Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130480 | XP_013450604.1 | 87.984 | 258 | 27 | 2 | 1 | 258 | 1 | 254 | 1.78e-154 | 440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130480 | sp|O32107|YUID_BACSU | 48.322 | 149 | 62 | 2 | 111 | 246 | 3 | 149 | 4.55e-28 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130480 | A0A072U4K7 | 87.984 | 258 | 27 | 2 | 1 | 258 | 1 | 254 | 8.52e-155 | 440 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa1130480 | 0.811245 | 7.708279e-51 | -8.615850e-47 |
| Msa0045660 | Msa1130480 | 0.812103 | 5.017528e-51 | -8.615850e-47 |
| Msa0622690 | Msa1130480 | 0.809869 | 1.528388e-50 | -8.615850e-47 |
| Msa0623270 | Msa1130480 | 0.800347 | 1.504110e-48 | -8.615850e-47 |
| Msa0792510 | Msa1130480 | 0.803184 | 3.935194e-49 | -8.615850e-47 |
| Msa0175530 | Msa1130480 | 0.801901 | 7.234340e-49 | -8.615850e-47 |
| Msa0373130 | Msa1130480 | 0.802710 | 4.930582e-49 | -8.615850e-47 |
| Msa1067710 | Msa1130480 | 0.807169 | 5.763965e-50 | -8.615850e-47 |
| Msa0264940 | Msa1130480 | -0.838727 | 2.421767e-57 | -8.615850e-47 |
| Msa0302990 | Msa1130480 | -0.835675 | 1.461679e-56 | -8.615850e-47 |
| Msa1130460 | Msa1130480 | 0.986014 | 2.154637e-165 | -8.615850e-47 |
| Msa1130480 | Msa1191390 | 0.813910 | 2.015067e-51 | -8.615850e-47 |
| Msa1130480 | Msa1341440 | 0.919689 | 3.286987e-87 | -8.615850e-47 |
| Msa1130480 | Msa1371840 | 0.819027 | 1.440860e-52 | -8.615850e-47 |
| Msa1130480 | Msa1373950 | 0.802648 | 5.078403e-49 | -8.615850e-47 |
| Msa1130480 | Msa1395640 | 0.806103 | 9.675996e-50 | -8.615850e-47 |
| Msa1130480 | Msa1426620 | 0.947370 | 7.682056e-106 | -8.615850e-47 |
| Msa1130480 | Msa1431240 | 0.810441 | 1.151209e-50 | -8.615850e-47 |
| Msa1130480 | Msa1440980 | 0.807494 | 4.918501e-50 | -8.615850e-47 |
| Msa1130480 | Msa1460310 | -0.835512 | 1.606821e-56 | -8.615850e-47 |
| Msa0528740 | Msa1130480 | 0.801100 | 1.055810e-48 | -8.615850e-47 |
| Msa0549740 | Msa1130480 | 0.806325 | 8.689759e-50 | -8.615850e-47 |
| Msa0846640 | Msa1130480 | 0.813352 | 2.673001e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130480 | MtrunA17_Chr7g0275651 | 87.857 | 140 | 13 | 1 | 123 | 258 | 100 | 239 | 4.08e-82 | 246 |
| Msa1130480 | MtrunA17_Chr3g0122831 | 50.000 | 136 | 67 | 1 | 114 | 248 | 17 | 152 | 1.05e-40 | 137 |
| Msa1130480 | MtrunA17_Chr2g0322301 | 43.137 | 153 | 84 | 2 | 96 | 247 | 10 | 160 | 8.92e-38 | 130 |
| Msa1130480 | MtrunA17_Chr2g0309391 | 32.203 | 118 | 79 | 1 | 108 | 224 | 55 | 172 | 2.84e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130480 | AT3G61770.1 | 67.453 | 212 | 55 | 2 | 59 | 256 | 71 | 282 | 5.01e-100 | 293 |
| Msa1130480 | AT1G67600.1 | 50.365 | 137 | 67 | 1 | 113 | 248 | 17 | 153 | 6.76e-41 | 139 |
| Msa1130480 | AT1G24350.1 | 49.242 | 132 | 66 | 1 | 113 | 243 | 21 | 152 | 3.52e-39 | 134 |
| Msa1130480 | AT1G24350.5 | 48.800 | 125 | 63 | 1 | 113 | 236 | 21 | 145 | 4.06e-36 | 126 |
| Msa1130480 | AT1G24350.3 | 48.000 | 125 | 64 | 1 | 113 | 236 | 21 | 145 | 7.33e-36 | 126 |
| Msa1130480 | AT1G24350.2 | 48.000 | 125 | 64 | 1 | 113 | 236 | 21 | 145 | 7.89e-36 | 125 |
| Msa1130480 | AT1G24350.4 | 48.387 | 124 | 63 | 1 | 113 | 235 | 21 | 144 | 1.13e-35 | 124 |
| Msa1130480 | AT3G21610.1 | 47.761 | 134 | 68 | 2 | 115 | 247 | 35 | 167 | 1.01e-34 | 123 |
| Msa1130480 | AT3G21610.2 | 48.214 | 112 | 57 | 1 | 137 | 247 | 4 | 115 | 5.06e-30 | 109 |
| Msa1130480 | AT3G12685.1 | 33.962 | 159 | 85 | 3 | 108 | 246 | 47 | 205 | 1.89e-19 | 84.3 |
Find 74 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCCAAAGAAACCATAAT+TGG | 0.165680 | 7_3:+82638182 | Msa1130480:CDS |
| TTGAGATTGTTCTGTGCTTC+TGG | 0.174739 | 7_3:+82638469 | Msa1130480:CDS |
| AAACCCAATTATGGTTTCTT+TGG | 0.186378 | 7_3:-82638186 | None:intergenic |
| TTTAGCTTTCTTTCACTAAT+TGG | 0.198388 | 7_3:-82642320 | None:intergenic |
| CAGCATGAGTATAATGTAAA+TGG | 0.284295 | 7_3:+82642578 | Msa1130480:three_prime_UTR |
| AAGGGAATGAAACCCAATTA+TGG | 0.289882 | 7_3:-82638195 | None:intergenic |
| ACTTAGGATTATTGATTGAT+AGG | 0.294726 | 7_3:+82642452 | Msa1130480:three_prime_UTR |
| CCTCCGGTAGTAAATATAAA+TGG | 0.306046 | 7_3:+82642612 | Msa1130480:three_prime_UTR |
| GGACAATGATGATGGAAGTT+TGG | 0.337325 | 7_3:-82638068 | None:intergenic |
| GATGGAAGTTTGGAAGTTAG+AGG | 0.347072 | 7_3:-82638058 | None:intergenic |
| TCTTTGGGAATTATCTGAAT+TGG | 0.350821 | 7_3:-82638170 | None:intergenic |
| AACCCAATTATGGTTTCTTT+GGG | 0.351443 | 7_3:-82638185 | None:intergenic |
| TGTTTGATTGTTTGCGCAAA+AGG | 0.358717 | 7_3:-82638214 | None:intergenic |
| CTTAGGATTATTGATTGATA+GGG | 0.375389 | 7_3:+82642453 | Msa1130480:three_prime_UTR |
| TTGAGAACAAGAAGTGGAAA+TGG | 0.382093 | 7_3:-82638119 | None:intergenic |
| TACTTGCAAAACGGAGGTTT+GGG | 0.382574 | 7_3:+82638286 | Msa1130480:CDS |
| TTACTTGCAAAACGGAGGTT+TGG | 0.395141 | 7_3:+82638285 | Msa1130480:CDS |
| ATTGTTATGTATGATGCTAT+TGG | 0.409979 | 7_3:+82638601 | Msa1130480:CDS |
| GTGTTTGCTGGTGCCCTGCT+TGG | 0.410993 | 7_3:+82642371 | Msa1130480:CDS |
| GGTAATATAATGCAACCTTC+TGG | 0.413830 | 7_3:+82642491 | Msa1130480:three_prime_UTR |
| ACCCCATCTCAAGTGTTTGC+TGG | 0.426034 | 7_3:+82642359 | Msa1130480:CDS |
