AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1132900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132900 MtrunA17_Chr5g0399001 96.923 455 14 0 1 455 17 471 0.0 921
Msa1132900 MtrunA17_Chr8g0352461 53.440 436 187 5 17 446 4 429 2.08e-164 470
Msa1132900 MtrunA17_Chr8g0352481 53.302 424 190 4 17 440 4 419 4.79e-161 461
Msa1132900 MtrunA17_Chr3g0091441 47.912 455 212 9 5 446 1 443 9.76e-148 429
Msa1132900 MtrunA17_Chr2g0304651 23.622 254 134 9 15 235 3 229 6.28e-13 70.9
Msa1132900 MtrunA17_Chr2g0305211 23.695 249 126 9 15 228 3 222 6.36e-13 70.9
Msa1132900 MtrunA17_Chr2g0305231 23.695 249 126 9 15 228 3 222 6.36e-13 70.9
Msa1132900 MtrunA17_Chr7g0268611 26.087 230 132 7 17 240 8 205 9.77e-13 69.7
Msa1132900 MtrunA17_Chr7g0268621 23.132 281 179 6 17 295 6 251 1.06e-12 69.3
Msa1132900 MtrunA17_Chr7g0262591 24.034 233 135 6 18 241 25 224 1.96e-12 68.9
Msa1132900 MtrunA17_Chr2g0304721 23.438 256 132 9 15 235 3 229 2.47e-12 68.9
Msa1132900 MtrunA17_Chr1g0182991 24.554 224 138 6 19 240 27 221 4.47e-12 67.8
Msa1132900 MtrunA17_Chr3g0139441 24.898 245 150 7 19 257 41 257 8.78e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132900 AT1G62620.1 61.726 452 162 5 10 454 3 450 0.0 582
Msa1132900 AT1G63370.1 61.504 452 163 5 10 454 3 450 0.0 582
Msa1132900 AT1G62600.1 62.281 456 161 6 4 453 1 451 0.0 571
Msa1132900 AT1G12200.1 60.526 456 169 6 5 453 1 452 0.0 547
Msa1132900 AT1G62560.1 55.408 453 196 3 5 455 1 449 0.0 528
Msa1132900 AT1G12140.1 58.499 453 181 3 5 455 1 448 0.0 528
Msa1132900 AT1G12140.3 58.499 453 181 3 5 455 1 448 0.0 528
Msa1132900 AT1G62580.2 60.044 453 174 6 4 453 1 449 0.0 526
Msa1132900 AT1G62620.2 64.767 386 129 4 10 388 3 388 0.0 523
Msa1132900 AT1G12140.2 58.057 453 181 4 5 455 1 446 0.0 519
Msa1132900 AT1G65860.1 54.846 454 197 5 4 455 1 448 0.0 515
Msa1132900 AT1G62600.2 64.706 391 131 5 4 388 1 390 6.29e-179 506
Msa1132900 AT1G62540.1 56.167 454 191 5 4 455 1 448 2.90e-178 506
Msa1132900 AT1G12160.1 53.289 456 193 4 15 454 10 461 5.23e-177 504
Msa1132900 AT1G62580.1 55.967 486 174 8 4 453 1 482 7.45e-177 504
Msa1132900 AT1G62570.1 56.167 454 191 5 4 455 1 448 7.64e-176 501
Msa1132900 AT1G62540.2 53.445 479 190 6 4 455 1 473 4.90e-174 497
Msa1132900 AT1G62560.2 59.067 386 156 2 5 388 1 386 4.44e-170 483
Msa1132900 AT1G12130.1 53.219 466 185 8 12 454 8 463 3.57e-166 476
Msa1132900 AT1G62540.3 53.304 454 186 7 4 455 1 430 7.85e-164 469
Msa1132900 AT1G63340.1 53.863 453 162 5 4 453 1 409 1.47e-162 466
Msa1132900 AT1G63370.2 63.664 333 114 4 10 335 3 335 3.99e-155 443
Msa1132900 AT5G61290.1 48.758 443 207 8 15 446 14 447 1.44e-149 434
Msa1132900 AT5G07800.1 47.137 454 218 10 15 454 14 459 2.82e-145 423
Msa1132900 AT1G12200.2 64.095 337 113 5 5 334 1 336 7.40e-144 416
Msa1132900 AT1G62580.3 61.449 345 117 5 4 333 1 344 2.96e-133 388
Msa1132900 AT1G63390.1 57.407 162 63 4 4 160 1 161 2.68e-48 163
Msa1132900 AT5G45180.1 23.810 441 214 18 13 363 9 417 3.60e-15 77.8
Msa1132900 AT1G19250.1 28.340 247 121 10 12 228 8 228 6.20e-14 74.3
Msa1132900 AT5G11320.2 23.214 224 136 5 19 240 19 208 3.10e-12 68.2
Msa1132900 AT5G11320.1 23.214 224 136 5 19 240 19 208 5.64e-12 67.8
Msa1132900 AT4G28720.1 24.561 228 138 6 18 240 26 224 4.65e-11 65.1

Find 153 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTGGCGTGAACAATTT+TGG 0.185892 7_3:+85740623 None:intergenic
TTTGCTGGGGTGGGTGAAGG+TGG 0.205048 7_3:-85740185 Msa1132900:CDS
CAATTTGCCTCGGGAGAGTA+TGG 0.242875 7_3:-85740357 Msa1132900:CDS
TAAGAGGCACACTCATAATA+TGG 0.255894 7_3:-85737955 Msa1132900:CDS
AAGAAAATAACCAGGAATAT+TGG 0.264046 7_3:+85740061 None:intergenic
CTCCATGGCTTTCCTTTGTT+GGG 0.291150 7_3:-85738130 Msa1132900:CDS
AAGACAGAGGTGGTGTTTGC+TGG 0.296073 7_3:-85740200 Msa1132900:CDS
ATATTATGAGTGTGCCTCTT+AGG 0.298315 7_3:+85737957 None:intergenic
TAACATGTGGCTTCATTCTA+TGG 0.307413 7_3:-85738740 Msa1132900:intron
TGCAGTGGGACTACAATAAC+TGG 0.310122 7_3:-85737639 Msa1132900:intron
GTGTTTGCTGGGGTGGGTGA+AGG 0.313072 7_3:-85740188 Msa1132900:CDS
CACGGGCTCGGCCAATGTTC+AGG 0.313423 7_3:-85737931 Msa1132900:intron
CATACTCTCCCGAGGCAAAT+TGG 0.320024 7_3:+85740358 None:intergenic
GGGTAGGTTGTAGTTCTAAT+AGG 0.325138 7_3:-85738877 Msa1132900:intron
GCTCGGGTGTTCTGTAATTA+TGG 0.325418 7_3:+85739208 None:intergenic
AGAAAATAACCAGGAATATT+GGG 0.332604 7_3:+85740062 None:intergenic
GCTCCATGGCTTTCCTTTGT+TGG 0.336615 7_3:-85738131 Msa1132900:CDS
GAATGTAAATTATATATGTT+TGG 0.343768 7_3:-85737347 Msa1132900:three_prime_UTR
