8_3:+49901813 None:intergenic
AGGGCGGGGTTTGGGTTTGG+TGG 0.307637 8_3:+49902279 None:intergenic
GCGGGGTTTGGGTTTGGTGG+TGG 0.309665 8_3:+49902282 None:intergenic
TTGAGGGCGGGGTTTGGGTT+TGG 0.324821 8_3:+49902276 None:intergenic
ACCAATTTCAAACCTCAATA+TGG 0.325004 8_3:+49901026 None:intergenic
GGTGTTTGAGGGCGGGGTTT+GGG 0.325373 8_3:+49902271 None:intergenic
ACAAGGGATTTAGAAAATAA+AGG 0.326497 8_3:-49897363 Msa1293040:intron
GGTTTGGGTTTGGTGGTGGT+GGG 0.326513 8_3:+49902286 None:intergenic
GGGTGTGATTTGCGAGGTGG+GGG 0.330023 8_3:+49902309 None:intergenic
TCGGAGGAAGGGATGGTAAT+GGG 0.330920 8_3:+49902213 None:intergenic
ATGATGAACAAGTACTGATT+TGG 0.334584 8_3:-49897452 Msa1293040:CDS
AAGCTGAAGCAGATGAATTA+AGG 0.343513 8_3:-49899042 Msa1293040:CDS
GGGGTGTGATTTGCGAGGTG+GGG 0.350623 8_3:+49902308 None:intergenic
TGGTTACCTAATTTACATAT+TGG 0.355567 8_3:+49898998 None:intergenic
TTGCTAGAAGAATTTAATAT+TGG 0.361124 8_3:-49896460 Msa1293040:CDS
GGGGATAGGCGGACGTGGGG+TGG 0.362867 8_3:+49902344 None:intergenic
GTCCACGGCCTCGGCATTGT+GGG 0.376828 8_3:+49902048 None:intergenic
AGGTGTTCCTACCGTTGATA+TGG 0.377777 8_3:-49901062 Msa1293040:CDS
TGGCGATTATCGGCCATCAT+AGG 0.381412 8_3:+49901823 None:intergenic
ATGGTAATGGGGTGGGTGAT+GGG 0.383790 8_3:+49902225 None:intergenic
TATTGGTCCTGATGCTCTCT+TGG 0.385503 8_3:-49896443 Msa1293040:CDS
TTGCGGTGGTGTTTGAGGGC+GGG 0.388136 8_3:+49902264 None:intergenic
GATGGTAATGGGGTGGGTGA+TGG 0.391258 8_3:+49902224 None:intergenic
TGCCGGGGCCGTTTCCGGTT+GGG 0.392027 8_3:-49901927 Msa1293040:CDS
TGAGGAAGATGAGGGGTTGT+TGG 0.394566 8_3:+49902371 None:intergenic
CTCTCCCCTCCCAGCTGGTA+GGG 0.395636 8_3:-49902418 Msa1293040:CDS
TTACCAGTTGATTTGCTTGT+TGG 0.396093 8_3:-49896163 Msa1293040:CDS
TCCGTCATCATCGGCGAATC+CGG 0.401075 8_3:-49902183 Msa1293040:CDS
GGAATGGGGATAGGCGGACG+TGG 0.401246 8_3:+49902339 None:intergenic
GATAGGCGGACGTGGGGTGG+CGG 0.403490 8_3:+49902347 None:intergenic
TGCGGTGGTGTTTGAGGGCG+GGG 0.403982 8_3:+49902265 None:intergenic
TGATTTGGAGGGGCAAAGAT+TGG 0.403995 8_3:-49897437 Msa1293040:CDS
TGAAACTCGAAGGGAGCTCC+AGG 0.410584 8_3:+49902144 None:intergenic
GCCGGTTCACGGATAGCAAT+TGG 0.410726 8_3:+49902090 None:intergenic
CGGACGTGGGGTGGCGGATG+AGG 0.411998 8_3:+49902353 None:intergenic
TGAGGGGTTGTTGGGTGGTA+AGG 0.412526 8_3:+49902380 None:intergenic
CGGAGGAAGGGATGGTAATG+GGG 0.414270 8_3:+49902214 None:intergenic
TCTCTACTTATCCCTTCTTC+CGG 0.417355 8_3:+49901898 None:intergenic
GGAGTTGCGGTGGTGTTTGA+GGG 0.421599 8_3:+49902260 None:intergenic
TGTCCACGGCCTCGGCATTG+TGG 0.423682 8_3:+49902047 None:intergenic
GTTTCCGGTTGGGAAGTTTC+CGG 0.429382 8_3:-49901917 Msa1293040:CDS
GCTTTCCCTGTCCACGGCCT+CGG 0.430447 8_3:+49902039 None:intergenic
TGTCTTGTGTACCATCTTGA+AGG 0.430898 8_3:+49896320 None:intergenic
GAGGAAGATGAGGGGTTGTT+GGG 0.434206 8_3:+49902372 None:intergenic
ACCTTCTCCAAGAGAGCATC+AGG 0.436156 8_3:+49896436 None:intergenic
CACAGTATCCAGTGATGCTC+TGG 0.436749 8_3:-49899123 Msa1293040:CDS
CAAATCAACTGGTAACAATC+CGG 0.437535 8_3:+49896171 None:intergenic
CCTCTCCCCTCCCAGCTGGT+AGG 0.437628 8_3:-49902419 Msa1293040:CDS
TCTCCCCTCCCAGCTGGTAG+GGG 0.439404 8_3:-49902417 Msa1293040:CDS
GTTGGGAAGTTTCCGGAAGA+AGG 0.443079 8_3:-49901910 Msa1293040:CDS
CTCCCACAATGCCGAGGCCG+TGG 0.446187 8_3:-49902050 Msa1293040:CDS
GGAGAAGGTAGAAGAATTTG+AGG 0.446433 8_3:-49896422 Msa1293040:CDS
GGAAACTTCCCAACCGGAAA+CGG 0.446912 8_3:+49901919 None:intergenic
ACCAATTGCTATCCGTGAAC+CGG 0.450005 8_3:-49902091 Msa1293040:CDS
AGGAAGGGATGGTAATGGGG+TGG 0.452996 8_3:+49902217 None:intergenic
GCTGGCTTCCAGAGCATCAC+TGG 0.454686 8_3:+49899115 None:intergenic
CATAATCATCAGCATCATCT+AGG 0.454816 8_3:+49896281 None:intergenic
CCAACTCACCGAGATTAACT+TGG 0.455660 8_3:+49901803 None:intergenic
GGTGGCGGATGAGGAAGATG+AGG 0.456861 8_3:+49902362 None:intergenic
ACAATGCCGAGGCCGTGGAC+AGG 0.457243 8_3:-49902045 Msa1293040:CDS
ATCTAAGCACATCAGCGAAA+TGG 0.458108 8_3:-49896545 Msa1293040:CDS
GCAGATGAATTAAGGATGAA+AGG 0.461938 8_3:-49899034 Msa1293040:CDS
ATAAGTAGAGAGGAGATACT+TGG 0.462835 8_3:-49901886 Msa1293040:CDS
CAGATGAATTAAGGATGAAA+GGG 0.463524 8_3:-49899033 Msa1293040:CDS
TGGAGTTGCGGTGGTGTTTG+AGG 0.464560 8_3:+49902259 None:intergenic
GGTGTGATTTGCGAGGTGGG+GGG 0.465880 8_3:+49902310 None:intergenic
GATGATGACGGAGCGGTTGT+CGG 0.474703 8_3:+49902194 None:intergenic
TTAACACCTTTCATCCCATC+CGG 0.474800 8_3:+49901961 None:intergenic
CACCATGGATAGGTGTTTCA+AGG 0.476210 8_3:+49902455 None:intergenic
TTTGATGGTGTAGGAAGGGA+TGG 0.476690 8_3:-49901157 Msa1293040:intron
TCTTCCGGAAACTTCCCAAC+CGG 0.477742 8_3:+49901913 None:intergenic
GTGGCGGATGAGGAAGATGA+GGG 0.479280 8_3:+49902363 None:intergenic
CTGCTGAAGCTACCATTACA+AGG 0.479834 8_3:-49897380 Msa1293040:CDS
TTCCCAACCGGAAACGGCCC+CGG 0.479889 8_3:+49901925 None:intergenic
TTTGGATAAACAGGAGCAGC+TGG 0.481573 8_3:+49899097 None:intergenic
CGATGAGTTTAATGATATAG+TGG 0.484106 8_3:-49896209 Msa1293040:CDS
GTCGGAGGAAGGGATGGTAA+TGG 0.485263 8_3:+49902212 None:intergenic
GGCGTCTCCTACCTTCTCCC+TGG 0.492972 8_3:-49902162 Msa1293040:CDS
ATGCCGGGGCCGTTTCCGGT+TGG 0.495232 8_3:-49901928 Msa1293040:CDS
AATGGGGATAGGCGGACGTG+GGG 0.497008 8_3:+49902341 None:intergenic
TTACCAACAAGCAAATCAAC+TGG 0.497773 8_3:+49896160 None:intergenic
TTATCCTCTCCCCTCCCAGC+TGG 0.498105 8_3:-49902423 Msa1293040:CDS
GTCTGCAAAATTCGTTGTAA+AGG 0.499846 8_3:-49901082 Msa1293040:CDS
GGCATTGTGGGAGGTTCAAA+CGG 0.500096 8_3:+49902060 None:intergenic
GTTGCGGTGGTGTTTGAGGG+CGG 0.500745 8_3:+49902263 None:intergenic
CGAAGGGAGCTCCAGGGAGA+AGG 0.502185 8_3:+49902151 None:intergenic
TAATGTTTGCCGCCATATTG+AGG 0.502809 8_3:-49901038 Msa1293040:intron
CAATGCCGAGGCCGTGGACA+GGG 0.503686 8_3:-49902044 Msa1293040:CDS
CTCCCCTCCCAGCTGGTAGG+GGG 0.503818 8_3:-49902416 Msa1293040:CDS
TGTGTAAATTAGCAAATAGC+TGG 0.506946 8_3:-49896071 Msa1293040:three_prime_UTR
TGAAGAAGTAAATGCTGGAT+AGG 0.509878 8_3:+49896375 None:intergenic
TAAGCTCAAACTAAGACAAA+AGG 0.509879 8_3:-49896140 Msa1293040:CDS
TCGTTTAATCCTCCACCGGA+TGG 0.512441 8_3:-49901976 Msa1293040:CDS
TGCACCTCCCACTTCTTAAG+CGG 0.514241 8_3:+49901859 None:intergenic
GAGAAGGTAGAAGAATTTGA+GGG 0.515767 8_3:-49896421 Msa1293040:CDS
AACGGTGCTTTCCCTGTCCA+CGG 0.517992 8_3:+49902033 None:intergenic
GGGGTTGTTGGGTGGTAAGG+AGG 0.521292 8_3:+49902383 None:intergenic
ACGGAGCGGTTGTCGGAGGA+AGG 0.523999 8_3:+49902201 None:intergenic
TCAAATTTATACCTTCAAGA+TGG 0.526114 8_3:-49896331 Msa1293040:CDS
TGACTTGAAGAAGTAAATGC+TGG 0.526846 8_3:+49896370 None:intergenic
CTGTCATGACAGGAGAAAGC+AGG 0.528302 8_3:-49899220 Msa1293040:intron
CCTTTCATCCCATCCGGTGG+AGG 0.528835 8_3:+49901967 None:intergenic
CTTGTAATGGTAGCTTCAGC+AGG 0.533302 8_3:+49897381 None:intergenic
TGGCGGATGAGGAAGATGAG+GGG 0.534617 8_3:+49902364 None:intergenic
CGTTTAATCCTCCACCGGAT+GGG 0.535148 8_3:-49901975 Msa1293040:CDS
CCTCCACCGGATGGGATGAA+AGG 0.535702 8_3:-49901967 Msa1293040:CDS
TTCTTCTTCGACTTCTTCAA+CGG 0.536586 8_3:+49902015 None:intergenic
TGTTAAGAAAGTTGAAATGC+CGG 0.538229 8_3:-49901944 Msa1293040:CDS