| AGGTTGTGTTGTGGTGGGTT+AGG | 0.437936 | 7_3:+82642421 | Msa1130480:CDS |
| TTCCCAAAGAAACCATAATT+GGG | 0.445716 | 7_3:+82638183 | Msa1130480:CDS |
| GGGTTAGGTCGTTAGGACTT+AGG | 0.447284 | 7_3:+82642436 | Msa1130480:exon |
| ATTCTATTCTAGCTAACTCA+TGG | 0.456192 | 7_3:+82638021 | Msa1130480:exon |
| AGAAAGCTAAAGGAACTTCT+TGG | 0.460632 | 7_3:+82642332 | Msa1130480:CDS |
| ACAGGTGCTTAACATGATTC+TGG | 0.467232 | 7_3:+82642277 | Msa1130480:intron |
| TTGTGGTGGGTTAGGTCGTT+AGG | 0.469090 | 7_3:+82642429 | Msa1130480:exon |
| ATTCTGGCTGACATGTTTCA+AGG | 0.469695 | 7_3:+82642293 | Msa1130480:CDS |
| AGACTAAACCCCAAAGAAAC+CGG | 0.472907 | 7_3:-82638577 | None:intergenic |
| ATTTCTTTGTAGAAAGAAAG+TGG | 0.473240 | 7_3:+82638443 | Msa1130480:CDS |
| ACAACCTTGGCAGCAGAAAC+AGG | 0.473702 | 7_3:-82642405 | None:intergenic |
| TGTGCTTGAATGATGAATAC+AGG | 0.475864 | 7_3:-82642542 | None:intergenic |
| GTAGCCTGTTTCTGCTGCCA+AGG | 0.476759 | 7_3:+82642401 | Msa1130480:CDS |
| GAAGTTTGGAAGTTAGAGGA+AGG | 0.482388 | 7_3:-82638054 | None:intergenic |
| AACAACCCAGAAACAAAAGT+TGG | 0.487269 | 7_3:-82638382 | None:intergenic |
| TGAGAACAAGAAGTGGAAAT+GGG | 0.496852 | 7_3:-82638118 | None:intergenic |
| GAAGCCAATGTAGCCACAAA+AGG | 0.498839 | 7_3:-82638355 | None:intergenic |
| GTTTGATTGTTTGCGCAAAA+GGG | 0.499743 | 7_3:-82638213 | None:intergenic |
| TTTCTTTGTAGAAAGAAAGT+GGG | 0.502712 | 7_3:+82638444 | Msa1130480:CDS |
| ATAGGGGATACTATTTGCTC+TGG | 0.503787 | 7_3:+82642470 | Msa1130480:three_prime_UTR |
| CTGCCAAGGTTGTGTTGTGG+TGG | 0.507895 | 7_3:+82642415 | Msa1130480:CDS |
| ACATGCTGGCATGCAAGCTC+AGG | 0.509605 | 7_3:+82638633 | Msa1130480:CDS |
| ACTTCAGTTGCTCTCTGTCA+TGG | 0.510430 | 7_3:+82638535 | Msa1130480:CDS |
| CATAGCGCAGAATGAGAAGA+AGG | 0.513464 | 7_3:-82638499 | None:intergenic |
| GCACCAGCAAACACTTGAGA+TGG | 0.518672 | 7_3:-82642362 | None:intergenic |
| AATTAGTGAAAGAAAGCTAA+AGG | 0.524355 | 7_3:+82642322 | Msa1130480:CDS |
| TTAGGATTATTGATTGATAG+GGG | 0.524996 | 7_3:+82642454 | Msa1130480:three_prime_UTR |
| GGACCATTTATATTTACTAC+CGG | 0.527603 | 7_3:-82642615 | None:intergenic |
| ACAACCCAGAAACAAAAGTT+GGG | 0.531405 | 7_3:-82638381 | None:intergenic |
| TGGGTTGTTTGCGTGGTTTG+TGG | 0.534535 | 7_3:+82638396 | Msa1130480:CDS |
| GATTGTTCTGTGCTTCTGGA+GGG | 0.541900 | 7_3:+82638473 | Msa1130480:CDS |
| AGATTGTTCTGTGCTTCTGG+AGG | 0.542518 | 7_3:+82638472 | Msa1130480:CDS |
| AAGTGTTGTTACTTGCAAAA+CGG | 0.543044 | 7_3:+82638277 | Msa1130480:CDS |
| TGCCAAGGTTGTGTTGTGGT+GGG | 0.550908 | 7_3:+82642416 | Msa1130480:CDS |
| CACCAGCAAACACTTGAGAT+GGG | 0.556379 | 7_3:-82642361 | None:intergenic |
| TTGTTTCTGGGTTGTTTGCG+TGG | 0.569800 | 7_3:+82638389 | Msa1130480:CDS |
| GCAAAACGGAGGTTTGGGAA+TGG | 0.571722 | 7_3:+82638291 | Msa1130480:CDS |
| AAGTGAAAGGACAATGATGA+TGG | 0.573349 | 7_3:-82638076 | None:intergenic |
| ATAAGATTGAGAACAAGAAG+TGG | 0.576173 | 7_3:-82638125 | None:intergenic |
| CTGCTGCCAAGGTTGTGTTG+TGG | 0.588915 | 7_3:+82642412 | Msa1130480:CDS |
| AACCCACCACAACACAACCT+TGG | 0.598748 | 7_3:-82642418 | None:intergenic |
| AAGAAGTGGAAATGGGTCTG+AGG | 0.599234 | 7_3:-82638111 | None:intergenic |
| AGAAGTGGAAATGGGTCTGA+GGG | 0.601799 | 7_3:-82638110 | None:intergenic |
| TTCTGGCTGACATGTTTCAA+GGG | 0.603699 | 7_3:+82642294 | Msa1130480:CDS |
| ATGCGTAACGACGAATGCAA+AGG | 0.606693 | 7_3:+82638321 | Msa1130480:CDS |
| ATTGGTGTTAGAAGACATGC+TGG | 0.633014 | 7_3:+82638619 | Msa1130480:CDS |
| TGTTGTTACTTGCAAAACGG+AGG | 0.648402 | 7_3:+82638280 | Msa1130480:CDS |
| CCATTTATATTTACTACCGG+AGG | 0.653925 | 7_3:-82642612 | None:intergenic |
| GGTACGTTTCATATACCAGA+AGG | 0.659441 | 7_3:-82642506 | None:intergenic |
| GGTGTTGAAGTGAAAGTGAA+AGG | 0.663065 | 7_3:-82638089 | None:intergenic |
| GTGCTTGAATGATGAATACA+GGG | 0.665212 | 7_3:-82642541 | None:intergenic |
| ACCAGCAAACACTTGAGATG+GGG | 0.665470 | 7_3:-82642360 | None:intergenic |
| AATACAGGGCACTAACTATG+CGG | 0.735031 | 7_3:-82642527 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGTAATAAATAATTCAA+GGG | - | chr7_3:82640570-82640589 | None:intergenic | 10.0% |
| !! | TATTTGTAATAAATAATTCA+AGG | - | chr7_3:82640571-82640590 | None:intergenic | 10.0% |
| !!! | AATTTTTCTTTATAAACAAA+AGG | - | chr7_3:82642227-82642246 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGGATATAAGA+GGG | - | chr7_3:82637985-82638004 | None:intergenic | 15.0% |
| !!! | AGAATAGAATGTTTTTTTTT+TGG | - | chr7_3:82637996-82638015 | None:intergenic | 15.0% |
| !! | TACTAATAATCAAATATGAA+AGG | - | chr7_3:82638677-82638696 | None:intergenic | 15.0% |
| !! | ACTGAAGATTTATATATATA+AGG | + | chr7_3:82640101-82640120 | Msa1130480:intron | 15.0% |
| !! | TTTGTAATAAATAATTCAAG+GGG | - | chr7_3:82640569-82640588 | None:intergenic | 15.0% |
| !!! | TATGAATTTTTTTGTTTTAG+AGG | + | chr7_3:82641017-82641036 | Msa1130480:intron | 15.0% |
| !! | TTAAAAAAAATGTATATGCT+TGG | + | chr7_3:82641223-82641242 | Msa1130480:intron | 15.0% |
| !! | ATAATTTACAGAAATGATAT+AGG | + | chr7_3:82641267-82641286 | Msa1130480:intron | 15.0% |
| !! | TAATTTACAGAAATGATATA+GGG | + | chr7_3:82641268-82641287 | Msa1130480:intron | 15.0% |
| !!! | GTTTTTTTTTTGGATATAAG+AGG | - | chr7_3:82637986-82638005 | None:intergenic | 20.0% |