CCGAGACTTCCCAATATTCC+TGG 0.353788 7_3:-85740071 Msa1132900:intron
AGTGGATAAGCTTCCGGTTC+GGG 0.354622 7_3:+85740405 None:intergenic
ATCATGTTCATTCATGTGAT+AGG 0.359899 7_3:+85740719 None:intergenic
GGGTGGGTGAAGGTGGGAAA+TGG 0.367744 7_3:-85740178 Msa1132900:CDS
GCCGATGACTGCCACGTGGC+GGG 0.373968 7_3:+85740565 None:intergenic
TGGCTATGCATTTGCTTCCC+TGG 0.375441 7_3:+85739228 None:intergenic
AGAGGTGGTGTTTGCTGGGG+TGG 0.381682 7_3:-85740195 Msa1132900:CDS
CTTTGTTGGGTTACCTTGGA+AGG 0.382913 7_3:-85738117 Msa1132900:CDS
ATGGAGAACGCAAATGTATA+TGG 0.387354 7_3:-85737581 Msa1132900:CDS
TGCTACTAAGCCTCCGGCGC+CGG 0.388838 7_3:+85740541 None:intergenic
TGGTTCGGAGTGAATTGTAT+AGG 0.394896 7_3:+85740378 None:intergenic
TACTTGTCACTTGAAGAATC+TGG 0.396469 7_3:-85737984 Msa1132900:CDS
TACTTGATCTTGAAAGGGCT+CGG 0.401139 7_3:+85739191 None:intergenic
AGAAAGGGAGAGATTGTAGA+AGG 0.404469 7_3:-85740301 Msa1132900:CDS
CACTCGGTTTGGACCCGAAC+CGG 0.410482 7_3:-85740418 Msa1132900:CDS
CTTCGAGCGAGGAGAAGAAT+TGG 0.410605 7_3:-85740480 Msa1132900:CDS
GGCTCGAGTGGATAAGCTTC+CGG 0.414887 7_3:+85740399 None:intergenic
GAGGTGGTGTTTGCTGGGGT+GGG 0.423874 7_3:-85740194 Msa1132900:CDS
CTGCAGAGCAAGTGGATAGC+TGG 0.424635 7_3:-85738071 Msa1132900:CDS
GAGTGGATAAGCTTCCGGTT+CGG 0.425312 7_3:+85740404 None:intergenic
AGTGGGTCGGATTCTATCTC+TGG 0.428807 7_3:+85740437 None:intergenic
TTAATAAATGGAAGAATCAA+TGG 0.432279 7_3:+85740651 None:intergenic
GCAGTCATCGGCGCCGGCGC+CGG 0.432692 7_3:-85740554 Msa1132900:CDS
GAGAAGAATTGGGCGGTTCA+TGG 0.435788 7_3:-85740469 Msa1132900:CDS
TTCTTCTAAAAGGGTAATCT+CGG 0.436563 7_3:+85740330 None:intergenic
TCACCACACCATTGGTTTCA+AGG 0.437617 7_3:+85738210 None:intergenic
AGAATCCGACCCACTCGGTT+TGG 0.439148 7_3:-85740429 Msa1132900:CDS
CACGTGGCAGTCATCGGCGC+CGG 0.444457 7_3:-85740560 Msa1132900:CDS
ATCACTTACTTGATCTTGAA+AGG 0.452689 7_3:+85739185 None:intergenic
TTTAGAAGAAAAGAAGAGAA+AGG 0.454059 7_3:-85740317 Msa1132900:CDS
TTGCTGGGGTGGGTGAAGGT+GGG 0.455177 7_3:-85740184 Msa1132900:CDS
TTCCACCGGCGTTAGCTCCA+TGG 0.457976 7_3:-85738145 Msa1132900:CDS
TGTGAGAAGTGGTGTTGCGG+TGG 0.462747 7_3:+85740589 None:intergenic
TCAGGCATTAATGCATGGCC+AGG 0.465216 7_3:-85739246 Msa1132900:intron
TTTCCTTTGTTGGGTTACCT+TGG 0.473219 7_3:-85738121 Msa1132900:CDS
TTAGAAGAAAAGAAGAGAAA+GGG 0.478877 7_3:-85740316 Msa1132900:CDS
TGCTCTGCAGTTCAAACAAA+GGG 0.480096 7_3:+85738084 None:intergenic
AGACAGAGGTGGTGTTTGCT+GGG 0.480683 7_3:-85740199 Msa1132900:CDS
GTTCTCCATTCTTCCATAGC+AGG 0.489761 7_3:+85737595 None:intergenic
GTCATCGGCGCCGGCGCCGG+AGG 0.490906 7_3:-85740551 Msa1132900:CDS
CACTCCGAACCAATTTGCCT+CGG 0.495195 7_3:-85740367 Msa1132900:CDS
CACTCGTCACGATAAGTCTC+AGG 0.501205 7_3:+85737532 None:intergenic
GTGGGCATGATGAATTTCAT+TGG 0.502202 7_3:+85740608 None:intergenic
GACTTCATTGTACATTGCAC+AGG 0.505864 7_3:-85738543 Msa1132900:CDS
TCATAATATGGGCACGGGCT+CGG 0.507929 7_3:-85737943 Msa1132900:CDS
TTTCCTTTCCTTGAAACCAA+TGG 0.508177 7_3:-85738218 Msa1132900:CDS
TCAGTGCGGTGTTCCTGCTA+TGG 0.508464 7_3:-85737608 Msa1132900:CDS
GCGTGCTGCTACTAAGCCTC+CGG 0.510739 7_3:+85740535 None:intergenic
ATATGGCTACATCTAAGAAC+AGG 0.511352 7_3:-85737564 Msa1132900:CDS
ACTTGATCTTGAAAGGGCTC+GGG 0.512775 7_3:+85739192 None:intergenic
AGAAGAATTGGGCGGTTCAT+GGG 0.513280 7_3:-85740468 Msa1132900:CDS
GTGAGAAGTGGTGTTGCGGT+GGG 0.518569 7_3:+85740590 None:intergenic
TCACTTACTTGATCTTGAAA+GGG 0.518929 7_3:+85739186 None:intergenic
TTGAGATTGGTGATTTGGTG+AGG 0.519792 7_3:-85740226 Msa1132900:CDS
TTCGAGCGAGGAGAAGAATT+GGG 0.519829 7_3:-85740479 Msa1132900:CDS
TCTCCCGAGGCAAATTGGTT+CGG 0.520142 7_3:+85740363 None:intergenic
AGCCACATGTTATCATGGCC+AGG 0.523909 7_3:+85738751 None:intergenic
CCCCGCCACGTGGCAGTCAT+CGG 0.524579 7_3:-85740566 Msa1132900:CDS
AATGAAGCCACATGTTATCA+TGG 0.526082 7_3:+85738746 None:intergenic
ACTCCGAACCAATTTGCCTC+GGG 0.526203 7_3:-85740366 Msa1132900:CDS
AAGAGGCACACTCATAATAT+GGG 0.527124 7_3:-85737954 Msa1132900:CDS
GGGAAAGGAGCAACCTTCCA+AGG 0.527136 7_3:+85738104 None:intergenic
TCATGTTCATTCATGTGATA+GGG 0.529036 7_3:+85740720 None:intergenic
ATCTACGGTCACCACACCAT+TGG 0.533574 7_3:+85738202 None:intergenic
TCTGTTGAAGAAGATAAGCT+TGG 0.538010 7_3:-85738781 Msa1132900:CDS
CATTGCCCTTCCTTCAGAAG+AGG 0.538791 7_3:-85738033 Msa1132900:CDS
GGAGATGACTAAAGATATTG+AGG 0.539150 7_3:-85738012 Msa1132900:CDS
TGTAGAAGGTTCCCGAGTCA+TGG 0.539602 7_3:-85740287 Msa1132900:CDS
ATTGACAGTGTTCATGAAGA+TGG 0.540078 7_3:-85738603 Msa1132900:CDS
ACACCATTGGTTTCAAGGAA+AGG 0.541856 7_3:+85738215 None:intergenic
