Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0381470 | XP_013461828.1 | 93.596 | 406 | 7 | 1 | 1 | 406 | 1 | 387 | 0.0 | 773 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0381470 | sp|Q9M439|BCAT2_ARATH | 63.591 | 401 | 123 | 3 | 10 | 406 | 7 | 388 | 0.0 | 517 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0381470 | A0A072V3G0 | 93.596 | 406 | 7 | 1 | 1 | 406 | 1 | 387 | 0.0 | 773 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0037280 | Msa0381470 | 0.801596 | 8.358826e-49 | -8.615850e-47 |
Msa0037720 | Msa0381470 | 0.840768 | 7.128319e-58 | -8.615850e-47 |
Msa0039890 | Msa0381470 | 0.800356 | 1.497374e-48 | -8.615850e-47 |
Msa0052780 | Msa0381470 | 0.809721 | 1.645254e-50 | -8.615850e-47 |
Msa0083240 | Msa0381470 | 0.852996 | 3.198229e-61 | -8.615850e-47 |
Msa0087550 | Msa0381470 | 0.820965 | 5.188822e-53 | -8.615850e-47 |
Msa0093740 | Msa0381470 | 0.849468 | 3.171761e-60 | -8.615850e-47 |
Msa0097570 | Msa0381470 | 0.801580 | 8.421734e-49 | -8.615850e-47 |
Msa0118620 | Msa0381470 | 0.802915 | 4.472056e-49 | -8.615850e-47 |
Msa0129640 | Msa0381470 | 0.853263 | 2.681711e-61 | -8.615850e-47 |
Msa0134270 | Msa0381470 | 0.812651 | 3.807651e-51 | -8.615850e-47 |
Msa0180820 | Msa0381470 | 0.810968 | 8.853370e-51 | -8.615850e-47 |
Msa0196280 | Msa0381470 | 0.806682 | 7.304613e-50 | -8.615850e-47 |
Msa0224210 | Msa0381470 | 0.825300 | 5.053212e-54 | -8.615850e-47 |
Msa0238140 | Msa0381470 | 0.823969 | 1.040023e-53 | -8.615850e-47 |
Msa0374290 | Msa0381470 | 0.800635 | 1.313790e-48 | -8.615850e-47 |
Msa0381470 | Msa0387300 | 0.812320 | 4.499404e-51 | -8.615850e-47 |
Msa0381470 | Msa0390790 | 0.825294 | 5.070593e-54 | -8.615850e-47 |
Msa0381470 | Msa0413130 | 0.844275 | 8.361007e-59 | -8.615850e-47 |
Msa0381470 | Msa0434140 | 0.837763 | 4.291166e-57 | -8.615850e-47 |
Msa0381470 | Msa0455830 | 0.816973 | 4.195555e-52 | -8.615850e-47 |
Msa0381470 | Msa0458220 | 0.853635 | 2.097187e-61 | -8.615850e-47 |
Msa0381470 | Msa0470920 | 0.837182 | 6.046166e-57 | -8.615850e-47 |
Msa0381470 | Msa0476070 | 0.910656 | 1.467289e-82 | -8.615850e-47 |
Msa0381470 | Msa0477660 | 0.828526 | 8.562632e-55 | -8.615850e-47 |
Msa0381470 | Msa0480770 | 0.826279 | 2.959359e-54 | -8.615850e-47 |
Msa0381470 | Msa0481100 | 0.841834 | 3.735714e-58 | -8.615850e-47 |
Msa0381470 | Msa0489070 | 0.802799 | 4.725378e-49 | -8.615850e-47 |
Msa0381470 | Msa0504700 | 0.855964 | 4.429318e-62 | -8.615850e-47 |
Msa0381470 | Msa0508160 | 0.802806 | 4.710688e-49 | -8.615850e-47 |
Msa0381470 | Msa0519910 | 0.983474 | 7.657823e-158 | -8.615850e-47 |
Msa0381470 | Msa0521720 | 0.829771 | 4.271551e-55 | -8.615850e-47 |
Msa0381470 | Msa0560280 | 0.811270 | 7.612599e-51 | -8.615850e-47 |
Msa0381470 | Msa0609420 | 0.842270 | 2.865830e-58 | -8.615850e-47 |
Msa0381470 | Msa0614290 | 0.809574 | 1.769443e-50 | -8.615850e-47 |
Msa0381470 | Msa0617040 | 0.826200 | 3.091410e-54 | -8.615850e-47 |
Msa0381470 | Msa0636740 | 0.813323 | 2.712437e-51 | -8.615850e-47 |
Msa0381470 | Msa0636770 | 0.821524 | 3.857629e-53 | -8.615850e-47 |
Msa0381470 | Msa0638810 | 0.800718 | 1.263842e-48 | -8.615850e-47 |
Msa0381470 | Msa0638820 | 0.806424 | 8.280617e-50 | -8.615850e-47 |
Msa0381470 | Msa0645450 | 0.813859 | 2.067476e-51 | -8.615850e-47 |
Msa0381470 | Msa0650060 | 0.864068 | 1.585740e-64 | -8.615850e-47 |
Msa0381470 | Msa0652700 | 0.834375 | 3.108660e-56 | -8.615850e-47 |
Msa0381470 | Msa0656100 | 0.827266 | 1.719980e-54 | -8.615850e-47 |
Msa0381470 | Msa0697510 | 0.825444 | 4.670973e-54 | -8.615850e-47 |
Msa0381470 | Msa0697520 | 0.811956 | 5.401315e-51 | -8.615850e-47 |
Msa0381470 | Msa0708600 | 0.807290 | 5.434548e-50 | -8.615850e-47 |
Msa0381470 | Msa0749500 | 0.802348 | 5.854276e-49 | -8.615850e-47 |
Msa0381470 | Msa0749510 | 0.807847 | 4.138185e-50 | -8.615850e-47 |
Msa0381470 | Msa0793910 | 0.807304 | 5.397131e-50 | -8.615850e-47 |
Msa0381470 | Msa0831430 | 0.806639 | 7.461201e-50 | -8.615850e-47 |
Msa0381470 | Msa0876790 | 0.807328 | 5.334438e-50 | -8.615850e-47 |
Msa0381470 | Msa0945230 | 0.821197 | 4.588592e-53 | -8.615850e-47 |
Msa0381470 | Msa0979050 | 0.809468 | 1.864574e-50 | -8.615850e-47 |
Msa0381470 | Msa1028660 | 0.824102 | 9.681148e-54 | -8.615850e-47 |
Msa0381470 | Msa1039650 | 0.809316 | 2.009253e-50 | -8.615850e-47 |
Msa0381470 | Msa1120560 | 0.808104 | 3.648501e-50 | -8.615850e-47 |
Msa0381470 | Msa1128720 | 0.809153 | 2.178111e-50 | -8.615850e-47 |
Msa0381470 | Msa1157200 | 0.833657 | 4.703244e-56 | -8.615850e-47 |
Msa0381470 | Msa1164230 | 0.805181 | 1.511119e-49 | -8.615850e-47 |
Msa0381470 | Msa1171510 | 0.842471 | 2.533699e-58 | -8.615850e-47 |
Msa0381470 | Msa1173150 | 0.801243 | 9.869439e-49 | -8.615850e-47 |
Msa0381470 | Msa1217260 | 0.814794 | 1.284762e-51 | -8.615850e-47 |
Msa0381470 | Msa1217950 | 0.841692 | 4.071791e-58 | -8.615850e-47 |
Msa0381470 | Msa1219790 | 0.857838 | 1.242504e-62 | -8.615850e-47 |
Msa0381470 | Msa1267080 | 0.866708 | 2.339655e-65 | -8.615850e-47 |
Msa0381470 | Msa1302340 | 0.816379 | 5.700679e-52 | -8.615850e-47 |
Msa0381470 | Msa1339870 | 0.801265 | 9.771087e-49 | -8.615850e-47 |
Msa0381470 | Msa1345390 | 0.809825 | 1.562370e-50 | -8.615850e-47 |
Msa0381470 | Msa1401550 | 0.890187 | 1.235360e-73 | -8.615850e-47 |
Msa0381470 | Msa1412410 | 0.848607 | 5.502842e-60 | -8.615850e-47 |
Msa0381470 | Msa1427860 | 0.853437 | 2.390634e-61 | -8.615850e-47 |
Msa0381470 | Msa1462640 | 0.907575 | 4.370470e-81 | -8.615850e-47 |
Msa0267230 | Msa0381470 | 0.810909 | 9.119524e-51 | -8.615850e-47 |
Msa0268070 | Msa0381470 | 0.860280 | 2.306244e-63 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0381470 | MtrunA17_Chr3g0135321 | 93.596 | 406 | 7 | 1 | 1 | 406 | 1 | 387 | 0.0 | 773 |
Msa0381470 | MtrunA17_Chr5g0400811 | 62.674 | 359 | 115 | 1 | 47 | 405 | 68 | 407 | 3.69e-163 | 464 |
Msa0381470 | MtrunA17_Chr4g0049241 | 57.103 | 359 | 131 | 3 | 50 | 406 | 67 | 404 | 3.50e-145 | 418 |
Msa0381470 | MtrunA17_Chr4g0049231 | 54.366 | 355 | 143 | 1 | 52 | 406 | 22 | 357 | 6.16e-142 | 408 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0381470 | AT1G10070.1 | 63.591 | 401 | 123 | 3 | 10 | 406 | 7 | 388 | 0.0 | 517 |
Msa0381470 | AT1G10070.2 | 63.591 | 401 | 123 | 3 | 10 | 406 | 7 | 388 | 0.0 | 517 |
Msa0381470 | AT1G10070.3 | 67.953 | 337 | 89 | 1 | 70 | 406 | 1 | 318 | 1.17e-168 | 475 |
Msa0381470 | AT1G10060.2 | 58.561 | 403 | 139 | 4 | 10 | 405 | 2 | 383 | 2.65e-167 | 474 |
Msa0381470 | AT1G10060.5 | 57.664 | 411 | 145 | 5 | 1 | 404 | 90 | 478 | 7.43e-166 | 474 |
Msa0381470 | AT3G49680.2 | 62.185 | 357 | 114 | 3 | 51 | 405 | 73 | 410 | 1.33e-157 | 451 |
Msa0381470 | AT3G49680.1 | 62.185 | 357 | 114 | 3 | 51 | 405 | 75 | 412 | 1.35e-157 | 451 |
Msa0381470 | AT5G65780.1 | 60.556 | 360 | 122 | 2 | 47 | 405 | 74 | 414 | 2.55e-157 | 450 |
Msa0381470 | AT1G10060.3 | 63.393 | 336 | 104 | 1 | 70 | 405 | 1 | 317 | 9.20e-154 | 437 |
Msa0381470 | AT1G10060.7 | 59.946 | 367 | 119 | 4 | 10 | 369 | 2 | 347 | 1.26e-151 | 434 |
Msa0381470 | AT1G10060.4 | 58.777 | 376 | 126 | 5 | 1 | 369 | 90 | 443 | 2.87e-150 | 434 |
Msa0381470 | AT1G50090.1 | 55.228 | 373 | 145 | 3 | 36 | 406 | 3 | 355 | 5.66e-149 | 427 |
Msa0381470 | AT1G50110.1 | 53.908 | 371 | 150 | 3 | 36 | 406 | 3 | 352 | 3.70e-147 | 422 |
Msa0381470 | AT1G50110.2 | 54.599 | 337 | 133 | 2 | 70 | 406 | 1 | 317 | 2.36e-135 | 390 |
Msa0381470 | AT3G19710.1 | 47.838 | 370 | 173 | 2 | 37 | 406 | 2 | 351 | 2.50e-130 | 379 |
Msa0381470 | AT1G10060.1 | 69.048 | 252 | 78 | 0 | 48 | 299 | 45 | 296 | 3.17e-127 | 369 |
Msa0381470 | AT1G10060.6 | 59.804 | 306 | 113 | 4 | 1 | 299 | 90 | 392 | 7.43e-126 | 369 |
Find 137 sgRNAs with CRISPR-Local
Find 797 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATCTGCATATAGCTATTT+TGG | 0.101153 | 3_1:-83640350 | None:intergenic |
CAGTGAACTTTCCAAGTTTA+AGG | 0.116340 | 3_1:+83640573 | Msa0381470:CDS |
TGTAGTGCTGGCCAAAATTT+TGG | 0.137189 | 3_1:+83642359 | Msa0381470:CDS |
GTACATAGATTAAATTATTT+TGG | 0.184350 | 3_1:+83652765 | Msa0381470:three_prime_UTR |
CATCACTTTACCTTCTATTC+TGG | 0.200728 | 3_1:-83652321 | None:intergenic |
AAATGGTACCGGTGCATAAT+TGG | 0.204590 | 3_1:-83650008 | None:intergenic |
TTAGGAAGTGGTCCGGTTCT+TGG | 0.250877 | 3_1:+83649730 | Msa0381470:CDS |
ACCTGTTTGTATTCCTAAAA+TGG | 0.255480 | 3_1:-83652696 | None:intergenic |
TGCCAGTGATTTGGGTTATC+AGG | 0.275271 | 3_1:+83651086 | Msa0381470:CDS |
GCTGTCCATGTCCAAAATTT+TGG | 0.281068 | 3_1:-83642370 | None:intergenic |
CAATTCCGGACCCAACTTAC+AGG | 0.297018 | 3_1:+83642108 | Msa0381470:CDS |
AAAGCATACAGAAAGGAAAA+TGG | 0.301781 | 3_1:+83649399 | Msa0381470:CDS |
CATTGAAATTGCCAGTGATT+TGG | 0.302811 | 3_1:+83651077 | Msa0381470:CDS |
ACAGTGTAATATAATGTAAA+TGG | 0.304797 | 3_1:-83640510 | None:intergenic |
ATCATACCTGGCCATAATTT+AGG | 0.308609 | 3_1:-83642436 | None:intergenic |
TCCGCAGGGGTCCTAAATTA+TGG | 0.310746 | 3_1:+83642425 | Msa0381470:CDS |
GCAAAGGGTCGTTGTATCTT+AGG | 0.318014 | 3_1:+83649698 | Msa0381470:CDS |
GATTGGGACAGCCTTGGGTT+TGG | 0.329076 | 3_1:+83642302 | Msa0381470:CDS |
GCCCTCCCCTCTTCCAATTC+CGG | 0.331887 | 3_1:+83642094 | Msa0381470:CDS |
TCAACAAGATAAGATATATT+AGG | 0.337256 | 3_1:-83640411 | None:intergenic |
CTGTAAGTTGGGTCCGGAAT+TGG | 0.338583 | 3_1:-83642107 | None:intergenic |
CCCTGTTCGCAACTATTTCA+AGG | 0.338859 | 3_1:+83649795 | Msa0381470:CDS |
TCTTGTGATTCCGGAAAGTA+TGG | 0.340136 | 3_1:-83651046 | None:intergenic |
GGAAAGTATGGTTCCATTGA+TGG | 0.362249 | 3_1:-83651034 | None:intergenic |
TACTTCTGTATGTTTGGGTT+CGG | 0.364792 | 3_1:+83652956 | Msa0381470:three_prime_UTR |
ATGTGGATTGGGACAGCCTT+GGG | 0.366715 | 3_1:+83642297 | Msa0381470:CDS |
CCTTGACATGTAGGTCTTGA+TGG | 0.367499 | 3_1:+83650450 | Msa0381470:intron |
TATCTTAGGCCACTGCTCTT+AGG | 0.375755 | 3_1:+83649712 | Msa0381470:CDS |
ATTGAAATTGCCAGTGATTT+GGG | 0.377285 | 3_1:+83651078 | Msa0381470:CDS |
TTGGACATGGACAGCTTAAT+CGG | 0.380425 | 3_1:+83642378 | Msa0381470:CDS |
ACCTTGAAATAGTTGCGAAC+AGG | 0.382294 | 3_1:-83649796 | None:intergenic |
TGCTAGAGCAGTTTGCTTCA+AGG | 0.383554 | 3_1:-83649523 | None:intergenic |
CTATATGCAGATTGCATAGC+TGG | 0.393157 | 3_1:+83640359 | Msa0381470:five_prime_UTR |
TCTCAGAGTTCTCCCATGTA+TGG | 0.393826 | 3_1:+83651720 | Msa0381470:intron |
TATATGAGGAATGTGTATTC+AGG | 0.397711 | 3_1:-83649766 | None:intergenic |
AGAAGCAGTTTCCTTAAACT+TGG | 0.398954 | 3_1:-83640584 | None:intergenic |
AAGTGGTCCGGTTCTTGGTT+TGG | 0.404166 | 3_1:+83649735 | Msa0381470:CDS |
GTGGACTATAAAACAGGTTC+TGG | 0.405793 | 3_1:+83652647 | Msa0381470:CDS |
TATTATAGTTACCTGTAAGT+TGG | 0.436071 | 3_1:-83642119 | None:intergenic |
CGTGCTTCGCAACGCGGGAC+TGG | 0.439406 | 3_1:+83649968 | Msa0381470:CDS |
ATTATAGTTACCTGTAAGTT+GGG | 0.439858 | 3_1:-83642118 | None:intergenic |
ATTGATGGCAGGCGTTGAAA+TGG | 0.440858 | 3_1:-83651019 | None:intergenic |
AGGTAGTATTGAAGATAAGA+AGG | 0.442292 | 3_1:+83652715 | Msa0381470:CDS |
ATCAATGGAACCATACTTTC+CGG | 0.443211 | 3_1:+83651036 | Msa0381470:CDS |
CTTGCACAACTCTTGACAAA+TGG | 0.449586 | 3_1:-83652672 | None:intergenic |
TACCGGTGCATAATTGGAAA+TGG | 0.455649 | 3_1:-83650002 | None:intergenic |
CATGGACAGCTTAATCGGTA+TGG | 0.457574 | 3_1:+83642383 | Msa0381470:CDS |
ACTTAATTTGTATGTGGAAG+AGG | 0.457846 | 3_1:+83649937 | Msa0381470:CDS |
ATTTCAACGCCTGCCATCAA+TGG | 0.460138 | 3_1:+83651021 | Msa0381470:CDS |
GTATCACATACCAGAATAGA+AGG | 0.460502 | 3_1:+83652311 | Msa0381470:CDS |
AGGAAACTGCTTCTTCGTCC+TGG | 0.467038 | 3_1:+83640593 | Msa0381470:CDS |