CTGGATACTGTGGACGAGTA+CGG 0.540010 8_3:+49899134 None:intergenic
ATGAACAAGTACTGATTTGG+AGG 0.541398 8_3:-49897449 Msa1293040:CDS
GGAAGGGATGGTAATGGGGT+GGG 0.543172 8_3:+49902218 None:intergenic
TCCTGATGCTCTCTTGGAGA+AGG 0.544608 8_3:-49896437 Msa1293040:CDS
GAATGGGGATAGGCGGACGT+GGG 0.544610 8_3:+49902340 None:intergenic
CACGGCCTCGGCATTGTGGG+AGG 0.545118 8_3:+49902051 None:intergenic
TTGGGAAGTTTCCGGAAGAA+GGG 0.549948 8_3:-49901909 Msa1293040:CDS
GACAACCGCTCCGTCATCAT+CGG 0.550089 8_3:-49902192 Msa1293040:CDS
TGATTCGTTTAATCCTCCAC+CGG 0.550915 8_3:-49901980 Msa1293040:CDS
GTTAAGAAAGTTGAAATGCC+GGG 0.557025 8_3:-49901943 Msa1293040:CDS
TGGGTGGTAAGGAGGAGAAG+AGG 0.564932 8_3:+49902391 None:intergenic
GCGGTTGTCGGAGGAAGGGA+TGG 0.567153 8_3:+49902206 None:intergenic
AAATCAACTGGTAACAATCC+GGG 0.568167 8_3:+49896172 None:intergenic
GGGAGCTCCAGGGAGAAGGT+AGG 0.573674 8_3:+49902155 None:intergenic
GTTTGTAATATTTGGAGTTG+CGG 0.574939 8_3:+49902247 None:intergenic
CCTACCAGCTGGGAGGGGAG+AGG 0.577642 8_3:+49902419 None:intergenic
GCCGGATTCGCCGATGATGA+CGG 0.582513 8_3:+49902182 None:intergenic
TGGATTAACGCATAACATGT+TGG 0.584391 8_3:-49901137 Msa1293040:CDS
TTGGTGAGCCGCTTAAGAAG+TGG 0.586181 8_3:-49901867 Msa1293040:CDS
CAAGACAACTATTCAAGTGA+TGG 0.590922 8_3:-49896304 Msa1293040:CDS
TGGTGAGCCGCTTAAGAAGT+GGG 0.592158 8_3:-49901866 Msa1293040:CDS
GAAGATGAGGGGTTGTTGGG+TGG 0.592492 8_3:+49902375 None:intergenic
GGGAAAATAATTCATCGAGC+TGG 0.592781 8_3:-49899196 Msa1293040:CDS
GGTAGTTGTAATTTCTGCCA+CGG 0.594943 8_3:+49899155 None:intergenic
CGGAGCGGTTGTCGGAGGAA+GGG 0.596973 8_3:+49902202 None:intergenic
CACCTTGAAACACCTATCCA+TGG 0.597038 8_3:-49902457 Msa1293040:exon
AAAATAATTCATCGAGCTGG+CGG 0.598507 8_3:-49899193 Msa1293040:CDS
TGGAGTTGATACATTCACAT+TGG 0.599029 8_3:-49901117 Msa1293040:CDS
AGGGAGAAGGTAGGAGACGC+CGG 0.602148 8_3:+49902164 None:intergenic
ATGCAACTAGCACCATGGAT+AGG 0.602321 8_3:+49902445 None:intergenic
ACATTGTTAATCAGGTGAGG+TGG 0.605237 8_3:-49896578 Msa1293040:intron
TGTCATGACAGGAGAAAGCA+GGG 0.606267 8_3:-49899219 Msa1293040:intron
CTTATACAAGATGCTCCAGA+AGG 0.609269 8_3:-49899073 Msa1293040:CDS
ACACCTTTCATCCCATCCGG+TGG 0.611646 8_3:+49901964 None:intergenic
GTAACTGAACTGAAACTCGA+AGG 0.612467 8_3:+49902134 None:intergenic
AATGCTTGTTAAGCCTATGA+TGG 0.616220 8_3:-49901836 Msa1293040:CDS
ACATTATCCATATCAACGGT+AGG 0.616575 8_3:+49901055 None:intergenic
TGTAATATTTGGAGTTGCGG+TGG 0.617968 8_3:+49902250 None:intergenic
GGAAGAAGGGATAAGTAGAG+AGG 0.618216 8_3:-49901896 Msa1293040:CDS
GTGGATACATCAGCTGAACC+CGG 0.620589 8_3:-49896190 Msa1293040:CDS
GATAATCGCCAAGTTAATCT+CGG 0.621259 8_3:-49901811 Msa1293040:intron
GATGACGGAGCGGTTGTCGG+AGG 0.622037 8_3:+49902197 None:intergenic
TAACTGAACTGAAACTCGAA+GGG 0.632131 8_3:+49902135 None:intergenic
GCAAACATTATCCATATCAA+CGG 0.633398 8_3:+49901051 None:intergenic
TCATGACAGGAGAAAGCAGG+GGG 0.635654 8_3:-49899217 Msa1293040:intron
TTGAACCTCCCACAATGCCG+AGG 0.638283 8_3:-49902056 Msa1293040:CDS
TCGAAAGACAATAGCACACA+AGG 0.641203 8_3:+49897474 None:intergenic
TGAACAAGTACTGATTTGGA+GGG 0.645497 8_3:-49897448 Msa1293040:CDS
GTAATGGTAGCTTCAGCAGG+AGG 0.648130 8_3:+49897384 None:intergenic
CAGAGCATCACTGGATACTG+TGG 0.656560 8_3:+49899124 None:intergenic
TGCTGAAGCTACCATTACAA+GGG 0.658377 8_3:-49897379 Msa1293040:CDS
GAACAAGTACTGATTTGGAG+GGG 0.660461 8_3:-49897447 Msa1293040:CDS
TTAAGAAAGTTGAAATGCCG+GGG 0.666363 8_3:-49901942 Msa1293040:CDS
GAAACTCGAAGGGAGCTCCA+GGG 0.672773 8_3:+49902145 None:intergenic
GGATAATGCAACTAGCACCA+TGG 0.688445 8_3:+49902440 None:intergenic
AATTTCAAACCTCAATATGG+CGG 0.689711 8_3:+49901029 None:intergenic
GTCATGACAGGAGAAAGCAG+GGG 0.723892 8_3:-49899218 Msa1293040:intron
GGATTAAACGAATCAAACAG+CGG 0.734775 8_3:+49901988 None:intergenic
ATTCGCCGATGATGACGGAG+CGG 0.738752 8_3:+49902187 None:intergenic
TGAGCCGCTTAAGAAGTGGG+AGG 0.754394 8_3:-49901863 Msa1293040:CDS
TGCTGGATAGGAGTGCTCTG+TGG 0.761532 8_3:+49896387 None:intergenic
CATGACAGGAGAAAGCAGGG+GGG 0.794713 8_3:-49899216 Msa1293040:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATGACTAAAATTAT+TGG + chr8_3:49897569-49897588 None:intergenic 10.0%
!! ACATTAAATTTATTACATAA+AGG - chr8_3:49900042-49900061 Msa1293040:intron 10.0%
!! CATTAAATTTATTACATAAA+GGG - chr8_3:49900043-49900062 Msa1293040:intron 10.0%
!! ATTAAATTTATTACATAAAG+GGG - chr8_3:49900044-49900063 Msa1293040:intron 10.0%
!!! TTTTTATATATTTCTTTGTA+TGG - chr8_3:49901013-49901032 Msa1293040:intron 10.0%
!! TTCAAAAAAAAAAAAAAGAT+AGG + chr8_3:49901370-49901389 None:intergenic 10.0%
!!! TATCTTTTTTTTTTTTTTGA+AGG - chr8_3:49901369-49901388 Msa1293040:intron 10.0%
!! TAATAAAATTGCAATAAAAA+CGG + chr8_3:49902414-49902433 None:intergenic 10.0%
!! TTATTAAAAAAGCTTAAATA+TGG - chr8_3:49902428-49902447 Msa1293040:CDS 10.0%
!!! TATATCTATCTATTCTAAAA+TGG + chr8_3:49896849-49896868 None:intergenic 15.0%
!! AAATATTTATTCCTAATAGA+TGG - chr8_3:49898066-49898085 Msa1293040:intron 15.0%
!!! ATTTAGGTTTAGTATTTAAA+AGG - chr8_3:49899226-49899245 Msa1293040:intron 15.0%
!!! TTTAGGTTTAGTATTTAAAA+GGG - chr8_3:49899227-49899246 Msa1293040:intron 15.0%
!!! ATGGTCAAATTTTTTTATTT+GGG + chr8_3:49899337-49899356 None:intergenic 15.0%
!!! TATGGTCAAATTTTTTTATT+TGG + chr8_3:49899338-49899357 None:intergenic 15.0%
!! ATAATCAAAATCATGTAAAA+TGG - chr8_3:49899495-49899514 Msa1293040:intron 15.0%
!! TAATCAAAATCATGTAAAAT+GGG - chr8_3:49899496-49899515 Msa1293040:intron 15.0%
!!! ATATCAAAATTATTTAGTTC+AGG + chr8_3:49899873-49899892 None:intergenic 15.0%
!! TTAAATTTATTACATAAAGG+GGG - chr8_3:49900045-49900064 Msa1293040:intron 15.0%
!! ATATAGAAAATGATATATCT+TGG + chr8_3:49900266-49900285 None:intergenic 15.0%
!! TATTATCTAGTAGTATTATA+CGG - chr8_3:49900545-49900564 Msa1293040:intron 15.0%
!!! TATATTTTGTGTTTACAATA+AGG - chr8_3:49900883-49900902 Msa1293040:intron 15.0%
!! GTTAGTTGTATATAATTAAT+TGG - chr8_3:49902068-49902087 Msa1293040:CDS 15.0%
!! AATAAAATTGCAATAAAAAC+GGG + chr8_3:49902413-49902432 None:intergenic 15.0%
!!! TTGAATGTAATCACATTTTT+CGG - chr8_3:49896484-49896503 Msa1293040:CDS 20.0%
!! TCCATTTCTCAAATTATTAT+TGG - chr8_3:49896603-49896622 Msa1293040:intron 20.0%
!! ACCAATAATAATTTGAGAAA+TGG + chr8_3:49896607-49896626 None:intergenic 20.0%
!! ACATAAAAATCGCTATATAA+TGG - chr8_3:49896727-49896746 Msa1293040:intron 20.0%
!!! TTAGTCATTTTGTTATGATA+TGG + chr8_3:49897497-49897516 None:intergenic 20.0%
!! TTAGGAATAAATATTTCAGA+CGG + chr8_3:49898062-49898081 None:intergenic 20.0%
!!! ACAATTTGCATACTTTTTTT+AGG + chr8_3:49898294-49898313 None:intergenic 20.0%
!!! TAAAAAAAGTATGCAAATTG+TGG - chr8_3:49898293-49898312 Msa1293040:intron 20.0%
!! ATAAAGTCTAAACAGAAAAT+GGG + chr8_3:49898638-49898657 None:intergenic 20.0%
!! TATAAAGTCTAAACAGAAAA+TGG + chr8_3:49898639-49898658 None:intergenic 20.0%
!! TTCCTTAGATTCAAATATTT+AGG - chr8_3:49899210-49899229 Msa1293040:CDS 20.0%
!! AACCTAAATATTTGAATCTA+AGG + chr8_3:49899215-49899234 None:intergenic 20.0%
!!! AAATTTTTTTATTTGGGCAA+TGG + chr8_3:49899331-49899350 None:intergenic 20.0%