GAGATCTAGATCGGTGGAGA+GGG 0.542522 7_3:-85740150 Msa1132900:CDS
AAGAATCTGGCATTCCTAAG+AGG 0.544319 7_3:-85737971 Msa1132900:CDS
TCATCTCCTCTTCTGAAGGA+AGG 0.544426 7_3:+85738027 None:intergenic
CATCTCCTCTTCTGAAGGAA+GGG 0.547731 7_3:+85738028 None:intergenic
GGGTGTGAGAAGTGGTGTTG+CGG 0.549595 7_3:+85740586 None:intergenic
CCAGGAATATTGGGAAGTCT+CGG 0.551573 7_3:+85740071 None:intergenic
TTAGTCATCTCCTCTTCTGA+AGG 0.554548 7_3:+85738023 None:intergenic
GGGTGAAGGTGGGAAATGGA+CGG 0.554732 7_3:-85740174 Msa1132900:CDS
ATCAAAACCTCTCCATGACT+CGG 0.555813 7_3:+85740275 None:intergenic
TGTTTGAACTGCAGAGCAAG+TGG 0.561360 7_3:-85738079 Msa1132900:CDS
GAATCGTAATCGTAAGCCAC+AGG 0.564603 7_3:+85740678 None:intergenic
GCACGCGAGCTCCGACGAGA+AGG 0.564731 7_3:-85740518 Msa1132900:CDS
AATATGAACTTCTTTAGCAA+CGG 0.565855 7_3:+85738813 None:intergenic
TGCAGTTCAAACAAAGGGAA+AGG 0.568166 7_3:+85738089 None:intergenic
GATGCTGTTGTTGTTTGCAA+TGG 0.576128 7_3:-85740107 Msa1132900:CDS
GTTAAGAATAACACTGAACT+AGG 0.576377 7_3:+85737400 None:intergenic
CGCCGATGACTGCCACGTGG+CGG 0.576460 7_3:+85740564 None:intergenic
GTGTTCCTGCTATGGAAGAA+TGG 0.577997 7_3:-85737600 Msa1132900:CDS
ATATAAAGGCACCTGAACAT+TGG 0.580551 7_3:+85737920 None:intergenic
GATAAGCTTGGAAAGTTACC+TGG 0.583301 7_3:-85738769 Msa1132900:CDS
TTGCTCTGCAGTTCAAACAA+AGG 0.584189 7_3:+85738083 None:intergenic
CACACTCATAATATGGGCAC+GGG 0.585534 7_3:-85737948 Msa1132900:CDS
ACCGTAGATGACAATCGTGT+TGG 0.587555 7_3:-85738188 Msa1132900:CDS
GACAGAGGTGGTGTTTGCTG+GGG 0.588809 7_3:-85740198 Msa1132900:CDS
CCGATGACTGCCACGTGGCG+GGG 0.590887 7_3:+85740566 None:intergenic
TCGAGAAATATCAACCGCAC+TGG 0.594589 7_3:+85738846 None:intergenic
TGAGATCTAGATCGGTGGAG+AGG 0.598722 7_3:-85740151 Msa1132900:CDS
TCCAACACGATTGTCATCTA+CGG 0.599218 7_3:+85738187 None:intergenic
CTACTTGATGTCCTTCTCGT+CGG 0.601788 7_3:+85740507 None:intergenic
TAGGTTGTAGTTCTAATAGG+TGG 0.603871 7_3:-85738874 Msa1132900:CDS
CGGGTCCAAACCGAGTGGGT+CGG 0.604890 7_3:+85740424 None:intergenic
TACTGTAATCATAATTCCTG+TGG 0.606303 7_3:-85740694 Msa1132900:five_prime_UTR
CGGCGCCGATGACTGCCACG+TGG 0.606541 7_3:+85740561 None:intergenic
AACCCAACAAAGGAAAGCCA+TGG 0.607422 7_3:+85738128 None:intergenic
GCACACTCATAATATGGGCA+CGG 0.608045 7_3:-85737949 Msa1132900:CDS
ACGTGGCGGGGTGTGAGAAG+TGG 0.608557 7_3:+85740578 None:intergenic
TCAAAACCTCTCCATGACTC+GGG 0.609566 7_3:+85740276 None:intergenic
GAGATAGAATCCGACCCACT+CGG 0.610030 7_3:-85740434 Msa1132900:CDS
GTGAATTGTATAGGCTCGAG+TGG 0.612633 7_3:+85740387 None:intergenic
AATTTGCCTCGGGAGAGTAT+GGG 0.615300 7_3:-85740356 Msa1132900:CDS
ATGGACGGTGAGATCTAGAT+CGG 0.619336 7_3:-85740159 Msa1132900:CDS
GACGGTGAGATCTAGATCGG+TGG 0.626733 7_3:-85740156 Msa1132900:CDS
GGTTCGGGTCCAAACCGAGT+GGG 0.626979 7_3:+85740420 None:intergenic
AGCCATGGAGCTAACGCCGG+TGG 0.629282 7_3:+85738143 None:intergenic
CAGGCATTAATGCATGGCCA+GGG 0.629289 7_3:-85739245 Msa1132900:CDS
ATCGGTGGAGAGGGAATGTG+TGG 0.636731 7_3:-85740141 Msa1132900:CDS
AAGGTTCCCGAGTCATGGAG+AGG 0.638374 7_3:-85740282 Msa1132900:CDS
GGTTGATATTTCTCGAGACG+TGG 0.639339 7_3:-85738839 Msa1132900:CDS
CTGAGACTTATCGTGACGAG+TGG 0.640097 7_3:-85737531 Msa1132900:CDS
TTTCCTTGAAACCAATGGTG+TGG 0.641481 7_3:-85738213 Msa1132900:CDS
CGGTTCGGGTCCAAACCGAG+TGG 0.649786 7_3:+85740419 None:intergenic
TTTGGTGAGGTTGAAGACAG+AGG 0.656329 7_3:-85740213 Msa1132900:CDS
GAGCGAGGAGAAGAATTGGG+CGG 0.661680 7_3:-85740476 Msa1132900:CDS
CAAGTAGTAGTCTTCGAGCG+AGG 0.661706 7_3:-85740491 Msa1132900:CDS
TGAGACTTATCGTGACGAGT+GGG 0.661820 7_3:-85737530 Msa1132900:CDS
TACCTGGCCATGATAACATG+TGG 0.663783 7_3:-85738753 Msa1132900:CDS
CGGAAACCCATACTCTCCCG+AGG 0.666291 7_3:+85740350 None:intergenic
CTTCCAAGGTAACCCAACAA+AGG 0.675077 7_3:+85738118 None:intergenic
GAAAGCCATGGAGCTAACGC+CGG 0.676417 7_3:+85738140 None:intergenic
TGTTCATGAAGATGGTACAG+TGG 0.683307 7_3:-85738595 Msa1132900:CDS
ACTTCATTGTACATTGCACA+GGG 0.687673 7_3:-85738542 Msa1132900:intron
ACTTCTCACACCCCGCCACG+TGG 0.689666 7_3:-85740576 Msa1132900:CDS
GGTGAGGTTGAAGACAGAGG+TGG 0.690231 7_3:-85740210 Msa1132900:CDS
AATAGGTGGTGCTGCCAGTG+CGG 0.737644 7_3:-85738860 Msa1132900:CDS
AACTGGATTGCTGATCAGTG+CGG 0.766461 7_3:-85737622 Msa1132900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTTTTTATTTTTTTCAAT+TGG - chr7_3:85738147-85738166 Msa1132900:CDS 10.0%
!!! TTTTTTTTTTAATGAATAAG+TGG + chr7_3:85738336-85738355 None:intergenic 10.0%
!! ATGAATAATCAAATAAAAAT+TGG + chr7_3:85738452-85738471 None:intergenic 10.0%
!! AAATAGCAATAAATAATTTA+AGG + chr7_3:85738573-85738592 None:intergenic 10.0%