CAGAGACTCGCAGTCACAAC+TGG | 0.467917 | 3_1:+83651750 | Msa0381470:CDS |
TGCAGGGTGGACTATAAAAC+AGG | 0.473120 | 3_1:+83652641 | Msa0381470:intron |
ATCGGAAAATCCTCTGCTCT+TGG | 0.477180 | 3_1:-83650485 | None:intergenic |
TCTCTGACTGTGACCATACA+TGG | 0.478487 | 3_1:-83651733 | None:intergenic |
AATGTGGATTGGGACAGCCT+TGG | 0.478960 | 3_1:+83642296 | Msa0381470:CDS |
GTCCGGAATTGGAAGAGGGG+AGG | 0.483252 | 3_1:-83642096 | None:intergenic |
AATGCAATTCGCATGAAGAT+TGG | 0.484572 | 3_1:+83649450 | Msa0381470:CDS |
CGCGCCACTTAATTTGTATG+TGG | 0.486258 | 3_1:+83649931 | Msa0381470:CDS |
GGCATCAACAAATTGATCAA+TGG | 0.490126 | 3_1:-83649502 | None:intergenic |
TAATGTATAGGTTCCTCCAC+CGG | 0.490433 | 3_1:+83649675 | Msa0381470:intron |
GCTGGAGCCAAACCAAGAAC+CGG | 0.491499 | 3_1:-83649742 | None:intergenic |
AGTTACCTGTAAGTTGGGTC+CGG | 0.496236 | 3_1:-83642113 | None:intergenic |
TGCTCTAGCAAACAAGCGTT+GGG | 0.496963 | 3_1:+83649536 | Msa0381470:CDS |
AGATACAACGACCCTTTGCC+CGG | 0.499668 | 3_1:-83649694 | None:intergenic |
CTGCTCTAGCAAACAAGCGT+TGG | 0.505553 | 3_1:+83649535 | Msa0381470:CDS |
TAGGTTCCTCCACCGGGCAA+AGG | 0.509281 | 3_1:+83649682 | Msa0381470:intron |
AGGCCACTGCTCTTAGGAAG+TGG | 0.509303 | 3_1:+83649718 | Msa0381470:CDS |
AGGTTCCTCCACCGGGCAAA+GGG | 0.509365 | 3_1:+83649683 | Msa0381470:intron |
AAGCATACAGAAAGGAAAAT+GGG | 0.510935 | 3_1:+83649400 | Msa0381470:CDS |
CCTTGAAATAGTTGCGAACA+GGG | 0.513370 | 3_1:-83649795 | None:intergenic |
GCTGTCGGTGTTGCTCCTGT+AGG | 0.514968 | 3_1:+83652286 | Msa0381470:CDS |
AACATACAGAAGTAAAATAC+AGG | 0.515295 | 3_1:-83652947 | None:intergenic |
GTTGGGTCCGGAATTGGAAG+AGG | 0.515795 | 3_1:-83642101 | None:intergenic |
AACGACCCTTTGCCCGGTGG+AGG | 0.518065 | 3_1:-83649688 | None:intergenic |
ATGAGTACGCTAATGTGGAT+TGG | 0.520629 | 3_1:+83642285 | Msa0381470:CDS |
TCCGGAATTGGAAGAGGGGA+GGG | 0.522473 | 3_1:-83642095 | None:intergenic |
TACGTTACAAAATGTAGTGC+TGG | 0.523205 | 3_1:+83642347 | Msa0381470:CDS |
CTGTCGGTGTTGCTCCTGTA+GGG | 0.530130 | 3_1:+83652287 | Msa0381470:CDS |
AAGTAAAATACAGGTGAAGA+AGG | 0.530386 | 3_1:-83652938 | None:intergenic |
TTCTGTACAGGAACTGCTGT+CGG | 0.530561 | 3_1:+83652271 | Msa0381470:CDS |
GGTAGTATTGAAGATAAGAA+GGG | 0.530796 | 3_1:+83652716 | Msa0381470:CDS |
AACCATTTCCAATTATGCAC+CGG | 0.531718 | 3_1:+83650000 | Msa0381470:CDS |
AGGAATGTGTATTCAGGTGC+TGG | 0.532284 | 3_1:-83649760 | None:intergenic |
TCTTCCACATACAAATTAAG+TGG | 0.533831 | 3_1:-83649935 | None:intergenic |
TGGTTATCGTTCTTCCTCCA+AGG | 0.534170 | 3_1:+83640613 | Msa0381470:CDS |
GTAACGTACATGAAATCGGT+TGG | 0.536355 | 3_1:-83642332 | None:intergenic |
ATTGAACTTAGCCCATCCGC+AGG | 0.539047 | 3_1:+83642410 | Msa0381470:CDS |
TGAGTACGCTAATGTGGATT+GGG | 0.540805 | 3_1:+83642286 | Msa0381470:CDS |
AATATATAGGGATTATTCGA+AGG | 0.543618 | 3_1:+83649372 | Msa0381470:intron |
TAATTTAGGACCCCTGCGGA+TGG | 0.548755 | 3_1:-83642422 | None:intergenic |
AGGGGTCCTAAATTATGGCC+AGG | 0.559751 | 3_1:+83642430 | Msa0381470:CDS |
ATGGACAGCTTAATCGGTAT+GGG | 0.560555 | 3_1:+83642384 | Msa0381470:CDS |
TACCTGATAACCCAAATCAC+TGG | 0.560844 | 3_1:-83651088 | None:intergenic |
CAGTCCCGCGTTGCGAAGCA+CGG | 0.561077 | 3_1:-83649967 | None:intergenic |
TTGACCGTGCTTCGCAACGC+GGG | 0.561096 | 3_1:+83649963 | Msa0381470:CDS |
TGGTATGTGATACTCCCTAC+AGG | 0.561876 | 3_1:-83652301 | None:intergenic |
CGATGATGAGTACGCTAATG+TGG | 0.569452 | 3_1:+83642280 | Msa0381470:CDS |
AATGTATAGGTTCCTCCACC+GGG | 0.570735 | 3_1:+83649676 | Msa0381470:intron |
ACAGGTGAAGAAGGACTGAA+GGG | 0.574007 | 3_1:-83652929 | None:intergenic |
TTGGGTCCGGAATTGGAAGA+GGG | 0.575596 | 3_1:-83642100 | None:intergenic |
GAACAGGGGAAGCATATATG+AGG | 0.580432 | 3_1:-83649780 | None:intergenic |
ATATATTCGAAAGGCACCAA+GGG | 0.580844 | 3_1:+83652900 | Msa0381470:three_prime_UTR |
AGTATGGTTCCATTGATGGC+AGG | 0.580853 | 3_1:-83651030 | None:intergenic |
TAAAACGTTGATCACCTTGG+AGG | 0.582579 | 3_1:-83640627 | None:intergenic |
ACAGAAAACTTCATCTGCCT+CGG | 0.585007 | 3_1:-83652254 | None:intergenic |
CATATATTCGAAAGGCACCA+AGG | 0.585955 | 3_1:+83652899 | Msa0381470:three_prime_UTR |
AATTTAGGACCCCTGCGGAT+GGG | 0.586287 | 3_1:-83642421 | None:intergenic |
GGAAGAGCGCGTTGTTGCTG+TGG | 0.591202 | 3_1:+83652222 | Msa0381470:CDS |
TTGGAGGAAGAACGATAACC+AGG | 0.591557 | 3_1:-83640611 | None:intergenic |
TACAGGTGAAGAAGGACTGA+AGG | 0.598119 | 3_1:-83652930 | None:intergenic |
ACTGCTCTTAGGAAGTGGTC+CGG | 0.600004 | 3_1:+83649723 | Msa0381470:CDS |
AGGTGAAGAAGGACTGAAGG+GGG | 0.605483 | 3_1:-83652927 | None:intergenic |
TCAACAAATTGATCAATGGA+AGG | 0.611879 | 3_1:-83649498 | None:intergenic |
TTTGACCGTGCTTCGCAACG+CGG | 0.611947 | 3_1:+83649962 | Msa0381470:CDS |
GTATTGAAGATAAGAAGGGA+TGG | 0.616637 | 3_1:+83652720 | Msa0381470:CDS |
TTGAACTTAGCCCATCCGCA+GGG | 0.617818 | 3_1:+83642411 | Msa0381470:CDS |
CACATACAAATTAAGTGGCG+CGG | 0.630226 | 3_1:-83649930 | None:intergenic |
CAAAATAGAGCCAAGAGCAG+AGG | 0.632269 | 3_1:+83650475 | Msa0381470:CDS |
TTGGCATGAGTCCAAACCCA+AGG | 0.634099 | 3_1:-83642313 | None:intergenic |
ATTGTGTACATATATTCGAA+AGG | 0.640800 | 3_1:+83652891 | Msa0381470:three_prime_UTR |
CTCTGACTGTGACCATACAT+GGG | 0.646126 | 3_1:-83651732 | None:intergenic |
CAGGTGAAGAAGGACTGAAG+GGG | 0.651787 | 3_1:-83652928 | None:intergenic |
GTGTAATATAATGTAAATGG+TGG | 0.656734 | 3_1:-83640507 | None:intergenic |
AGGCACGAAAGCATACAGAA+AGG | 0.658001 | 3_1:+83649392 | Msa0381470:CDS |
TGAATCAAGGTATAACACAT+CGG | 0.667794 | 3_1:-83650503 | None:intergenic |
TAACAGATAGGGGCTTACAA+TGG | 0.677239 | 3_1:+83642059 | Msa0381470:intron |
TATTAGGAGAAGCAATGACA+AGG | 0.677664 | 3_1:-83640395 | None:intergenic |
TGAACTTAGCCCATCCGCAG+GGG | 0.684106 | 3_1:+83642412 | Msa0381470:CDS |
GGACCACTTCCTAAGAGCAG+TGG | 0.684872 | 3_1:-83649721 | None:intergenic |
TACAACGACCCTTTGCCCGG+TGG | 0.687415 | 3_1:-83649691 | None:intergenic |
GGTGAAGAAGGACTGAAGGG+GGG | 0.701948 | 3_1:-83652926 | None:intergenic |
CTTGAAATAGTTGCGAACAG+GGG | 0.708149 | 3_1:-83649794 | None:intergenic |
TGGGTCCGGAATTGGAAGAG+GGG | 0.711513 | 3_1:-83642099 | None:intergenic |
TGCTGTGGATGAATTGACCG+AGG | 0.715955 | 3_1:+83652237 | Msa0381470:CDS |
GCCATAATTTAGGACCCCTG+CGG | 0.723216 | 3_1:-83642426 | None:intergenic |
TATATTCGAAAGGCACCAAG+GGG | 0.728534 | 3_1:+83652901 | Msa0381470:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGAATCATTTTTAATTTTTT+TGG | + | chr3_1:83641290-83641309 | Msa0381470:intron | 10.0% |
!!! | TTTTAAAAGATATATATACA+AGG | - | chr3_1:83641821-83641840 | None:intergenic | 10.0% |
!!! | AATACCTTTTTATTTTATTA+CGG | + | chr3_1:83641871-83641890 | Msa0381470:intron | 10.0% |
!!! | AAGGTTTTTTTTTTTTTTTT+TGG | + | chr3_1:83642190-83642209 | Msa0381470:intron | 10.0% |
!!! | AGGTTTTTTTTTTTTTTTTT+GGG | + | chr3_1:83642191-83642210 | Msa0381470:intron | 10.0% |
!!! | TGTTTTTCTAATATTATTTT+GGG | - | chr3_1:83642765-83642784 | None:intergenic | 10.0% |
!! | AAAAAAAAAATACGTAAAAT+AGG | + | chr3_1:83642828-83642847 | Msa0381470:intron | 10.0% |
!!! | TTTTTTTTTTTTTTGAGTAA+TGG | - | chr3_1:83643645-83643664 | None:intergenic | 10.0% |
!!! | TATATATTATAGACAATTTT+AGG | - | chr3_1:83643735-83643754 | None:intergenic | 10.0% |
!! | TAAAATTGTCTATAATATAT+AGG | + | chr3_1:83643734-83643753 | Msa0381470:intron | 10.0% |
!! | TTCATAAAATAAGTAATAAA+AGG | + | chr3_1:83644388-83644407 | Msa0381470:intron | 10.0% |
!! | ACAAAAAAACATTTAAAAAA+AGG | + | chr3_1:83644982-83645001 | Msa0381470:intron | 10.0% |
!!! | ATTTAAAATTGACATATTAA+TGG | + | chr3_1:83645980-83645999 | Msa0381470:intron | 10.0% |
!!! | TGAATTTTAAAAAGTAAAAA+TGG | + | chr3_1:83646820-83646839 | Msa0381470:intron | 10.0% |
!! | TTCAATATATAAATATTAGA+TGG | + | chr3_1:83647062-83647081 | Msa0381470:intron | 10.0% |
!!! | AGCTATAAATTTTTATTTTA+TGG | - | chr3_1:83647376-83647395 | None:intergenic | 10.0% |
!!! | TGTATTTTTTTTATTTCAAA+TGG | + | chr3_1:83648415-83648434 | Msa0381470:intron | 10.0% |
!! | CTTTAATAAAAAAAATTGAT+TGG | - | chr3_1:83650591-83650610 | None:intergenic | 10.0% |
!!! | TTTTTTATTAAAGATATGTT+AGG | + | chr3_1:83650598-83650617 | Msa0381470:intron | 10.0% |
!! | TCATATATAAATAGAAAAAT+TGG | - | chr3_1:83652154-83652173 | None:intergenic | 10.0% |
!! | ATAAAAAAAAGTAAACTATA+AGG | + | chr3_1:83652378-83652397 | Msa0381470:intron | 10.0% |
!!! | ACTTTAAGTTTTATTTTTGT+CGG | - | chr3_1:83640953-83640972 | None:intergenic | 15.0% |
!!! | TCATTAACATTTTCATATTA+TGG | + | chr3_1:83640975-83640994 | Msa0381470:intron | 15.0% |
!!! | TAAATCTCCATAATATTTTA+AGG | + | chr3_1:83641178-83641197 | Msa0381470:intron | 15.0% |
!!! | AAATCTCCATAATATTTTAA+GGG | + | chr3_1:83641179-83641198 | Msa0381470:intron | 15.0% |
!! | TTAATTCCCTTAAAATATTA+TGG | - | chr3_1:83641188-83641207 | None:intergenic | 15.0% |
!!! | ATACCTTTTTATTTTATTAC+GGG | + | chr3_1:83641872-83641891 | Msa0381470:intron | 15.0% |
!!! | GGTTTTTTTTTTTTTTTTTG+GGG | + | chr3_1:83642192-83642211 | Msa0381470:intron | 15.0% |
!!! | CTGTTTTTCTAATATTATTT+TGG | - | chr3_1:83642766-83642785 | None:intergenic | 15.0% |
!! | ATCTTAAGATATTAGATTTA+TGG | + | chr3_1:83643533-83643552 | Msa0381470:intron | 15.0% |
!!! | AATAAGTTGATCATTTATTT+TGG | - | chr3_1:83643826-83643845 | None:intergenic | 15.0% |
!! | CAAATAGTAGAAAATTATAA+GGG | - | chr3_1:83643868-83643887 | None:intergenic | 15.0% |
!! | ACAAATAGTAGAAAATTATA+AGG | - | chr3_1:83643869-83643888 | None:intergenic | 15.0% |
!!! | AAAAACTATTTATTTTTTGG+TGG | + | chr3_1:83643907-83643926 | Msa0381470:intron | 15.0% |
!!! | ATATATTATGTTGACATTTT+CGG | - | chr3_1:83646160-83646179 | None:intergenic | 15.0% |
!! | AACATAATATATCAATTTGA+AGG | + | chr3_1:83646168-83646187 | Msa0381470:intron | 15.0% |
!!! | TTTTACTATTGAGATTTTTA+TGG | - | chr3_1:83647322-83647341 | None:intergenic | 15.0% |
!! | GTTATAAGAATAAAACAAAA+AGG | - | chr3_1:83647742-83647761 | None:intergenic | 15.0% |
!!! | ATAGTTCATTTATTTTAGTT+GGG | - | chr3_1:83647918-83647937 | None:intergenic | 15.0% |
!!! | TTTTATTTACTCTTTTTATG+AGG | - | chr3_1:83648460-83648479 | None:intergenic | 15.0% |
!!! | TTTTTTTTCTGAAAGAATAA+AGG | + | chr3_1:83648944-83648963 | Msa0381470:intron | 15.0% |
!!! | CTTTTATATATAGATTGTAT+CGG | + | chr3_1:83649117-83649136 | Msa0381470:intron | 15.0% |
!! | CATTTAAAAATGAACTATAT+AGG | - | chr3_1:83649200-83649219 | None:intergenic | 15.0% |
!! | TAGGTCAAATTTAATTAAAA+TGG | - | chr3_1:83649588-83649607 | None:intergenic | 15.0% |
!!! | TAAAAGCATTAACAATTTTT+AGG | - | chr3_1:83649607-83649626 | None:intergenic | 15.0% |
!!! | TTTATTTAAATTCTGGTTTT+CGG | + | chr3_1:83650862-83650881 | Msa0381470:intron | 15.0% |
!!! | AACATTTTTATTAGATACAA+AGG | + | chr3_1:83652351-83652370 | Msa0381470:intron | 15.0% |
!!! | TTTATCTAGATAGAAAATTT+TGG | - | chr3_1:83652473-83652492 | None:intergenic | 15.0% |
!!! | TATTAACCTTTTTATTTTGA+AGG | + | chr3_1:83652494-83652513 | Msa0381470:intron | 15.0% |
!! | ATATATATCAACAATATTTC+AGG | - | chr3_1:83652616-83652635 | None:intergenic | 15.0% |
!! | TTGATATATATATATATGCA+GGG | + | chr3_1:83652625-83652644 | Msa0381470:intron | 15.0% |
!!! | GTACATAGATTAAATTATTT+TGG | + | chr3_1:83652765-83652784 | Msa0381470:three_prime_UTR | 15.0% |
!! | TCAACAAGATAAGATATATT+AGG | - | chr3_1:83640414-83640433 | None:intergenic | 20.0% |
!! | ACAGTGTAATATAATGTAAA+TGG | - | chr3_1:83640513-83640532 | None:intergenic | 20.0% |
!!! | TTTAATTTTCTCATCAAAGT+CGG | + | chr3_1:83640669-83640688 | Msa0381470:intron | 20.0% |
!!! | ATTATTTTTTTCTTTCTCAG+TGG | + | chr3_1:83640790-83640809 | Msa0381470:intron | 20.0% |