!!! AACATTATAAGAGTACTTTA+CGG + chr8_3:49899567-49899586 None:intergenic 20.0%
!! TATTTCACTATAAATTCTTC+TGG - chr8_3:49900231-49900250 Msa1293040:intron 20.0%
!! TTCATAGAACATAATAAAAC+AGG - chr8_3:49900465-49900484 Msa1293040:intron 20.0%
!! TGGAGTAAGAAAAAAAAAAT+TGG - chr8_3:49900747-49900766 Msa1293040:intron 20.0%
!! TCTATATTGTGAAATATTCT+TGG - chr8_3:49900843-49900862 Msa1293040:intron 20.0%
!! AGAATAAATCTTTCTATTCA+TGG + chr8_3:49901055-49901074 None:intergenic 20.0%
!! CAATTATAACACAAACAAAT+AGG + chr8_3:49901407-49901426 None:intergenic 20.0%
!! CTATTTGTTTGTGTTATAAT+TGG - chr8_3:49901405-49901424 Msa1293040:intron 20.0%
!! TTTCTAATTCATATCATATC+TGG - chr8_3:49901428-49901447 Msa1293040:intron 20.0%
!!! ATATAATTCGTTGATAACAT+TGG - chr8_3:49901456-49901475 Msa1293040:intron 20.0%
!!! ATGATTTTACATTGTTAATC+AGG - chr8_3:49901494-49901513 Msa1293040:intron 20.0%
!! ATTAAATTCTTCTAGCAATA+AGG + chr8_3:49901618-49901637 None:intergenic 20.0%
!! TTGCTAGAAGAATTTAATAT+TGG - chr8_3:49901620-49901639 Msa1293040:intron 20.0%
!! ATAAAATTGCAATAAAAACG+GGG + chr8_3:49902412-49902431 None:intergenic 20.0%
! TAGAACTTTATTCAAAACCT+TGG - chr8_3:49896765-49896784 Msa1293040:intron 25.0%
! GATAGATATATTGTGAATTG+TGG - chr8_3:49896859-49896878 Msa1293040:intron 25.0%
! TACATTGTCTTCAAGAAATA+AGG + chr8_3:49897349-49897368 None:intergenic 25.0%
! ACTAAAATTATTGGACTTTC+CGG + chr8_3:49897560-49897579 None:intergenic 25.0%
! ACTACTTTGTAAAACTATGT+AGG - chr8_3:49897609-49897628 Msa1293040:intron 25.0%
!!! TATTCTCTTTAGGATAGTTT+CGG - chr8_3:49897783-49897802 Msa1293040:intron 25.0%
! ATTATAGTCAACATCCAATT+TGG - chr8_3:49897890-49897909 Msa1293040:intron 25.0%
! AATGTAGTTATGATGTAAGT+AGG + chr8_3:49897992-49898011 None:intergenic 25.0%
! TAGGAATAAATATTTCAGAC+GGG + chr8_3:49898061-49898080 None:intergenic 25.0%
! ATTCCTAATAGATGGTTTAT+TGG - chr8_3:49898074-49898093 Msa1293040:intron 25.0%
!!! TTCAAGTTGAATGTATTGTT+AGG - chr8_3:49898448-49898467 Msa1293040:intron 25.0%
!!! TCAAGTTGAATGTATTGTTA+GGG - chr8_3:49898449-49898468 Msa1293040:intron 25.0%
! TTCATTAGTTAGGTAAATAG+TGG - chr8_3:49898515-49898534 Msa1293040:intron 25.0%
!! TAAATAGTGGAAATCAGATT+GGG - chr8_3:49898528-49898547 Msa1293040:intron 25.0%
! TCACAAGCTATAAATTATAC+GGG + chr8_3:49898564-49898583 None:intergenic 25.0%
! CTCACAAGCTATAAATTATA+CGG + chr8_3:49898565-49898584 None:intergenic 25.0%
! TAAAGTCTAAACAGAAAATG+GGG + chr8_3:49898637-49898656 None:intergenic 25.0%
! GATAGAAAGAATTAAAGGAT+GGG + chr8_3:49898685-49898704 None:intergenic 25.0%
! AGATAGAAAGAATTAAAGGA+TGG + chr8_3:49898686-49898705 None:intergenic 25.0%
! ATCCTTTAATTCTTTCTATC+TGG - chr8_3:49898685-49898704 Msa1293040:intron 25.0%
! TCCTTTAATTCTTTCTATCT+GGG - chr8_3:49898686-49898705 Msa1293040:intron 25.0%
! CAACAAAATCTATATCTGTT+AGG + chr8_3:49898734-49898753 None:intergenic 25.0%
!!! TGTATAAGTTTTGGATAAAC+AGG + chr8_3:49898995-49899014 None:intergenic 25.0%
! TTGTTGCCAATATGTAAATT+AGG - chr8_3:49899076-49899095 Msa1293040:CDS 25.0%
! TGGTTACCTAATTTACATAT+TGG + chr8_3:49899085-49899104 None:intergenic 25.0%
! GAGATCTAAAAGTTAATAGA+TGG + chr8_3:49899105-49899124 None:intergenic 25.0%
! TTGATATTGCATTCTACTTT+AGG - chr8_3:49899585-49899604 Msa1293040:intron 25.0%
! TGATATTGCATTCTACTTTA+GGG - chr8_3:49899586-49899605 Msa1293040:intron 25.0%
! CCTAATTTCTTATAATCACT+GGG + chr8_3:49899774-49899793 None:intergenic 25.0%
! ACCTAATTTCTTATAATCAC+TGG + chr8_3:49899775-49899794 None:intergenic 25.0%
! AGAATTAATTCAAAGTGTAG+AGG - chr8_3:49899915-49899934 Msa1293040:intron 25.0%
! GAATTAATTCAAAGTGTAGA+GGG - chr8_3:49899916-49899935 Msa1293040:intron 25.0%
!!! AGCTCTATCTTTTAATTTCA+AGG - chr8_3:49900188-49900207 Msa1293040:intron 25.0%
! ATAGTGAAATAATCATTCCT+TGG + chr8_3:49900222-49900241 None:intergenic 25.0%
! AAAATGATATATCTTGGTAG+TGG + chr8_3:49900260-49900279 None:intergenic 25.0%
!! TTTTCTATATTACAGCTCTA+GGG - chr8_3:49900369-49900388 Msa1293040:intron 25.0%
! TACTACAACAAAATATGCTT+TGG - chr8_3:49900415-49900434 Msa1293040:intron 25.0%
! AATAATTGCAGCAATACTTA+AGG + chr8_3:49900529-49900548 None:intergenic 25.0%
!! ATTTTCTAAATCCCTTGTAA+TGG + chr8_3:49900715-49900734 None:intergenic 25.0%
! ACAAGGGATTTAGAAAATAA+AGG - chr8_3:49900717-49900736 Msa1293040:intron 25.0%
!! TAGAAAATAAAGGTATGTGT+TGG - chr8_3:49900727-49900746 Msa1293040:intron 25.0%
! TTTGTGCTTAAAACAGAATA+GGG - chr8_3:49900942-49900961 Msa1293040:intron 25.0%
! TACATACAATGACAATTGTT+TGG - chr8_3:49901186-49901205 Msa1293040:intron 25.0%
! ACATACAATGACAATTGTTT+GGG - chr8_3:49901187-49901206 Msa1293040:intron 25.0%
! AACCTTTATAATGTGATGAT+GGG - chr8_3:49901210-49901229 Msa1293040:intron 25.0%
! TATATGATCATCTATGACAT+TGG + chr8_3:49901341-49901360 None:intergenic 25.0%
! TCAAATTTATACCTTCAAGA+TGG - chr8_3:49901749-49901768 Msa1293040:intron 25.0%
! AGAAAAATAATTACGTGCTT+TGG - chr8_3:49902104-49902123 Msa1293040:CDS 25.0%
! GTTTGTAATATTTGGAGTTG+CGG + chr8_3:49895836-49895855 None:intergenic 30.0%
!! ATAGCAATTGGTTTCACTTT+TGG + chr8_3:49895981-49896000 None:intergenic 30.0%
TGTTAAGAAAGTTGAAATGC+CGG - chr8_3:49896136-49896155 Msa1293040:CDS 30.0%
TGTTGTAAAAACAGAACACA+GGG + chr8_3:49896710-49896729 None:intergenic 30.0%
ATGTTGTAAAAACAGAACAC+AGG + chr8_3:49896711-49896730 None:intergenic 30.0%
GATATATTGTGAATTGTGGA+AGG - chr8_3:49896863-49896882 Msa1293040:intron 30.0%
GCAAACATTATCCATATCAA+CGG + chr8_3:49897032-49897051 None:intergenic 30.0%
AATTTCAAACCTCAATATGG+CGG + chr8_3:49897054-49897073 None:intergenic 30.0%
ACCAATTTCAAACCTCAATA+TGG + chr8_3:49897057-49897076 None:intergenic 30.0%
! TTATGCAAGTGTTGTTATGT+TGG + chr8_3:49897114-49897133 None:intergenic 30.0%
TGATTATAGATTGTGCACAA+CGG - chr8_3:49897147-49897166 Msa1293040:intron 30.0%
!!! TGTGCTAAGACTGTTTTTAA+TGG - chr8_3:49897214-49897233 Msa1293040:intron 30.0%
! ATGAATAGGATTTTCTGTAC+AGG + chr8_3:49897255-49897274 None:intergenic 30.0%
GTCAATTATCCATTTGTGAA+GGG + chr8_3:49897327-49897346 None:intergenic 30.0%
ATGTTTATATGAAGGATGGT+TGG + chr8_3:49897464-49897483 None:intergenic 30.0%
TGTTAGGCATGTTTATATGA+AGG + chr8_3:49897472-49897491 None:intergenic 30.0%
! TTGTTATGATATGGAGTGTT+AGG + chr8_3:49897488-49897507 None:intergenic 30.0%
TGTCATCAACCATTATTTGA+TGG - chr8_3:49897532-49897551 Msa1293040:intron 30.0%
!! TAGTTTTACAAAGTAGTCGA+TGG + chr8_3:49897606-49897625 None:intergenic 30.0%
CCTACTTATGTCATATACTA+CGG + chr8_3:49897715-49897734 None:intergenic 30.0%
CGTAGTATATGACATAAGTA+GGG - chr8_3:49897713-49897732 Msa1293040:intron 30.0%
GTAGTATATGACATAAGTAG+GGG - chr8_3:49897714-49897733 Msa1293040:intron 30.0%
TAGTATATGACATAAGTAGG+GGG - chr8_3:49897715-49897734 Msa1293040:intron 30.0%
AGTCCAATAAACCATCTATT+AGG + chr8_3:49898080-49898099 None:intergenic 30.0%
TCAAAGTGAAAGATTGGTAA+AGG + chr8_3:49898130-49898149 None:intergenic 30.0%
!! AATTCGGATTTTAGGAAGAA+TGG + chr8_3:49898153-49898172 None:intergenic 30.0%
!!! GCATACTTTTTTTAGGCAAT+GGG + chr8_3:49898287-49898306 None:intergenic 30.0%
!!! TGCATACTTTTTTTAGGCAA+TGG + chr8_3:49898288-49898307 None:intergenic 30.0%