!! TTTGATATAACAAAATATAA+AGG + chr7_3:85740135-85740154 None:intergenic 10.0%
!!! AATTATTTTAATGAGAAAGA+GGG + chr7_3:85737290-85737309 None:intergenic 15.0%
!!! AAATTATTTTAATGAGAAAG+AGG + chr7_3:85737291-85737310 None:intergenic 15.0%
!! ATTGTACTTATTATTGTTAT+AGG - chr7_3:85738661-85738680 Msa1132900:intron 15.0%
!! GTTTAAAAGAAAAACTAATA+GGG + chr7_3:85739535-85739554 None:intergenic 15.0%
!! GAATGTAAATTATATATGTT+TGG - chr7_3:85740691-85740710 Msa1132900:five_prime_UTR 15.0%
!! TTAATAAATGGAAGAATCAA+TGG + chr7_3:85737390-85737409 None:intergenic 20.0%
!!! ATTTTGGTGTTGTTAATAAA+TGG + chr7_3:85737402-85737421 None:intergenic 20.0%
!!! ATGTCTCTTTCTTATTTATA+TGG - chr7_3:85738003-85738022 Msa1132900:CDS 20.0%
!! ATTAGAAAACAGAATATAAG+AGG + chr7_3:85738075-85738094 None:intergenic 20.0%
!!! ATTTAGTTTAAAGACTAACA+AGG + chr7_3:85738183-85738202 None:intergenic 20.0%
!! CAAAATTCAACTTAACAATT+CGG - chr7_3:85738759-85738778 Msa1132900:CDS 20.0%
!! TAACTAAAAAAGAATCCTAA+TGG + chr7_3:85738904-85738923 None:intergenic 20.0%
!! GGTTTAAAAGAAAAACTAAT+AGG + chr7_3:85739536-85739555 None:intergenic 20.0%
!! AATAGTTAACTATCCTTTAA+TGG - chr7_3:85740347-85740366 Msa1132900:CDS 20.0%
!!! TCTCTTCTTTTCTTCTAAAA+GGG + chr7_3:85737720-85737739 None:intergenic 25.0%
!! TTCTCTTCTTTTCTTCTAAA+AGG + chr7_3:85737721-85737740 None:intergenic 25.0%
! TTTAGAAGAAAAGAAGAGAA+AGG - chr7_3:85737721-85737740 Msa1132900:intron 25.0%
! TTAGAAGAAAAGAAGAGAAA+GGG - chr7_3:85737722-85737741 Msa1132900:intron 25.0%
! AGAAAATAACCAGGAATATT+GGG + chr7_3:85737979-85737998 None:intergenic 25.0%
! AAGAAAATAACCAGGAATAT+TGG + chr7_3:85737980-85737999 None:intergenic 25.0%
! GAAATGAAATTGAAAAAGCT+TGG + chr7_3:85738098-85738117 None:intergenic 25.0%
!!! TTTTTTCAATTGGAATGACA+TGG - chr7_3:85738157-85738176 Msa1132900:CDS 25.0%
! GATATGTATTGTTATAAGCA+GGG - chr7_3:85738288-85738307 Msa1132900:intron 25.0%
! ATATGTATTGTTATAAGCAG+GGG - chr7_3:85738289-85738308 Msa1132900:intron 25.0%
!!! TTTTTTGTCAAGTAATCTGA+TGG + chr7_3:85738374-85738393 None:intergenic 25.0%
! TTACCTTTCAACAAAAATGT+TGG - chr7_3:85738418-85738437 Msa1132900:intron 25.0%
! ATATTGATACTAGTTCCATT+AGG - chr7_3:85738886-85738905 Msa1132900:intron 25.0%
! ACAAATTCAAATAGCTCATT+TGG - chr7_3:85738951-85738970 Msa1132900:intron 25.0%
!!! TTCTATCCATTTTTTGTGTT+GGG - chr7_3:85739141-85739160 Msa1132900:intron 25.0%
! AATATGAACTTCTTTAGCAA+CGG + chr7_3:85739228-85739247 None:intergenic 25.0%
!!! ATGGTAAAACTTGTTATCTA+TGG - chr7_3:85739317-85739336 Msa1132900:intron 25.0%
! ATTAGTAACCATAAACTGTT+TGG - chr7_3:85739364-85739383 Msa1132900:intron 25.0%
!! TTTTAAACCAGTTTATGTTG+TGG - chr7_3:85739547-85739566 Msa1132900:intron 25.0%
!!! TAAGTTTTAAATCGCAAATG+CGG - chr7_3:85739573-85739592 Msa1132900:intron 25.0%
! TTGAGGACTCAAATATATTT+AGG - chr7_3:85739692-85739711 Msa1132900:intron 25.0%
! TGTTTCTTCTTGTATTATAG+TGG - chr7_3:85740169-85740188 Msa1132900:CDS 25.0%
! ATTCTTAATTGTTCAGACTT+AGG - chr7_3:85740207-85740226 Msa1132900:CDS 25.0%
TCATGTTCATTCATGTGATA+GGG + chr7_3:85737321-85737340 None:intergenic 30.0%
ATCATGTTCATTCATGTGAT+AGG + chr7_3:85737322-85737341 None:intergenic 30.0%
TACTGTAATCATAATTCCTG+TGG - chr7_3:85737344-85737363 Msa1132900:three_prime_UTR 30.0%
! TTCTTCTAAAAGGGTAATCT+CGG + chr7_3:85737711-85737730 None:intergenic 30.0%
!! AGAGGTTTTGATGTATTTGA+AGG - chr7_3:85737774-85737793 Msa1132900:intron 30.0%
!!! TTTGCTGAAGATTTTGAGAT+TGG - chr7_3:85737799-85737818 Msa1132900:intron 30.0%
!!! AGATTTTGAGATTGGTGATT+TGG - chr7_3:85737807-85737826 Msa1132900:intron 30.0%
GGATATGTATTGTTATAAGC+AGG - chr7_3:85738287-85738306 Msa1132900:intron 30.0%
! TGACCAACATTTTTGTTGAA+AGG + chr7_3:85738424-85738443 None:intergenic 30.0%
TCACTTACTTGATCTTGAAA+GGG + chr7_3:85738855-85738874 None:intergenic 30.0%
ATCACTTACTTGATCTTGAA+AGG + chr7_3:85738856-85738875 None:intergenic 30.0%
TCAAGATCAAGTAAGTGATA+TGG - chr7_3:85738857-85738876 Msa1132900:CDS 30.0%
AGCATATGTAATATGTTCGA+TGG + chr7_3:85739083-85739102 None:intergenic 30.0%
!!! CTTCTATCCATTTTTTGTGT+TGG - chr7_3:85739140-85739159 Msa1132900:intron 30.0%
TATCTATGGTGAGAATTAGA+TGG - chr7_3:85739331-85739350 Msa1132900:intron 30.0%
TATGGTTACTAATGTCATGA+TGG + chr7_3:85739357-85739376 None:intergenic 30.0%
ACAGTTATCCAAACAGTTTA+TGG + chr7_3:85739375-85739394 None:intergenic 30.0%
!! CTGCAATATAAATGTTTTGG+AGG - chr7_3:85739596-85739615 Msa1132900:intron 30.0%
GTTGCTATAACATTGCAATT+TGG + chr7_3:85739643-85739662 None:intergenic 30.0%