!! | AACTAAGACATTTGATATTA+AGG | + | chr3_1:83640827-83640846 | Msa0381470:intron | 20.0% |
!!! | TGATTTTCTTCTTCAAATTT+TGG | + | chr3_1:83640895-83640914 | Msa0381470:intron | 20.0% |
!!! | TACATGACATTTTTATAATG+GGG | - | chr3_1:83641034-83641053 | None:intergenic | 20.0% |
!!! | GTACATGACATTTTTATAAT+GGG | - | chr3_1:83641035-83641054 | None:intergenic | 20.0% |
!!! | AGTACATGACATTTTTATAA+TGG | - | chr3_1:83641036-83641055 | None:intergenic | 20.0% |
!! | CATATAGGAAAATTTAGATT+CGG | - | chr3_1:83641079-83641098 | None:intergenic | 20.0% |
!!! | GTATTTCACTTTTTTCATAT+AGG | - | chr3_1:83641094-83641113 | None:intergenic | 20.0% |
!! | AAAAAGTGAAATACCAATAT+AGG | + | chr3_1:83641100-83641119 | Msa0381470:intron | 20.0% |
!! | TTTAAATTAGTATAGAGTGA+AGG | - | chr3_1:83641126-83641145 | None:intergenic | 20.0% |
!! | ACTAATTTAAAGACACATTT+AGG | + | chr3_1:83641135-83641154 | Msa0381470:intron | 20.0% |
!! | CTAATTTAAAGACACATTTA+GGG | + | chr3_1:83641136-83641155 | Msa0381470:intron | 20.0% |
!! | CTCATTTATTAGTACTAATT+GGG | - | chr3_1:83641440-83641459 | None:intergenic | 20.0% |
!! | CAATTAGTACTAATAAATGA+GGG | + | chr3_1:83641439-83641458 | Msa0381470:intron | 20.0% |
!! | GGAAAATAAAATAGTTAGAT+AGG | + | chr3_1:83641460-83641479 | Msa0381470:intron | 20.0% |
!! | AATAAAATAGTTAGATAGGA+AGG | + | chr3_1:83641464-83641483 | Msa0381470:intron | 20.0% |
!! | TCTTGTGTATTATATTATTC+AGG | + | chr3_1:83641494-83641513 | Msa0381470:intron | 20.0% |
!! | CTTGTGTATTATATTATTCA+GGG | + | chr3_1:83641495-83641514 | Msa0381470:intron | 20.0% |
!! | TTGTGTATTATATTATTCAG+GGG | + | chr3_1:83641496-83641515 | Msa0381470:intron | 20.0% |
!! | TTGTTTAAGGAAATAATATC+CGG | - | chr3_1:83641944-83641963 | None:intergenic | 20.0% |
!!! | TAATACACAAGTTTTGTTTA+AGG | - | chr3_1:83641957-83641976 | None:intergenic | 20.0% |
!!! | TTTGTATGTATCTTTTTTAG+AGG | + | chr3_1:83642500-83642519 | Msa0381470:intron | 20.0% |
!!! | AGATTTAAGATACGTAAAAT+AGG | + | chr3_1:83642794-83642813 | Msa0381470:intron | 20.0% |
!! | AATCAATCGAACTATTTATT+AGG | - | chr3_1:83642912-83642931 | None:intergenic | 20.0% |
!! | ATTCGGAAAAAAAAAATGTA+TGG | - | chr3_1:83643087-83643106 | None:intergenic | 20.0% |
!! | TAACAAAATACACATGTATA+AGG | + | chr3_1:83643335-83643354 | Msa0381470:intron | 20.0% |
!! | ATCTAATATCTTAAGATTCT+GGG | - | chr3_1:83643530-83643549 | None:intergenic | 20.0% |
!! | AATCTAATATCTTAAGATTC+TGG | - | chr3_1:83643531-83643550 | None:intergenic | 20.0% |
!!! | TTTTTTTTTGAGTAATGGTT+AGG | - | chr3_1:83643640-83643659 | None:intergenic | 20.0% |
!!! | ATATTATAGACAATTTTAGG+AGG | - | chr3_1:83643732-83643751 | None:intergenic | 20.0% |
!!! | TTTGTTTGTTTTAGTTTAGA+AGG | - | chr3_1:83644492-83644511 | None:intergenic | 20.0% |
!! | TACATAATAGAACAAAATAG+GGG | - | chr3_1:83645464-83645483 | None:intergenic | 20.0% |
!! | CTACATAATAGAACAAAATA+GGG | - | chr3_1:83645465-83645484 | None:intergenic | 20.0% |
!! | TTAAAAATTGGTAAACAACA+AGG | - | chr3_1:83645904-83645923 | None:intergenic | 20.0% |
!!! | TTGTTTACCAATTTTTAACA+TGG | + | chr3_1:83645906-83645925 | Msa0381470:intron | 20.0% |
!!! | TTTTCCATATCTTAACAAAT+TGG | - | chr3_1:83646048-83646067 | None:intergenic | 20.0% |
!!! | AAAACACAACATAGATTTTT+AGG | + | chr3_1:83646255-83646274 | Msa0381470:intron | 20.0% |
!!! | TATAAGTGTAAAAGTATGTT+GGG | - | chr3_1:83646742-83646761 | None:intergenic | 20.0% |
!!! | ATTTAATAATTGATGGCATA+TGG | + | chr3_1:83647472-83647491 | Msa0381470:intron | 20.0% |
!!! | TTTAATAATTGATGGCATAT+GGG | + | chr3_1:83647473-83647492 | Msa0381470:intron | 20.0% |
!!! | TCTTAATTTGCATTATCTTA+TGG | - | chr3_1:83647604-83647623 | None:intergenic | 20.0% |
!!! | TAAAACAAAAAGGCAATTTT+TGG | - | chr3_1:83647732-83647751 | None:intergenic | 20.0% |
!!! | GATAGTTCATTTATTTTAGT+TGG | - | chr3_1:83647919-83647938 | None:intergenic | 20.0% |
!!! | ATATTTTCTATGGATTTAAG+CGG | - | chr3_1:83649161-83649180 | None:intergenic | 20.0% |
!! | TAGACCAATTATTAATGTAT+AGG | + | chr3_1:83649663-83649682 | Msa0381470:intron | 20.0% |
!! | TATGTATATATGAGAAAGAT+TGG | - | chr3_1:83651216-83651235 | None:intergenic | 20.0% |
!! | TTCAACATTAAAAATTCCTT+CGG | - | chr3_1:83651289-83651308 | None:intergenic | 20.0% |
!! | AAGCTATTCTTTAAATTGAT+TGG | + | chr3_1:83651520-83651539 | Msa0381470:intron | 20.0% |
!! | CTTCATAATAGAACATTATA+AGG | + | chr3_1:83651591-83651610 | Msa0381470:intron | 20.0% |
!!! | ATTTTCAGGACATAATTTTT+AGG | - | chr3_1:83652002-83652021 | None:intergenic | 20.0% |
!!! | TTTATTGATTAAGACCAAAT+CGG | + | chr3_1:83652192-83652211 | Msa0381470:intron | 20.0% |
!! | TATCTTCCTTCAAAATAAAA+AGG | - | chr3_1:83652503-83652522 | None:intergenic | 20.0% |
!! | GTTGATATATATATATATGC+AGG | + | chr3_1:83652624-83652643 | Msa0381470:intron | 20.0% |
!!! | AAATTATTTTGGCATGAAAA+TGG | + | chr3_1:83652776-83652795 | Msa0381470:three_prime_UTR | 20.0% |
!!! | TATTTTACTTCTGTATGTTT+GGG | + | chr3_1:83652951-83652970 | Msa0381470:three_prime_UTR | 20.0% |
!!! | GCAATTTTTTATACAACACT+TGG | - | chr3_1:83640320-83640339 | None:intergenic | 25.0% |
! | GTGTAATATAATGTAAATGG+TGG | - | chr3_1:83640510-83640529 | None:intergenic | 25.0% |
! | ATTTATAAGTCACGAGAAAT+CGG | - | chr3_1:83641326-83641345 | None:intergenic | 25.0% |
!!! | GATTTTCACTTTTAAACCTA+CGG | - | chr3_1:83641389-83641408 | None:intergenic | 25.0% |
! | TTTATTAGTACTAATTGGGT+TGG | - | chr3_1:83641436-83641455 | None:intergenic | 25.0% |
! | CCTCATTTATTAGTACTAAT+TGG | - | chr3_1:83641441-83641460 | None:intergenic | 25.0% |
! | CCAATTAGTACTAATAAATG+AGG | + | chr3_1:83641438-83641457 | Msa0381470:intron | 25.0% |
! | AGACCCGTAATAAAATAAAA+AGG | - | chr3_1:83641878-83641897 | None:intergenic | 25.0% |
! | TGTTTAAGGAAATAATATCC+GGG | - | chr3_1:83641943-83641962 | None:intergenic | 25.0% |
!! | GAAGCATTCATTTAAACATT+TGG | + | chr3_1:83642015-83642034 | Msa0381470:intron | 25.0% |
! | AAAATCACATCATAACAGAT+AGG | + | chr3_1:83642047-83642066 | Msa0381470:intron | 25.0% |
! | AAATCACATCATAACAGATA+GGG | + | chr3_1:83642048-83642067 | Msa0381470:intron | 25.0% |
! | ATTATAGTTACCTGTAAGTT+GGG | - | chr3_1:83642121-83642140 | None:intergenic | 25.0% |
! | TATTATAGTTACCTGTAAGT+TGG | - | chr3_1:83642122-83642141 | None:intergenic | 25.0% |
!! | TACGTAATTGTAATTTGCAA+AGG | + | chr3_1:83642171-83642190 | Msa0381470:intron | 25.0% |
!! | TTTTGTAACGTACATGAAAT+CGG | - | chr3_1:83642339-83642358 | None:intergenic | 25.0% |
! | ACATGTTGAGATCTTTATAT+TGG | - | chr3_1:83642625-83642644 | None:intergenic | 25.0% |
! | AATTATATAATCACTTGACC+AGG | + | chr3_1:83642663-83642682 | Msa0381470:intron | 25.0% |
! | AATCGAACTATTTATTAGGA+TGG | - | chr3_1:83642908-83642927 | None:intergenic | 25.0% |
! | ACAAGAAGCAAGTAAAATAT+GGG | - | chr3_1:83643004-83643023 | None:intergenic | 25.0% |
! | TACAAGAAGCAAGTAAAATA+TGG | - | chr3_1:83643005-83643024 | None:intergenic | 25.0% |
!! | AATCTTTGGGTTCAAATATT+CGG | - | chr3_1:83643104-83643123 | None:intergenic | 25.0% |
!! | TTCCAGAAATTTGTTTATTG+TGG | + | chr3_1:83643233-83643252 | Msa0381470:intron | 25.0% |
!! | TCCAGAAATTTGTTTATTGT+GGG | + | chr3_1:83643234-83643253 | Msa0381470:intron | 25.0% |
!!! | AACTATTTATTTTTTGGTGG+TGG | + | chr3_1:83643910-83643929 | Msa0381470:intron | 25.0% |
! | GACAAAACATAAAATATGCA+AGG | - | chr3_1:83643955-83643974 | None:intergenic | 25.0% |
! | AAATTGCATAAACTTCAACA+TGG | + | chr3_1:83644049-83644068 | Msa0381470:intron | 25.0% |
! | ATATGGAAGGTAATATTTGA+CGG | + | chr3_1:83644291-83644310 | Msa0381470:intron | 25.0% |
!!! | CTTACTTTTGATATTTTGGA+TGG | - | chr3_1:83644580-83644599 | None:intergenic | 25.0% |
! | TCATGACTATTTAATTAGGT+AGG | - | chr3_1:83644649-83644668 | None:intergenic | 25.0% |
! | CTCTTCATGACTATTTAATT+AGG | - | chr3_1:83644653-83644672 | None:intergenic | 25.0% |
! | GAAGTATGAAGTAAATGTAA+AGG | - | chr3_1:83644724-83644743 | None:intergenic | 25.0% |
! | GTGAAATTATGCATGAAAAT+TGG | - | chr3_1:83644783-83644802 | None:intergenic | 25.0% |
! | AGAATCATTTATACCTAACT+GGG | - | chr3_1:83644865-83644884 | None:intergenic | 25.0% |
! | TAGAATCATTTATACCTAAC+TGG | - | chr3_1:83644866-83644885 | None:intergenic | 25.0% |
! | TTATCAGTAAATGAGATTGA+AGG | - | chr3_1:83645130-83645149 | None:intergenic | 25.0% |
! | ATATGACGAAACTGAAAAAT+TGG | - | chr3_1:83645169-83645188 | None:intergenic | 25.0% |
! | TTCGTCATATAATAAAAGCA+AGG | + | chr3_1:83645179-83645198 | Msa0381470:intron | 25.0% |
!!! | AAGCAAGGCTTTTTATTTTT+CGG | + | chr3_1:83645194-83645213 | Msa0381470:intron | 25.0% |
! | TTGCAAAACTATATTTCTCA+TGG | - | chr3_1:83645325-83645344 | None:intergenic | 25.0% |
!! | ATGTCGTGTGTATATTTTAT+AGG | - | chr3_1:83645361-83645380 | None:intergenic | 25.0% |
!! | TCATGTTTTCATATTTCTCA+TGG | - | chr3_1:83645395-83645414 | None:intergenic | 25.0% |
! | CCTACATAATAGAACAAAAT+AGG | - | chr3_1:83645466-83645485 | None:intergenic | 25.0% |
!! | CCTATTTTGTTCTATTATGT+AGG | + | chr3_1:83645463-83645482 | Msa0381470:intron | 25.0% |
!! | ACAAACAAAGTATCATTGAA+TGG | + | chr3_1:83645601-83645620 | Msa0381470:intron | 25.0% |
! | AAACGATTTAAGTAGGAAAT+AGG | + | chr3_1:83645664-83645683 | Msa0381470:intron | 25.0% |
! | TATTTACATGTTTCTCTAAC+AGG | - | chr3_1:83645938-83645957 | None:intergenic | 25.0% |
!! | AATTATTTCTTCTTACTGCT+TGG | - | chr3_1:83645963-83645982 | None:intergenic | 25.0% |
! | TCAATTATCTTGATCTGTTT+AGG | - | chr3_1:83646236-83646255 | None:intergenic | 25.0% |
! | AACATCATCATTTACTTGAT+CGG | + | chr3_1:83646366-83646385 | Msa0381470:intron | 25.0% |
! | GACACATACTTAATCAAAAT+GGG | + | chr3_1:83646506-83646525 | Msa0381470:intron | 25.0% |
! | ATACTTAATCAAAATGGGAT+TGG | + | chr3_1:83646511-83646530 | Msa0381470:intron | 25.0% |
!!! | GTATTTAATTTGGTAGCATT+TGG | - | chr3_1:83646712-83646731 | None:intergenic | 25.0% |
!! | GTATAAGTGTAAAAGTATGT+TGG | - | chr3_1:83646743-83646762 | None:intergenic | 25.0% |
!! | AACTAGAATGATTTTGTTGA+AGG | - | chr3_1:83646983-83647002 | None:intergenic | 25.0% |
! | CTACTAATTCACAATTCATA+TGG | + | chr3_1:83647102-83647121 | Msa0381470:intron | 25.0% |
!!! | GCTTTTAGCTACTTTTTAAT+TGG | + | chr3_1:83647273-83647292 | Msa0381470:intron | 25.0% |
!!! | ATTCAATTAGTTACTTTTGC+AGG | - | chr3_1:83647553-83647572 | None:intergenic | 25.0% |
!! | TCTTATGGAATAGTTCTATA+TGG | - | chr3_1:83647589-83647608 | None:intergenic | 25.0% |
! | ATGCAAATTAAGAAGTTCAA+AGG | + | chr3_1:83647611-83647630 | Msa0381470:intron | 25.0% |
! | CAATTAAGAAAACAAAGACT+TGG | + | chr3_1:83647639-83647658 | Msa0381470:intron | 25.0% |
! | CGTGATAAACAAAGTTTATA+AGG | + | chr3_1:83647664-83647683 | Msa0381470:intron | 25.0% |
! | TAAACCAAGTATAGCAAATT+GGG | - | chr3_1:83647765-83647784 | None:intergenic | 25.0% |
! | TTGTGCTTCTATTACTTTAA+TGG | - | chr3_1:83647828-83647847 | None:intergenic | 25.0% |
! | TTTGTATTCCTTTGTATTGT+GGG | - | chr3_1:83647945-83647964 | None:intergenic | 25.0% |
!!! | TTTTGGTTCAGTTATTAGTT+GGG | - | chr3_1:83648082-83648101 | None:intergenic | 25.0% |
!!! | TTTTTGGTTCAGTTATTAGT+TGG | - | chr3_1:83648083-83648102 | None:intergenic | 25.0% |
!!! | CAAATTTTAGTATTGCACAA+TGG | - | chr3_1:83648397-83648416 | None:intergenic | 25.0% |
!!! | TCAATTCACAGATTCTTTTT+TGG | - | chr3_1:83648720-83648739 | None:intergenic | 25.0% |
! | AAAAAGAATCTGTGAATTGA+AGG | + | chr3_1:83648720-83648739 | Msa0381470:intron | 25.0% |
!!! | TAATTTTAACCTAAACCCTA+GGG | - | chr3_1:83649072-83649091 | None:intergenic | 25.0% |
!! | TAGGGTTTAGGTTAAAATTA+GGG | + | chr3_1:83649072-83649091 | Msa0381470:intron | 25.0% |