GGCAAAAAATGAACAAGAAA+CGG - chr8_3:49898320-49898339 Msa1293040:intron 30.0%
AGAGCTTATCAAAATCCAAA+GGG - chr8_3:49898343-49898362 Msa1293040:intron 30.0%
! GTAAATAGTGGAAATCAGAT+TGG - chr8_3:49898527-49898546 Msa1293040:intron 30.0%
! AAATAGTGGAAATCAGATTG+GGG - chr8_3:49898529-49898548 Msa1293040:intron 30.0%
! ATTTATAGCTTGTGAGTGAA+AGG - chr8_3:49898569-49898588 Msa1293040:intron 30.0%
ACCCAGATAGAAAGAATTAA+AGG + chr8_3:49898690-49898709 None:intergenic 30.0%
AATGTTTATACTGTCATGAC+AGG - chr8_3:49898850-49898869 Msa1293040:intron 30.0%
CAGATGAATTAAGGATGAAA+GGG - chr8_3:49899047-49899066 Msa1293040:CDS 30.0%
GGTTTAGTATTTAAAAGGGT+TGG - chr8_3:49899231-49899250 Msa1293040:intron 30.0%
!!! AGATGCTTTTGACTTCTTAA+GGG - chr8_3:49899360-49899379 Msa1293040:intron 30.0%
GATATTGCATTCTACTTTAG+GGG - chr8_3:49899587-49899606 Msa1293040:intron 30.0%
GAACATCTCATTTATTTGTG+TGG - chr8_3:49899648-49899667 Msa1293040:intron 30.0%
! TGTTGTGTATACTCCATTTT+TGG + chr8_3:49899682-49899701 None:intergenic 30.0%
AGTATACACAACACTTGTAA+AGG - chr8_3:49899689-49899708 Msa1293040:intron 30.0%
CCCAGTGATTATAAGAAATT+AGG - chr8_3:49899771-49899790 Msa1293040:intron 30.0%
CAGAATAAATGTACATGCTT+AGG - chr8_3:49899963-49899982 Msa1293040:intron 30.0%
! TTTTCATGTTTTCATCTCTC+TGG - chr8_3:49900145-49900164 Msa1293040:intron 30.0%
AAATAATCATTCCTTGGCAA+GGG + chr8_3:49900216-49900235 None:intergenic 30.0%
! CTTTTCTATATTACAGCTCT+AGG - chr8_3:49900368-49900387 Msa1293040:intron 30.0%
! GCAATTTGATCATTTTGCTT+TGG - chr8_3:49900571-49900590 Msa1293040:intron 30.0%
!! ATGATGAACAAGTACTGATT+TGG - chr8_3:49900628-49900647 Msa1293040:intron 30.0%
TACTGTAGAAGAATTCCATT+CGG + chr8_3:49900807-49900826 None:intergenic 30.0%
TTATAAGCAATCTCGTATCT+AGG - chr8_3:49900909-49900928 Msa1293040:intron 30.0%
GTTTGTGCTTAAAACAGAAT+AGG - chr8_3:49900941-49900960 Msa1293040:intron 30.0%
TTGTGCTTAAAACAGAATAG+GGG - chr8_3:49900943-49900962 Msa1293040:intron 30.0%
CTTTGTATGGATTTCTTCTA+TGG - chr8_3:49901026-49901045 Msa1293040:intron 30.0%
TGGCTGAATTAGATTATAAG+TGG - chr8_3:49901135-49901154 Msa1293040:CDS 30.0%
GAACCTTTATAATGTGATGA+TGG - chr8_3:49901209-49901228 Msa1293040:intron 30.0%
! ACCTTTATAATGTGATGATG+GGG - chr8_3:49901211-49901230 Msa1293040:intron 30.0%
TTTACATTGTTAATCAGGTG+AGG - chr8_3:49901499-49901518 Msa1293040:intron 30.0%
! TCCACAGAGATAACATTTTT+GGG + chr8_3:49901571-49901590 None:intergenic 30.0%
! TTCCACAGAGATAACATTTT+TGG + chr8_3:49901572-49901591 None:intergenic 30.0%
CGATGAGTTTAATGATATAG+TGG - chr8_3:49901871-49901890 Msa1293040:CDS 30.0%
TAAGCTCAAACTAAGACAAA+AGG - chr8_3:49901940-49901959 Msa1293040:CDS 30.0%
TGTGTAAATTAGCAAATAGC+TGG - chr8_3:49902009-49902028 Msa1293040:CDS 30.0%
!! CAAAGTTCTGAAACAAAAAG+AGG + chr8_3:49902226-49902245 None:intergenic 30.0%
!! GGTGATGGGTTTGTAATATT+TGG + chr8_3:49895844-49895863 None:intergenic 35.0%
TAACTGAACTGAAACTCGAA+GGG + chr8_3:49895948-49895967 None:intergenic 35.0%
!!! TGGTTTCACTTTTGGAGTTT+CGG + chr8_3:49895973-49895992 None:intergenic 35.0%
TTCTTCTTCGACTTCTTCAA+CGG + chr8_3:49896068-49896087 None:intergenic 35.0%
GGATTAAACGAATCAAACAG+CGG + chr8_3:49896095-49896114 None:intergenic 35.0%
GTTAAGAAAGTTGAAATGCC+GGG - chr8_3:49896137-49896156 Msa1293040:CDS 35.0%
TTAAGAAAGTTGAAATGCCG+GGG - chr8_3:49896138-49896157 Msa1293040:CDS 35.0%
ATAAGTAGAGAGGAGATACT+TGG - chr8_3:49896194-49896213 Msa1293040:CDS 35.0%
! AATGCTTGTTAAGCCTATGA+TGG - chr8_3:49896244-49896263 Msa1293040:CDS 35.0%
! GAGATTAACTTGGCGATTAT+CGG + chr8_3:49896270-49896289 None:intergenic 35.0%
GATAATCGCCAAGTTAATCT+CGG - chr8_3:49896269-49896288 Msa1293040:CDS 35.0%
ATGCCTTCAATCAGAAATGT+CGG + chr8_3:49896377-49896396 None:intergenic 35.0%
!! TTTCTGATTGAAGGCATTAG+AGG - chr8_3:49896380-49896399 Msa1293040:CDS 35.0%
AAATCGCTATATAATGGCTC+AGG - chr8_3:49896733-49896752 Msa1293040:intron 35.0%
!!! GGTGTTTGGTTTTGATTTGA+TGG - chr8_3:49896908-49896927 Msa1293040:intron 35.0%
!!! TGGTTTTGATTTGATGGTGT+AGG - chr8_3:49896914-49896933 Msa1293040:intron 35.0%
!! TTTGATTTGATGGTGTAGGA+AGG - chr8_3:49896918-49896937 Msa1293040:intron 35.0%
!! TTGATTTGATGGTGTAGGAA+GGG - chr8_3:49896919-49896938 Msa1293040:intron 35.0%
TGGATTAACGCATAACATGT+TGG - chr8_3:49896943-49896962 Msa1293040:intron 35.0%
!! TGGAGTTGATACATTCACAT+TGG - chr8_3:49896963-49896982 Msa1293040:intron 35.0%
GTCTGCAAAATTCGTTGTAA+AGG - chr8_3:49896998-49897017 Msa1293040:intron 35.0%
ACATTATCCATATCAACGGT+AGG + chr8_3:49897028-49897047 None:intergenic 35.0%
! GCCATATTGAGGTTTGAAAT+TGG - chr8_3:49897053-49897072 Msa1293040:intron 35.0%
GATTATAGATTGTGCACAAC+GGG - chr8_3:49897148-49897167 Msa1293040:intron 35.0%
ATATACCAACCCTTCACAAA+TGG - chr8_3:49897315-49897334 Msa1293040:intron 35.0%
ATTATCCATTTGTGAAGGGT+TGG + chr8_3:49897323-49897342 None:intergenic 35.0%
GGTCAATTATCCATTTGTGA+AGG + chr8_3:49897328-49897347 None:intergenic 35.0%
! CTTTGGTTGTTTGAGACTAT+AGG + chr8_3:49897428-49897447 None:intergenic 35.0%
AGGCATGTTTATATGAAGGA+TGG + chr8_3:49897468-49897487 None:intergenic 35.0%
CCGTAGTATATGACATAAGT+AGG - chr8_3:49897712-49897731 Msa1293040:intron 35.0%
AGGTTCTTACGATGTGTATT+CGG - chr8_3:49897743-49897762 Msa1293040:intron 35.0%
GGACAGAGTATATTCTCTTT+AGG - chr8_3:49897773-49897792 Msa1293040:intron 35.0%
GGACAAAGTATATTCTCTGT+AGG - chr8_3:49897804-49897823 Msa1293040:intron 35.0%
TAGTCAACATCCAATTTGGA+AGG - chr8_3:49897894-49897913 Msa1293040:intron 35.0%
TATGATGTAAGTAGGAGGTT+AGG + chr8_3:49897984-49898003 None:intergenic 35.0%
GTAGTTATGATGTAAGTAGG+AGG + chr8_3:49897989-49898008 None:intergenic 35.0%
GAATGGTCAAAGTGAAAGAT+TGG + chr8_3:49898136-49898155 None:intergenic 35.0%
AATGACTTCATATGCTGTCA+AGG + chr8_3:49898219-49898238 None:intergenic 35.0%
TATTTGTGCTTGGGACAAAA+TGG + chr8_3:49898264-49898283 None:intergenic 35.0%
AAGTATGCAAATTGTGGTCT+TGG - chr8_3:49898299-49898318 Msa1293040:intron 35.0%
GAGAGCTTATCAAAATCCAA+AGG - chr8_3:49898342-49898361 Msa1293040:intron 35.0%
TATCAAAATCCAAAGGGAAG+AGG - chr8_3:49898349-49898368 Msa1293040:intron 35.0%
AACAGGAAGTCTCTCAAAAT+GGG - chr8_3:49898390-49898409 Msa1293040:intron 35.0%
TTGCTCTCAAAGTGGAATTT+GGG + chr8_3:49898420-49898439 None:intergenic 35.0%
TAAAGTCAAGCAAAGACATC+TGG - chr8_3:49898481-49898500 Msa1293040:intron 35.0%
TGTCTGTCAGTTCATTAGTT+AGG - chr8_3:49898505-49898524 Msa1293040:intron 35.0%
AAAGGAAAGATCCATTGTGA+AGG - chr8_3:49898587-49898606 Msa1293040:intron 35.0%
!!! AAGGGTTTTTTCCTTCACAA+TGG + chr8_3:49898601-49898620 None:intergenic 35.0%
ATTGTGAAGGAAAAAACCCT+TGG - chr8_3:49898600-49898619 Msa1293040:intron 35.0%
TTGTGAAGGAAAAAACCCTT+GGG - chr8_3:49898601-49898620 Msa1293040:intron 35.0%
CAACAATCAACTTTCATGCA+CGG + chr8_3:49898800-49898819 None:intergenic 35.0%
AAAATAATTCATCGAGCTGG+CGG - chr8_3:49898887-49898906 Msa1293040:intron 35.0%
!! GGAGCATCTTGTATAAGTTT+TGG + chr8_3:49899004-49899023 None:intergenic 35.0%
AAGCTGAAGCAGATGAATTA+AGG - chr8_3:49899038-49899057 Msa1293040:CDS 35.0%