! TGCAATTTAAAACCATGTTG+AGG - chr7_3:85739675-85739694 Msa1132900:intron 30.0%
ATATATTTGAGTCCTCAACA+TGG + chr7_3:85739690-85739709 None:intergenic 30.0%
ATCATACTTGTACCTAGAAA+AGG + chr7_3:85739800-85739819 None:intergenic 30.0%
!! TTGCATTTGACTTCATTTTG+TGG + chr7_3:85740243-85740262 None:intergenic 30.0%
TATACAGAGCTAAAATATCC+TGG - chr7_3:85740264-85740283 Msa1132900:CDS 30.0%
AGAACATGGTTAAAAAAACC+AGG + chr7_3:85740285-85740304 None:intergenic 30.0%
TAACCATGTTCTGTTTCAAA+AGG - chr7_3:85740293-85740312 Msa1132900:CDS 30.0%
AACATATCAGGTTCCATTAA+AGG + chr7_3:85740363-85740382 None:intergenic 30.0%
TAATGGAACCTGATATGTTA+AGG - chr7_3:85740364-85740383 Msa1132900:CDS 30.0%
TACACATTCCTTAACATATC+AGG + chr7_3:85740375-85740394 None:intergenic 30.0%
GTTAAGAATAACACTGAACT+AGG + chr7_3:85740641-85740660 None:intergenic 30.0%
! TTCATTGGCGTGAACAATTT+TGG + chr7_3:85737418-85737437 None:intergenic 35.0%
GACATGAGAAGAAAATAACC+AGG + chr7_3:85737988-85738007 None:intergenic 35.0%
ACTTTATGAATGTGCTAGAG+TGG + chr7_3:85738030-85738049 None:intergenic 35.0%
TAATGAATAAGTGGTGTGTC+CGG + chr7_3:85738327-85738346 None:intergenic 35.0%
! CAATTCGGATAACCTTTTTC+AGG - chr7_3:85738774-85738793 Msa1132900:CDS 35.0%
CATGCATTAATGCCTGAAAA+AGG + chr7_3:85738789-85738808 None:intergenic 35.0%
!!! CTTTTTCAGGCATTAATGCA+TGG - chr7_3:85738787-85738806 Msa1132900:CDS 35.0%
!!! ATCCATTTTTTGTGTTGGGT+AGG - chr7_3:85739145-85739164 Msa1132900:intron 35.0%
AACCTACCCAACACAAAAAA+TGG + chr7_3:85739150-85739169 None:intergenic 35.0%
!! TAGGTTGTAGTTCTAATAGG+TGG - chr7_3:85739164-85739183 Msa1132900:intron 35.0%
TCTGTTGAAGAAGATAAGCT+TGG - chr7_3:85739257-85739276 Msa1132900:intron 35.0%
AATGAAGCCACATGTTATCA+TGG + chr7_3:85739295-85739314 None:intergenic 35.0%
TAACATGTGGCTTCATTCTA+TGG - chr7_3:85739298-85739317 Msa1132900:intron 35.0%
ATTGACAGTGTTCATGAAGA+TGG - chr7_3:85739435-85739454 Msa1132900:intron 35.0%
ACTTCATTGTACATTGCACA+GGG - chr7_3:85739496-85739515 Msa1132900:intron 35.0%
CTTAAGTCCACAACATAAAC+TGG + chr7_3:85739557-85739576 None:intergenic 35.0%
! CGGCTGCAATATAAATGTTT+TGG - chr7_3:85739593-85739612 Msa1132900:intron 35.0%
CATTGCAATTTGGACATTGT+CGG + chr7_3:85739633-85739652 None:intergenic 35.0%
TTGCAATGTTATAGCAACGA+CGG - chr7_3:85739645-85739664 Msa1132900:intron 35.0%
AGACTTTATGTCTCAATTGC+AGG + chr7_3:85739727-85739746 None:intergenic 35.0%
! TGTCCATTTGTTCCTTTTCT+AGG - chr7_3:85739785-85739804 Msa1132900:intron 35.0%
GTACCTAGAAAAGGAACAAA+TGG + chr7_3:85739791-85739810 None:intergenic 35.0%
TTTCCTTTCCTTGAAACCAA+TGG - chr7_3:85739820-85739839 Msa1132900:intron 35.0%
GGAGATGACTAAAGATATTG+AGG - chr7_3:85740026-85740045 Msa1132900:intron 35.0%
! TACTTGTCACTTGAAGAATC+TGG - chr7_3:85740054-85740073 Msa1132900:intron 35.0%
ATATTATGAGTGTGCCTCTT+AGG + chr7_3:85740084-85740103 None:intergenic 35.0%
! TAAGAGGCACACTCATAATA+TGG - chr7_3:85740083-85740102 Msa1132900:CDS 35.0%
! AAGAGGCACACTCATAATAT+GGG - chr7_3:85740084-85740103 Msa1132900:CDS 35.0%
!! ATATAAAGGCACCTGAACAT+TGG + chr7_3:85740121-85740140 None:intergenic 35.0%
!!! ATGCCTTTTGAAACAGAACA+TGG + chr7_3:85740299-85740318 None:intergenic 35.0%
ATGGAGAACGCAAATGTATA+TGG - chr7_3:85740457-85740476 Msa1132900:CDS 35.0%
ATATGGCTACATCTAAGAAC+AGG - chr7_3:85740474-85740493 Msa1132900:CDS 35.0%
GTGGGCATGATGAATTTCAT+TGG + chr7_3:85737433-85737452 None:intergenic 40.0%
! TGGTTCGGAGTGAATTGTAT+AGG + chr7_3:85737663-85737682 None:intergenic 40.0%
AGAAAGGGAGAGATTGTAGA+AGG - chr7_3:85737737-85737756 Msa1132900:intron 40.0%
ATCAAAACCTCTCCATGACT+CGG + chr7_3:85737766-85737785 None:intergenic 40.0%
!! TTGAGATTGGTGATTTGGTG+AGG - chr7_3:85737812-85737831 Msa1132900:intron 40.0%
!! GATGCTGTTGTTGTTTGCAA+TGG - chr7_3:85737931-85737950 Msa1132900:intron 40.0%
TGTATTGTTATAAGCAGGGG+CGG - chr7_3:85738292-85738311 Msa1132900:intron 40.0%
AATGAATAAGTGGTGTGTCC+GGG + chr7_3:85738326-85738345 None:intergenic 40.0%
TACTTGATCTTGAAAGGGCT+CGG + chr7_3:85738850-85738869 None:intergenic 40.0%
!!! TAGCTCATTTGGTTTTGCGT+TGG - chr7_3:85738962-85738981 Msa1132900:intron 40.0%
!! GGGTAGGTTGTAGTTCTAAT+AGG - chr7_3:85739161-85739180 Msa1132900:intron 40.0%
GATAAGCTTGGAAAGTTACC+TGG - chr7_3:85739269-85739288 Msa1132900:intron 40.0%
TGTTCATGAAGATGGTACAG+TGG - chr7_3:85739443-85739462 Msa1132900:intron 40.0%
! GGTACAGTGGTTTTCAAAGA+TGG - chr7_3:85739456-85739475 Msa1132900:intron 40.0%
GACTTCATTGTACATTGCAC+AGG - chr7_3:85739495-85739514 Msa1132900:intron 40.0%
TTGGACATTGTCGGTAAATG+TGG + chr7_3:85739624-85739643 None:intergenic 40.0%