| !! | TAAAAACAACTTATGAGTTA+TGG | - | chr7_3:82638951-82638970 | None:intergenic | 20.0% |
| !!! | CAAAATAATTTGTGTAAACT+CGG | + | chr7_3:82639272-82639291 | Msa1130480:intron | 20.0% |
| !!! | AAAATAATTTGTGTAAACTC+GGG | + | chr7_3:82639273-82639292 | Msa1130480:intron | 20.0% |
| !!! | CATTTTAAGTTTTGTTATTG+TGG | + | chr7_3:82639813-82639832 | Msa1130480:intron | 20.0% |
| !! | TTTGTTGCAACTTAAATAAT+TGG | - | chr7_3:82640044-82640063 | None:intergenic | 20.0% |
| !! | AAGTTAAACAAAAATGAACT+GGG | + | chr7_3:82640395-82640414 | Msa1130480:intron | 20.0% |
| !! | TTGTACTATTTAAAAACCAA+AGG | - | chr7_3:82640426-82640445 | None:intergenic | 20.0% |
| !! | AATGTTCAAAATACTGAATA+TGG | - | chr7_3:82640533-82640552 | None:intergenic | 20.0% |
| !!! | TATTCAGTATTTTGAACATT+AGG | + | chr7_3:82640533-82640552 | Msa1130480:intron | 20.0% |
| !! | TTGTAATAAATAATTCAAGG+GGG | - | chr7_3:82640568-82640587 | None:intergenic | 20.0% |
| !! | ATTTATTACAAATAAACCAG+TGG | + | chr7_3:82640577-82640596 | Msa1130480:intron | 20.0% |
| !! | TTTCTAACAGTCTAAATATT+GGG | - | chr7_3:82641053-82641072 | None:intergenic | 20.0% |
| !!! | GGTATTATTTTTCCTTAAAT+TGG | + | chr7_3:82641183-82641202 | Msa1130480:intron | 20.0% |
| !!! | CATTTTTTTTAAATGACATC+CGG | - | chr7_3:82641215-82641234 | None:intergenic | 20.0% |
| !! | TTTATGATAGAACATTATGA+CGG | + | chr7_3:82641552-82641571 | Msa1130480:intron | 20.0% |
| ! | ATTTCTTTGTAGAAAGAAAG+TGG | + | chr7_3:82638443-82638462 | Msa1130480:CDS | 25.0% |
| ! | TTTCTTTGTAGAAAGAAAGT+GGG | + | chr7_3:82638444-82638463 | Msa1130480:CDS | 25.0% |
| ! | ATTGTTATGTATGATGCTAT+TGG | + | chr7_3:82638601-82638620 | Msa1130480:CDS | 25.0% |
| !! | ATTTCATAAGTTCTCTAAGA+TGG | - | chr7_3:82638902-82638921 | None:intergenic | 25.0% |
| !!! | TAAGTTTTGTGAGATTGTTT+GGG | - | chr7_3:82638982-82639001 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGAGATTGTT+TGG | - | chr7_3:82638983-82639002 | None:intergenic | 25.0% |
| ! | CTAACTCAAAGAATATTAAG+AGG | + | chr7_3:82639211-82639230 | Msa1130480:intron | 25.0% |
| ! | TCAAAGAATATTAAGAGGTT+AGG | + | chr7_3:82639216-82639235 | Msa1130480:intron | 25.0% |
| ! | TTGCAAGAATTTGCAATAAT+AGG | - | chr7_3:82639553-82639572 | None:intergenic | 25.0% |
| ! | ATTATAGAATAAAGGACGAA+GGG | - | chr7_3:82639663-82639682 | None:intergenic | 25.0% |
| ! | TATTATAGAATAAAGGACGA+AGG | - | chr7_3:82639664-82639683 | None:intergenic | 25.0% |
| ! | AATAGCAGGTTAAAAATCAA+TGG | - | chr7_3:82639716-82639735 | None:intergenic | 25.0% |
| ! | GTAACATAATCTCTTTAGTT+TGG | + | chr7_3:82639993-82640012 | Msa1130480:intron | 25.0% |
| ! | TTGAATTAGGTTTGAATCTT+TGG | + | chr7_3:82640192-82640211 | Msa1130480:intron | 25.0% |
| ! | TTATATCTCAATTTGAGAAC+TGG | + | chr7_3:82640241-82640260 | Msa1130480:intron | 25.0% |
| ! | CTTACTAATGTCCAAAAATA+TGG | - | chr7_3:82640286-82640305 | None:intergenic | 25.0% |
| ! | TTAGTAAGATATTTCCCATA+AGG | + | chr7_3:82640298-82640317 | Msa1130480:intron | 25.0% |
| ! | GAAGTTAAACAAAAATGAAC+TGG | + | chr7_3:82640394-82640413 | Msa1130480:intron | 25.0% |
| !!! | ATATGGTTGGTAAATTTCTT+AGG | - | chr7_3:82640516-82640535 | None:intergenic | 25.0% |
| ! | TTCAAAATACTGAATATGGT+TGG | - | chr7_3:82640529-82640548 | None:intergenic | 25.0% |
| ! | AAATAAACCAGTGGAAAAAA+GGG | + | chr7_3:82640586-82640605 | Msa1130480:intron | 25.0% |
| ! | CAAACAATCTCATCATAATT+GGG | - | chr7_3:82640645-82640664 | None:intergenic | 25.0% |
| ! | GTAAAATTTAGTCACAAACA+GGG | - | chr7_3:82640744-82640763 | None:intergenic | 25.0% |
| !!! | ATGAGGTTTTAGATATAACA+TGG | - | chr7_3:82640870-82640889 | None:intergenic | 25.0% |
| ! | CAACATCCACAAAAAATAAA+GGG | - | chr7_3:82640912-82640931 | None:intergenic | 25.0% |
| ! | TCAACATCCACAAAAAATAA+AGG | - | chr7_3:82640913-82640932 | None:intergenic | 25.0% |
| ! | GTTTCTAACAGTCTAAATAT+TGG | - | chr7_3:82641054-82641073 | None:intergenic | 25.0% |
| ! | AATGAAGAAACATAGTTCAA+GGG | - | chr7_3:82641082-82641101 | None:intergenic | 25.0% |
| ! | AACTATGTTTCTTCATTGAT+AGG | + | chr7_3:82641085-82641104 | Msa1130480:intron | 25.0% |
| ! | AAAAAAATGTATATGCTTGG+TGG | + | chr7_3:82641226-82641245 | Msa1130480:intron | 25.0% |
| ! | TTTCAAACTAACAAAAGACT+GGG | - | chr7_3:82641369-82641388 | None:intergenic | 25.0% |
| ! | AGAAATACATAAAATGCAGA+TGG | - | chr7_3:82641407-82641426 | None:intergenic | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | - | chr7_3:82641825-82641844 | None:intergenic | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | - | chr7_3:82641829-82641848 | None:intergenic | 25.0% |
| !! | GTTATTGTTGTATTTCTGTA+GGG | + | chr7_3:82642015-82642034 | Msa1130480:intron | 25.0% |
| !! | TGTTGTTGTTGTATTTATGT+AGG | + | chr7_3:82642121-82642140 | Msa1130480:intron | 25.0% |
| !! | GTTGTTGTTGTATTTATGTA+GGG | + | chr7_3:82642122-82642141 | Msa1130480:intron | 25.0% |
| !!! | TTTAGCTTTCTTTCACTAAT+TGG | - | chr7_3:82642323-82642342 | None:intergenic | 25.0% |
| ! | AATTAGTGAAAGAAAGCTAA+AGG | + | chr7_3:82642322-82642341 | Msa1130480:CDS | 25.0% |
| !! | ACTTAGGATTATTGATTGAT+AGG | + | chr7_3:82642452-82642471 | Msa1130480:three_prime_UTR | 25.0% |
| !! | CTTAGGATTATTGATTGATA+GGG | + | chr7_3:82642453-82642472 | Msa1130480:three_prime_UTR | 25.0% |