GCAGATGAATTAAGGATGAA+AGG - chr8_3:49899046-49899065 Msa1293040:CDS 35.0%
GCAATTAATAGCTGTCATTC+TGG - chr8_3:49899271-49899290 Msa1293040:intron 35.0%
!! GAAGTCAAAAGCATCTCATA+TGG + chr8_3:49899356-49899375 None:intergenic 35.0%
!!! GAGATGCTTTTGACTTCTTA+AGG - chr8_3:49899359-49899378 Msa1293040:intron 35.0%
!!! GATGCTTTTGACTTCTTAAG+GGG - chr8_3:49899361-49899380 Msa1293040:intron 35.0%
TTTGAGTGCAGAATCTTAGT+TGG - chr8_3:49899465-49899484 Msa1293040:intron 35.0%
GTTATCTAGTACCTTAAGCT+TGG + chr8_3:49899799-49899818 None:intergenic 35.0%
TAAATGTACATGCTTAGGCT+TGG - chr8_3:49899968-49899987 Msa1293040:intron 35.0%
! GGTTCTGTAGTTGATTAGTT+TGG - chr8_3:49900066-49900085 Msa1293040:intron 35.0%
GAAATAATCATTCCTTGGCA+AGG + chr8_3:49900217-49900236 None:intergenic 35.0%
AAAGCCTGACAACAAAAAGT+AGG + chr8_3:49900352-49900371 None:intergenic 35.0%
! TTTGATCATTTTGCTTTGGC+AGG - chr8_3:49900575-49900594 Msa1293040:intron 35.0%
!! ATGAACAAGTACTGATTTGG+AGG - chr8_3:49900631-49900650 Msa1293040:intron 35.0%
!! TGAACAAGTACTGATTTGGA+GGG - chr8_3:49900632-49900651 Msa1293040:intron 35.0%
! TATTGAAAGTCTTGTCCGAA+TGG - chr8_3:49900789-49900808 Msa1293040:intron 35.0%
TCTCGTATCTAGGTAAGAAA+TGG - chr8_3:49900919-49900938 Msa1293040:intron 35.0%
AGAAATGCATTTGTGCATTG+AGG - chr8_3:49901075-49901094 Msa1293040:CDS 35.0%
! GAGCTAGTTGAAAGTATAGA+TGG - chr8_3:49901115-49901134 Msa1293040:CDS 35.0%
GGCTGAATTAGATTATGAAG+AGG - chr8_3:49901156-49901175 Msa1293040:intron 35.0%
GAATTAGATTATGAAGAGGC+TGG - chr8_3:49901160-49901179 Msa1293040:intron 35.0%
!! CCTTTATAATGTGATGATGG+GGG - chr8_3:49901212-49901231 Msa1293040:intron 35.0%
!! CTTTATAATGTGATGATGGG+GGG - chr8_3:49901213-49901232 Msa1293040:intron 35.0%
CTCGAAATTTCTTCGACATA+GGG - chr8_3:49901287-49901306 Msa1293040:intron 35.0%
TGATCATCTATGACATTGGA+GGG + chr8_3:49901337-49901356 None:intergenic 35.0%
ATGATCATCTATGACATTGG+AGG + chr8_3:49901338-49901357 None:intergenic 35.0%
GAGAAGGTAGAAGAATTTGA+GGG - chr8_3:49901659-49901678 Msa1293040:intron 35.0%
TGAAGAAGTAAATGCTGGAT+AGG + chr8_3:49901708-49901727 None:intergenic 35.0%
TGACTTGAAGAAGTAAATGC+TGG + chr8_3:49901713-49901732 None:intergenic 35.0%
!! TCAAGTCAAACTGCTTTTGA+AGG - chr8_3:49901725-49901744 Msa1293040:intron 35.0%
CAAGACAACTATTCAAGTGA+TGG - chr8_3:49901776-49901795 Msa1293040:intron 35.0%
CATAATCATCAGCATCATCT+AGG + chr8_3:49901802-49901821 None:intergenic 35.0%
AAATCAACTGGTAACAATCC+GGG + chr8_3:49901911-49901930 None:intergenic 35.0%
CAAATCAACTGGTAACAATC+CGG + chr8_3:49901912-49901931 None:intergenic 35.0%
!! TTACCAGTTGATTTGCTTGT+TGG - chr8_3:49901917-49901936 Msa1293040:CDS 35.0%
TTACCAACAAGCAAATCAAC+TGG + chr8_3:49901923-49901942 None:intergenic 35.0%
!!! TATTTTGGAATGGGGATAGG+CGG + chr8_3:49895750-49895769 None:intergenic 40.0%
! TGTAATATTTGGAGTTGCGG+TGG + chr8_3:49895833-49895852 None:intergenic 40.0%
GTAACTGAACTGAAACTCGA+AGG + chr8_3:49895949-49895968 None:intergenic 40.0%
GGTTCAAACGGTAAAAAAGC+CGG + chr8_3:49896011-49896030 None:intergenic 40.0%
TGATTCGTTTAATCCTCCAC+CGG - chr8_3:49896100-49896119 Msa1293040:three_prime_UTR 40.0%
TTAACACCTTTCATCCCATC+CGG + chr8_3:49896122-49896141 None:intergenic 40.0%
TCTCTACTTATCCCTTCTTC+CGG + chr8_3:49896185-49896204 None:intergenic 40.0%
! TCTCGGTGAGTTGGAATTTA+AGG - chr8_3:49896286-49896305 Msa1293040:CDS 40.0%
! CTCGGTGAGTTGGAATTTAA+GGG - chr8_3:49896287-49896306 Msa1293040:CDS 40.0%
!! TGATTGAAGGCATTAGAGGT+AGG - chr8_3:49896384-49896403 Msa1293040:CDS 40.0%
TCAAATTAGTCCTAGCGTCA+AGG + chr8_3:49896451-49896470 None:intergenic 40.0%
TGTTAGACACAGACACATGT+TGG - chr8_3:49896507-49896526 Msa1293040:CDS 40.0%
CAATTGAGACTTCTGATCGA+AGG + chr8_3:49896545-49896564 None:intergenic 40.0%
TGTGTCAATGTCGTGTTTCA+TGG - chr8_3:49896632-49896651 Msa1293040:intron 40.0%
GTGTTTCATGGATGTTAGTG+TGG - chr8_3:49896644-49896663 Msa1293040:intron 40.0%
! CTATATAATGGCTCAGGTTG+TGG - chr8_3:49896739-49896758 Msa1293040:intron 40.0%
CGAGATCTTTACTAGTTCCA+AGG + chr8_3:49896785-49896804 None:intergenic 40.0%
TTGTGAATTGTGGAAGGTGA+AGG - chr8_3:49896869-49896888 Msa1293040:intron 40.0%
TGTGAATTGTGGAAGGTGAA+GGG - chr8_3:49896870-49896889 Msa1293040:intron 40.0%
TGGACTGTGTTAATGGTGTT+TGG - chr8_3:49896894-49896913 Msa1293040:intron 40.0%
TAATGTTTGCCGCCATATTG+AGG - chr8_3:49897042-49897061 Msa1293040:intron 40.0%
TTCTGTACAGGATCATCAGA+AGG + chr8_3:49897243-49897262 None:intergenic 40.0%
CCTGATGCATTTGCATGAAT+AGG + chr8_3:49897269-49897288 None:intergenic 40.0%
CCTATTCATGCAAATGCATC+AGG - chr8_3:49897266-49897285 Msa1293040:intron 40.0%
! CAACCATTATTTGATGGCAC+CGG - chr8_3:49897538-49897557 Msa1293040:intron 40.0%
!! TTTCCGGTGCCATCAAATAA+TGG + chr8_3:49897544-49897563 None:intergenic 40.0%
AGTTGTGTATTTCGTCATGC+AGG - chr8_3:49897634-49897653 Msa1293040:intron 40.0%
TGTAGGAGTTCATCAACTCT+GGG - chr8_3:49897821-49897840 Msa1293040:intron 40.0%
CTGGAGTATACCTTCCAAAT+TGG + chr8_3:49897907-49897926 None:intergenic 40.0%
! TTTGGAAGGTATACTCCAGA+AGG - chr8_3:49897908-49897927 Msa1293040:intron 40.0%
GGTTAGGAAGTAGTTATGGT+GGG + chr8_3:49897968-49897987 None:intergenic 40.0%
AGGTTAGGAAGTAGTTATGG+TGG + chr8_3:49897969-49897988 None:intergenic 40.0%
AGGAGGTTAGGAAGTAGTTA+TGG + chr8_3:49897972-49897991 None:intergenic 40.0%
! GGAAGTATAACTCTGCTATG+AGG + chr8_3:49898032-49898051 None:intergenic 40.0%
! GGACTCTGAATTCGGATTTT+AGG + chr8_3:49898161-49898180 None:intergenic 40.0%
GCAATGTTACAAATCCGACT+TGG + chr8_3:49898182-49898201 None:intergenic 40.0%
AAATCCAAAGGGAAGAGGAA+TGG - chr8_3:49898354-49898373 Msa1293040:intron 40.0%
CAACAGGAAGTCTCTCAAAA+TGG - chr8_3:49898389-49898408 Msa1293040:intron 40.0%
TGCTCTCAAAGTGGAATTTG+GGG + chr8_3:49898419-49898438 None:intergenic 40.0%
CTTGCTCTCAAAGTGGAATT+TGG + chr8_3:49898421-49898440 None:intergenic 40.0%
! CAAATTCCACTTTGAGAGCA+AGG - chr8_3:49898419-49898438 Msa1293040:intron 40.0%
TGTGAAGGAAAAAACCCTTG+GGG - chr8_3:49898602-49898621 Msa1293040:intron 40.0%
GGGAAAATAATTCATCGAGC+TGG - chr8_3:49898884-49898903 Msa1293040:intron 40.0%
! GGTGTAGTTTATCTTTTCCG+TGG - chr8_3:49898908-49898927 Msa1293040:intron 40.0%
GGTAGTTGTAATTTCTGCCA+CGG + chr8_3:49898928-49898947 None:intergenic 40.0%
CTTATACAAGATGCTCCAGA+AGG - chr8_3:49899007-49899026 Msa1293040:CDS 40.0%
TCAGCTTTCGTTAATCCTTC+TGG + chr8_3:49899025-49899044 None:intergenic 40.0%
TCTTAAGGGGATTGTCAAGA+AGG - chr8_3:49899374-49899393 Msa1293040:intron 40.0%
TGTCAAGAAGGAACATCTCT+TGG - chr8_3:49899386-49899405 Msa1293040:intron 40.0%
! GATGTCAGAGATGCTTTTGA+AGG - chr8_3:49899711-49899730 Msa1293040:intron 40.0%
!! TGCTTTTGAAGGAAGCCATT+TGG - chr8_3:49899722-49899741 Msa1293040:intron 40.0%
TGCAGTCAATCTTCACCAAA+TGG + chr8_3:49899740-49899759 None:intergenic 40.0%
TTTGGTGAAGATTGACTGCA+AGG - chr8_3:49899740-49899759 Msa1293040:intron 40.0%
TTGGTGAAGATTGACTGCAA+GGG - chr8_3:49899741-49899760 Msa1293040:intron 40.0%
GAAATTAGGTGCCAAGCTTA+AGG - chr8_3:49899785-49899804 Msa1293040:intron 40.0%
GGAACCTACATTATGCTCAA+AGG - chr8_3:49899937-49899956 Msa1293040:intron 40.0%