TGCAATGTTATAGCAACGAC+GGG - chr7_3:85739646-85739665 Msa1132900:intron 40.0%
!! ACACCATTGGTTTCAAGGAA+AGG + chr7_3:85739826-85739845 None:intergenic 40.0%
TTTCCTTGAAACCAATGGTG+TGG - chr7_3:85739825-85739844 Msa1132900:intron 40.0%
TCCAACACGATTGTCATCTA+CGG + chr7_3:85739854-85739873 None:intergenic 40.0%
GGAAAAACATGCTTGTAGAG+CGG + chr7_3:85739877-85739896 None:intergenic 40.0%
! CTACAAGCATGTTTTTCCAC+CGG - chr7_3:85739879-85739898 Msa1132900:intron 40.0%
TTTCCTTTGTTGGGTTACCT+TGG - chr7_3:85739917-85739936 Msa1132900:intron 40.0%
TGCAGTTCAAACAAAGGGAA+AGG + chr7_3:85739952-85739971 None:intergenic 40.0%
TGCTCTGCAGTTCAAACAAA+GGG + chr7_3:85739957-85739976 None:intergenic 40.0%
TTGCTCTGCAGTTCAAACAA+AGG + chr7_3:85739958-85739977 None:intergenic 40.0%
TTAGTCATCTCCTCTTCTGA+AGG + chr7_3:85740018-85740037 None:intergenic 40.0%
AAGAATCTGGCATTCCTAAG+AGG - chr7_3:85740067-85740086 Msa1132900:intron 40.0%
AGGAATGTGTATTCTTGCAG+TGG - chr7_3:85740384-85740403 Msa1132900:CDS 40.0%
GGAATGTGTATTCTTGCAGT+GGG - chr7_3:85740385-85740404 Msa1132900:CDS 40.0%
GAATCGTAATCGTAAGCCAC+AGG + chr7_3:85737363-85737382 None:intergenic 45.0%
CTACTTGATGTCCTTCTCGT+CGG + chr7_3:85737534-85737553 None:intergenic 45.0%
TTCGAGCGAGGAGAAGAATT+GGG - chr7_3:85737559-85737578 Msa1132900:CDS 45.0%
AGAAGAATTGGGCGGTTCAT+GGG - chr7_3:85737570-85737589 Msa1132900:CDS 45.0%
GTGAATTGTATAGGCTCGAG+TGG + chr7_3:85737654-85737673 None:intergenic 45.0%
! AATTTGCCTCGGGAGAGTAT+GGG - chr7_3:85737682-85737701 Msa1132900:intron 45.0%
TCAAAACCTCTCCATGACTC+GGG + chr7_3:85737765-85737784 None:intergenic 45.0%
TTTGGTGAGGTTGAAGACAG+AGG - chr7_3:85737825-85737844 Msa1132900:intron 45.0%
ATGGACGGTGAGATCTAGAT+CGG - chr7_3:85737879-85737898 Msa1132900:intron 45.0%
CCAGGAATATTGGGAAGTCT+CGG + chr7_3:85737970-85737989 None:intergenic 45.0%
GTATTGTTATAAGCAGGGGC+GGG - chr7_3:85738293-85738312 Msa1132900:intron 45.0%
TATTGTTATAAGCAGGGGCG+GGG - chr7_3:85738294-85738313 Msa1132900:intron 45.0%
GCTCGGGTGTTCTGTAATTA+TGG + chr7_3:85738833-85738852 None:intergenic 45.0%
ACTTGATCTTGAAAGGGCTC+GGG + chr7_3:85738849-85738868 None:intergenic 45.0%
ATGGTGCGTTACATTGGACA+CGG + chr7_3:85739064-85739083 None:intergenic 45.0%
TGTTCGATGGTGCGTTACAT+TGG + chr7_3:85739070-85739089 None:intergenic 45.0%
TCGAGAAATATCAACCGCAC+TGG + chr7_3:85739195-85739214 None:intergenic 45.0%
! GGTTGATATTTCTCGAGACG+TGG - chr7_3:85739199-85739218 Msa1132900:CDS 45.0%
TACCTGGCCATGATAACATG+TGG - chr7_3:85739285-85739304 Msa1132900:intron 45.0%
!! TCACCACACCATTGGTTTCA+AGG + chr7_3:85739831-85739850 None:intergenic 45.0%
ACCGTAGATGACAATCGTGT+TGG - chr7_3:85739850-85739869 Msa1132900:intron 45.0%
CTCCATGGCTTTCCTTTGTT+GGG - chr7_3:85739908-85739927 Msa1132900:intron 45.0%
AACCCAACAAAGGAAAGCCA+TGG + chr7_3:85739913-85739932 None:intergenic 45.0%
CTTCCAAGGTAACCCAACAA+AGG + chr7_3:85739923-85739942 None:intergenic 45.0%
CTTTGTTGGGTTACCTTGGA+AGG - chr7_3:85739921-85739940 Msa1132900:intron 45.0%
TGTTTGAACTGCAGAGCAAG+TGG - chr7_3:85739959-85739978 Msa1132900:intron 45.0%
! CATCTCCTCTTCTGAAGGAA+GGG + chr7_3:85740013-85740032 None:intergenic 45.0%
! TCATCTCCTCTTCTGAAGGA+AGG + chr7_3:85740014-85740033 None:intergenic 45.0%
GCACACTCATAATATGGGCA+CGG - chr7_3:85740089-85740108 Msa1132900:CDS 45.0%
CACACTCATAATATGGGCAC+GGG - chr7_3:85740090-85740109 Msa1132900:CDS 45.0%
TGCAGTGGGACTACAATAAC+TGG - chr7_3:85740399-85740418 Msa1132900:CDS 45.0%
AACTGGATTGCTGATCAGTG+CGG - chr7_3:85740416-85740435 Msa1132900:CDS 45.0%
GTGTTCCTGCTATGGAAGAA+TGG - chr7_3:85740438-85740457 Msa1132900:CDS 45.0%
GTTCTCCATTCTTCCATAGC+AGG + chr7_3:85740446-85740465 None:intergenic 45.0%
TGAGACTTATCGTGACGAGT+GGG - chr7_3:85740508-85740527 Msa1132900:CDS 45.0%
!! AAAAAAAGTAATAAAAAATA+GGG + chr7_3:85737263-85737282 None:intergenic 5.0%
!! TAAAAAAAGTAATAAAAAAT+AGG + chr7_3:85737264-85737283 None:intergenic 5.0%
!!! AGAAATAATTTTTTTAAAAA+AGG - chr7_3:85738709-85738728 Msa1132900:intron 5.0%
!!! TTATATCAAATTTTTTTATT+AGG - chr7_3:85740145-85740164 Msa1132900:CDS 5.0%
CAAGTAGTAGTCTTCGAGCG+AGG - chr7_3:85737547-85737566 Msa1132900:CDS 50.0%
CTTCGAGCGAGGAGAAGAAT+TGG - chr7_3:85737558-85737577 Msa1132900:CDS 50.0%
GAGAAGAATTGGGCGGTTCA+TGG - chr7_3:85737569-85737588 Msa1132900:CDS 50.0%
AGTGGGTCGGATTCTATCTC+TGG + chr7_3:85737604-85737623 None:intergenic 50.0%
GAGATAGAATCCGACCCACT+CGG - chr7_3:85737604-85737623 Msa1132900:CDS 50.0%
AGTGGATAAGCTTCCGGTTC+GGG + chr7_3:85737636-85737655 None:intergenic 50.0%
GAGTGGATAAGCTTCCGGTT+CGG + chr7_3:85737637-85737656 None:intergenic 50.0%