| !! | TTAGGATTATTGATTGATAG+GGG | + | chr7_3:82642454-82642473 | Msa1130480:three_prime_UTR | 25.0% |
| ! | ATTCTATTCTAGCTAACTCA+TGG | + | chr7_3:82638021-82638040 | Msa1130480:exon | 30.0% |
| ATAAGATTGAGAACAAGAAG+TGG | - | chr7_3:82638128-82638147 | None:intergenic | 30.0% | |
| ! | TCTTTGGGAATTATCTGAAT+TGG | - | chr7_3:82638173-82638192 | None:intergenic | 30.0% |
| ATTCCCAAAGAAACCATAAT+TGG | + | chr7_3:82638182-82638201 | Msa1130480:CDS | 30.0% | |
| TTCCCAAAGAAACCATAATT+GGG | + | chr7_3:82638183-82638202 | Msa1130480:CDS | 30.0% | |
| AACCCAATTATGGTTTCTTT+GGG | - | chr7_3:82638188-82638207 | None:intergenic | 30.0% | |
| AAACCCAATTATGGTTTCTT+TGG | - | chr7_3:82638189-82638208 | None:intergenic | 30.0% | |
| ! | TTCATCGGAAACTTTCTTTT+TGG | - | chr7_3:82638257-82638276 | None:intergenic | 30.0% |
| ! | CAAGTAACAACACTTTTCAT+CGG | - | chr7_3:82638272-82638291 | None:intergenic | 30.0% |
| ! | AAGTGTTGTTACTTGCAAAA+CGG | + | chr7_3:82638277-82638296 | Msa1130480:CDS | 30.0% |
| TATTTGAGCTGCTTATTTAC+TGG | - | chr7_3:82639007-82639026 | None:intergenic | 30.0% | |
| !! | TGAATCTAGCTCTAATGAAA+AGG | + | chr7_3:82639630-82639649 | Msa1130480:intron | 30.0% |
| !! | TGTGCACTACTTTTGAATTA+TGG | + | chr7_3:82639780-82639799 | Msa1130480:intron | 30.0% |
| ! | AATTTTCACATGACTAGAGT+AGG | + | chr7_3:82640124-82640143 | Msa1130480:intron | 30.0% |
| TATACTCAGCATTCATTTAG+TGG | + | chr7_3:82640149-82640168 | Msa1130480:intron | 30.0% | |
| TGGCAAATAATGAATTAGCT+AGG | + | chr7_3:82640169-82640188 | Msa1130480:intron | 30.0% | |
| ! | TGAATTAGCTAGGTTGAATT+AGG | + | chr7_3:82640179-82640198 | Msa1130480:intron | 30.0% |
| ! | GAATTCACCAACCATATTTT+TGG | + | chr7_3:82640272-82640291 | Msa1130480:intron | 30.0% |
| CTAATGTCCAAAAATATGGT+TGG | - | chr7_3:82640282-82640301 | None:intergenic | 30.0% | |
| CAAATAAACCAGTGGAAAAA+AGG | + | chr7_3:82640585-82640604 | Msa1130480:intron | 30.0% | |
| ! | CAGTATACAGTTTTGCAATT+TGG | + | chr7_3:82640616-82640635 | Msa1130480:intron | 30.0% |
| GCAAACAATCTCATCATAAT+TGG | - | chr7_3:82640646-82640665 | None:intergenic | 30.0% | |
| TGAACCATATAGCTAAGTTA+TGG | + | chr7_3:82640689-82640708 | Msa1130480:intron | 30.0% | |
| CTTTCCATAACTTAGCTATA+TGG | - | chr7_3:82640696-82640715 | None:intergenic | 30.0% | |
| CGTAAAATTTAGTCACAAAC+AGG | - | chr7_3:82640745-82640764 | None:intergenic | 30.0% | |
| TTACGCGTTCATATAATCAT+TGG | + | chr7_3:82640760-82640779 | Msa1130480:intron | 30.0% | |
| TACGCGTTCATATAATCATT+GGG | + | chr7_3:82640761-82640780 | Msa1130480:intron | 30.0% | |
| TTAGATATAACATGGAGATG+AGG | - | chr7_3:82640862-82640881 | None:intergenic | 30.0% | |
| !! | TTTGTTGATTTGCGAATACT+TGG | + | chr7_3:82640974-82640993 | Msa1130480:intron | 30.0% |
| ATGAAGAAACATAGTTCAAG+GGG | - | chr7_3:82641081-82641100 | None:intergenic | 30.0% | |
| CAATGAAGAAACATAGTTCA+AGG | - | chr7_3:82641083-82641102 | None:intergenic | 30.0% | |
| TTCCTTAAATTGGAAAGAAC+CGG | + | chr7_3:82641193-82641212 | Msa1130480:intron | 30.0% | |
| GTTTCAAACTAACAAAAGAC+TGG | - | chr7_3:82641370-82641389 | None:intergenic | 30.0% | |
| TTGTACAGAAATGATCACTT+GGG | + | chr7_3:82641468-82641487 | Msa1130480:intron | 30.0% | |
| CAAAAAACATTAGAGTAAGC+TGG | - | chr7_3:82641504-82641523 | None:intergenic | 30.0% | |
| ! | GTTAGTATTTCTGTAGTGTT+AGG | + | chr7_3:82641523-82641542 | Msa1130480:intron | 30.0% |
| ATTTCTGTAGTGTTAGGATA+TGG | + | chr7_3:82641529-82641548 | Msa1130480:intron | 30.0% | |
| CTAAAAAATTGTATTGGAGG+AGG | - | chr7_3:82641826-82641845 | None:intergenic | 30.0% | |
| GGGGAACTAAAAAATTGTAT+TGG | - | chr7_3:82641832-82641851 | None:intergenic | 30.0% | |
| ATACTAAACTCTCCTCATTT+GGG | - | chr7_3:82641853-82641872 | None:intergenic | 30.0% | |
| AATACTAAACTCTCCTCATT+TGG | - | chr7_3:82641854-82641873 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | - | chr7_3:82641911-82641930 | None:intergenic | 30.0% | |
| ! | GGTTATTGTTGTATTTCTGT+AGG | + | chr7_3:82642014-82642033 | Msa1130480:intron | 30.0% |
| TGTTGTATTTATGTAGGGTT+AGG | + | chr7_3:82642127-82642146 | Msa1130480:intron | 30.0% | |
| GTTGTATTTATGTAGGGTTA+GGG | + | chr7_3:82642128-82642147 | Msa1130480:intron | 30.0% | |
| TTGTATTTATGTAGGGTTAG+GGG | + | chr7_3:82642129-82642148 | Msa1130480:intron | 30.0% | |
| !!! | AGATCTATTGTCATTTTGTC+TGG | + | chr7_3:82642180-82642199 | Msa1130480:intron | 30.0% |
| CAGCATGAGTATAATGTAAA+TGG | + | chr7_3:82642578-82642597 | Msa1130480:three_prime_UTR | 30.0% | |
| !!! | AATGGAGATTTTTTTTCCTC+CGG | + | chr7_3:82642596-82642615 | Msa1130480:three_prime_UTR | 30.0% |
| GGACCATTTATATTTACTAC+CGG | - | chr7_3:82642618-82642637 | None:intergenic | 30.0% | |
| AAGTGAAAGGACAATGATGA+TGG | - | chr7_3:82638079-82638098 | None:intergenic | 35.0% | |
| TGAGAACAAGAAGTGGAAAT+GGG | - | chr7_3:82638121-82638140 | None:intergenic | 35.0% | |
| TTGAGAACAAGAAGTGGAAA+TGG | - | chr7_3:82638122-82638141 | None:intergenic | 35.0% | |
| AAGGGAATGAAACCCAATTA+TGG | - | chr7_3:82638198-82638217 | None:intergenic | 35.0% | |
| GTTTGATTGTTTGCGCAAAA+GGG | - | chr7_3:82638216-82638235 | None:intergenic | 35.0% | |
| TGTTTGATTGTTTGCGCAAA+AGG | - | chr7_3:82638217-82638236 | None:intergenic | 35.0% | |