GCATCCTTTGAGCATAATGT+AGG + chr8_3:49899944-49899963 None:intergenic 40.0%
TTGGATAGAGAACAAACGCT+TGG + chr8_3:49900017-49900036 None:intergenic 40.0%
AGCTAGCAAAGTTCATGTGA+AGG - chr8_3:49900093-49900112 Msa1293040:intron 40.0%
GCTAGCAAAGTTCATGTGAA+GGG - chr8_3:49900094-49900113 Msa1293040:intron 40.0%
! TCATGTGAAGGGTATGATTG+AGG - chr8_3:49900105-49900124 Msa1293040:intron 40.0%
TGTGTTACAGTGTTGTACAC+TGG - chr8_3:49900303-49900322 Msa1293040:intron 40.0%
!!! TCAGCCTACTTTTTGTTGTC+AGG - chr8_3:49900345-49900364 Msa1293040:intron 40.0%
!! TCTATATTACAGCTCTAGGG+AGG - chr8_3:49900372-49900391 Msa1293040:intron 40.0%
! CATTTTGCTTTGGCAGGATT+TGG - chr8_3:49900581-49900600 Msa1293040:intron 40.0%
TCGAAAGACAATAGCACACA+AGG + chr8_3:49900609-49900628 None:intergenic 40.0%
!! GAACAAGTACTGATTTGGAG+GGG - chr8_3:49900633-49900652 Msa1293040:intron 40.0%
TGCTGAAGCTACCATTACAA+GGG - chr8_3:49900701-49900720 Msa1293040:intron 40.0%
! GCATTTGTGCATTGAGGTTT+TGG - chr8_3:49901081-49901100 Msa1293040:CDS 40.0%
CCCCCATCATCACATTATAA+AGG + chr8_3:49901215-49901234 None:intergenic 40.0%
GAATAGAAGTTTCCCAGACA+GGG - chr8_3:49901243-49901262 Msa1293040:intron 40.0%
CCTATGTCGAAGAAATTTCG+AGG + chr8_3:49901289-49901308 None:intergenic 40.0%
CCTCGAAATTTCTTCGACAT+AGG - chr8_3:49901286-49901305 Msa1293040:intron 40.0%
ACATTGTTAATCAGGTGAGG+TGG - chr8_3:49901502-49901521 Msa1293040:intron 40.0%
ATCTAAGCACATCAGCGAAA+TGG - chr8_3:49901535-49901554 Msa1293040:intron 40.0%
GCCCAAAAATGTTATCTCTG+TGG - chr8_3:49901567-49901586 Msa1293040:intron 40.0%
GGAGAAGGTAGAAGAATTTG+AGG - chr8_3:49901658-49901677 Msa1293040:intron 40.0%
TGTCTTGTGTACCATCTTGA+AGG + chr8_3:49901763-49901782 None:intergenic 40.0%
CACCTTGAAACACCTATCCA+TGG - chr8_3:49895623-49895642 Msa1293040:three_prime_UTR 45.0%
CACCATGGATAGGTGTTTCA+AGG + chr8_3:49895628-49895647 None:intergenic 45.0%
ATGCAACTAGCACCATGGAT+AGG + chr8_3:49895638-49895657 None:intergenic 45.0%
GGATAATGCAACTAGCACCA+TGG + chr8_3:49895643-49895662 None:intergenic 45.0%
!!! GGGTATTTTGGAATGGGGAT+AGG + chr8_3:49895753-49895772 None:intergenic 45.0%
ACCAATTGCTATCCGTGAAC+CGG - chr8_3:49895989-49896008 Msa1293040:three_prime_UTR 45.0%
! ACGGTAAAAAAGCCGGTTCA+CGG + chr8_3:49896004-49896023 None:intergenic 45.0%
TTGGGAAGTTTCCGGAAGAA+GGG - chr8_3:49896171-49896190 Msa1293040:CDS 45.0%
GGAAGAAGGGATAAGTAGAG+AGG - chr8_3:49896184-49896203 Msa1293040:CDS 45.0%
CCAACTCACCGAGATTAACT+TGG + chr8_3:49896280-49896299 None:intergenic 45.0%
CCAAGTTAATCTCGGTGAGT+TGG - chr8_3:49896277-49896296 Msa1293040:CDS 45.0%
CAGAAATGTCGGTGCATCAT+AGG + chr8_3:49896366-49896385 None:intergenic 45.0%
! GCACCGACATTTCTGATTGA+AGG - chr8_3:49896371-49896390 Msa1293040:CDS 45.0%
! ATGGATGTTAGTGTGGACTG+TGG - chr8_3:49896651-49896670 Msa1293040:intron 45.0%
! GTGGACTGTGGTTGCTTTAT+TGG - chr8_3:49896663-49896682 Msa1293040:intron 45.0%
AATTGTGGAAGGTGAAGGGT+TGG - chr8_3:49896874-49896893 Msa1293040:intron 45.0%
GAAGGGTTGGACTGTGTTAA+TGG - chr8_3:49896887-49896906 Msa1293040:intron 45.0%
!! TTTGATGGTGTAGGAAGGGA+TGG - chr8_3:49896923-49896942 Msa1293040:intron 45.0%
AGGTGTTCCTACCGTTGATA+TGG - chr8_3:49897018-49897037 Msa1293040:intron 45.0%
CATCAGGTTCCATCTTCGTA+AGG - chr8_3:49897282-49897301 Msa1293040:intron 45.0%
GTTACCAAGCCTTACGAAGA+TGG + chr8_3:49897294-49897313 None:intergenic 45.0%
AATGTAACCCCCTCTCATTC+TGG - chr8_3:49897363-49897382 Msa1293040:intron 45.0%
AGCAGAGATCCAGAATGAGA+GGG + chr8_3:49897375-49897394 None:intergenic 45.0%
AAGCAGAGATCCAGAATGAG+AGG + chr8_3:49897376-49897395 None:intergenic 45.0%
! TTGGTGTCTAGTTCGAGCTT+TGG + chr8_3:49897445-49897464 None:intergenic 45.0%
CGATGTGTATTCGGTAGTTC+TGG - chr8_3:49897752-49897771 Msa1293040:intron 45.0%
CTGTAGGAGTTCATCAACTC+TGG - chr8_3:49897820-49897839 Msa1293040:intron 45.0%
TCCAGAAGGATGTACAGCAT+AGG - chr8_3:49897922-49897941 Msa1293040:intron 45.0%
TCCTATGCTGTACATCCTTC+TGG + chr8_3:49897926-49897945 None:intergenic 45.0%
CTGCTATGAGGTAGTGACAT+TGG + chr8_3:49898020-49898039 None:intergenic 45.0%
AATATTTCAGACGGGCGTGT+AGG + chr8_3:49898053-49898072 None:intergenic 45.0%
TCCGAATTCAGAGTCCAAGT+CGG - chr8_3:49898165-49898184 Msa1293040:intron 45.0%
!! TCCGACTTGGACTCTGAATT+CGG + chr8_3:49898169-49898188 None:intergenic 45.0%
GGCAATGGGTATTTGTGCTT+GGG + chr8_3:49898273-49898292 None:intergenic 45.0%
AGGCAATGGGTATTTGTGCT+TGG + chr8_3:49898274-49898293 None:intergenic 45.0%
CAAAGGGAAGAGGAATGGTT+GGG - chr8_3:49898359-49898378 Msa1293040:intron 45.0%
ATGGTTGGGAGATGATCAAC+AGG - chr8_3:49898373-49898392 Msa1293040:intron 45.0%
! ATTCCACTTTGAGAGCAAGG+TGG - chr8_3:49898422-49898441 Msa1293040:intron 45.0%
TAGTGGAAATCAGATTGGGG+AGG - chr8_3:49898532-49898551 Msa1293040:intron 45.0%
AGTGGAAATCAGATTGGGGA+GGG - chr8_3:49898533-49898552 Msa1293040:intron 45.0%
GTGAAGGAAAAAACCCTTGG+GGG - chr8_3:49898603-49898622 Msa1293040:intron 45.0%
TGGGGAATAAAATCCCCCAA+GGG + chr8_3:49898619-49898638 None:intergenic 45.0%
ATGGGGAATAAAATCCCCCA+AGG + chr8_3:49898620-49898639 None:intergenic 45.0%
TGTCATGACAGGAGAAAGCA+GGG - chr8_3:49898861-49898880 Msa1293040:intron 45.0%
TTTGGATAAACAGGAGCAGC+TGG + chr8_3:49898986-49899005 None:intergenic 45.0%
TCTGCACTCAAATCTTCTGC+AGG + chr8_3:49899457-49899476 None:intergenic 45.0%
!! TGTGGTGTTGCAGCCAAAAA+TGG - chr8_3:49899666-49899685 Msa1293040:intron 45.0%
GAAGATTGACTGCAAGGGAT+TGG - chr8_3:49899746-49899765 Msa1293040:intron 45.0%
! ATTTCAAGGTACCCTTGCCA+AGG - chr8_3:49900202-49900221 Msa1293040:intron 45.0%
CACTGGCACGATAATTAGTC+TGG - chr8_3:49900320-49900339 Msa1293040:intron 45.0%
!! ATATTACAGCTCTAGGGAGG+AGG - chr8_3:49900375-49900394 Msa1293040:intron 45.0%
!! TATTACAGCTCTAGGGAGGA+GGG - chr8_3:49900376-49900395 Msa1293040:intron 45.0%
! TGATTTGGAGGGGCAAAGAT+TGG - chr8_3:49900643-49900662 Msa1293040:intron 45.0%
GAGGAAAAACTGGAGCTTGA+GGG + chr8_3:49900680-49900699 None:intergenic 45.0%
CTTGTAATGGTAGCTTCAGC+AGG + chr8_3:49900702-49900721 None:intergenic 45.0%
CTGCTGAAGCTACCATTACA+AGG - chr8_3:49900700-49900719 Msa1293040:intron 45.0%
GGAATAGAAGTTTCCCAGAC+AGG - chr8_3:49901242-49901261 Msa1293040:intron 45.0%
TATTGGTCCTGATGCTCTCT+TGG - chr8_3:49901637-49901656 Msa1293040:intron 45.0%
!! AATAAATTTAATGTTTATAT+TGG + chr8_3:49900036-49900055 None:intergenic 5.0%
GAGGAAGATGAGGGGTTGTT+GGG + chr8_3:49895711-49895730 None:intergenic 50.0%
TGAGGAAGATGAGGGGTTGT+TGG + chr8_3:49895712-49895731 None:intergenic 50.0%
!!! GTGGGGGGTATTTTGGAATG+GGG + chr8_3:49895758-49895777 None:intergenic 50.0%
!!! GGTGGGGGGTATTTTGGAAT+GGG + chr8_3:49895759-49895778 None:intergenic 50.0%
!!! AGGTGGGGGGTATTTTGGAA+TGG + chr8_3:49895760-49895779 None:intergenic 50.0%
!! ATGGTAATGGGGTGGGTGAT+GGG + chr8_3:49895858-49895877 None:intergenic 50.0%
TCGGAGGAAGGGATGGTAAT+GGG + chr8_3:49895870-49895889 None:intergenic 50.0%
GGCATTGTGGGAGGTTCAAA+CGG + chr8_3:49896023-49896042 None:intergenic 50.0%
TCGTTTAATCCTCCACCGGA+TGG - chr8_3:49896104-49896123 Msa1293040:three_prime_UTR 50.0%