!! | GCATCACTATATATTTTCTA+TGG | - | chr3_1:83649171-83649190 | None:intergenic | 25.0% |
! | AATATATAGGGATTATTCGA+AGG | + | chr3_1:83649372-83649391 | Msa0381470:intron | 25.0% |
! | TAATTAAAATGGACACATGA+GGG | - | chr3_1:83649577-83649596 | None:intergenic | 25.0% |
! | TTAATTAAAATGGACACATG+AGG | - | chr3_1:83649578-83649597 | None:intergenic | 25.0% |
! | GGAACCTATACATTAATAAT+TGG | - | chr3_1:83649670-83649689 | None:intergenic | 25.0% |
! | TTTATTAACACCAATTTGGA+TGG | + | chr3_1:83649884-83649903 | Msa0381470:intron | 25.0% |
! | AATTGAGTGAAGATTTGAAA+TGG | - | chr3_1:83650028-83650047 | None:intergenic | 25.0% |
!! | ATGTAGCTTTTGTCAAATTA+TGG | + | chr3_1:83650156-83650175 | Msa0381470:intron | 25.0% |
!!! | TGTCATGTTAGTATTAGTTT+TGG | - | chr3_1:83650279-83650298 | None:intergenic | 25.0% |
! | AGGTACATTAGTTAAAAACA+AGG | - | chr3_1:83650372-83650391 | None:intergenic | 25.0% |
!! | TTTTCTTACTGTTTGAATCA+AGG | - | chr3_1:83650519-83650538 | None:intergenic | 25.0% |
! | TTCAAACAGTAAGAAAAATC+TGG | + | chr3_1:83650522-83650541 | Msa0381470:CDS | 25.0% |
!! | TTGTAACATTTTTATTGCCA+AGG | + | chr3_1:83650558-83650577 | Msa0381470:CDS | 25.0% |
! | AATTGATTGGAATAATACCT+TGG | - | chr3_1:83650578-83650597 | None:intergenic | 25.0% |
!!! | TTTCTAGTGTAACAAACTTT+TGG | - | chr3_1:83650834-83650853 | None:intergenic | 25.0% |
! | CAGAAGGTTTATTTAAATTC+TGG | + | chr3_1:83650855-83650874 | Msa0381470:intron | 25.0% |
! | AACTTGGATTTCAATTTCTT+AGG | + | chr3_1:83650990-83651009 | Msa0381470:intron | 25.0% |
! | ACTTGGATTTCAATTTCTTA+GGG | + | chr3_1:83650991-83651010 | Msa0381470:intron | 25.0% |
!!! | AGTTGATTTTTTTTTACCGA+AGG | + | chr3_1:83651270-83651289 | Msa0381470:intron | 25.0% |
! | AGATGAAAATGATGTATGAT+AGG | - | chr3_1:83651332-83651351 | None:intergenic | 25.0% |
!! | ATTTCTATTGTTTGAGTTCA+TGG | - | chr3_1:83651445-83651464 | None:intergenic | 25.0% |
! | TACATATAGTGTATTGTGAT+TGG | + | chr3_1:83651472-83651491 | Msa0381470:intron | 25.0% |
! | TGAAATACATATCATAAGTG+TGG | + | chr3_1:83651638-83651657 | Msa0381470:intron | 25.0% |
!!! | ATAATTTTTAGGACTGTGAT+AGG | - | chr3_1:83651991-83652010 | None:intergenic | 25.0% |
!! | TTTGATTCTGCTTAATTTTC+AGG | - | chr3_1:83652016-83652035 | None:intergenic | 25.0% |
! | ATTAAGCAGAATCAAATGAA+TGG | + | chr3_1:83652020-83652039 | Msa0381470:intron | 25.0% |
!! | AACGCTTTCATATCATATTT+TGG | + | chr3_1:83652124-83652143 | Msa0381470:intron | 25.0% |
! | AACAATATTTCAGGAAAACT+TGG | - | chr3_1:83652607-83652626 | None:intergenic | 25.0% |
! | ATATATATATATATGCAGGG+TGG | + | chr3_1:83652628-83652647 | Msa0381470:intron | 25.0% |
!!! | TTTTGACCATTTTTCACATA+GGG | - | chr3_1:83652849-83652868 | None:intergenic | 25.0% |
!!! | ATTTTGACCATTTTTCACAT+AGG | - | chr3_1:83652850-83652869 | None:intergenic | 25.0% |
! | ATTGTGTACATATATTCGAA+AGG | + | chr3_1:83652891-83652910 | Msa0381470:three_prime_UTR | 25.0% |
! | AACATACAGAAGTAAAATAC+AGG | - | chr3_1:83652950-83652969 | None:intergenic | 25.0% |
!! | GTATTTTACTTCTGTATGTT+TGG | + | chr3_1:83652950-83652969 | Msa0381470:three_prime_UTR | 25.0% |
! | CAATCTGCATATAGCTATTT+TGG | - | chr3_1:83640353-83640372 | None:intergenic | 30.0% |
GCACAAAACAATGAAAAAAG+AGG | - | chr3_1:83640443-83640462 | None:intergenic | 30.0% | |
!!! | GTGTTTTTTGGAAATCCTAT+GGG | - | chr3_1:83640477-83640496 | None:intergenic | 30.0% |
!!! | TGTGTTTTTTGGAAATCCTA+TGG | - | chr3_1:83640478-83640497 | None:intergenic | 30.0% |
GGTAAAACGAAAACTTGAAA+AGG | - | chr3_1:83640721-83640740 | None:intergenic | 30.0% | |
GAATCAAGAAAACAGAGATA+GGG | - | chr3_1:83640742-83640761 | None:intergenic | 30.0% | |
TAAGATACTCATAACAGACA+AGG | - | chr3_1:83640764-83640783 | None:intergenic | 30.0% | |
! | AATTAAGCCTCCAATTTTCT+GGG | + | chr3_1:83641202-83641221 | Msa0381470:intron | 30.0% |
CTCAATTAATACACTTGGTT+TGG | + | chr3_1:83641228-83641247 | Msa0381470:intron | 30.0% | |
!!! | TTTAATTTTTTTGGCCCCTT+TGG | + | chr3_1:83641299-83641318 | Msa0381470:intron | 30.0% |
AAGAAGTTGAATTTATCCGT+AGG | + | chr3_1:83641370-83641389 | Msa0381470:intron | 30.0% | |
TGTATTATATTATTCAGGGG+TGG | + | chr3_1:83641499-83641518 | Msa0381470:intron | 30.0% | |
!!! | TTTTTGAAGCTCATACCTTA+AGG | - | chr3_1:83641561-83641580 | None:intergenic | 30.0% |
ACTATTGTTGTGACTTCTAT+TGG | + | chr3_1:83641586-83641605 | Msa0381470:intron | 30.0% | |
CTAAAACAAGACAATTGAAG+AGG | - | chr3_1:83641674-83641693 | None:intergenic | 30.0% | |
!!! | CTCTTCAATTGTCTTGTTTT+AGG | + | chr3_1:83641672-83641691 | Msa0381470:intron | 30.0% |
!! | TGTTTTAGGCCTATTAGAAT+AGG | + | chr3_1:83641686-83641705 | Msa0381470:intron | 30.0% |
!! | GTTTTAGGCCTATTAGAATA+GGG | + | chr3_1:83641687-83641706 | Msa0381470:intron | 30.0% |
!!! | TTAGGTTGATGTTTTTTGGA+TGG | + | chr3_1:83641727-83641746 | Msa0381470:intron | 30.0% |
GAAAAAACCGTGTATTATTG+TGG | + | chr3_1:83641984-83642003 | Msa0381470:intron | 30.0% | |
ATCAACTCCACAATAATACA+CGG | - | chr3_1:83641994-83642013 | None:intergenic | 30.0% | |
AATCACATCATAACAGATAG+GGG | + | chr3_1:83642049-83642068 | Msa0381470:intron | 30.0% | |
GCAAATTACAATTACGTACT+AGG | - | chr3_1:83642169-83642188 | None:intergenic | 30.0% | |
!!! | CGTCACTAGATTTGTTATTT+TGG | - | chr3_1:83642262-83642281 | None:intergenic | 30.0% |
TGTTGAGATCTTTATATTGG+AGG | - | chr3_1:83642622-83642641 | None:intergenic | 30.0% | |
AACTATTTATTAGGATGGTG+TGG | - | chr3_1:83642903-83642922 | None:intergenic | 30.0% | |
ATCCCAAATCTATAGTGATA+AGG | + | chr3_1:83642945-83642964 | Msa0381470:intron | 30.0% | |
CACCTTATCACTATAGATTT+GGG | - | chr3_1:83642950-83642969 | None:intergenic | 30.0% | |
TCACCTTATCACTATAGATT+TGG | - | chr3_1:83642951-83642970 | None:intergenic | 30.0% | |
GAATATTTGAACCCAAAGAT+TGG | + | chr3_1:83643103-83643122 | Msa0381470:intron | 30.0% | |
GATGAGATGATATCATTAAG+AGG | - | chr3_1:83643183-83643202 | None:intergenic | 30.0% | |
GGTTAATAAAGAACTTGGTA+AGG | - | chr3_1:83643205-83643224 | None:intergenic | 30.0% | |
! | TCGTTGGTTAATAAAGAACT+TGG | - | chr3_1:83643210-83643229 | None:intergenic | 30.0% |
! | CCAGAAATTTGTTTATTGTG+GGG | + | chr3_1:83643235-83643254 | Msa0381470:intron | 30.0% |
! | CAGAAATTTGTTTATTGTGG+GGG | + | chr3_1:83643236-83643255 | Msa0381470:intron | 30.0% |
! | ACGTTACACGTAAATTTTAC+TGG | + | chr3_1:83643373-83643392 | Msa0381470:intron | 30.0% |
!!! | TTTTTTGAGTAATGGTTAGG+AGG | - | chr3_1:83643637-83643656 | None:intergenic | 30.0% |
!!! | ATTTATTTTTTGGTGGTGGT+CGG | + | chr3_1:83643914-83643933 | Msa0381470:intron | 30.0% |
AACATAAAATATGCAAGGTC+CGG | - | chr3_1:83643950-83643969 | None:intergenic | 30.0% | |
! | AGAGATGGTGATGTTTAAAT+TGG | - | chr3_1:83644083-83644102 | None:intergenic | 30.0% |
! | AGGCAAATTTTGAATGAACT+AGG | - | chr3_1:83644106-83644125 | None:intergenic | 30.0% |
ACTTAGTTGCCAAACAATAT+GGG | + | chr3_1:83644174-83644193 | Msa0381470:intron | 30.0% | |
TTGTTTACTCCCATATTGTT+TGG | - | chr3_1:83644186-83644205 | None:intergenic | 30.0% | |
!! | GCTGCTTACTTTTGATATTT+TGG | - | chr3_1:83644584-83644603 | None:intergenic | 30.0% |
GTTTGACAGTTGCTTATATA+TGG | - | chr3_1:83644700-83644719 | None:intergenic | 30.0% | |
AAACCTTTAATTGTAGAGTG+CGG | + | chr3_1:83644829-83644848 | Msa0381470:intron | 30.0% | |
! | TTTTCCATTTATGCTTCAGA+AGG | - | chr3_1:83644944-83644963 | None:intergenic | 30.0% |
TGAAGCATAAATGGAAAAAC+AGG | + | chr3_1:83644946-83644965 | Msa0381470:intron | 30.0% | |
TCAGAAAACCATCAAAGTAA+AGG | + | chr3_1:83645040-83645059 | Msa0381470:intron | 30.0% | |
CAGAAAACCATCAAAGTAAA+GGG | + | chr3_1:83645041-83645060 | Msa0381470:intron | 30.0% | |
!! | ACAAAAAGTACCTTATCAGT+TGG | + | chr3_1:83645236-83645255 | Msa0381470:intron | 30.0% |
!! | CAAAAAGTACCTTATCAGTT+GGG | + | chr3_1:83645237-83645256 | Msa0381470:intron | 30.0% |
TTTCAGATCGAATTCATCAT+TGG | - | chr3_1:83645278-83645297 | None:intergenic | 30.0% | |
TCACTTCAGTTGTGTTTATA+TGG | - | chr3_1:83645639-83645658 | None:intergenic | 30.0% | |
GAGTTTCAAACGATTTAAGT+AGG | + | chr3_1:83645657-83645676 | Msa0381470:intron | 30.0% | |
CATGTGTAGTTCCAAAAATA+GGG | + | chr3_1:83645709-83645728 | Msa0381470:intron | 30.0% | |
!! | ATCGCCAATTTGTTAAGATA+TGG | + | chr3_1:83646041-83646060 | Msa0381470:intron | 30.0% |
TAGAGATTAAACATCTAACG+CGG | + | chr3_1:83646115-83646134 | Msa0381470:intron | 30.0% | |
TAAACCAATTGTGATGAAGA+AGG | + | chr3_1:83646203-83646222 | Msa0381470:intron | 30.0% | |
AAACCAATTGTGATGAAGAA+GGG | + | chr3_1:83646204-83646223 | Msa0381470:intron | 30.0% | |
!! | CACAACATAGATTTTTAGGA+AGG | + | chr3_1:83646259-83646278 | Msa0381470:intron | 30.0% |
!! | AACATAGATTTTTAGGAAGG+TGG | + | chr3_1:83646262-83646281 | Msa0381470:intron | 30.0% |
ATGTGTGAACAATTCAATCA+AGG | + | chr3_1:83646342-83646361 | Msa0381470:intron | 30.0% | |
ATATAGAGCACAAACAAGAT+GGG | - | chr3_1:83646420-83646439 | None:intergenic | 30.0% | |
!! | TTTTGATTAAGTATGTGTCG+TGG | - | chr3_1:83646505-83646524 | None:intergenic | 30.0% |
CGACACATACTTAATCAAAA+TGG | + | chr3_1:83646505-83646524 | Msa0381470:intron | 30.0% | |
AATAGAAGCAGTGATCAATA+TGG | + | chr3_1:83646590-83646609 | Msa0381470:intron | 30.0% | |
GGGATGCATAGTATTTAATT+TGG | - | chr3_1:83646722-83646741 | None:intergenic | 30.0% | |
AAAATCTGCTGCATATTATG+AGG | - | chr3_1:83646957-83646976 | None:intergenic | 30.0% | |
TATGATGACATGATTCTACT+GGG | - | chr3_1:83647040-83647059 | None:intergenic | 30.0% | |
ATATGATGACATGATTCTAC+TGG | - | chr3_1:83647041-83647060 | None:intergenic | 30.0% | |
! | TTGATCGATTTCATGTGAAT+TGG | - | chr3_1:83647195-83647214 | None:intergenic | 30.0% |
! | TTCTGTCACAATTTGACTTT+AGG | - | chr3_1:83647224-83647243 | None:intergenic | 30.0% |
TGCTTAAACACAAATTGTGA+AGG | - | chr3_1:83647416-83647435 | None:intergenic | 30.0% | |
CCATCAATTATTAAATGACG+CGG | - | chr3_1:83647468-83647487 | None:intergenic | 30.0% | |
ATGGGAAGTAATCTTTACAA+TGG | + | chr3_1:83647491-83647510 | Msa0381470:intron | 30.0% | |
! | TAAAGTACCTTCAACCAAAA+AGG | + | chr3_1:83647693-83647712 | Msa0381470:intron | 30.0% |
!!! | TTTTCATCCTTTTTGGTTGA+AGG | - | chr3_1:83647703-83647722 | None:intergenic | 30.0% |
! | GTCTGAATTTTCATCCTTTT+TGG | - | chr3_1:83647710-83647729 | None:intergenic | 30.0% |
AAACCAAGTATAGCAAATTG+GGG | - | chr3_1:83647764-83647783 | None:intergenic | 30.0% | |
CTAAACCAAGTATAGCAAAT+TGG | - | chr3_1:83647766-83647785 | None:intergenic | 30.0% | |
TATACTTGGTTTAGCAACAT+AGG | + | chr3_1:83647772-83647791 | Msa0381470:intron | 30.0% | |
ATATGTGCAAAAAACCAAAC+AGG | + | chr3_1:83647847-83647866 | Msa0381470:intron | 30.0% | |
!!! | ATTGTTTTTGTTGTCCTGTT+TGG | - | chr3_1:83647864-83647883 | None:intergenic | 30.0% |
TTGTATTCCTTTGTATTGTG+GGG | - | chr3_1:83647944-83647963 | None:intergenic | 30.0% | |
CTTTGTATTCCTTTGTATTG+TGG | - | chr3_1:83647946-83647965 | None:intergenic | 30.0% | |
CACAATACAAAGGAATACAA+AGG | + | chr3_1:83647944-83647963 | Msa0381470:intron | 30.0% | |
ATACAAAGGAATACAAAGGA+AGG | + | chr3_1:83647948-83647967 | Msa0381470:intron | 30.0% | |
! | TTTGGTTCAGTTATTAGTTG+GGG | - | chr3_1:83648081-83648100 | None:intergenic | 30.0% |
AAAAAGAACAGCAAAACAAC+CGG | + | chr3_1:83648142-83648161 | Msa0381470:intron | 30.0% | |
!! | TCTTCTTTTTGTTGTGAGAT+GGG | - | chr3_1:83648169-83648188 | None:intergenic | 30.0% |
!! | ATCTTCTTTTTGTTGTGAGA+TGG | - | chr3_1:83648170-83648189 | None:intergenic | 30.0% |
ATTGAAGGAACCTGAATTAT+CGG | + | chr3_1:83648735-83648754 | Msa0381470:intron | 30.0% | |
AAGATGATAGCAATTTCGAT+TGG | - | chr3_1:83648768-83648787 | None:intergenic | 30.0% | |