CACTCCGAACCAATTTGCCT+CGG - chr7_3:85737671-85737690 Msa1132900:intron 50.0%
ACTCCGAACCAATTTGCCTC+GGG - chr7_3:85737672-85737691 Msa1132900:intron 50.0%
TCTCCCGAGGCAAATTGGTT+CGG + chr7_3:85737678-85737697 None:intergenic 50.0%
CATACTCTCCCGAGGCAAAT+TGG + chr7_3:85737683-85737702 None:intergenic 50.0%
CAATTTGCCTCGGGAGAGTA+TGG - chr7_3:85737681-85737700 Msa1132900:intron 50.0%
TGTAGAAGGTTCCCGAGTCA+TGG - chr7_3:85737751-85737770 Msa1132900:intron 50.0%
AAGACAGAGGTGGTGTTTGC+TGG - chr7_3:85737838-85737857 Msa1132900:intron 50.0%
AGACAGAGGTGGTGTTTGCT+GGG - chr7_3:85737839-85737858 Msa1132900:intron 50.0%
TGAGATCTAGATCGGTGGAG+AGG - chr7_3:85737887-85737906 Msa1132900:intron 50.0%
GAGATCTAGATCGGTGGAGA+GGG - chr7_3:85737888-85737907 Msa1132900:intron 50.0%
CCGAGACTTCCCAATATTCC+TGG - chr7_3:85737967-85737986 Msa1132900:CDS 50.0%
TCCCATGAGCATAGCTCAGT+TGG - chr7_3:85738261-85738280 Msa1132900:intron 50.0%
GCCAACTGAGCTATGCTCAT+GGG + chr7_3:85738265-85738284 None:intergenic 50.0%
AGCCAACTGAGCTATGCTCA+TGG + chr7_3:85738266-85738285 None:intergenic 50.0%
ATGAGCATAGCTCAGTTGGC+TGG - chr7_3:85738265-85738284 Msa1132900:intron 50.0%
TGAGCATAGCTCAGTTGGCT+GGG - chr7_3:85738266-85738285 Msa1132900:intron 50.0%
TCAGGCATTAATGCATGGCC+AGG - chr7_3:85738792-85738811 Msa1132900:CDS 50.0%
CAGGCATTAATGCATGGCCA+GGG - chr7_3:85738793-85738812 Msa1132900:CDS 50.0%
TGGCTATGCATTTGCTTCCC+TGG + chr7_3:85738813-85738832 None:intergenic 50.0%
ATTGGACACGGACGTCACTT+TGG + chr7_3:85739052-85739071 None:intergenic 50.0%
AGCCACATGTTATCATGGCC+AGG + chr7_3:85739290-85739309 None:intergenic 50.0%
ATCTACGGTCACCACACCAT+TGG + chr7_3:85739839-85739858 None:intergenic 50.0%
GCTCCATGGCTTTCCTTTGT+TGG - chr7_3:85739907-85739926 Msa1132900:intron 50.0%
CATTGCCCTTCCTTCAGAAG+AGG - chr7_3:85740005-85740024 Msa1132900:intron 50.0%
TCATAATATGGGCACGGGCT+CGG - chr7_3:85740095-85740114 Msa1132900:CDS 50.0%
CACTCGTCACGATAAGTCTC+AGG + chr7_3:85740509-85740528 None:intergenic 50.0%
CTGAGACTTATCGTGACGAG+TGG - chr7_3:85740507-85740526 Msa1132900:CDS 50.0%
!! GTGAGAAGTGGTGTTGCGGT+GGG + chr7_3:85737451-85737470 None:intergenic 55.0%
!! TGTGAGAAGTGGTGTTGCGG+TGG + chr7_3:85737452-85737471 None:intergenic 55.0%
! GGGTGTGAGAAGTGGTGTTG+CGG + chr7_3:85737455-85737474 None:intergenic 55.0%
GAGCGAGGAGAAGAATTGGG+CGG - chr7_3:85737562-85737581 Msa1132900:CDS 55.0%
AGAATCCGACCCACTCGGTT+TGG - chr7_3:85737609-85737628 Msa1132900:CDS 55.0%
GGCTCGAGTGGATAAGCTTC+CGG + chr7_3:85737642-85737661 None:intergenic 55.0%
AAGGTTCCCGAGTCATGGAG+AGG - chr7_3:85737756-85737775 Msa1132900:intron 55.0%
GGTGAGGTTGAAGACAGAGG+TGG - chr7_3:85737828-85737847 Msa1132900:intron 55.0%
! GACAGAGGTGGTGTTTGCTG+GGG - chr7_3:85737840-85737859 Msa1132900:intron 55.0%
GGGTGAAGGTGGGAAATGGA+CGG - chr7_3:85737864-85737883 Msa1132900:intron 55.0%
GACGGTGAGATCTAGATCGG+TGG - chr7_3:85737882-85737901 Msa1132900:intron 55.0%
ATCGGTGGAGAGGGAATGTG+TGG - chr7_3:85737897-85737916 Msa1132900:intron 55.0%
!! AATAGGTGGTGCTGCCAGTG+CGG - chr7_3:85739178-85739197 Msa1132900:intron 55.0%
GAAAGCCATGGAGCTAACGC+CGG + chr7_3:85739901-85739920 None:intergenic 55.0%
GGGAAAGGAGCAACCTTCCA+AGG + chr7_3:85739937-85739956 None:intergenic 55.0%
CTGCAGAGCAAGTGGATAGC+TGG - chr7_3:85739967-85739986 Msa1132900:intron 55.0%
TCAGTGCGGTGTTCCTGCTA+TGG - chr7_3:85740430-85740449 Msa1132900:CDS 55.0%
! GCGTGCTGCTACTAAGCCTC+CGG + chr7_3:85737506-85737525 None:intergenic 60.0%
GGTTCGGGTCCAAACCGAGT+GGG + chr7_3:85737621-85737640 None:intergenic 60.0%
!! CACTCGGTTTGGACCCGAAC+CGG - chr7_3:85737620-85737639 Msa1132900:CDS 60.0%
CGGAAACCCATACTCTCCCG+AGG + chr7_3:85737691-85737710 None:intergenic 60.0%
! AGAGGTGGTGTTTGCTGGGG+TGG - chr7_3:85737843-85737862 Msa1132900:intron 60.0%
! GAGGTGGTGTTTGCTGGGGT+GGG - chr7_3:85737844-85737863 Msa1132900:intron 60.0%
! GTGTTTGCTGGGGTGGGTGA+AGG - chr7_3:85737850-85737869 Msa1132900:intron 60.0%
TTTGCTGGGGTGGGTGAAGG+TGG - chr7_3:85737853-85737872 Msa1132900:intron 60.0%
TTGCTGGGGTGGGTGAAGGT+GGG - chr7_3:85737854-85737873 Msa1132900:intron 60.0%
GGGTGGGTGAAGGTGGGAAA+TGG - chr7_3:85737860-85737879 Msa1132900:intron 60.0%
TTCCACCGGCGTTAGCTCCA+TGG - chr7_3:85739893-85739912 Msa1132900:intron 60.0%
! ACGTGGCGGGGTGTGAGAAG+TGG + chr7_3:85737463-85737482 None:intergenic 65.0%
ACTTCTCACACCCCGCCACG+TGG - chr7_3:85737462-85737481 Msa1132900:exon 65.0%
TGCTACTAAGCCTCCGGCGC+CGG + chr7_3:85737500-85737519 None:intergenic 65.0%
CGGGTCCAAACCGAGTGGGT+CGG + chr7_3:85737617-85737636 None:intergenic 65.0%