| !! | TCAAACCCAACTTTTGTTTC+TGG | + | chr7_3:82638376-82638395 | Msa1130480:CDS | 35.0% |
| !! | CAAACCCAACTTTTGTTTCT+GGG | + | chr7_3:82638377-82638396 | Msa1130480:CDS | 35.0% |
| ACAACCCAGAAACAAAAGTT+GGG | - | chr7_3:82638384-82638403 | None:intergenic | 35.0% | |
| AACAACCCAGAAACAAAAGT+TGG | - | chr7_3:82638385-82638404 | None:intergenic | 35.0% | |
| !!! | TGTTGCTGATTCTCTTTTTC+CGG | + | chr7_3:82638558-82638577 | Msa1130480:CDS | 35.0% |
| ! | TTCTCTTTTTCCGGTTTCTT+TGG | + | chr7_3:82638567-82638586 | Msa1130480:CDS | 35.0% |
| ! | TCTCTTTTTCCGGTTTCTTT+GGG | + | chr7_3:82638568-82638587 | Msa1130480:CDS | 35.0% |
| ! | ATCCAATTTTACATCCTCTC+CGG | - | chr7_3:82639061-82639080 | None:intergenic | 35.0% |
| TGACAAAATCTGCATAGCTA+TGG | + | chr7_3:82639172-82639191 | Msa1130480:intron | 35.0% | |
| TATTAAGAGGTTAGGACTCT+AGG | + | chr7_3:82639224-82639243 | Msa1130480:intron | 35.0% | |
| CACATAGAATTGTGAGTTTG+AGG | + | chr7_3:82639314-82639333 | Msa1130480:intron | 35.0% | |
| CCATTCAACTGTTGCATATT+GGG | - | chr7_3:82639372-82639391 | None:intergenic | 35.0% | |
| ACCATTCAACTGTTGCATAT+TGG | - | chr7_3:82639373-82639392 | None:intergenic | 35.0% | |
| TAGTGCACAAAACATTAACC+TGG | + | chr7_3:82639413-82639432 | Msa1130480:intron | 35.0% | |
| AGTACAACATGGTTCACATT+TGG | - | chr7_3:82639476-82639495 | None:intergenic | 35.0% | |
| GTTAGATTCATTCACCTTGT+TGG | - | chr7_3:82639589-82639608 | None:intergenic | 35.0% | |
| AGCATAAGAAAGAGAATAGC+AGG | - | chr7_3:82639730-82639749 | None:intergenic | 35.0% | |
| CTCTTTCTTATGCTTAGTTG+TGG | + | chr7_3:82639736-82639755 | Msa1130480:intron | 35.0% | |
| AGTTATATCACTTAGAAGCC+AGG | - | chr7_3:82640075-82640094 | None:intergenic | 35.0% | |
| ! | AATTTGAGAACTGGTTCCTA+GGG | + | chr7_3:82640250-82640269 | Msa1130480:intron | 35.0% |
| TCACATACTCAGCATTCATT+TGG | + | chr7_3:82640369-82640388 | Msa1130480:intron | 35.0% | |
| ! | TGATGAAAGCTTCTGACTTT+TGG | - | chr7_3:82640449-82640468 | None:intergenic | 35.0% |
| ! | TCATTTTCCCTTTTTTCCAC+TGG | - | chr7_3:82640596-82640615 | None:intergenic | 35.0% |
| ATAGCTAAGTTATGGAAAGC+TGG | + | chr7_3:82640697-82640716 | Msa1130480:intron | 35.0% | |
| ATTGGGAGTCAAAATGATGA+TGG | + | chr7_3:82640778-82640797 | Msa1130480:intron | 35.0% | |
| ! | CTGAAGGAAGCTAAACATTT+TGG | + | chr7_3:82640823-82640842 | Msa1130480:intron | 35.0% |
| AAAAAATAAAGGGACCTCCA+AGG | - | chr7_3:82640902-82640921 | None:intergenic | 35.0% | |
| TGAAGAAACATAGTTCAAGG+GGG | - | chr7_3:82641080-82641099 | None:intergenic | 35.0% | |
| GTATAATGACAGTAAGATCG+AGG | + | chr7_3:82641162-82641181 | Msa1130480:intron | 35.0% | |
| ATCCGGTTCTTTCCAATTTA+AGG | - | chr7_3:82641198-82641217 | None:intergenic | 35.0% | |
| CTAGTCCACATATAGACATT+AGG | - | chr7_3:82641312-82641331 | None:intergenic | 35.0% | |
| GTGCTCCTAAATTATCAGTT+AGG | + | chr7_3:82641331-82641350 | Msa1130480:intron | 35.0% | |
| TCACGCCTAACTGATAATTT+AGG | - | chr7_3:82641339-82641358 | None:intergenic | 35.0% | |
| ATTTCAAGCATCTCTTGCTA+AGG | + | chr7_3:82641445-82641464 | Msa1130480:intron | 35.0% | |
| GTTGTACAGAAATGATCACT+TGG | + | chr7_3:82641467-82641486 | Msa1130480:intron | 35.0% | |
| GTGGAAAATATGAGGGAAAA+TGG | + | chr7_3:82641652-82641671 | Msa1130480:intron | 35.0% | |
| !!! | TTTTTTAGTTCCCCCAAATG+AGG | + | chr7_3:82641838-82641857 | Msa1130480:intron | 35.0% |
| TACTAAACTCTCCTCATTTG+GGG | - | chr7_3:82641852-82641871 | None:intergenic | 35.0% | |
| AGAAATAGAGGAAAATGGGA+GGG | - | chr7_3:82641907-82641926 | None:intergenic | 35.0% | |
| AAGAAATAGAGGAAAATGGG+AGG | - | chr7_3:82641908-82641927 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | - | chr7_3:82641912-82641931 | None:intergenic | 35.0% | |
| GGATCTCTAATGCAAATGAT+GGG | + | chr7_3:82642150-82642169 | Msa1130480:intron | 35.0% | |
| TGACCAGAAAATTGTGTGTA+TGG | + | chr7_3:82642248-82642267 | Msa1130480:intron | 35.0% | |
| AGAAAGCTAAAGGAACTTCT+TGG | + | chr7_3:82642332-82642351 | Msa1130480:CDS | 35.0% | |
| GGTAATATAATGCAACCTTC+TGG | + | chr7_3:82642491-82642510 | Msa1130480:three_prime_UTR | 35.0% | |
| GTGCTTGAATGATGAATACA+GGG | - | chr7_3:82642544-82642563 | None:intergenic | 35.0% | |
| TGTGCTTGAATGATGAATAC+AGG | - | chr7_3:82642545-82642564 | None:intergenic | 35.0% | |
| CCATTTATATTTACTACCGG+AGG | - | chr7_3:82642615-82642634 | None:intergenic | 35.0% | |
| CCTCCGGTAGTAAATATAAA+TGG | + | chr7_3:82642612-82642631 | Msa1130480:three_prime_UTR | 35.0% | |
| GAAGTTTGGAAGTTAGAGGA+AGG | - | chr7_3:82638057-82638076 | None:intergenic | 40.0% | |
| GATGGAAGTTTGGAAGTTAG+AGG | - | chr7_3:82638061-82638080 | None:intergenic | 40.0% | |
| !! | GGACAATGATGATGGAAGTT+TGG | - | chr7_3:82638071-82638090 | None:intergenic | 40.0% |
| ! | GGTGTTGAAGTGAAAGTGAA+AGG | - | chr7_3:82638092-82638111 | None:intergenic | 40.0% |
| ! | TGTTGTTACTTGCAAAACGG+AGG | + | chr7_3:82638280-82638299 | Msa1130480:CDS | 40.0% |
| TTACTTGCAAAACGGAGGTT+TGG | + | chr7_3:82638285-82638304 | Msa1130480:CDS | 40.0% | |
| TACTTGCAAAACGGAGGTTT+GGG | + | chr7_3:82638286-82638305 | Msa1130480:CDS | 40.0% | |
| !! | GGTCAAGATTAGTCCTTTTG+TGG | + | chr7_3:82638342-82638361 | Msa1130480:CDS | 40.0% |
| ! | TAGTCCTTTTGTGGCTACAT+TGG | + | chr7_3:82638351-82638370 | Msa1130480:CDS | 40.0% |