CTGAAAGAATAAAGGAACAA+TGG | + | chr3_1:83648952-83648971 | Msa0381470:intron | 30.0% | |
AGAATAAAGGAACAATGGAA+AGG | + | chr3_1:83648957-83648976 | Msa0381470:intron | 30.0% | |
!! | AAAGAGTAAATTTTAGCCCT+AGG | + | chr3_1:83649053-83649072 | Msa0381470:intron | 30.0% |
!! | AAGAGTAAATTTTAGCCCTA+GGG | + | chr3_1:83649054-83649073 | Msa0381470:intron | 30.0% |
!! | CTAATTTTAACCTAAACCCT+AGG | - | chr3_1:83649073-83649092 | None:intergenic | 30.0% |
! | CTAGGGTTTAGGTTAAAATT+AGG | + | chr3_1:83649071-83649090 | Msa0381470:intron | 30.0% |
! | TTAGGGCAAAAATTTGCTTA+TGG | + | chr3_1:83649089-83649108 | Msa0381470:intron | 30.0% |
! | TAGGGCAAAAATTTGCTTAT+GGG | + | chr3_1:83649090-83649109 | Msa0381470:intron | 30.0% |
!! | TATAGATTGTATCGGTTACA+CGG | + | chr3_1:83649125-83649144 | Msa0381470:intron | 30.0% |
TCAATCAAATCATGTTAGCT+AGG | - | chr3_1:83649294-83649313 | None:intergenic | 30.0% | |
AAAGCATACAGAAAGGAAAA+TGG | + | chr3_1:83649399-83649418 | Msa0381470:CDS | 30.0% | |
AAGCATACAGAAAGGAAAAT+GGG | + | chr3_1:83649400-83649419 | Msa0381470:CDS | 30.0% | |
TCAACAAATTGATCAATGGA+AGG | - | chr3_1:83649501-83649520 | None:intergenic | 30.0% | |
TATATGAGGAATGTGTATTC+AGG | - | chr3_1:83649769-83649788 | None:intergenic | 30.0% | |
AGCGTTTATTAACACCAATT+TGG | + | chr3_1:83649880-83649899 | Msa0381470:intron | 30.0% | |
AGTTAACAAACCATCCAAAT+TGG | - | chr3_1:83649897-83649916 | None:intergenic | 30.0% | |
TCTTCCACATACAAATTAAG+TGG | - | chr3_1:83649938-83649957 | None:intergenic | 30.0% | |
!! | ACTTAATTTGTATGTGGAAG+AGG | + | chr3_1:83649937-83649956 | Msa0381470:CDS | 30.0% |
!!! | AACTAATGCCTAGTTTTACT+TGG | + | chr3_1:83650065-83650084 | Msa0381470:intron | 30.0% |
CAGCGAGTTAAATGAAATTA+TGG | + | chr3_1:83650104-83650123 | Msa0381470:intron | 30.0% | |
AACTAATACTAACATGACAC+TGG | + | chr3_1:83650280-83650299 | Msa0381470:intron | 30.0% | |
AACTAATACTAACATGACAC+TGG | + | chr3_1:83650280-83650299 | Msa0381470:intron | 30.0% | |
TGAATCAAGGTATAACACAT+CGG | - | chr3_1:83650506-83650525 | None:intergenic | 30.0% | |
AAACAGTAAGAAAAATCTGG+AGG | + | chr3_1:83650525-83650544 | Msa0381470:CDS | 30.0% | |
CTATCTGTTATATTTGCAAC+TGG | + | chr3_1:83650960-83650979 | Msa0381470:intron | 30.0% | |
ATTGAAATTGCCAGTGATTT+GGG | + | chr3_1:83651078-83651097 | Msa0381470:CDS | 30.0% | |
!!! | TGGTAACTTTAGCTCTTTTT+TGG | + | chr3_1:83652040-83652059 | Msa0381470:intron | 30.0% |
! | GGACTTTTCTAATAATTCTG+TGG | - | chr3_1:83652077-83652096 | None:intergenic | 30.0% |
!! | AAGTGGGTTAATGTTATGTT+AGG | - | chr3_1:83652098-83652117 | None:intergenic | 30.0% |
!! | ACCATTTTAGGAATACAAAC+AGG | + | chr3_1:83652695-83652714 | Msa0381470:CDS | 30.0% |
ACCTGTTTGTATTCCTAAAA+TGG | - | chr3_1:83652699-83652718 | None:intergenic | 30.0% | |
! | AGGTAGTATTGAAGATAAGA+AGG | + | chr3_1:83652715-83652734 | Msa0381470:CDS | 30.0% |
! | GGTAGTATTGAAGATAAGAA+GGG | + | chr3_1:83652716-83652735 | Msa0381470:CDS | 30.0% |
AAGTAAAATACAGGTGAAGA+AGG | - | chr3_1:83652941-83652960 | None:intergenic | 30.0% | |
TATTAGGAGAAGCAATGACA+AGG | - | chr3_1:83640398-83640417 | None:intergenic | 35.0% | |
!!! | GGTGATTGTGTTGTGTTTTT+TGG | - | chr3_1:83640489-83640508 | None:intergenic | 35.0% |
CAGTGAACTTTCCAAGTTTA+AGG | + | chr3_1:83640573-83640592 | Msa0381470:CDS | 35.0% | |
AGAAGCAGTTTCCTTAAACT+TGG | - | chr3_1:83640587-83640606 | None:intergenic | 35.0% | |
AAGTAAAACGTTGATCACCT+TGG | - | chr3_1:83640633-83640652 | None:intergenic | 35.0% | |
GGAATCAAGAAAACAGAGAT+AGG | - | chr3_1:83640743-83640762 | None:intergenic | 35.0% | |
TATAGAGTGAAGGCCTATAT+TGG | - | chr3_1:83641116-83641135 | None:intergenic | 35.0% | |
! | GAATTAAGCCTCCAATTTTC+TGG | + | chr3_1:83641201-83641220 | Msa0381470:intron | 35.0% |
! | ATTAAGCCTCCAATTTTCTG+GGG | + | chr3_1:83641203-83641222 | Msa0381470:intron | 35.0% |
!! | ATTAGTACTAATTGGGTTGG+AGG | - | chr3_1:83641433-83641452 | None:intergenic | 35.0% |
TTGAAGAGGAAAGTGAAAAC+CGG | - | chr3_1:83641660-83641679 | None:intergenic | 35.0% | |
CAAGAAGACCCTATTCTAAT+AGG | - | chr3_1:83641698-83641717 | None:intergenic | 35.0% | |
!!! | GGTGTTAGGTTGATGTTTTT+TGG | + | chr3_1:83641723-83641742 | Msa0381470:intron | 35.0% |
AAATCACTACGGTATACATG+AGG | - | chr3_1:83641765-83641784 | None:intergenic | 35.0% | |
CAAGGTGTGTCTTATATATG+CGG | - | chr3_1:83641803-83641822 | None:intergenic | 35.0% | |
TACGTTACAAAATGTAGTGC+TGG | + | chr3_1:83642347-83642366 | Msa0381470:CDS | 35.0% | |
ATCATACCTGGCCATAATTT+AGG | - | chr3_1:83642439-83642458 | None:intergenic | 35.0% | |
TTGACATTAGTCATCATACC+TGG | - | chr3_1:83642451-83642470 | None:intergenic | 35.0% | |
TTTGTATTCATCTACAGCTG+TGG | - | chr3_1:83642546-83642565 | None:intergenic | 35.0% | |
! | GGCTATCTTTATCGTTCTTT+TGG | - | chr3_1:83642601-83642620 | None:intergenic | 35.0% |
TATATAATCACTTGACCAGG+TGG | + | chr3_1:83642666-83642685 | Msa0381470:intron | 35.0% | |
!! | GGGACTGACTTTAGTATTTT+AGG | - | chr3_1:83642745-83642764 | None:intergenic | 35.0% |
AGAAACACTCCTTCTATTGA+TGG | + | chr3_1:83642854-83642873 | Msa0381470:intron | 35.0% | |
GAAACACTCCTTCTATTGAT+GGG | + | chr3_1:83642855-83642874 | Msa0381470:intron | 35.0% | |
AAACACTCCTTCTATTGATG+GGG | + | chr3_1:83642856-83642875 | Msa0381470:intron | 35.0% | |
!! | CAAATTTCTGGAATCATCGT+TGG | - | chr3_1:83643226-83643245 | None:intergenic | 35.0% |
CCCCACAATAAACAAATTTC+TGG | - | chr3_1:83643238-83643257 | None:intergenic | 35.0% | |
AGACGATAGAACTTCCATAT+TGG | + | chr3_1:83643463-83643482 | Msa0381470:intron | 35.0% | |
CGATTGTTCTTGATCCAATA+TGG | - | chr3_1:83643480-83643499 | None:intergenic | 35.0% | |
! | TTTTGAGCGATATAAGTGTG+AGG | - | chr3_1:83643561-83643580 | None:intergenic | 35.0% |
!!! | TTTATTTTTTGGTGGTGGTC+GGG | + | chr3_1:83643915-83643934 | Msa0381470:intron | 35.0% |
ACATAAAATATGCAAGGTCC+GGG | - | chr3_1:83643949-83643968 | None:intergenic | 35.0% | |
GTGAGCTAACTTAATTGGTA+GGG | - | chr3_1:83643980-83643999 | None:intergenic | 35.0% | |
! | ATGGTGATGTTTAAATTGGC+GGG | - | chr3_1:83644079-83644098 | None:intergenic | 35.0% |
! | GATGGTGATGTTTAAATTGG+CGG | - | chr3_1:83644080-83644099 | None:intergenic | 35.0% |
TTTGAATGAACTAGGAGAGA+TGG | - | chr3_1:83644098-83644117 | None:intergenic | 35.0% | |
! | GGGAAATGTAGAGTTACTTT+AGG | - | chr3_1:83644126-83644145 | None:intergenic | 35.0% |
GACTTAGTTGCCAAACAATA+TGG | + | chr3_1:83644173-83644192 | Msa0381470:intron | 35.0% | |
ACAGTCAACAATTAGAACCA+AGG | + | chr3_1:83644436-83644455 | Msa0381470:intron | 35.0% | |
CAGTCAACAATTAGAACCAA+GGG | + | chr3_1:83644437-83644456 | Msa0381470:intron | 35.0% | |
ATTTCATTATCTGCTTCCCT+TGG | - | chr3_1:83644456-83644475 | None:intergenic | 35.0% | |
!! | CTTTTGATATTTTGGATGGC+TGG | - | chr3_1:83644576-83644595 | None:intergenic | 35.0% |
! | TGCTTGAGAAATAAGAGCAT+CGG | + | chr3_1:83644618-83644637 | Msa0381470:intron | 35.0% |
AAATTGGCTGCTACAAAAGA+TGG | - | chr3_1:83644767-83644786 | None:intergenic | 35.0% | |
AAACCGCACTCTACAATTAA+AGG | - | chr3_1:83644835-83644854 | None:intergenic | 35.0% | |
!!! | ATCCCAAGTCACCTTTTTTA+CGG | + | chr3_1:83645009-83645028 | Msa0381470:intron | 35.0% |
ATCCGTAAAAAAGGTGACTT+GGG | - | chr3_1:83645014-83645033 | None:intergenic | 35.0% | |
AATCCGTAAAAAAGGTGACT+TGG | - | chr3_1:83645015-83645034 | None:intergenic | 35.0% | |
!!! | GTCACCTTTTTTACGGATTA+TGG | + | chr3_1:83645016-83645035 | Msa0381470:intron | 35.0% |
TGAGCCATAATCCGTAAAAA+AGG | - | chr3_1:83645023-83645042 | None:intergenic | 35.0% | |
AAAACCATCAAAGTAAAGGG+AGG | + | chr3_1:83645044-83645063 | Msa0381470:intron | 35.0% | |
TATACCTCCCTTTACTTTGA+TGG | - | chr3_1:83645051-83645070 | None:intergenic | 35.0% | |
GCATATCAGGAGGAAATTAA+AGG | - | chr3_1:83645108-83645127 | None:intergenic | 35.0% | |
! | AATGAGATTGAAGGCATATC+AGG | - | chr3_1:83645121-83645140 | None:intergenic | 35.0% |
! | ATACGAACAATGTTTTGTGC+AGG | - | chr3_1:83645547-83645566 | None:intergenic | 35.0% |
!!! | CCTATTTTTGGAACTACACA+TGG | - | chr3_1:83645711-83645730 | None:intergenic | 35.0% |
CCATGTGTAGTTCCAAAAAT+AGG | + | chr3_1:83645708-83645727 | Msa0381470:intron | 35.0% | |
! | AAAAATAGGGTCTGAAGCTT+CGG | + | chr3_1:83645722-83645741 | Msa0381470:intron | 35.0% |
AGCATAATAGGTCTTTCCAA+AGG | + | chr3_1:83645747-83645766 | Msa0381470:intron | 35.0% | |
! | AGAGATGATCTGGAATTGTT+GGG | + | chr3_1:83645874-83645893 | Msa0381470:intron | 35.0% |
AACCAATTGTGATGAAGAAG+GGG | + | chr3_1:83646205-83646224 | Msa0381470:intron | 35.0% | |
TCTGAAAAAGCAATCTGTTC+AGG | - | chr3_1:83646296-83646315 | None:intergenic | 35.0% | |
GATATAGAGCACAAACAAGA+TGG | - | chr3_1:83646421-83646440 | None:intergenic | 35.0% | |
TTTAGTGGTCAAGTGTTTAG+TGG | - | chr3_1:83646445-83646464 | None:intergenic | 35.0% | |
! | TTGGTGTTCTTTGTGTTTAG+TGG | - | chr3_1:83646460-83646479 | None:intergenic | 35.0% |
!! | CTGCATTTGTGTTTTTCAGT+TGG | - | chr3_1:83646479-83646498 | None:intergenic | 35.0% |
GCATTTGGATCACATTTGAT+TGG | - | chr3_1:83646697-83646716 | None:intergenic | 35.0% | |
CGATAACAATGAGAACTTGA+GGG | - | chr3_1:83646859-83646878 | None:intergenic | 35.0% | |
TCGATAACAATGAGAACTTG+AGG | - | chr3_1:83646860-83646879 | None:intergenic | 35.0% | |
CCGCGTCATTTAATAATTGA+TGG | + | chr3_1:83647465-83647484 | Msa0381470:intron | 35.0% | |
! | TTTTGCAGGATTCAATTGCA+AGG | - | chr3_1:83647539-83647558 | None:intergenic | 35.0% |
!! | TAACCCCAATTTGCTATACT+TGG | + | chr3_1:83647758-83647777 | Msa0381470:intron | 35.0% |
GCGTGTTAGCATATCATATT+TGG | - | chr3_1:83647896-83647915 | None:intergenic | 35.0% | |
!! | TTTCTTAGAGCTTTCTGGTT+TGG | - | chr3_1:83648030-83648049 | None:intergenic | 35.0% |
! | TGAGTTTTCTTAGAGCTTTC+TGG | - | chr3_1:83648035-83648054 | None:intergenic | 35.0% |
! | GGTCTTTGGTATCTGATTTT+TGG | - | chr3_1:83648099-83648118 | None:intergenic | 35.0% |
TATGTGTTTCGCTTAGTTCA+GGG | - | chr3_1:83648123-83648142 | None:intergenic | 35.0% | |
TTATGTGTTTCGCTTAGTTC+AGG | - | chr3_1:83648124-83648143 | None:intergenic | 35.0% | |
!!! | TTTTTGGAGTTTTTTGGTGC+AGG | - | chr3_1:83648254-83648273 | None:intergenic | 35.0% |
!!! | GGCTTCTTTTTGGAGTTTTT+TGG | - | chr3_1:83648260-83648279 | None:intergenic | 35.0% |
!!! | TGTGGTTTTTGGCTTCTTTT+TGG | - | chr3_1:83648270-83648289 | None:intergenic | 35.0% |
TTCAATTGCAATTTCCTTCG+TGG | - | chr3_1:83648307-83648326 | None:intergenic | 35.0% | |
AATGGTACTTGAATCCAAGA+CGG | - | chr3_1:83648379-83648398 | None:intergenic | 35.0% | |
AGGAAGTGAAGAGAGAATAT+GGG | + | chr3_1:83648899-83648918 | Msa0381470:intron | 35.0% | |
AAGGAACAATGGAAAGGAAT+AGG | + | chr3_1:83648963-83648982 | Msa0381470:intron | 35.0% | |
ACAATGGAAAGGAATAGGTT+TGG | + | chr3_1:83648968-83648987 | Msa0381470:intron | 35.0% | |
!! | AAATTTTAGCCCTAGGGTTT+AGG | + | chr3_1:83649060-83649079 | Msa0381470:intron | 35.0% |
! | GAATTGCATTTTCTTCTGGA+CGG | - | chr3_1:83649440-83649459 | None:intergenic | 35.0% |
! | ATGCGAATTGCATTTTCTTC+TGG | - | chr3_1:83649444-83649463 | None:intergenic | 35.0% |
AATGCAATTCGCATGAAGAT+TGG | + | chr3_1:83649450-83649469 | Msa0381470:CDS | 35.0% | |
GGCATCAACAAATTGATCAA+TGG | - | chr3_1:83649505-83649524 | None:intergenic | 35.0% | |
AACCATTTCCAATTATGCAC+CGG | + | chr3_1:83650000-83650019 | Msa0381470:CDS | 35.0% | |
! | GTGAAGATTTGAAATGGTAC+CGG | - | chr3_1:83650022-83650041 | None:intergenic | 35.0% |
ATCATGCACCAAGTAAAACT+AGG | - | chr3_1:83650076-83650095 | None:intergenic | 35.0% | |
!!! | AGTTTTACTTGGTGCATGAT+TGG | + | chr3_1:83650076-83650095 | Msa0381470:intron | 35.0% |
TGCACTTATAAGTGCATGAT+TGG | - | chr3_1:83650228-83650247 | None:intergenic | 35.0% | |