! CGGTTCGGGTCCAAACCGAG+TGG + chr7_3:85737622-85737641 None:intergenic 65.0%
AGCCATGGAGCTAACGCCGG+TGG + chr7_3:85739898-85739917 None:intergenic 65.0%
CACGGGCTCGGCCAATGTTC+AGG - chr7_3:85740107-85740126 Msa1132900:CDS 65.0%
CCGATGACTGCCACGTGGCG+GGG + chr7_3:85737475-85737494 None:intergenic 70.0%
CCCCGCCACGTGGCAGTCAT+CGG - chr7_3:85737472-85737491 Msa1132900:exon 70.0%
GCCGATGACTGCCACGTGGC+GGG + chr7_3:85737476-85737495 None:intergenic 70.0%
CGCCGATGACTGCCACGTGG+CGG + chr7_3:85737477-85737496 None:intergenic 70.0%
CACGTGGCAGTCATCGGCGC+CGG - chr7_3:85737478-85737497 Msa1132900:CDS 70.0%
GCACGCGAGCTCCGACGAGA+AGG - chr7_3:85737520-85737539 Msa1132900:CDS 70.0%
!! CGGCGCCGATGACTGCCACG+TGG + chr7_3:85737480-85737499 None:intergenic 75.0%
GCAGGGGCGGGGTCTGAACC+CGG - chr7_3:85738305-85738324 Msa1132900:intron 75.0%
!!! GCAGTCATCGGCGCCGGCGC+CGG - chr7_3:85737484-85737503 Msa1132900:CDS 80.0%
!!! GTCATCGGCGCCGGCGCCGG+AGG - chr7_3:85737487-85737506 Msa1132900:CDS 85.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 85737258 85740802 85737258 ID=Msa1132900;Name=Msa1132900
chr7_3 mRNA 85737258 85740802 85737258 ID=Msa1132900-mRNA-1;Parent=Msa1132900;Name=Msa1132900-mRNA-1;_AED=0.04;_eAED=0.04;_QI=175|1|1|1|1|1|6|216|455
chr7_3 exon 85737258 85737656 85737258 ID=Msa1132900-mRNA-1:exon:25757;Parent=Msa1132900-mRNA-1
chr7_3 exon 85737932 85738253 85737932 ID=Msa1132900-mRNA-1:exon:25756;Parent=Msa1132900-mRNA-1
chr7_3 exon 85738543 85738625 85738543 ID=Msa1132900-mRNA-1:exon:25755;Parent=Msa1132900-mRNA-1
chr7_3 exon 85738741 85738893 85738741 ID=Msa1132900-mRNA-1:exon:25754;Parent=Msa1132900-mRNA-1
chr7_3 exon 85739194 85739264 85739194 ID=Msa1132900-mRNA-1:exon:25753;Parent=Msa1132900-mRNA-1
chr7_3 exon 85740072 85740802 85740072 ID=Msa1132900-mRNA-1:exon:25752;Parent=Msa1132900-mRNA-1
chr7_3 five_prime_UTR 85740628 85740802 85740628 ID=Msa1132900-mRNA-1:five_prime_utr;Parent=Msa1132900-mRNA-1
chr7_3 CDS 85740072 85740627 85740072 ID=Msa1132900-mRNA-1:cds;Parent=Msa1132900-mRNA-1
chr7_3 CDS 85739194 85739264 85739194 ID=Msa1132900-mRNA-1:cds;Parent=Msa1132900-mRNA-1
chr7_3 CDS 85738741 85738893 85738741 ID=Msa1132900-mRNA-1:cds;Parent=Msa1132900-mRNA-1
chr7_3 CDS 85738543 85738625 85738543 ID=Msa1132900-mRNA-1:cds;Parent=Msa1132900-mRNA-1
chr7_3 CDS 85737932 85738253 85737932 ID=Msa1132900-mRNA-1:cds;Parent=Msa1132900-mRNA-1
chr7_3 CDS 85737474 85737656 85737474 ID=Msa1132900-mRNA-1:cds;Parent=Msa1132900-mRNA-1
chr7_3 three_prime_UTR 85737258 85737473 85737258 ID=Msa1132900-mRNA-1:three_prime_utr;Parent=Msa1132900-mRNA-1
Gene Sequence

>Msa1132900

ATGAAATTCATCATGCCCACCGCAACACCACTTCTCACACCCCGCCACGTGGCAGTCATCGGCGCCGGCGCCGGAGGCTTAGTAGCAGCACGCGAGCTCCGACGAGAAGGACATCAAGTAGTAGTCTTCGAGCGAGGAGAAGAATTGGGCGGTTCATGGGTCTATACTCCAGAGATAGAATCCGACCCACTCGGTTTGGACCCGAACCGGAAGCTTATCCACTCGAGCCTATACAATTCACTCCGAACCAATTTGCCTCGGGAGAGTATGGGTTTCCGAGATTACCCTTTTAGAAGAAAAGAAGAGAAAGGGAGAGATTGTAGAAGGTTCCCGAGTCATGGAGAGGTTTTGATGTATTTGAAGGATTTTGCTGAAGATTTTGAGATTGGTGATTTGGTGAGGTTGAAGACAGAGGTGGTGTTTGCTGGGGTGGGTGAAGGTGGGAAATGGACGGTGAGATCTAGATCGGTGGAGAGGGAATGTGTGGATGAGATTTACGATGCTGTTGTTGTTTGCAATGGACATTATTTTCAACCGAGACTTCCCAATATTCCTGGCATTAATGCATGGCCAGGGAAGCAAATGCATAGCCATAATTACAGAACACCCGAGCCCTTTCAAGATCAAGTTGTAGTTCTAATAGGTGGTGCTGCCAGTGCGGTTGATATTTCTCGAGACGTGGCAACCGTTGCTAAAGAAGTTCATATTGCAGCTAGATCTGTTGAAGAAGATAAGCTTGGAAAGTTACCTGGCCATGATAACATGTGGCTTCATTCTATGATTGACAGTGTTCATGAAGATGGTACAGTGGTTTTCAAAGATGGAAATGCAGTTATTGCTGACTTCATTGTACATTGCACAGGGTACAAGTATGATTTTCCTTTCCTTGAAACCAATGGTGTGGTGACCGTAGATGACAATCGTGTTGGACCGCTCTACAAGCATGTTTTTCCACCGGCGTTAGCTCCATGGCTTTCCTTTGTTGGGTTACCTTGGAAGGTTGCTCCTTTCCCTTTGTTTGAACTGCAGAGCAAGTGGATAGCTGGAGTTTTGTCTAATCGCATTGCCCTTCCTTCAGAAGAGGAGATGACTAAAGATATTGAGGCTTTTTACTTGTCACTTGAAGAATCTGGCATTCCTAAGAGGCACACTCATAATATGGGCACGGGCTCGGCCAATGTTCAGTGGGACTACAATAACTGGATTGCTGATCAGTGCGGTGTTCCTGCTATGGAAGAATGGAGAACGCAAATGTATATGGCTACATCTAAGAACAGGCTCTTGCGACCTGAGACTTATCGTGACGAGTGGGATGATGATGACATTGTTCAACAAGCTGAGCATGAATTTGCTAATTATCAGATATAA

Protein sequence

>Msa1132900

MKFIMPTATPLLTPRHVAVIGAGAGGLVAARELRREGHQVVVFERGEELGGSWVYTPEIESDPLGLDPNRKLIHSSLYNSLRTNLPRESMGFRDYPFRRKEEKGRDCRRFPSHGEVLMYLKDFAEDFEIGDLVRLKTEVVFAGVGEGGKWTVRSRSVERECVDEIYDAVVVCNGHYFQPRLPNIPGINAWPGKQMHSHNYRTPEPFQDQVVVLIGGAASAVDISRDVATVAKEVHIAARSVEEDKLGKLPGHDNMWLHSMIDSVHEDGTVVFKDGNAVIADFIVHCTGYKYDFPFLETNGVVTVDDNRVGPLYKHVFPPALAPWLSFVGLPWKVAPFPLFELQSKWIAGVLSNRIALPSEEEMTKDIEAFYLSLEESGIPKRHTHNMGTGSANVQWDYNNWIADQCGVPAMEEWRTQMYMATSKNRLLRPETYRDEWDDDDIVQQAEHEFANYQI*