| TTGAGATTGTTCTGTGCTTC+TGG | + | chr7_3:82638469-82638488 | Msa1130480:CDS | 40.0% | |
| ! | CTCTTTTTCCGGTTTCTTTG+GGG | + | chr7_3:82638569-82638588 | Msa1130480:CDS | 40.0% |
| AGACTAAACCCCAAAGAAAC+CGG | - | chr7_3:82638580-82638599 | None:intergenic | 40.0% | |
| !! | ATTGGTGTTAGAAGACATGC+TGG | + | chr7_3:82638619-82638638 | Msa1130480:CDS | 40.0% |
| CATTTGCTTGAGCTTCTGTT+TGG | + | chr7_3:82638728-82638747 | Msa1130480:intron | 40.0% | |
| CCCAATATGCAACAGTTGAA+TGG | + | chr7_3:82639369-82639388 | Msa1130480:intron | 40.0% | |
| !! | ATTCACCTTGTTGGCTTGTT+GGG | - | chr7_3:82639580-82639599 | None:intergenic | 40.0% |
| CATTAGAGCTAGATTCAGCT+AGG | - | chr7_3:82639627-82639646 | None:intergenic | 40.0% | |
| GGTCAAACTGACAAATGACA+AGG | - | chr7_3:82639695-82639714 | None:intergenic | 40.0% | |
| ! | GTTGTGATTAGTTATGCGCA+AGG | - | chr7_3:82640022-82640041 | None:intergenic | 40.0% |
| ! | CAATTTGAGAACTGGTTCCT+AGG | + | chr7_3:82640249-82640268 | Msa1130480:intron | 40.0% |
| !! | ATATGGTTGGTGAATTCCCT+AGG | - | chr7_3:82640269-82640288 | None:intergenic | 40.0% |
| GATATTTCCCATAAGGCTGA+AGG | + | chr7_3:82640305-82640324 | Msa1130480:intron | 40.0% | |
| ! | TCGTTGGAAGCATATGGATA+TGG | + | chr7_3:82640331-82640350 | Msa1130480:intron | 40.0% |
| ! | CGTTGGAAGCATATGGATAT+GGG | + | chr7_3:82640332-82640351 | Msa1130480:intron | 40.0% |
| CATACTCAGCATTCATTTGG+TGG | + | chr7_3:82640372-82640391 | Msa1130480:intron | 40.0% | |
| ! | AATGAACTGGGTTGAACCTT+TGG | + | chr7_3:82640407-82640426 | Msa1130480:intron | 40.0% |
| AACCTCATAAACATCCACCT+TGG | + | chr7_3:82640882-82640901 | Msa1130480:intron | 40.0% | |
| !!! | GGAGGTCCCTTTATTTTTTG+TGG | + | chr7_3:82640903-82640922 | Msa1130480:intron | 40.0% |
| !! | TACTTGGTTTTCTCCTGTCT+TGG | + | chr7_3:82640990-82641009 | Msa1130480:intron | 40.0% |
| AAATTCATAGCCACCAAGAC+AGG | - | chr7_3:82641006-82641025 | None:intergenic | 40.0% | |
| !!! | GCTTTTGAAGCAGACTACTT+TGG | + | chr7_3:82641131-82641150 | Msa1130480:intron | 40.0% |
| TCGTGCCTAATGTCTATATG+TGG | + | chr7_3:82641304-82641323 | Msa1130480:intron | 40.0% | |
| GCAGATGGAGAAAGATATGT+TGG | - | chr7_3:82641392-82641411 | None:intergenic | 40.0% | |
| TCGCAAACAAAGCCTAAGTT+GGG | - | chr7_3:82641598-82641617 | None:intergenic | 40.0% | |
| !! | TTAGGCTTTGTTTGCGAGTT+TGG | + | chr7_3:82641601-82641620 | Msa1130480:intron | 40.0% |
| TTTGAGGGGTGGAAAATATG+AGG | + | chr7_3:82641644-82641663 | Msa1130480:intron | 40.0% | |
| TTGAGGGGTGGAAAATATGA+GGG | + | chr7_3:82641645-82641664 | Msa1130480:intron | 40.0% | |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | - | chr7_3:82641818-82641837 | None:intergenic | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr7_3:82641819-82641838 | None:intergenic | 40.0% |
| ACTAAACTCTCCTCATTTGG+GGG | - | chr7_3:82641851-82641870 | None:intergenic | 40.0% | |
| GAAATAGAGGAAAATGGGAG+GGG | - | chr7_3:82641906-82641925 | None:intergenic | 40.0% | |
| TGAGCAAGTGGAAGAAATAG+AGG | - | chr7_3:82641919-82641938 | None:intergenic | 40.0% | |
| GGAAAAAAGGAATGAGCAAG+TGG | - | chr7_3:82641931-82641950 | None:intergenic | 40.0% | |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | - | chr7_3:82641977-82641996 | None:intergenic | 40.0% |
| AACAAAGCCTTAGTGGGATA+AGG | + | chr7_3:82641985-82642004 | Msa1130480:intron | 40.0% | |
| ! | AAGTCTTATCCCACTAAGTG+GGG | - | chr7_3:82642095-82642114 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCCCACTAAGT+GGG | - | chr7_3:82642096-82642115 | None:intergenic | 40.0% |
| GGGATCTCTAATGCAAATGA+TGG | + | chr7_3:82642149-82642168 | Msa1130480:intron | 40.0% | |
| !! | GTCATTTTGTCTGGATTCTG+TGG | + | chr7_3:82642189-82642208 | Msa1130480:intron | 40.0% |
| ! | CAGCCATACACACAATTTTC+TGG | - | chr7_3:82642254-82642273 | None:intergenic | 40.0% |
| CAGAAAATTGTGTGTATGGC+TGG | + | chr7_3:82642252-82642271 | Msa1130480:intron | 40.0% | |
| ACAGGTGCTTAACATGATTC+TGG | + | chr7_3:82642277-82642296 | Msa1130480:intron | 40.0% | |
| ! | ATTCTGGCTGACATGTTTCA+AGG | + | chr7_3:82642293-82642312 | Msa1130480:CDS | 40.0% |
| ! | TTCTGGCTGACATGTTTCAA+GGG | + | chr7_3:82642294-82642313 | Msa1130480:CDS | 40.0% |
| GGCTACTAAAAATCCAAGCA+GGG | - | chr7_3:82642387-82642406 | None:intergenic | 40.0% | |
| AGGCTACTAAAAATCCAAGC+AGG | - | chr7_3:82642388-82642407 | None:intergenic | 40.0% | |
| ATAGGGGATACTATTTGCTC+TGG | + | chr7_3:82642470-82642489 | Msa1130480:three_prime_UTR | 40.0% | |
| GGTACGTTTCATATACCAGA+AGG | - | chr7_3:82642509-82642528 | None:intergenic | 40.0% | |
| ! | AATACAGGGCACTAACTATG+CGG | - | chr7_3:82642530-82642549 | None:intergenic | 40.0% |
| AGAAGTGGAAATGGGTCTGA+GGG | - | chr7_3:82638113-82638132 | None:intergenic | 45.0% | |
| AAGAAGTGGAAATGGGTCTG+AGG | - | chr7_3:82638114-82638133 | None:intergenic | 45.0% | |
| ATGCGTAACGACGAATGCAA+AGG | + | chr7_3:82638321-82638340 | Msa1130480:CDS | 45.0% | |
| GAAGCCAATGTAGCCACAAA+AGG | - | chr7_3:82638358-82638377 | None:intergenic | 45.0% | |
| !! | TTGTTTCTGGGTTGTTTGCG+TGG | + | chr7_3:82638389-82638408 | Msa1130480:CDS | 45.0% |
| AGATTGTTCTGTGCTTCTGG+AGG | + | chr7_3:82638472-82638491 | Msa1130480:CDS | 45.0% | |
| GATTGTTCTGTGCTTCTGGA+GGG | + | chr7_3:82638473-82638492 | Msa1130480:CDS | 45.0% | |