GTGTAATGTGATTCAGCATT+AGG | - | chr3_1:83650392-83650411 | None:intergenic | 35.0% | |
TTGTTACACTAGAAAGCAGA+AGG | + | chr3_1:83650839-83650858 | Msa0381470:intron | 35.0% | |
ATCAATGGAACCATACTTTC+CGG | + | chr3_1:83651036-83651055 | Msa0381470:CDS | 35.0% | |
!!! | GACACTTTTTCTTGTGATTC+CGG | - | chr3_1:83651058-83651077 | None:intergenic | 35.0% |
CATTGAAATTGCCAGTGATT+TGG | + | chr3_1:83651077-83651096 | Msa0381470:CDS | 35.0% | |
CCACAAAGATGAAACGATTA+TGG | - | chr3_1:83651122-83651141 | None:intergenic | 35.0% | |
CCATAATCGTTTCATCTTTG+TGG | + | chr3_1:83651119-83651138 | Msa0381470:intron | 35.0% | |
!!! | TTCTGCATTTTGTTGCTTTC+TGG | + | chr3_1:83651172-83651191 | Msa0381470:intron | 35.0% |
AAGCAAACTAAGTGTCCTAT+CGG | - | chr3_1:83651824-83651843 | None:intergenic | 35.0% | |
! | AGGTGTCTATCATTAAGTTG+CGG | - | chr3_1:83651971-83651990 | None:intergenic | 35.0% |
!! | TGAAAGCGTTGCAAAAAAGT+GGG | - | chr3_1:83652114-83652133 | None:intergenic | 35.0% |
!! | ATGAAAGCGTTGCAAAAAAG+TGG | - | chr3_1:83652115-83652134 | None:intergenic | 35.0% |
GTATCACATACCAGAATAGA+AGG | + | chr3_1:83652311-83652330 | Msa0381470:CDS | 35.0% | |
CATCACTTTACCTTCTATTC+TGG | - | chr3_1:83652324-83652343 | None:intergenic | 35.0% | |
CAGAATAGAAGGTAAAGTGA+TGG | + | chr3_1:83652322-83652341 | Msa0381470:intron | 35.0% | |
!! | TAGAAGGTAAAGTGATGGAT+TGG | + | chr3_1:83652327-83652346 | Msa0381470:intron | 35.0% |
CAAAACACTAGTAATATCCC+CGG | + | chr3_1:83652566-83652585 | Msa0381470:intron | 35.0% | |
GTATTGAAGATAAGAAGGGA+TGG | + | chr3_1:83652720-83652739 | Msa0381470:CDS | 35.0% | |
ATGCTACCCTATGTGAAAAA+TGG | + | chr3_1:83652840-83652859 | Msa0381470:three_prime_UTR | 35.0% | |
!! | ATATATTCGAAAGGCACCAA+GGG | + | chr3_1:83652900-83652919 | Msa0381470:three_prime_UTR | 35.0% |
! | TACTTCTGTATGTTTGGGTT+CGG | + | chr3_1:83652956-83652975 | Msa0381470:three_prime_UTR | 35.0% |
CTATATGCAGATTGCATAGC+TGG | + | chr3_1:83640359-83640378 | Msa0381470:five_prime_UTR | 40.0% | |
!! | CACTGTTTTGAACAACCAGA+AGG | + | chr3_1:83640527-83640546 | Msa0381470:five_prime_UTR | 40.0% |
! | ATCATTTTGCTCGATCCTTC+TGG | - | chr3_1:83640545-83640564 | None:intergenic | 40.0% |
TAAAACGTTGATCACCTTGG+AGG | - | chr3_1:83640630-83640649 | None:intergenic | 40.0% | |
! | TTAAGCCTCCAATTTTCTGG+GGG | + | chr3_1:83641204-83641223 | Msa0381470:intron | 40.0% |
AATTGAGTCCCCCAGAAAAT+TGG | - | chr3_1:83641215-83641234 | None:intergenic | 40.0% | |
GGGGACTCAATTAATACACT+TGG | + | chr3_1:83641223-83641242 | Msa0381470:intron | 40.0% | |
!! | TACTAATTGGGTTGGAGGAA+TGG | - | chr3_1:83641428-83641447 | None:intergenic | 40.0% |
TATTATTCAGGGGTGGATCT+TGG | + | chr3_1:83641506-83641525 | Msa0381470:intron | 40.0% | |
ATTATTCAGGGGTGGATCTT+GGG | + | chr3_1:83641507-83641526 | Msa0381470:intron | 40.0% | |
TTGAAGCTCATACCTTAAGG+AGG | - | chr3_1:83641558-83641577 | None:intergenic | 40.0% | |
!!! | GGTTTTTGGTAGTTATGTGC+CGG | + | chr3_1:83641638-83641657 | Msa0381470:intron | 40.0% |
! | GAATAGGGTCTTCTTGCTTT+TGG | + | chr3_1:83641702-83641721 | Msa0381470:intron | 40.0% |
!!! | GTCTTCTTGCTTTTGGTGTT+AGG | + | chr3_1:83641709-83641728 | Msa0381470:intron | 40.0% |
!!! | GGTTGATGTTTTTTGGATGG+TGG | + | chr3_1:83641730-83641749 | Msa0381470:intron | 40.0% |
!!! | GTTTTTTGGATGGTGGTTTG+AGG | + | chr3_1:83641737-83641756 | Msa0381470:intron | 40.0% |
! | ACCGTAGTGATTTTCACCTT+TGG | + | chr3_1:83641772-83641791 | Msa0381470:intron | 40.0% |
CCCAAAGGTGAAAATCACTA+CGG | - | chr3_1:83641776-83641795 | None:intergenic | 40.0% | |
! | CCGTAGTGATTTTCACCTTT+GGG | + | chr3_1:83641773-83641792 | Msa0381470:intron | 40.0% |
TATATATGCGGTACACCCAA+AGG | - | chr3_1:83641791-83641810 | None:intergenic | 40.0% | |
TAACAGATAGGGGCTTACAA+TGG | + | chr3_1:83642059-83642078 | Msa0381470:intron | 40.0% | |
ATGAGTACGCTAATGTGGAT+TGG | + | chr3_1:83642285-83642304 | Msa0381470:CDS | 40.0% | |
TGAGTACGCTAATGTGGATT+GGG | + | chr3_1:83642286-83642305 | Msa0381470:CDS | 40.0% | |
GTAACGTACATGAAATCGGT+TGG | - | chr3_1:83642335-83642354 | None:intergenic | 40.0% | |
!!! | TGTAGTGCTGGCCAAAATTT+TGG | + | chr3_1:83642359-83642378 | Msa0381470:CDS | 40.0% |
! | GCTGTCCATGTCCAAAATTT+TGG | - | chr3_1:83642373-83642392 | None:intergenic | 40.0% |
TTGGACATGGACAGCTTAAT+CGG | + | chr3_1:83642378-83642397 | Msa0381470:CDS | 40.0% | |
ATGGACAGCTTAATCGGTAT+GGG | + | chr3_1:83642384-83642403 | Msa0381470:CDS | 40.0% | |
ACAGCTGTGGATAACATTGA+TGG | - | chr3_1:83642533-83642552 | None:intergenic | 40.0% | |
CTCAACATGTGTACAAGTGA+TGG | + | chr3_1:83642635-83642654 | Msa0381470:intron | 40.0% | |
ACTGTGTTGCCAAATCATGA+GGG | + | chr3_1:83643439-83643458 | Msa0381470:intron | 40.0% | |
!!! | TTATTTTTTGGTGGTGGTCG+GGG | + | chr3_1:83643916-83643935 | Msa0381470:intron | 40.0% |
CATAAAATATGCAAGGTCCG+GGG | - | chr3_1:83643948-83643967 | None:intergenic | 40.0% | |
CGTGAGCTAACTTAATTGGT+AGG | - | chr3_1:83643981-83644000 | None:intergenic | 40.0% | |
ACCAATTAAGTTAGCTCACG+AGG | + | chr3_1:83643981-83644000 | Msa0381470:intron | 40.0% | |
TCCTCGTGAGCTAACTTAAT+TGG | - | chr3_1:83643985-83644004 | None:intergenic | 40.0% | |
! | TGGTGATGTTTAAATTGGCG+GGG | - | chr3_1:83644078-83644097 | None:intergenic | 40.0% |
TAACTCTACATTTCCCACTG+AGG | + | chr3_1:83644130-83644149 | Msa0381470:intron | 40.0% | |
AGCATAAGGAGTAGCACAAA+AGG | + | chr3_1:83644538-83644557 | Msa0381470:intron | 40.0% | |
CGGTTTATCTTATCCCAGTT+AGG | + | chr3_1:83644849-83644868 | Msa0381470:intron | 40.0% | |
CCATTCCAGTCAGATTCTAA+CGG | + | chr3_1:83644906-83644925 | Msa0381470:intron | 40.0% | |
CATTCCAGTCAGATTCTAAC+GGG | + | chr3_1:83644907-83644926 | Msa0381470:intron | 40.0% | |
ATTCCAGTCAGATTCTAACG+GGG | + | chr3_1:83644908-83644927 | Msa0381470:intron | 40.0% | |
!! | GCAACCTTCTGAAGCATAAA+TGG | + | chr3_1:83644937-83644956 | Msa0381470:intron | 40.0% |
! | GTAAAGGGAGGTATAGTTTC+TGG | + | chr3_1:83645056-83645075 | Msa0381470:intron | 40.0% |
AAGTACCTTATCAGTTGGGA+TGG | + | chr3_1:83645241-83645260 | Msa0381470:intron | 40.0% | |
AGTACCTTATCAGTTGGGAT+GGG | + | chr3_1:83645242-83645261 | Msa0381470:intron | 40.0% | |
AAAACCCATCCCAACTGATA+AGG | - | chr3_1:83645249-83645268 | None:intergenic | 40.0% | |
! | ACATTTTCAGATAGCAGAGC+AGG | + | chr3_1:83645434-83645453 | Msa0381470:intron | 40.0% |
TACACATGGAACAAAAGCTC+TGG | - | chr3_1:83645697-83645716 | None:intergenic | 40.0% | |
! | GAAGCTTCAGACCCTATTTT+TGG | - | chr3_1:83645723-83645742 | None:intergenic | 40.0% |
! | AAAATAGGGTCTGAAGCTTC+GGG | + | chr3_1:83645723-83645742 | Msa0381470:intron | 40.0% |
!! | TGTAAAAGGTGCTACACCTT+TGG | - | chr3_1:83645766-83645785 | None:intergenic | 40.0% |
! | GTGTAGCACCTTTTACAACA+GGG | + | chr3_1:83645769-83645788 | Msa0381470:intron | 40.0% |
TCCAATAATTCACTCGCTGA+AGG | + | chr3_1:83645795-83645814 | Msa0381470:intron | 40.0% | |
CCAATAATTCACTCGCTGAA+GGG | + | chr3_1:83645796-83645815 | Msa0381470:intron | 40.0% | |
CCAGATCATCTCTCAAATGA+AGG | - | chr3_1:83645867-83645886 | None:intergenic | 40.0% | |
CCTTCATTTGAGAGATGATC+TGG | + | chr3_1:83645864-83645883 | Msa0381470:intron | 40.0% | |
! | GAGAGATGATCTGGAATTGT+TGG | + | chr3_1:83645873-83645892 | Msa0381470:intron | 40.0% |
GCTGCTGCCATGTTAAAAAT+TGG | - | chr3_1:83645916-83645935 | None:intergenic | 40.0% | |
AGATGGGATTGAATTCAACC+AGG | - | chr3_1:83646404-83646423 | None:intergenic | 40.0% | |
! | CTGCTTCTATTTGCTACTTC+TGG | - | chr3_1:83646581-83646600 | None:intergenic | 40.0% |
GCTCATTGATGTATGAACTG+TGG | + | chr3_1:83646635-83646654 | Msa0381470:intron | 40.0% | |
TGTGGCAAATGAGAAGTAAG+TGG | + | chr3_1:83646653-83646672 | Msa0381470:intron | 40.0% | |
AAGTTCTCATCCTGCCAATT+TGG | + | chr3_1:83646915-83646934 | Msa0381470:intron | 40.0% | |
GAAGGCTACACATTCCAAAT+TGG | - | chr3_1:83646932-83646951 | None:intergenic | 40.0% | |
! | CGCGGATTATACAAAGAACA+GGG | - | chr3_1:83647450-83647469 | None:intergenic | 40.0% |
! | ACGCGGATTATACAAAGAAC+AGG | - | chr3_1:83647451-83647470 | None:intergenic | 40.0% |
TATTCCTTTGTATTGTGGGG+AGG | - | chr3_1:83647941-83647960 | None:intergenic | 40.0% | |
!! | CTTTCTGGTTTGGCAATTTG+GGG | - | chr3_1:83648020-83648039 | None:intergenic | 40.0% |
!! | GCTTTCTGGTTTGGCAATTT+GGG | - | chr3_1:83648021-83648040 | None:intergenic | 40.0% |
!! | AGCTTTCTGGTTTGGCAATT+TGG | - | chr3_1:83648022-83648041 | None:intergenic | 40.0% |
!! | TTTTTGTTGTGAGATGGGAC+CGG | - | chr3_1:83648164-83648183 | None:intergenic | 40.0% |
!! | GTTGTTTCGTGGCTTTTATC+AGG | - | chr3_1:83648206-83648225 | None:intergenic | 40.0% |
! | TGTGGTAGAAAGTTGTTTCG+TGG | - | chr3_1:83648217-83648236 | None:intergenic | 40.0% |
GCCAAAAACCACAACTCAAA+CGG | + | chr3_1:83648277-83648296 | Msa0381470:intron | 40.0% | |
CCAAAAACCACAACTCAAAC+GGG | + | chr3_1:83648278-83648297 | Msa0381470:intron | 40.0% | |
! | TTGAATCCAAGACGGTGTTT+TGG | - | chr3_1:83648371-83648390 | None:intergenic | 40.0% |
GAAATTGCTATCATCTTCGC+CGG | + | chr3_1:83648771-83648790 | Msa0381470:intron | 40.0% | |
CAGGAAGTGAAGAGAGAATA+TGG | + | chr3_1:83648898-83648917 | Msa0381470:intron | 40.0% | |
AGTGAAGAGAGAATATGGGA+TGG | + | chr3_1:83648903-83648922 | Msa0381470:intron | 40.0% | |
GAGAATATGGGATGGATAGA+TGG | + | chr3_1:83648911-83648930 | Msa0381470:intron | 40.0% | |
ATGGAAAGGAATAGGTTTGG+AGG | + | chr3_1:83648971-83648990 | Msa0381470:intron | 40.0% | |
TTGGTTTAGGAACGATGGAA+AGG | + | chr3_1:83649012-83649031 | Msa0381470:intron | 40.0% | |
TAGGAACGATGGAAAGGAAT+AGG | + | chr3_1:83649018-83649037 | Msa0381470:intron | 40.0% | |
AGGAACGATGGAAAGGAATA+GGG | + | chr3_1:83649019-83649038 | Msa0381470:intron | 40.0% | |
ATGGAAAGGAATAGGGCAAT+AGG | + | chr3_1:83649026-83649045 | Msa0381470:intron | 40.0% | |
TGGAAAGGAATAGGGCAATA+GGG | + | chr3_1:83649027-83649046 | Msa0381470:intron | 40.0% | |
TAATGTATAGGTTCCTCCAC+CGG | + | chr3_1:83649675-83649694 | Msa0381470:intron | 40.0% | |
CTTGAAATAGTTGCGAACAG+GGG | - | chr3_1:83649797-83649816 | None:intergenic | 40.0% | |
CCTTGAAATAGTTGCGAACA+GGG | - | chr3_1:83649798-83649817 | None:intergenic | 40.0% | |
ACCTTGAAATAGTTGCGAAC+AGG | - | chr3_1:83649799-83649818 | None:intergenic | 40.0% | |
!!! | TTGTTTTTGCACATTGCAGC+TGG | + | chr3_1:83649857-83649876 | Msa0381470:intron | 40.0% |
!! | GGATGGTTTGTTAACTTGAC+AGG | + | chr3_1:83649901-83649920 | Msa0381470:intron | 40.0% |
!! | GGTTTGTTAACTTGACAGGA+AGG | + | chr3_1:83649905-83649924 | Msa0381470:intron | 40.0% |
CACATACAAATTAAGTGGCG+CGG | - | chr3_1:83649933-83649952 | None:intergenic | 40.0% | |
TACCGGTGCATAATTGGAAA+TGG | - | chr3_1:83650005-83650024 | None:intergenic | 40.0% | |
!! | AAATGGTACCGGTGCATAAT+TGG | - | chr3_1:83650011-83650030 | None:intergenic | 40.0% |
AAGTGCATGATTGGATAGAC+AGG | - | chr3_1:83650219-83650238 | None:intergenic | 40.0% | |
TGCTATGCTATTGAGTGCTA+CGG | - | chr3_1:83650423-83650442 | None:intergenic | 40.0% | |
CACTAATTGCCTTGACATGT+AGG | + | chr3_1:83650441-83650460 | Msa0381470:intron | 40.0% | |
CAGTAAGAAAAATCTGGAGG+AGG | + | chr3_1:83650528-83650547 | Msa0381470:CDS | 40.0% | |
CAAGCTGACATGAGTATACA+TGG | + | chr3_1:83650716-83650735 | Msa0381470:intron | 40.0% | |
! | TGCAACTGGTCTATCTAACT+TGG | + | chr3_1:83650974-83650993 | Msa0381470:intron | 40.0% |
! | GGAAAGTATGGTTCCATTGA+TGG | - | chr3_1:83651037-83651056 | None:intergenic | 40.0% |
TCTTGTGATTCCGGAAAGTA+TGG | - | chr3_1:83651049-83651068 | None:intergenic | 40.0% | |
TACCTGATAACCCAAATCAC+TGG | - | chr3_1:83651091-83651110 | None:intergenic | 40.0% | |