CGTTTAATCCTCCACCGGAT+GGG - chr8_3:49896105-49896124 Msa1293040:three_prime_UTR 50.0%
GGAAACTTCCCAACCGGAAA+CGG + chr8_3:49896164-49896183 None:intergenic 50.0%
GTTTCCGGTTGGGAAGTTTC+CGG - chr8_3:49896163-49896182 Msa1293040:CDS 50.0%
TCTTCCGGAAACTTCCCAAC+CGG + chr8_3:49896170-49896189 None:intergenic 50.0%
GTTGGGAAGTTTCCGGAAGA+AGG - chr8_3:49896170-49896189 Msa1293040:CDS 50.0%
TTGGTGAGCCGCTTAAGAAG+TGG - chr8_3:49896213-49896232 Msa1293040:CDS 50.0%
TGGTGAGCCGCTTAAGAAGT+GGG - chr8_3:49896214-49896233 Msa1293040:CDS 50.0%
TGCACCTCCCACTTCTTAAG+CGG + chr8_3:49896224-49896243 None:intergenic 50.0%
TGGCGATTATCGGCCATCAT+AGG + chr8_3:49896260-49896279 None:intergenic 50.0%
ACCGACACAGACACAAACAC+CGG - chr8_3:49896411-49896430 Msa1293040:CDS 50.0%
TCCGGTGTTTGTGTCTGTGT+CGG + chr8_3:49896415-49896434 None:intergenic 50.0%
TAGTCCTAGCGTCAAGGTGT+CGG + chr8_3:49896445-49896464 None:intergenic 50.0%
GGTTCCATCTTCGTAAGGCT+TGG - chr8_3:49897287-49897306 Msa1293040:intron 50.0%
CAGAGATCCAGAATGAGAGG+GGG + chr8_3:49897373-49897392 None:intergenic 50.0%
GCAGAGATCCAGAATGAGAG+GGG + chr8_3:49897374-49897393 None:intergenic 50.0%
GACATAAGTAGGGGGCTAAG+AGG - chr8_3:49897723-49897742 Msa1293040:intron 50.0%
CCAACCATTCCTCTTCCCTT+TGG + chr8_3:49898361-49898380 None:intergenic 50.0%
CCAAAGGGAAGAGGAATGGT+TGG - chr8_3:49898358-49898377 Msa1293040:intron 50.0%
CTGTCATGACAGGAGAAAGC+AGG - chr8_3:49898860-49898879 Msa1293040:intron 50.0%
GTCATGACAGGAGAAAGCAG+GGG - chr8_3:49898862-49898881 Msa1293040:intron 50.0%
TCATGACAGGAGAAAGCAGG+GGG - chr8_3:49898863-49898882 Msa1293040:intron 50.0%
CTGGATACTGTGGACGAGTA+CGG + chr8_3:49898949-49898968 None:intergenic 50.0%
! CAGAGCATCACTGGATACTG+TGG + chr8_3:49898959-49898978 None:intergenic 50.0%
CACAGTATCCAGTGATGCTC+TGG - chr8_3:49898957-49898976 Msa1293040:intron 50.0%
CTTGCGACTGCAATCACTCT+AGG + chr8_3:49899177-49899196 None:intergenic 50.0%
CTAGAGTGATTGCAGTCGCA+AGG - chr8_3:49899175-49899194 Msa1293040:CDS 50.0%
GGAGGAAAAACTGGAGCTTG+AGG + chr8_3:49900681-49900700 None:intergenic 50.0%
GCTTCAGCAGGAGGAAAAAC+TGG + chr8_3:49900690-49900709 None:intergenic 50.0%
GTAATGGTAGCTTCAGCAGG+AGG + chr8_3:49900699-49900718 None:intergenic 50.0%
!! TGTGATGATGGGGGGAAATG+AGG - chr8_3:49901221-49901240 Msa1293040:intron 50.0%
TTCACTGCAACTCCCTGTCT+GGG + chr8_3:49901258-49901277 None:intergenic 50.0%
ATTCACTGCAACTCCCTGTC+TGG + chr8_3:49901259-49901278 None:intergenic 50.0%
TTCGACATAGGGAAGCTCTC+TGG - chr8_3:49901298-49901317 Msa1293040:intron 50.0%
TCGACATAGGGAAGCTCTCT+GGG - chr8_3:49901299-49901318 Msa1293040:intron 50.0%
TCCTGATGCTCTCTTGGAGA+AGG - chr8_3:49901643-49901662 Msa1293040:intron 50.0%
!! ACCTTCTCCAAGAGAGCATC+AGG + chr8_3:49901647-49901666 None:intergenic 50.0%
GTGGATACATCAGCTGAACC+CGG - chr8_3:49901890-49901909 Msa1293040:CDS 50.0%
TGGGTGGTAAGGAGGAGAAG+AGG + chr8_3:49895692-49895711 None:intergenic 55.0%
TGAGGGGTTGTTGGGTGGTA+AGG + chr8_3:49895703-49895722 None:intergenic 55.0%
GAAGATGAGGGGTTGTTGGG+TGG + chr8_3:49895708-49895727 None:intergenic 55.0%
! TGGCGGATGAGGAAGATGAG+GGG + chr8_3:49895719-49895738 None:intergenic 55.0%
!! GTGGCGGATGAGGAAGATGA+GGG + chr8_3:49895720-49895739 None:intergenic 55.0%
!!! TTGCGAGGTGGGGGGTATTT+TGG + chr8_3:49895765-49895784 None:intergenic 55.0%
!! TTTGGGTTTGGTGGTGGTGG+GGG + chr8_3:49895795-49895814 None:intergenic 55.0%
!! GTTTGGGTTTGGTGGTGGTG+GGG + chr8_3:49895796-49895815 None:intergenic 55.0%
!! GGTTTGGGTTTGGTGGTGGT+GGG + chr8_3:49895797-49895816 None:intergenic 55.0%
GGAGTTGCGGTGGTGTTTGA+GGG + chr8_3:49895823-49895842 None:intergenic 55.0%
TGGAGTTGCGGTGGTGTTTG+AGG + chr8_3:49895824-49895843 None:intergenic 55.0%
!! GATGGTAATGGGGTGGGTGA+TGG + chr8_3:49895859-49895878 None:intergenic 55.0%
!! GGAAGGGATGGTAATGGGGT+GGG + chr8_3:49895865-49895884 None:intergenic 55.0%
!! AGGAAGGGATGGTAATGGGG+TGG + chr8_3:49895866-49895885 None:intergenic 55.0%
! CGGAGGAAGGGATGGTAATG+GGG + chr8_3:49895869-49895888 None:intergenic 55.0%
GTCGGAGGAAGGGATGGTAA+TGG + chr8_3:49895871-49895890 None:intergenic 55.0%
!! GATGATGACGGAGCGGTTGT+CGG + chr8_3:49895889-49895908 None:intergenic 55.0%
GACAACCGCTCCGTCATCAT+CGG - chr8_3:49895888-49895907 Msa1293040:intron 55.0%
!! ATTCGCCGATGATGACGGAG+CGG + chr8_3:49895896-49895915 None:intergenic 55.0%
TCCGTCATCATCGGCGAATC+CGG - chr8_3:49895897-49895916 Msa1293040:intron 55.0%
GAAACTCGAAGGGAGCTCCA+GGG + chr8_3:49895938-49895957 None:intergenic 55.0%
TGAAACTCGAAGGGAGCTCC+AGG + chr8_3:49895939-49895958 None:intergenic 55.0%
! GCCGGTTCACGGATAGCAAT+TGG + chr8_3:49895993-49896012 None:intergenic 55.0%
TTGAACCTCCCACAATGCCG+AGG - chr8_3:49896024-49896043 Msa1293040:three_prime_UTR 55.0%
AACGGTGCTTTCCCTGTCCA+CGG + chr8_3:49896050-49896069 None:intergenic 55.0%
ACACCTTTCATCCCATCCGG+TGG + chr8_3:49896119-49896138 None:intergenic 55.0%
TGAGCCGCTTAAGAAGTGGG+AGG - chr8_3:49896217-49896236 Msa1293040:CDS 55.0%
!! CAAGGTGTCGGTGTCAAGTC+CGG + chr8_3:49896433-49896452 None:intergenic 55.0%
! CTTCTGATCGAAGGTGCGTC+TGG + chr8_3:49896536-49896555 None:intergenic 55.0%
GCTCCACCTTGCTCTCAAAG+TGG + chr8_3:49898428-49898447 None:intergenic 55.0%
CATGACAGGAGAAAGCAGGG+GGG - chr8_3:49898864-49898883 Msa1293040:intron 55.0%
GTGATTGCAGTCGCAAGGTG+AGG - chr8_3:49899180-49899199 Msa1293040:CDS 55.0%
!! TGCTGGATAGGAGTGCTCTG+TGG + chr8_3:49901696-49901715 None:intergenic 55.0%
TTATCCTCTCCCCTCCCAGC+TGG - chr8_3:49895657-49895676 Msa1293040:intron 60.0%
AGAGGTTCCCCCTACCAGCT+GGG + chr8_3:49895674-49895693 None:intergenic 60.0%
AAGAGGTTCCCCCTACCAGC+TGG + chr8_3:49895675-49895694 None:intergenic 60.0%
GGGGTTGTTGGGTGGTAAGG+AGG + chr8_3:49895700-49895719 None:intergenic 60.0%
!! GGTGGCGGATGAGGAAGATG+AGG + chr8_3:49895721-49895740 None:intergenic 60.0%
AATGGGGATAGGCGGACGTG+GGG + chr8_3:49895742-49895761 None:intergenic 60.0%
GAATGGGGATAGGCGGACGT+GGG + chr8_3:49895743-49895762 None:intergenic 60.0%
! GGTGTGATTTGCGAGGTGGG+GGG + chr8_3:49895773-49895792 None:intergenic 60.0%
! GGGTGTGATTTGCGAGGTGG+GGG + chr8_3:49895774-49895793 None:intergenic 60.0%
! GGGGTGTGATTTGCGAGGTG+GGG + chr8_3:49895775-49895794 None:intergenic 60.0%
! GGGGGTGTGATTTGCGAGGT+GGG + chr8_3:49895776-49895795 None:intergenic 60.0%
!! TTGGGTTTGGTGGTGGTGGG+GGG + chr8_3:49895794-49895813 None:intergenic 60.0%
!! GGGTTTGGGTTTGGTGGTGG+TGG + chr8_3:49895798-49895817 None:intergenic 60.0%
! TTGAGGGCGGGGTTTGGGTT+TGG + chr8_3:49895807-49895826 None:intergenic 60.0%
GGTGTTTGAGGGCGGGGTTT+GGG + chr8_3:49895812-49895831 None:intergenic 60.0%
TGGTGTTTGAGGGCGGGGTT+TGG + chr8_3:49895813-49895832 None:intergenic 60.0%
TTGCGGTGGTGTTTGAGGGC+GGG + chr8_3:49895819-49895838 None:intergenic 60.0%
GTTGCGGTGGTGTTTGAGGG+CGG + chr8_3:49895820-49895839 None:intergenic 60.0%
GCCGGATTCGCCGATGATGA+CGG + chr8_3:49895901-49895920 None:intergenic 60.0%
AGGGAGAAGGTAGGAGACGC+CGG + chr8_3:49895919-49895938 None:intergenic 60.0%
CCTTTCATCCCATCCGGTGG+AGG + chr8_3:49896116-49896135 None:intergenic 60.0%
CCTCCACCGGATGGGATGAA+AGG - chr8_3:49896113-49896132 Msa1293040:three_prime_UTR 60.0%