| CATAGCGCAGAATGAGAAGA+AGG | - | chr7_3:82638502-82638521 | None:intergenic | 45.0% | |
| ACTTCAGTTGCTCTCTGTCA+TGG | + | chr7_3:82638535-82638554 | Msa1130480:CDS | 45.0% | |
| ATCCAAACATGTCCTCAGTG+TGG | + | chr7_3:82639032-82639051 | Msa1130480:intron | 45.0% | |
| GACCGGAGAGGATGTAAAAT+TGG | + | chr7_3:82639056-82639075 | Msa1130480:intron | 45.0% | |
| AAACAAGTGCTACAACTGCC+AGG | - | chr7_3:82639434-82639453 | None:intergenic | 45.0% | |
| GGTTGAGACTCAGTACAACA+TGG | - | chr7_3:82639487-82639506 | None:intergenic | 45.0% | |
| TGACTTCATTTATGCCGGGA+GGG | - | chr7_3:82639508-82639527 | None:intergenic | 45.0% | |
| TCCCGGCATAAATGAAGTCA+CGG | + | chr7_3:82639508-82639527 | Msa1130480:intron | 45.0% | |
| TGCCGTGACTTCATTTATGC+CGG | - | chr7_3:82639513-82639532 | None:intergenic | 45.0% | |
| ATGAACCCAACAAGCCAACA+AGG | + | chr7_3:82639572-82639591 | Msa1130480:intron | 45.0% | |
| !! | CATTCACCTTGTTGGCTTGT+TGG | - | chr7_3:82639581-82639600 | None:intergenic | 45.0% |
| GAATAAAGGACGAAGGGACT+AGG | - | chr7_3:82639657-82639676 | None:intergenic | 45.0% | |
| GTGAACTCTTACGAGTCTAC+TGG | + | chr7_3:82639937-82639956 | Msa1130480:intron | 45.0% | |
| TTGCAACAAAGCTGTTCACC+TGG | + | chr7_3:82640054-82640073 | Msa1130480:intron | 45.0% | |
| ! | ACGAACACCTTCAGCCTTAT+GGG | - | chr7_3:82640315-82640334 | None:intergenic | 45.0% |
| AACGAACACCTTCAGCCTTA+TGG | - | chr7_3:82640316-82640335 | None:intergenic | 45.0% | |
| !! | ATAAGGCTGAAGGTGTTCGT+TGG | + | chr7_3:82640315-82640334 | Msa1130480:intron | 45.0% |
| ! | AGGTGTTCGTTGGAAGCATA+TGG | + | chr7_3:82640325-82640344 | Msa1130480:intron | 45.0% |
| CTCCAAGGTGGATGTTTATG+AGG | - | chr7_3:82640887-82640906 | None:intergenic | 45.0% | |
| CTCATAAACATCCACCTTGG+AGG | + | chr7_3:82640885-82640904 | Msa1130480:intron | 45.0% | |
| AAATAAAGGGACCTCCAAGG+TGG | - | chr7_3:82640899-82640918 | None:intergenic | 45.0% | |
| !! | TTGGTTTTCTCCTGTCTTGG+TGG | + | chr7_3:82640993-82641012 | Msa1130480:intron | 45.0% |
| ! | AAACAAAGCCTAAGTTGGGG+CGG | - | chr7_3:82641594-82641613 | None:intergenic | 45.0% |
| CGCAAACAAAGCCTAAGTTG+GGG | - | chr7_3:82641597-82641616 | None:intergenic | 45.0% | |
| CTCGCAAACAAAGCCTAAGT+TGG | - | chr7_3:82641599-82641618 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr7_3:82641605-82641624 | Msa1130480:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr7_3:82641606-82641625 | Msa1130480:intron | 45.0% |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | - | chr7_3:82641817-82641836 | None:intergenic | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr7_3:82641606-82641625 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr7_3:82641605-82641624 | None:intergenic | 45.0% |
| ACTCGCAAACAAAGCCTTAG+TGG | + | chr7_3:82641978-82641997 | Msa1130480:intron | 45.0% | |
| CTCGCAAACAAAGCCTTAGT+GGG | + | chr7_3:82641979-82641998 | Msa1130480:intron | 45.0% | |
| ! | CCAAGTCTTATCCCACTAAG+TGG | - | chr7_3:82642097-82642116 | None:intergenic | 45.0% |
| CCACTTAGTGGGATAAGACT+TGG | + | chr7_3:82642094-82642113 | Msa1130480:intron | 45.0% | |
| ACCAGCAAACACTTGAGATG+GGG | - | chr7_3:82642363-82642382 | None:intergenic | 45.0% | |
| CACCAGCAAACACTTGAGAT+GGG | - | chr7_3:82642364-82642383 | None:intergenic | 45.0% | |
| !! | TTAAAATTATTATAGAATAA+AGG | - | chr7_3:82639671-82639690 | None:intergenic | 5.0% |
| GCAAAACGGAGGTTTGGGAA+TGG | + | chr7_3:82638291-82638310 | Msa1130480:CDS | 50.0% | |
| TGGGTTGTTTGCGTGGTTTG+TGG | + | chr7_3:82638396-82638415 | Msa1130480:CDS | 50.0% | |
| CTCCACACTGAGGACATGTT+TGG | - | chr7_3:82639037-82639056 | None:intergenic | 50.0% | |
| GTGACTTCATTTATGCCGGG+AGG | - | chr7_3:82639509-82639528 | None:intergenic | 50.0% | |
| GCCGTGACTTCATTTATGCC+GGG | - | chr7_3:82639512-82639531 | None:intergenic | 50.0% | |
| CTTCAGTCACAGTCACACTG+AGG | - | chr7_3:82640809-82640828 | None:intergenic | 50.0% | |
| CTCAGTGTGACTGTGACTGA+AGG | + | chr7_3:82640807-82640826 | Msa1130480:intron | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr7_3:82641604-82641623 | Msa1130480:intron | 50.0% |
| AGGGGAAGGGAAAGGTTTGA+GGG | + | chr7_3:82641629-82641648 | Msa1130480:intron | 50.0% | |
| !!! | GGGTTTTGGGGGTTTTTGGA+GGG | - | chr7_3:82641805-82641824 | None:intergenic | 50.0% |
| !!! | AGGGTTTTGGGGGTTTTTGG+AGG | - | chr7_3:82641806-82641825 | None:intergenic | 50.0% |
| !!! | AGGAGGGTTTTGGGGGTTTT+TGG | - | chr7_3:82641809-82641828 | None:intergenic | 50.0% |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | - | chr7_3:82641816-82641835 | None:intergenic | 50.0% |
| TAGAGGAAAATGGGAGGGGA+GGG | - | chr7_3:82641902-82641921 | None:intergenic | 50.0% | |
| ATAGAGGAAAATGGGAGGGG+AGG | - | chr7_3:82641903-82641922 | None:intergenic | 50.0% | |
| AGGGGAAGGCTTGGGAAAAA+AGG | - | chr7_3:82641944-82641963 | None:intergenic | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | - | chr7_3:82641967-82641986 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr7_3:82641604-82641623 | None:intergenic | 50.0% |
| AGCCTTAGTGGGATAAGGCT+CGG | + | chr7_3:82641990-82642009 | Msa1130480:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr7_3:82642091-82642110 | None:intergenic | 50.0% | |