TATGAGTTCAGAACACCGAT+AGG | + | chr3_1:83651806-83651825 | Msa0381470:intron | 40.0% | |
TCCGAGAACTCAGTTTCAAT+GGG | + | chr3_1:83651886-83651905 | Msa0381470:intron | 40.0% | |
TCCCATTGAAACTGAGTTCT+CGG | - | chr3_1:83651890-83651909 | None:intergenic | 40.0% | |
ATCGTGTTATGTGACTGCAA+AGG | + | chr3_1:83651926-83651945 | Msa0381470:intron | 40.0% | |
TCGTGTTATGTGACTGCAAA+GGG | + | chr3_1:83651927-83651946 | Msa0381470:intron | 40.0% | |
! | ATTAAGTTGCGGTGAATTCG+AGG | - | chr3_1:83651960-83651979 | None:intergenic | 40.0% |
! | GATTAAGACCAAATCGGTTC+AGG | + | chr3_1:83652198-83652217 | Msa0381470:intron | 40.0% |
ACAGAAAACTTCATCTGCCT+CGG | - | chr3_1:83652257-83652276 | None:intergenic | 40.0% | |
! | GCAGATGAAGTTTTCTGTAC+AGG | + | chr3_1:83652259-83652278 | Msa0381470:CDS | 40.0% |
! | GTGGACTATAAAACAGGTTC+TGG | + | chr3_1:83652647-83652666 | Msa0381470:CDS | 40.0% |
CTTGCACAACTCTTGACAAA+TGG | - | chr3_1:83652675-83652694 | None:intergenic | 40.0% | |
! | GAGTTGTGCAAGACCATTTT+AGG | + | chr3_1:83652683-83652702 | Msa0381470:CDS | 40.0% |
!! | CATATATTCGAAAGGCACCA+AGG | + | chr3_1:83652899-83652918 | Msa0381470:three_prime_UTR | 40.0% |
!! | TATATTCGAAAGGCACCAAG+GGG | + | chr3_1:83652901-83652920 | Msa0381470:three_prime_UTR | 40.0% |
TTGGAGGAAGAACGATAACC+AGG | - | chr3_1:83640614-83640633 | None:intergenic | 45.0% | |
TGGTTATCGTTCTTCCTCCA+AGG | + | chr3_1:83640613-83640632 | Msa0381470:CDS | 45.0% | |
TCACGAGAAATCGGTCCAAA+GGG | - | chr3_1:83641317-83641336 | None:intergenic | 45.0% | |
TTATTCAGGGGTGGATCTTG+GGG | + | chr3_1:83641508-83641527 | Msa0381470:intron | 45.0% | |
TTGTTGTGCTGCCAACTTTG+TGG | + | chr3_1:83641609-83641628 | Msa0381470:intron | 45.0% | |
TGTTGTGCTGCCAACTTTGT+GGG | + | chr3_1:83641610-83641629 | Msa0381470:intron | 45.0% | |
! | AGTTACCTGTAAGTTGGGTC+CGG | - | chr3_1:83642116-83642135 | None:intergenic | 45.0% |
CGATGATGAGTACGCTAATG+TGG | + | chr3_1:83642280-83642299 | Msa0381470:CDS | 45.0% | |
! | GCTGGCCAAAATTTTGGACA+TGG | + | chr3_1:83642365-83642384 | Msa0381470:CDS | 45.0% |
CATGGACAGCTTAATCGGTA+TGG | + | chr3_1:83642383-83642402 | Msa0381470:CDS | 45.0% | |
TACGTGACCCCATCAATAGA+AGG | - | chr3_1:83642866-83642885 | None:intergenic | 45.0% | |
TTCTCGCGTGTCCAATCTTT+GGG | - | chr3_1:83643117-83643136 | None:intergenic | 45.0% | |
GACTGTGTTGCCAAATCATG+AGG | + | chr3_1:83643438-83643457 | Msa0381470:intron | 45.0% | |
CTGTGTTGCCAAATCATGAG+GGG | + | chr3_1:83643440-83643459 | Msa0381470:intron | 45.0% | |
TATCGTCTCCCCTCATGATT+TGG | - | chr3_1:83643451-83643470 | None:intergenic | 45.0% | |
CATGTTGTGCAGTAAGTGTG+AGG | - | chr3_1:83643612-83643631 | None:intergenic | 45.0% | |
AATAATGTCCGTGCCTCAGT+GGG | - | chr3_1:83644146-83644165 | None:intergenic | 45.0% | |
TAATAATGTCCGTGCCTCAG+TGG | - | chr3_1:83644147-83644166 | None:intergenic | 45.0% | |
TTTGACAGACCAGCAGCATA+AGG | + | chr3_1:83644524-83644543 | Msa0381470:intron | 45.0% | |
CCGTTAGAATCTGACTGGAA+TGG | - | chr3_1:83644909-83644928 | None:intergenic | 45.0% | |
ATGCTTCAGAAGGTTGCCAA+TGG | - | chr3_1:83644934-83644953 | None:intergenic | 45.0% | |
! | GAGATTGAAGGCATATCAGG+AGG | - | chr3_1:83645118-83645137 | None:intergenic | 45.0% |
! | GAAGCTTCGGGAAGCATAAT+AGG | + | chr3_1:83645735-83645754 | Msa0381470:intron | 45.0% |
! | GGTGTAGCACCTTTTACAAC+AGG | + | chr3_1:83645768-83645787 | Msa0381470:intron | 45.0% |
! | TAGCACCTTTTACAACAGGG+TGG | + | chr3_1:83645772-83645791 | Msa0381470:intron | 45.0% |
TTGGACCACCCTGTTGTAAA+AGG | - | chr3_1:83645780-83645799 | None:intergenic | 45.0% | |
CCCTTCAGCGAGTGAATTAT+TGG | - | chr3_1:83645799-83645818 | None:intergenic | 45.0% | |
TGCCCCTTCTTCATCACAAT+TGG | - | chr3_1:83646210-83646229 | None:intergenic | 45.0% | |
GGATTGAATTCAACCAGGAG+GGG | - | chr3_1:83646399-83646418 | None:intergenic | 45.0% | |
GGGATTGAATTCAACCAGGA+GGG | - | chr3_1:83646400-83646419 | None:intergenic | 45.0% | |
TGGGATTGAATTCAACCAGG+AGG | - | chr3_1:83646401-83646420 | None:intergenic | 45.0% | |
GCTACACATTCCAAATTGGC+AGG | - | chr3_1:83646928-83646947 | None:intergenic | 45.0% | |
GCTGCATATTATGAGGCAGA+AGG | - | chr3_1:83646950-83646969 | None:intergenic | 45.0% | |
CTATCCTCCCCACAATACAA+AGG | + | chr3_1:83647934-83647953 | Msa0381470:intron | 45.0% | |
! | TTGGCAATTTGGGGTTGCTT+TGG | - | chr3_1:83648011-83648030 | None:intergenic | 45.0% |
GGGGAGGTTATCAGAATTGA+TGG | - | chr3_1:83648062-83648081 | None:intergenic | 45.0% | |
GGTTCAGTTATTAGTTGGGG+AGG | - | chr3_1:83648078-83648097 | None:intergenic | 45.0% | |
!!! | CCCGTTTGAGTTGTGGTTTT+TGG | - | chr3_1:83648281-83648300 | None:intergenic | 45.0% |
TGGTGCACTTCCGATAATTC+AGG | - | chr3_1:83648748-83648767 | None:intergenic | 45.0% | |
TCAGAGATCCGAACTCGAAT+TGG | + | chr3_1:83648823-83648842 | Msa0381470:intron | 45.0% | |
GATCCGAACTCGAATTGGAT+CGG | + | chr3_1:83648828-83648847 | Msa0381470:intron | 45.0% | |
! | TCACCGATCCAATTCGAGTT+CGG | - | chr3_1:83648834-83648853 | None:intergenic | 45.0% |
AACTCGAATTGGATCGGTGA+GGG | + | chr3_1:83648834-83648853 | Msa0381470:intron | 45.0% | |
TGGAGGTGAAAACATGCGTT+AGG | + | chr3_1:83648988-83649007 | Msa0381470:intron | 45.0% | |
GGAGGTGAAAACATGCGTTA+GGG | + | chr3_1:83648989-83649008 | Msa0381470:intron | 45.0% | |
GTGAAAACATGCGTTAGGGT+TGG | + | chr3_1:83648993-83649012 | Msa0381470:intron | 45.0% | |
!! | ACATGCGTTAGGGTTGGTTT+AGG | + | chr3_1:83648999-83649018 | Msa0381470:intron | 45.0% |
!! | TAGGGTTGGTTTAGGAACGA+TGG | + | chr3_1:83649007-83649026 | Msa0381470:intron | 45.0% |
! | AGGCACGAAAGCATACAGAA+AGG | + | chr3_1:83649392-83649411 | Msa0381470:CDS | 45.0% |
! | TGCTAGAGCAGTTTGCTTCA+AGG | - | chr3_1:83649526-83649545 | None:intergenic | 45.0% |
TGCTCTAGCAAACAAGCGTT+GGG | + | chr3_1:83649536-83649555 | Msa0381470:CDS | 45.0% | |
AATGTATAGGTTCCTCCACC+GGG | + | chr3_1:83649676-83649695 | Msa0381470:intron | 45.0% | |
GCAAAGGGTCGTTGTATCTT+AGG | + | chr3_1:83649698-83649717 | Msa0381470:CDS | 45.0% | |
TATCTTAGGCCACTGCTCTT+AGG | + | chr3_1:83649712-83649731 | Msa0381470:CDS | 45.0% | |
AGGAATGTGTATTCAGGTGC+TGG | - | chr3_1:83649763-83649782 | None:intergenic | 45.0% | |
! | GAACAGGGGAAGCATATATG+AGG | - | chr3_1:83649783-83649802 | None:intergenic | 45.0% |
CCCTGTTCGCAACTATTTCA+AGG | + | chr3_1:83649795-83649814 | Msa0381470:CDS | 45.0% | |
!! | CGCGCCACTTAATTTGTATG+TGG | + | chr3_1:83649931-83649950 | Msa0381470:CDS | 45.0% |
CCATCAAGACCTACATGTCA+AGG | - | chr3_1:83650453-83650472 | None:intergenic | 45.0% | |
CCTTGACATGTAGGTCTTGA+TGG | + | chr3_1:83650450-83650469 | Msa0381470:intron | 45.0% | |
CAAAATAGAGCCAAGAGCAG+AGG | + | chr3_1:83650475-83650494 | Msa0381470:CDS | 45.0% | |
ATCGGAAAATCCTCTGCTCT+TGG | - | chr3_1:83650488-83650507 | None:intergenic | 45.0% | |
ATGGAAAAGTTCAGAGCCAG+AGG | + | chr3_1:83650735-83650754 | Msa0381470:intron | 45.0% | |
! | AGCCAGAGGTTCTGATGATA+GGG | + | chr3_1:83650749-83650768 | Msa0381470:intron | 45.0% |
AACCCTATCATCAGAACCTC+TGG | - | chr3_1:83650754-83650773 | None:intergenic | 45.0% | |
CAGTTAGAGCATGCACAACT+AGG | - | chr3_1:83650911-83650930 | None:intergenic | 45.0% | |
TGTGCATGCTCTAACTGATC+TGG | + | chr3_1:83650914-83650933 | Msa0381470:intron | 45.0% | |
!! | ATTGATGGCAGGCGTTGAAA+TGG | - | chr3_1:83651022-83651041 | None:intergenic | 45.0% |
ATTTCAACGCCTGCCATCAA+TGG | + | chr3_1:83651021-83651040 | Msa0381470:CDS | 45.0% | |
! | AGTATGGTTCCATTGATGGC+AGG | - | chr3_1:83651033-83651052 | None:intergenic | 45.0% |
! | TGCCAGTGATTTGGGTTATC+AGG | + | chr3_1:83651086-83651105 | Msa0381470:CDS | 45.0% |
TCTCAGAGTTCTCCCATGTA+TGG | + | chr3_1:83651720-83651739 | Msa0381470:intron | 45.0% | |
CTCTGACTGTGACCATACAT+GGG | - | chr3_1:83651735-83651754 | None:intergenic | 45.0% | |
TCTCTGACTGTGACCATACA+TGG | - | chr3_1:83651736-83651755 | None:intergenic | 45.0% | |
CTCCGAGAACTCAGTTTCAA+TGG | + | chr3_1:83651885-83651904 | Msa0381470:intron | 45.0% | |
! | TAAGACCAAATCGGTTCAGG+TGG | + | chr3_1:83652201-83652220 | Msa0381470:intron | 45.0% |
TTCTGTACAGGAACTGCTGT+CGG | + | chr3_1:83652271-83652290 | Msa0381470:CDS | 45.0% | |
TGGTATGTGATACTCCCTAC+AGG | - | chr3_1:83652304-83652323 | None:intergenic | 45.0% | |
!! | TGCAGGGTGGACTATAAAAC+AGG | + | chr3_1:83652641-83652660 | Msa0381470:intron | 45.0% |
ACAGGTGAAGAAGGACTGAA+GGG | - | chr3_1:83652932-83652951 | None:intergenic | 45.0% | |
TACAGGTGAAGAAGGACTGA+AGG | - | chr3_1:83652933-83652952 | None:intergenic | 45.0% | |
!!! | TTTTTTTTTTTATTATCAAA+AGG | - | chr3_1:83641352-83641371 | None:intergenic | 5.0% |
!! | TAACAATAAAAAATTAAATT+AGG | - | chr3_1:83643680-83643699 | None:intergenic | 5.0% |
!!! | AAAAAAAACTATTTATTTTT+TGG | + | chr3_1:83643904-83643923 | Msa0381470:intron | 5.0% |
!!! | ATTTCTTATTTAAAATATAT+AGG | + | chr3_1:83649359-83649378 | Msa0381470:intron | 5.0% |
!!! | TTTCTTATTTAAAATATATA+GGG | + | chr3_1:83649360-83649379 | Msa0381470:intron | 5.0% |
!!! | GTGCGTGTGCTTTTTCCCAT+AGG | + | chr3_1:83640459-83640478 | Msa0381470:five_prime_UTR | 50.0% |
AGGAAACTGCTTCTTCGTCC+TGG | + | chr3_1:83640593-83640612 | Msa0381470:CDS | 50.0% | |
TGAGTCCCCCAGAAAATTGG+AGG | - | chr3_1:83641212-83641231 | None:intergenic | 50.0% | |
CACGAGAAATCGGTCCAAAG+GGG | - | chr3_1:83641316-83641335 | None:intergenic | 50.0% | |
GTCACGAGAAATCGGTCCAA+AGG | - | chr3_1:83641318-83641337 | None:intergenic | 50.0% | |
TTGGGGTGCAAAGAGCTCAA+TGG | + | chr3_1:83641525-83641544 | Msa0381470:intron | 50.0% | |
GCAAAGAGCTCAATGGAGCT+AGG | + | chr3_1:83641532-83641551 | Msa0381470:intron | 50.0% | |
AATGGAGCTAGGCCTCCTTA+AGG | + | chr3_1:83641543-83641562 | Msa0381470:intron | 50.0% | |
AAACCATGCGCCCACAAAGT+TGG | - | chr3_1:83641623-83641642 | None:intergenic | 50.0% | |
! | CTTTGTGGGCGCATGGTTTT+TGG | + | chr3_1:83641624-83641643 | Msa0381470:intron | 50.0% |
TTGGGTCCGGAATTGGAAGA+GGG | - | chr3_1:83642103-83642122 | None:intergenic | 50.0% | |
! | CTGTAAGTTGGGTCCGGAAT+TGG | - | chr3_1:83642110-83642129 | None:intergenic | 50.0% |
CAATTCCGGACCCAACTTAC+AGG | + | chr3_1:83642108-83642127 | Msa0381470:CDS | 50.0% | |
!! | AATGTGGATTGGGACAGCCT+TGG | + | chr3_1:83642296-83642315 | Msa0381470:CDS | 50.0% |
!! | ATGTGGATTGGGACAGCCTT+GGG | + | chr3_1:83642297-83642316 | Msa0381470:CDS | 50.0% |
TTGGCATGAGTCCAAACCCA+AGG | - | chr3_1:83642316-83642335 | None:intergenic | 50.0% | |
ATTGAACTTAGCCCATCCGC+AGG | + | chr3_1:83642410-83642429 | Msa0381470:CDS | 50.0% | |
TTGAACTTAGCCCATCCGCA+GGG | + | chr3_1:83642411-83642430 | Msa0381470:CDS | 50.0% | |
! | AATTTAGGACCCCTGCGGAT+GGG | - | chr3_1:83642424-83642443 | None:intergenic | 50.0% |
! | TAATTTAGGACCCCTGCGGA+TGG | - | chr3_1:83642425-83642444 | None:intergenic | 50.0% |
TCCGCAGGGGTCCTAAATTA+TGG | + | chr3_1:83642425-83642444 | Msa0381470:CDS | 50.0% | |
! | GCCATAATTTAGGACCCCTG+CGG | - | chr3_1:83642429-83642448 | None:intergenic | 50.0% |
AGGGGTCCTAAATTATGGCC+AGG | + | chr3_1:83642430-83642449 | Msa0381470:CDS | 50.0% | |
! | GGATCATCCACCGATTGTGA+CGG | + | chr3_1:83642687-83642706 | Msa0381470:intron | 50.0% |
ATGTAACTCCCCCCTCAAAC+CGG | - | chr3_1:83642721-83642740 | None:intergenic | 50.0% | |
ATGGTGTGGACCAACCGAAT+GGG | - | chr3_1:83642889-83642908 | None:intergenic | 50.0% | |
CTTCTCGCGTGTCCAATCTT+TGG | - | chr3_1:83643118-83643137 | None:intergenic | 50.0% | |
GATTGGACACGCGAGAAGAT+TGG | + | chr3_1:83643120-83643139 | Msa0381470:intron | 50.0% | |
TGGCAACACAGTCTCGTGTA+TGG | - | chr3_1:83643431-83643450 | None:intergenic | 50.0% | |
CTACATTTCCCACTGAGGCA+CGG | + | chr3_1:83644135-83644154 | Msa0381470:intron | 50.0% | |