TGAAATGCCGGGGCCGTTTC+CGG - chr8_3:49896148-49896167 Msa1293040:CDS 60.0%
GACACCGACACCTTGACGCT+AGG - chr8_3:49896438-49896457 Msa1293040:CDS 60.0%
! GCTGGCTTCCAGAGCATCAC+TGG + chr8_3:49898968-49898987 None:intergenic 60.0%
CTCTCCCCTCCCAGCTGGTA+GGG - chr8_3:49895662-49895681 Msa1293040:intron 65.0%
TCTCCCCTCCCAGCTGGTAG+GGG - chr8_3:49895663-49895682 Msa1293040:intron 65.0%
TTCCCCCTACCAGCTGGGAG+GGG + chr8_3:49895669-49895688 None:intergenic 65.0%
GTTCCCCCTACCAGCTGGGA+GGG + chr8_3:49895670-49895689 None:intergenic 65.0%
GGAATGGGGATAGGCGGACG+TGG + chr8_3:49895744-49895763 None:intergenic 65.0%
! GGGGGGTGTGATTTGCGAGG+TGG + chr8_3:49895777-49895796 None:intergenic 65.0%
! GGTGGGGGGTGTGATTTGCG+AGG + chr8_3:49895780-49895799 None:intergenic 65.0%
!! GCGGGGTTTGGGTTTGGTGG+TGG + chr8_3:49895801-49895820 None:intergenic 65.0%
! AGGGCGGGGTTTGGGTTTGG+TGG + chr8_3:49895804-49895823 None:intergenic 65.0%
TGCGGTGGTGTTTGAGGGCG+GGG + chr8_3:49895818-49895837 None:intergenic 65.0%
GCGGTTGTCGGAGGAAGGGA+TGG + chr8_3:49895877-49895896 None:intergenic 65.0%
CGGAGCGGTTGTCGGAGGAA+GGG + chr8_3:49895881-49895900 None:intergenic 65.0%
ACGGAGCGGTTGTCGGAGGA+AGG + chr8_3:49895882-49895901 None:intergenic 65.0%
!! GATGACGGAGCGGTTGTCGG+AGG + chr8_3:49895886-49895905 None:intergenic 65.0%
GGCGTCTCCTACCTTCTCCC+TGG - chr8_3:49895918-49895937 Msa1293040:intron 65.0%
GGGAGCTCCAGGGAGAAGGT+AGG + chr8_3:49895928-49895947 None:intergenic 65.0%
CGAAGGGAGCTCCAGGGAGA+AGG + chr8_3:49895932-49895951 None:intergenic 65.0%
GTCCACGGCCTCGGCATTGT+GGG + chr8_3:49896035-49896054 None:intergenic 65.0%
TGTCCACGGCCTCGGCATTG+TGG + chr8_3:49896036-49896055 None:intergenic 65.0%
ACAATGCCGAGGCCGTGGAC+AGG - chr8_3:49896035-49896054 Msa1293040:three_prime_UTR 65.0%
CAATGCCGAGGCCGTGGACA+GGG - chr8_3:49896036-49896055 Msa1293040:three_prime_UTR 65.0%
GCTTTCCCTGTCCACGGCCT+CGG + chr8_3:49896044-49896063 None:intergenic 65.0%
TTCCCAACCGGAAACGGCCC+CGG + chr8_3:49896158-49896177 None:intergenic 65.0%
CCTACCAGCTGGGAGGGGAG+AGG + chr8_3:49895664-49895683 None:intergenic 70.0%
CCTCTCCCCTCCCAGCTGGT+AGG - chr8_3:49895661-49895680 Msa1293040:intron 70.0%
CTCCCCTCCCAGCTGGTAGG+GGG - chr8_3:49895664-49895683 Msa1293040:intron 70.0%
GGTTCCCCCTACCAGCTGGG+AGG + chr8_3:49895671-49895690 None:intergenic 70.0%
GATAGGCGGACGTGGGGTGG+CGG + chr8_3:49895736-49895755 None:intergenic 70.0%
CACGGCCTCGGCATTGTGGG+AGG + chr8_3:49896032-49896051 None:intergenic 70.0%
CTCCCACAATGCCGAGGCCG+TGG - chr8_3:49896030-49896049 Msa1293040:three_prime_UTR 70.0%
ATGCCGGGGCCGTTTCCGGT+TGG - chr8_3:49896152-49896171 Msa1293040:CDS 70.0%
TGCCGGGGCCGTTTCCGGTT+GGG - chr8_3:49896153-49896172 Msa1293040:CDS 70.0%
!! CGGACGTGGGGTGGCGGATG+AGG + chr8_3:49895730-49895749 None:intergenic 75.0%
GGGGATAGGCGGACGTGGGG+TGG + chr8_3:49895739-49895758 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 49895619 49902483 49895619 ID=Msa1293040;Name=Msa1293040
chr8_3 mRNA 49895619 49902483 49895619 ID=Msa1293040-mRNA-1;Parent=Msa1293040;Name=Msa1293040-mRNA-1;_AED=0.05;_eAED=0.05;_QI=23|0.83|0.85|1|0.83|0.71|7|189|540
chr8_3 exon 49895619 49895649 49895619 ID=Msa1293040-mRNA-1:exon:13873;Parent=Msa1293040-mRNA-1
chr8_3 exon 49895977 49896586 49895977 ID=Msa1293040-mRNA-1:exon:13872;Parent=Msa1293040-mRNA-1
chr8_3 exon 49897364 49897505 49897364 ID=Msa1293040-mRNA-1:exon:13871;Parent=Msa1293040-mRNA-1
chr8_3 exon 49898398 49898423 49898398 ID=Msa1293040-mRNA-1:exon:13870;Parent=Msa1293040-mRNA-1
chr8_3 exon 49899005 49899230 49899005 ID=Msa1293040-mRNA-1:exon:13869;Parent=Msa1293040-mRNA-1
chr8_3 exon 49901039 49901166 49901039 ID=Msa1293040-mRNA-1:exon:13868;Parent=Msa1293040-mRNA-1
chr8_3 exon 49901812 49902483 49901812 ID=Msa1293040-mRNA-1:exon:13867;Parent=Msa1293040-mRNA-1
chr8_3 five_prime_UTR 49902461 49902483 49902461 ID=Msa1293040-mRNA-1:five_prime_utr;Parent=Msa1293040-mRNA-1
chr8_3 CDS 49901812 49902460 49901812 ID=Msa1293040-mRNA-1:cds;Parent=Msa1293040-mRNA-1
chr8_3 CDS 49901039 49901166 49901039 ID=Msa1293040-mRNA-1:cds;Parent=Msa1293040-mRNA-1
chr8_3 CDS 49899005 49899230 49899005 ID=Msa1293040-mRNA-1:cds;Parent=Msa1293040-mRNA-1
chr8_3 CDS 49898398 49898423 49898398 ID=Msa1293040-mRNA-1:cds;Parent=Msa1293040-mRNA-1
chr8_3 CDS 49897364 49897505 49897364 ID=Msa1293040-mRNA-1:cds;Parent=Msa1293040-mRNA-1
chr8_3 CDS 49896135 49896586 49896135 ID=Msa1293040-mRNA-1:cds;Parent=Msa1293040-mRNA-1
chr8_3 three_prime_UTR 49895977 49896134 49895977 ID=Msa1293040-mRNA-1:three_prime_utr;Parent=Msa1293040-mRNA-1
chr8_3 three_prime_UTR 49895619 49895649 49895619 ID=Msa1293040-mRNA-1:three_prime_utr;Parent=Msa1293040-mRNA-1
Gene Sequence

>Msa1293040

ATGGTGCTAGTTGCATTATCCTCTCCCCTCCCAGCTGGTAGGGGGAACCTCTTCTCCTCCTTACCACCCAACAACCCCTCATCTTCCTCATCCGCCACCCCACGTCCGCCTATCCCCATTCCAAAATACCCCCCACCTCGCAAATCACACCCCCCACCACCACCAAACCCAAACCCCGCCCTCAAACACCACCGCAACTCCAAATATTACAAACCCATCACCCACCCCATTACCATCCCTTCCTCCGACAACCGCTCCGTCATCATCGGCGAATCCGGCGTCTCCTACCTTCTCCCTGGAGCTCCCTTCGAGTTTCAGTTCAGTTACTCCGAAACTCCAAAAGTGAAACCAATTGCTATCCGTGAACCGGCTTTTTTACCGTTTGAACCTCCCACAATGCCGAGGCCGTGGACAGGGAAAGCACCGTTGAAGAAGTCGAAGAAGAATATTCCGCTGTTTGATTCGTTTAATCCTCCACCGGATGGGATGAAAGGTGTTAAGAAAGTTGAAATGCCGGGGCCGTTTCCGGTTGGGAAGTTTCCGGAAGAAGGGATAAGTAGAGAGGAGATACTTGGTGAGCCGCTTAAGAAGTGGGAGGTGCAAATGCTTGTTAAGCCTATGATGGCCGATAATCGCCAAGTTAATCTCGGAAGGGATGGATTAACGCATAACATGTTGGAGTTGATACATTCACATTGGAAGCGACGTCGCGTCTGCAAAATTCGTTGTAAAGGTGTTCCTACCGTTGATATGGATAATGTTTGCCGCCATATTGAGGAGAAAGCAGGGGGGAAAATAATTCATCGAGCTGGCGGTGTAGTTTATCTTTTCCGTGGCAGAAATTACAACTACCGTACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTTTATCCAAAACTTATACAAGATGCTCCAGAAGGATTAACGAAAGCTGAAGCAGATGAATTAAGGATGAAAGGGAAAAGCTTGTTGCCAATATGTAAATTAGCCAAAAATGGAGTATACACAACACTTGATTTGGTTCCTTGTGTGCTATTGTCTTTCGATGATGAACAAGTACTGATTTGGAGGGGCAAAGATTGGAAATCAATGTACCCTCAAGCTCCAGTTTTTCCTCCTGCTGAAGCTACCATTACAAGGGATTTAGAAAATAAAGGTGAGGTGGATGATAATCAATCTAAGCACATCAGCGAAATGGTCAGCACAAGCCCAAAAATGTTATCTCTGTGGAAGAGTGCAATTGAGTCAAACAAAGCCTTATTGCTAGAAGAATTTAATATTGGTCCTGATGCTCTCTTGGAGAAGGTAGAAGAATTTGAGGGTATTTCACATGCCACAGAGCACTCCTATCCAGCATTTACTTCTTCAAGTCAAACTGCTTTTGAAGGTTCAAATTTATACCTTCAAGATGGTACACAAGACAACTATTCAAGTGATGGCCTAGATGATGCTGATGATTATGATAATAACAGTGACGACGAAGATGATTATGATTACTACAATGACGAAGACGATGAGTTTAATGATATAGTGGATACATCAGCTGAACCCGGATTGTTACCAGTTGATTTGCTTGTTGGTAAGCTCAAACTAAGACAAAAGGAGTAA
Protein sequence

>Msa1293040

MVLVALSSPLPAGRGNLFSSLPPNNPSSSSSATPRPPIPIPKYPPPRKSHPPPPPNPNPALKHHRNSKYYKPITHPITIPSSDNRSVIIGESGVSYLLPGAPFEFQFSYSETPKVKPIAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPDGMKGVKKVEMPGPFPVGKFPEEGISREEILGEPLKKWEVQMLVKPMMADNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCKGVPTVDMDNVCRHIEEKAGGKIIHRAGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQDAPEGLTKAEADELRMKGKSLLPICKLAKNGVYTTLDLVPCVLLSFDDEQVLIWRGKDWKSMYPQAPVFPPAEATITRDLENKGEVDDNQSKHISEMVSTSPKMLSLWKSAIESNKALLLEEFNIGPDALLEKVEEFEGISHATEHSYPAFTSSSQTAFEGSNLYLQDGTQDNYSSDGLDDADDYDNNSDDEDDYDYYNDEDDEFNDIVDTSAEPGLLPVDLLVGKLKLRQKE*