| TTGTGTGTATGGCTGGACAC+AGG | + | chr7_3:82642259-82642278 | Msa1130480:intron | 50.0% | |
| ACCCCATCTCAAGTGTTTGC+TGG | + | chr7_3:82642359-82642378 | Msa1130480:CDS | 50.0% | |
| GCACCAGCAAACACTTGAGA+TGG | - | chr7_3:82642365-82642384 | None:intergenic | 50.0% | |
| ACAACCTTGGCAGCAGAAAC+AGG | - | chr7_3:82642408-82642427 | None:intergenic | 50.0% | |
| TGCCAAGGTTGTGTTGTGGT+GGG | + | chr7_3:82642416-82642435 | Msa1130480:CDS | 50.0% | |
| AACCCACCACAACACAACCT+TGG | - | chr7_3:82642421-82642440 | None:intergenic | 50.0% | |
| !! | AGGTTGTGTTGTGGTGGGTT+AGG | + | chr7_3:82642421-82642440 | Msa1130480:CDS | 50.0% |
| !! | TTGTGGTGGGTTAGGTCGTT+AGG | + | chr7_3:82642429-82642448 | Msa1130480:exon | 50.0% |
| GGGTTAGGTCGTTAGGACTT+AGG | + | chr7_3:82642436-82642455 | Msa1130480:exon | 50.0% | |
| ACATGCTGGCATGCAAGCTC+AGG | + | chr7_3:82638633-82638652 | Msa1130480:CDS | 55.0% | |
| CATGTCCTCAGTGTGGAGAC+CGG | + | chr7_3:82639039-82639058 | Msa1130480:intron | 55.0% | |
| GTACTGAGTCTCAACCCTCC+CGG | + | chr7_3:82639491-82639510 | Msa1130480:intron | 55.0% | |
| TGTTTGCGAGTTTGGAGGGG+AGG | + | chr7_3:82641609-82641628 | Msa1130480:intron | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+GGG | + | chr7_3:82641610-82641629 | Msa1130480:intron | 55.0% | |
| TTTGCGAGTTTGGAGGGGAG+GGG | + | chr7_3:82641611-82641630 | Msa1130480:intron | 55.0% | |
| GAGGGGAAGGGAAAGGTTTG+AGG | + | chr7_3:82641628-82641647 | Msa1130480:intron | 55.0% | |
| GGGGAAGGGAAAGGTTTGAG+GGG | + | chr7_3:82641630-82641649 | Msa1130480:intron | 55.0% | |
| GAAGGGAAAGGTTTGAGGGG+TGG | + | chr7_3:82641633-82641652 | Msa1130480:intron | 55.0% | |
| AAATGGGAGGGGAGGGCTTT+GGG | - | chr7_3:82641895-82641914 | None:intergenic | 55.0% | |
| AAAATGGGAGGGGAGGGCTT+TGG | - | chr7_3:82641896-82641915 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | - | chr7_3:82641610-82641629 | None:intergenic | 55.0% | |
| ! | CACCGAGCCTTATCCCACTA+AGG | - | chr7_3:82641995-82642014 | None:intergenic | 55.0% |
| CTTAGTGGGATAAGGCTCGG+TGG | + | chr7_3:82641993-82642012 | Msa1130480:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+CGG | - | chr7_3:82642083-82642102 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr7_3:82642083-82642102 | Msa1130480:intron | 55.0% | |
| !! | GTAGCCTGTTTCTGCTGCCA+AGG | + | chr7_3:82642401-82642420 | Msa1130480:CDS | 55.0% |
| CTGCTGCCAAGGTTGTGTTG+TGG | + | chr7_3:82642412-82642431 | Msa1130480:CDS | 55.0% | |
| CTGCCAAGGTTGTGTTGTGG+TGG | + | chr7_3:82642415-82642434 | Msa1130480:CDS | 55.0% | |
| ! | CCTAAGTTGGGGCGGCTACA+TGG | - | chr7_3:82641586-82641605 | None:intergenic | 60.0% |
| CCATGTAGCCGCCCCAACTT+AGG | + | chr7_3:82641583-82641602 | Msa1130480:intron | 60.0% | |
| GAGTTTGGAGGGGAGGGGAA+GGG | + | chr7_3:82641616-82641635 | Msa1130480:intron | 60.0% | |
| AATGGGAGGGGAGGGCTTTG+GGG | - | chr7_3:82641894-82641913 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | - | chr7_3:82641962-82641981 | None:intergenic | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | - | chr7_3:82641963-82641982 | None:intergenic | 60.0% | |
| GTGTAGCCGACCCCACTTAG+TGG | + | chr7_3:82642082-82642101 | Msa1130480:intron | 60.0% | |
| ! | GTGTTTGCTGGTGCCCTGCT+TGG | + | chr7_3:82642371-82642390 | Msa1130480:CDS | 60.0% |
| CCTCTCCGGTCTCCACACTG+AGG | - | chr7_3:82639047-82639066 | None:intergenic | 65.0% | |
| CCTCAGTGTGGAGACCGGAG+AGG | + | chr7_3:82639044-82639063 | Msa1130480:intron | 65.0% | |
| CGAGTTTGGAGGGGAGGGGA+AGG | + | chr7_3:82641615-82641634 | Msa1130480:intron | 65.0% | |
| TGGAGGGGAGGGGAAGGGAA+AGG | + | chr7_3:82641621-82641640 | Msa1130480:intron | 65.0% | |
| ! | ATGGGAGGGGAGGGCTTTGG+GGG | - | chr7_3:82641893-82641912 | None:intergenic | 65.0% |
| GGGAAGGGAGGGGAAGGCTT+GGG | - | chr7_3:82641952-82641971 | None:intergenic | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | - | chr7_3:82641958-82641977 | None:intergenic | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | - | chr7_3:82641964-82641983 | None:intergenic | 65.0% | |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | - | chr7_3:82641892-82641911 | None:intergenic | 70.0% |
| GGGGAAGGGAGGGGAAGGCT+TGG | - | chr7_3:82641953-82641972 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 82637951 | 82642639 | 82637951 | ID=Msa1130480;Name=Msa1130480 |
| chr7_3 | mRNA | 82637951 | 82642639 | 82637951 | ID=Msa1130480-mRNA-1;Parent=Msa1130480;Name=Msa1130480-mRNA-1;_AED=0.00;_eAED=0.00;_QI=89|1|1|1|1|1|2|197|258 |
| chr7_3 | exon | 82637951 | 82638654 | 82637951 | ID=Msa1130480-mRNA-1:exon:24401;Parent=Msa1130480-mRNA-1 |
| chr7_3 | exon | 82642281 | 82642639 | 82642281 | ID=Msa1130480-mRNA-1:exon:24402;Parent=Msa1130480-mRNA-1 |
| chr7_3 | five_prime_UTR | 82637951 | 82638039 | 82637951 | ID=Msa1130480-mRNA-1:five_prime_utr;Parent=Msa1130480-mRNA-1 |
| chr7_3 | CDS | 82638040 | 82638654 | 82638040 | ID=Msa1130480-mRNA-1:cds;Parent=Msa1130480-mRNA-1 |
| chr7_3 | CDS | 82642281 | 82642442 | 82642281 | ID=Msa1130480-mRNA-1:cds;Parent=Msa1130480-mRNA-1 |
| chr7_3 | three_prime_UTR | 82642443 | 82642639 | 82642443 | ID=Msa1130480-mRNA-1:three_prime_utr;Parent=Msa1130480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