ATATGACCCGTGCGTTAGCA+CGG | - | chr3_1:83644275-83644294 | None:intergenic | 50.0% | |
TAACGCACGGGTCATATGGA+AGG | + | chr3_1:83644278-83644297 | Msa0381470:intron | 50.0% | |
! | TGTGCTACTCCTTATGCTGC+TGG | - | chr3_1:83644536-83644555 | None:intergenic | 50.0% |
TCAGATTCTAACGGGGCCAT+TGG | + | chr3_1:83644915-83644934 | Msa0381470:intron | 50.0% | |
! | GCTTGATGACAGCAGCAAGA+GGG | - | chr3_1:83647164-83647183 | None:intergenic | 50.0% |
! | AGCTTGATGACAGCAGCAAG+AGG | - | chr3_1:83647165-83647184 | None:intergenic | 50.0% |
! | TTGGGGTTGCTTTGGCAGAT+TGG | - | chr3_1:83648003-83648022 | None:intergenic | 50.0% |
GCTTAGTTCAGGGAGGTCTT+TGG | - | chr3_1:83648113-83648132 | None:intergenic | 50.0% | |
GTGTTTCGCTTAGTTCAGGG+AGG | - | chr3_1:83648120-83648139 | None:intergenic | 50.0% | |
!! | GTGGATTCCCGTTTGAGTTG+TGG | - | chr3_1:83648288-83648307 | None:intergenic | 50.0% |
ACTCAAACGGGAATCCACGA+AGG | + | chr3_1:83648290-83648309 | Msa0381470:intron | 50.0% | |
!!! | AAGACGGTGTTTTGGCTTGG+TGG | - | chr3_1:83648363-83648382 | None:intergenic | 50.0% |
ACCAAGCCAAAACACCGTCT+TGG | + | chr3_1:83648362-83648381 | Msa0381470:intron | 50.0% | |
!!! | TCCAAGACGGTGTTTTGGCT+TGG | - | chr3_1:83648366-83648385 | None:intergenic | 50.0% |
ATTGCTATCATCTTCGCCGG+AGG | + | chr3_1:83648774-83648793 | Msa0381470:intron | 50.0% | |
GAACTCGAATTGGATCGGTG+AGG | + | chr3_1:83648833-83648852 | Msa0381470:intron | 50.0% | |
TTGGATCGGTGAGGGATAGA+TGG | + | chr3_1:83648842-83648861 | Msa0381470:intron | 50.0% | |
AGAGAGAGAGAGAGAGAGAC+AGG | + | chr3_1:83648879-83648898 | Msa0381470:intron | 50.0% | |
CTGCTCTAGCAAACAAGCGT+TGG | + | chr3_1:83649535-83649554 | Msa0381470:CDS | 50.0% | |
AGATACAACGACCCTTTGCC+CGG | - | chr3_1:83649697-83649716 | None:intergenic | 50.0% | |
ACTGCTCTTAGGAAGTGGTC+CGG | + | chr3_1:83649723-83649742 | Msa0381470:CDS | 50.0% | |
TTAGGAAGTGGTCCGGTTCT+TGG | + | chr3_1:83649730-83649749 | Msa0381470:CDS | 50.0% | |
AAGTGGTCCGGTTCTTGGTT+TGG | + | chr3_1:83649735-83649754 | Msa0381470:CDS | 50.0% | |
! | GAGCCAGAGGTTCTGATGAT+AGG | + | chr3_1:83650748-83650767 | Msa0381470:intron | 50.0% |
AGTTCTCGGAGCGTGAGATT+GGG | - | chr3_1:83651876-83651895 | None:intergenic | 50.0% | |
GTTGCGGTGAATTCGAGGTT+AGG | - | chr3_1:83651955-83651974 | None:intergenic | 50.0% | |
CTCTTCCACCTGAACCGATT+TGG | - | chr3_1:83652209-83652228 | None:intergenic | 50.0% | |
TGCTGTGGATGAATTGACCG+AGG | + | chr3_1:83652237-83652256 | Msa0381470:CDS | 50.0% | |
CAGGAAAACTTGGACTCGTG+AGG | - | chr3_1:83652597-83652616 | None:intergenic | 50.0% | |
AGGTGAAGAAGGACTGAAGG+GGG | - | chr3_1:83652930-83652949 | None:intergenic | 50.0% | |
CAGGTGAAGAAGGACTGAAG+GGG | - | chr3_1:83652931-83652950 | None:intergenic | 50.0% | |
CACTTACAAAGCCGAGCCTC+CGG | + | chr3_1:83641903-83641922 | Msa0381470:intron | 55.0% | |
TTCCTACGAATCCGGAGGCT+CGG | - | chr3_1:83641917-83641936 | None:intergenic | 55.0% | |
AGCCTCCGGATTCGTAGGAA+CGG | + | chr3_1:83641917-83641936 | Msa0381470:intron | 55.0% | |
TCCGGAATTGGAAGAGGGGA+GGG | - | chr3_1:83642098-83642117 | None:intergenic | 55.0% | |
TGGGTCCGGAATTGGAAGAG+GGG | - | chr3_1:83642102-83642121 | None:intergenic | 55.0% | |
GTTGGGTCCGGAATTGGAAG+AGG | - | chr3_1:83642104-83642123 | None:intergenic | 55.0% | |
GATTGGGACAGCCTTGGGTT+TGG | + | chr3_1:83642302-83642321 | Msa0381470:CDS | 55.0% | |
TGAACTTAGCCCATCCGCAG+GGG | + | chr3_1:83642412-83642431 | Msa0381470:CDS | 55.0% | |
CAATCGGTGGATGATCCACC+TGG | - | chr3_1:83642684-83642703 | None:intergenic | 55.0% | |
! | TCATCCACCGATTGTGACGG+TGG | + | chr3_1:83642690-83642709 | Msa0381470:intron | 55.0% |
ACTACCACCGTCACAATCGG+TGG | - | chr3_1:83642697-83642716 | None:intergenic | 55.0% | |
GGCACTACCACCGTCACAAT+CGG | - | chr3_1:83642700-83642719 | None:intergenic | 55.0% | |
! | GATTGTGACGGTGGTAGTGC+CGG | + | chr3_1:83642699-83642718 | Msa0381470:intron | 55.0% |
GATGGGGTCACGTACCCATT+CGG | + | chr3_1:83642872-83642891 | Msa0381470:intron | 55.0% | |
GATGGTGTGGACCAACCGAA+TGG | - | chr3_1:83642890-83642909 | None:intergenic | 55.0% | |
TGGACACGCGAGAAGATTGG+AGG | + | chr3_1:83643123-83643142 | Msa0381470:intron | 55.0% | |
GGACACGCGAGAAGATTGGA+GGG | + | chr3_1:83643124-83643143 | Msa0381470:intron | 55.0% | |
TATGACCCGTGCGTTAGCAC+GGG | - | chr3_1:83644274-83644293 | None:intergenic | 55.0% | |
GTGCTAACGCACGGGTCATA+TGG | + | chr3_1:83644274-83644293 | Msa0381470:intron | 55.0% | |
TGGCCCCGTTAGAATCTGAC+TGG | - | chr3_1:83644914-83644933 | None:intergenic | 55.0% | |
GGTTGTGACATTGCTCGCTG+AGG | - | chr3_1:83647301-83647320 | None:intergenic | 55.0% | |
! | CAGGCGTTGTCTGCAGTTTG+TGG | - | chr3_1:83648235-83648254 | None:intergenic | 55.0% |
!!! | ACGGTGTTTTGGCTTGGTGG+AGG | - | chr3_1:83648360-83648379 | None:intergenic | 55.0% |
AGGCCACTGCTCTTAGGAAG+TGG | + | chr3_1:83649718-83649737 | Msa0381470:CDS | 55.0% | |
GGACCACTTCCTAAGAGCAG+TGG | - | chr3_1:83649724-83649743 | None:intergenic | 55.0% | |
GCTGGAGCCAAACCAAGAAC+CGG | - | chr3_1:83649745-83649764 | None:intergenic | 55.0% | |
TTTGACCGTGCTTCGCAACG+CGG | + | chr3_1:83649962-83649981 | Msa0381470:CDS | 55.0% | |
CAGAGACTCGCAGTCACAAC+TGG | + | chr3_1:83651750-83651769 | Msa0381470:CDS | 55.0% | |
GAGTTCTCGGAGCGTGAGAT+TGG | - | chr3_1:83651877-83651896 | None:intergenic | 55.0% | |
!! | CTGTCGGTGTTGCTCCTGTA+GGG | + | chr3_1:83652287-83652306 | Msa0381470:CDS | 55.0% |
GGTGAAGAAGGACTGAAGGG+GGG | - | chr3_1:83652929-83652948 | None:intergenic | 55.0% | |
CTGCCAACTTTGTGGGCGCA+TGG | + | chr3_1:83641617-83641636 | Msa0381470:intron | 60.0% | |
GCCCTCCCCTCTTCCAATTC+CGG | + | chr3_1:83642094-83642113 | Msa0381470:CDS | 60.0% | |
GTCCGGAATTGGAAGAGGGG+AGG | - | chr3_1:83642099-83642118 | None:intergenic | 60.0% | |
!! | ACGGTGGTAGTGCCGGTTTG+AGG | + | chr3_1:83642706-83642725 | Msa0381470:intron | 60.0% |
!! | CGGTGGTAGTGCCGGTTTGA+GGG | + | chr3_1:83642707-83642726 | Msa0381470:intron | 60.0% |
!! | GGTGGTAGTGCCGGTTTGAG+GGG | + | chr3_1:83642708-83642727 | Msa0381470:intron | 60.0% |
!! | GTGGTAGTGCCGGTTTGAGG+GGG | + | chr3_1:83642709-83642728 | Msa0381470:intron | 60.0% |
!! | TGGTAGTGCCGGTTTGAGGG+GGG | + | chr3_1:83642710-83642729 | Msa0381470:intron | 60.0% |
GGGTCACGTACCCATTCGGT+TGG | + | chr3_1:83642876-83642895 | Msa0381470:intron | 60.0% | |
CATCGACCCGTGCTAACGCA+CGG | + | chr3_1:83644265-83644284 | Msa0381470:intron | 60.0% | |
ATCGACCCGTGCTAACGCAC+GGG | + | chr3_1:83644266-83644285 | Msa0381470:intron | 60.0% | |
CTCGCTGAAGGGAGAACACG+TGG | + | chr3_1:83645807-83645826 | Msa0381470:intron | 60.0% | |
GCTATCATCTTCGCCGGAGG+CGG | + | chr3_1:83648777-83648796 | Msa0381470:intron | 60.0% | |
TAGGTTCCTCCACCGGGCAA+AGG | + | chr3_1:83649682-83649701 | Msa0381470:intron | 60.0% | |
AGGTTCCTCCACCGGGCAAA+GGG | + | chr3_1:83649683-83649702 | Msa0381470:intron | 60.0% | |
TACAACGACCCTTTGCCCGG+TGG | - | chr3_1:83649694-83649713 | None:intergenic | 60.0% | |
TTGACCGTGCTTCGCAACGC+GGG | + | chr3_1:83649963-83649982 | Msa0381470:CDS | 60.0% | |
! | GGAAGAGCGCGTTGTTGCTG+TGG | + | chr3_1:83652222-83652241 | Msa0381470:CDS | 60.0% |
!! | GCTGTCGGTGTTGCTCCTGT+AGG | + | chr3_1:83652286-83652305 | Msa0381470:CDS | 60.0% |
TTGGACTCGTGAGGCACGTC+CGG | - | chr3_1:83652588-83652607 | None:intergenic | 60.0% | |
AGCCGAGCCTCCGGATTCGT+AGG | + | chr3_1:83641912-83641931 | Msa0381470:intron | 65.0% | |
GGCCGTTCCTACGAATCCGG+AGG | - | chr3_1:83641922-83641941 | None:intergenic | 65.0% | |
CCGGGCCGTTCCTACGAATC+CGG | - | chr3_1:83641925-83641944 | None:intergenic | 65.0% | |
CCGGATTCGTAGGAACGGCC+CGG | + | chr3_1:83641922-83641941 | Msa0381470:intron | 65.0% | |
GGTGGTCGGGGTTTGAACCC+CGG | + | chr3_1:83643928-83643947 | Msa0381470:intron | 65.0% | |
CGTGCGTTAGCACGGGTCGA+TGG | - | chr3_1:83644267-83644286 | None:intergenic | 65.0% | |
GATCGGCATCTGTCCCCTCC+TGG | + | chr3_1:83646383-83646402 | Msa0381470:intron | 65.0% | |
ATCATCTTCGCCGGAGGCGG+TGG | + | chr3_1:83648780-83648799 | Msa0381470:intron | 65.0% | |
AACGACCCTTTGCCCGGTGG+AGG | - | chr3_1:83649691-83649710 | None:intergenic | 65.0% | |
CAGTCCCGCGTTGCGAAGCA+CGG | - | chr3_1:83649970-83649989 | None:intergenic | 65.0% | |
TGGACTCGTGAGGCACGTCC+GGG | - | chr3_1:83652587-83652606 | None:intergenic | 65.0% | |
!! | GACTGAAGGGGGGTACCCCT+TGG | - | chr3_1:83652919-83652938 | None:intergenic | 65.0% |
CTGTCGCGAACCACCGCCTC+CGG | - | chr3_1:83648793-83648812 | None:intergenic | 70.0% | |
GAGGCGGTGGTTCGCGACAG+CGG | + | chr3_1:83648793-83648812 | Msa0381470:intron | 70.0% | |
GGTGGTTCGCGACAGCGGTG+AGG | + | chr3_1:83648798-83648817 | Msa0381470:intron | 70.0% | |
CGTGCTTCGCAACGCGGGAC+TGG | + | chr3_1:83649968-83649987 | Msa0381470:CDS | 70.0% | |
GGACTCGTGAGGCACGTCCG+GGG | - | chr3_1:83652586-83652605 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 83640308 | 83652979 | 83640308 | ID=Msa0381470;Name=Msa0381470 |
chr3_1 | mRNA | 83640308 | 83652979 | 83640308 | ID=Msa0381470-mRNA-1;Parent=Msa0381470;Name=Msa0381470-mRNA-1;_AED=0.08;_eAED=0.08;_QI=252|0.8|0.90|0.90|0.9|1|11|219|406 |
chr3_1 | exon | 83640308 | 83640634 | 83640308 | ID=Msa0381470-mRNA-1:exon:21564;Parent=Msa0381470-mRNA-1 |
chr3_1 | exon | 83642065 | 83642129 | 83642065 | ID=Msa0381470-mRNA-1:exon:21565;Parent=Msa0381470-mRNA-1 |
chr3_1 | exon | 83642277 | 83642451 | 83642277 | ID=Msa0381470-mRNA-1:exon:21566;Parent=Msa0381470-mRNA-1 |
chr3_1 | exon | 83649381 | 83649557 | 83649381 | ID=Msa0381470-mRNA-1:exon:21567;Parent=Msa0381470-mRNA-1 |
chr3_1 | exon | 83649685 | 83649816 | 83649685 | ID=Msa0381470-mRNA-1:exon:21568;Parent=Msa0381470-mRNA-1 |
chr3_1 | exon | 83649923 | 83650021 | 83649923 | ID=Msa0381470-mRNA-1:exon:21569;Parent=Msa0381470-mRNA-1 |
chr3_1 | exon | 83650463 | 83650579 | 83650463 | ID=Msa0381470-mRNA-1:exon:21570;Parent=Msa0381470-mRNA-1 |
chr3_1 | exon | 83651012 | 83651107 | 83651012 | ID=Msa0381470-mRNA-1:exon:21571;Parent=Msa0381470-mRNA-1 |
chr3_1 | exon | 83651726 | 83651782 | 83651726 | ID=Msa0381470-mRNA-1:exon:21572;Parent=Msa0381470-mRNA-1 |
chr3_1 | exon | 83652220 | 83652332 | 83652220 | ID=Msa0381470-mRNA-1:exon:21573;Parent=Msa0381470-mRNA-1 |
chr3_1 | exon | 83652646 | 83652979 | 83652646 | ID=Msa0381470-mRNA-1:exon:21574;Parent=Msa0381470-mRNA-1 |
chr3_1 | five_prime_UTR | 83640308 | 83640559 | 83640308 | ID=Msa0381470-mRNA-1:five_prime_utr;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83640560 | 83640634 | 83640560 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83642065 | 83642129 | 83642065 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83642277 | 83642451 | 83642277 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83649381 | 83649557 | 83649381 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83649685 | 83649816 | 83649685 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83649923 | 83650021 | 83649923 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83650463 | 83650579 | 83650463 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83651012 | 83651107 | 83651012 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83651726 | 83651782 | 83651726 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83652220 | 83652332 | 83652220 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | CDS | 83652646 | 83652760 | 83652646 | ID=Msa0381470-mRNA-1:cds;Parent=Msa0381470-mRNA-1 |
chr3_1 | three_prime_UTR | 83652761 | 83652979 | 83652761 | ID=Msa0381470-mRNA-1:three_prime_utr;Parent=Msa0381470-mRNA-1 |
Gene Sequence |
Protein sequence |