AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0549740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0549740 MtrunA17_Chr4g0034441 98.661 448 6 0 1 448 1 448 0.0 926
Msa0549740 MtrunA17_Chr4g0034461 87.255 306 38 1 1 306 1 305 0.0 559
Msa0549740 MtrunA17_Chr4g0034471 91.176 136 12 0 313 448 1 136 2.45e-87 262
Msa0549740 MtrunA17_Chr1g0197471 77.536 138 31 0 112 249 92 229 1.07e-69 222
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0549740 AT4G34350.1 77.342 459 88 3 5 448 8 465 0.0 747

Find 125 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGACTTTGAAGGAAAA+TGG 0.141165 4_1:+44915260 Msa0549740:CDS
ATTCTTGGTGGTGAATTTAA+TGG 0.163592 4_1:+44916451 Msa0549740:CDS
CATCATAGACCAATCTATTT+AGG 0.217939 4_1:+44917947 Msa0549740:three_prime_UTR
ATTTAAATTTGCCCTTTCTA+AGG 0.245365 4_1:+44916588 Msa0549740:CDS
AACGCGGAATTCCTTCTTAC+TGG 0.255913 4_1:+44917179 Msa0549740:CDS
TTGTATGCTATTCTGTTTCC+TGG 0.263735 4_1:-44917226 None:intergenic
AGATTCTTACGGAAGAGTTT+TGG 0.268289 4_1:-44914246 None:intergenic
CCACAACCCAACTGTTAATA+AGG 0.284593 4_1:+44915427 Msa0549740:CDS
GATGTTACACCAATCCTTAA+TGG 0.325134 4_1:-44917411 None:intergenic
TTCTACCAAAGGGTCCATTA+AGG 0.329049 4_1:+44917397 Msa0549740:CDS
GTAGTCATACTGCCTGCTTT+TGG 0.349326 4_1:+44915986 Msa0549740:CDS
CAGGATGAACTTGAAATTAC+AGG 0.351003 4_1:+44917815 Msa0549740:three_prime_UTR
TTCATCAGGAAATTGTTTCC+TGG 0.355179 4_1:-44915378 None:intergenic
TGTTTCTTCCCTTCTCCAAT+AGG 0.358071 4_1:-44915938 None:intergenic
AGGACTATGATGCGTAAATA+TGG 0.365077 4_1:+44916808 Msa0549740:CDS
TATGTTTGCGACTATATTCT+TGG 0.365313 4_1:+44916436 Msa0549740:CDS
TCAAGGTGTTTGATTTGAAA+AGG 0.366046 4_1:+44917730 Msa0549740:CDS
CCTTGTGACCAAAGCCTTTG+CGG 0.366949 4_1:-44914290 None:intergenic
AATTATAACCGCAAAGGCTT+TGG 0.372584 4_1:+44914282 Msa0549740:CDS
AAATGCCTCTCTGGTTGAAC+TGG 0.377526 4_1:-44916476 None:intergenic
TCGAATGATAGTACCATTAC+TGG 0.397402 4_1:-44918025 None:intergenic
TTATTAAATGTATAAATAAC+AGG 0.399628 4_1:+44917796 Msa0549740:three_prime_UTR
TTATGTTAGTTGTTGGTGGC+TGG 0.411202 4_1:+44917116 Msa0549740:CDS
GTTCCTCGGCTATCTCTTGT+AGG 0.412759 4_1:-44917159 None:intergenic
CAAGCTGGTGGAGAAAGATA+TGG 0.419899 4_1:+44917090 Msa0549740:CDS
TTAAGACTTTGAAGGAAAAT+GGG 0.420831 4_1:+44915261 Msa0549740:CDS
GAAGTGCAGAATATTCCTAT+TGG 0.422603 4_1:+44915923 Msa0549740:CDS
CAAGGTGTTTGATTTGAAAA+GGG 0.423274 4_1:+44917731 Msa0549740:CDS
TGGGTTGTGGATAATTTCAT+TGG 0.423611 4_1:-44915414 None:intergenic
CATTCGAATATAATGAAAAC+AGG 0.423645 4_1:+44918041 Msa0549740:three_prime_UTR
CCTTATTAACAGTTGGGTTG+TGG 0.426777 4_1:-44915427 None:intergenic
CTCGCGATTCATGAGTTTGA+GGG 0.440623 4_1:-44914319 None:intergenic
AATATACCTTATTAACAGTT+GGG 0.443511 4_1:-44915433 None:intergenic
GAATATACCTTATTAACAGT+TGG 0.443926 4_1:-44915434 None:intergenic
GACTATACCTCGATAATTCA+TGG 0.447725 4_1:+44916232 Msa0549740:CDS
CCAATCCTTAATGGACCCTT+TGG 0.452397 4_1:-44917402 None:intergenic
GGAACGTCGATGCGAGTGGC+GGG 0.452613 4_1:-44914156 None:intergenic
GTGATGCTAGCCGAATCCTT+TGG 0.452734 4_1:+44915311 Msa0549740:CDS
GCAAGAGAAAATACCTTGTC+AGG 0.454180 4_1:-44917447 None:intergenic
CACTTCTTGTGAGATTCTTA+CGG 0.455809 4_1:-44914257 None:intergenic
ATTGACAGCGAGCAAAGAAT+TGG 0.462963 4_1:+44917202 Msa0549740:CDS
TTCAAATTGCTTATGAAGCC+AGG 0.465315 4_1:+44915360 Msa0549740:CDS
CAGTTGCTACGGTTTCCTCA+TGG 0.466058 4_1:-44916264 None:intergenic
ATGGATGATCCTAAATAGAT+TGG 0.466225 4_1:-44917956 None:intergenic
GATCTTATGTTAGTTGTTGG+TGG 0.473078 4_1:+44917112 Msa0549740:CDS
TTTAAATTTGCCCTTTCTAA+GGG 0.475566 4_1:+44916589 Msa0549740:CDS
ATGGATCTTATGTTAGTTGT+TGG 0.478899 4_1:+44917109 Msa0549740:CDS
CACAATTTGTGATGCTACTC+AGG 0.482457 4_1:+44916867 Msa0549740:CDS
CCAACAAAATCCAAAGGATT+CGG 0.483780 4_1:-44915321 None:intergenic
CGGAGAAGAGTTTGCGGCAA+CGG 0.485618 4_1:-44914194 None:intergenic
TTAAGGATTGGTGTAACATC+TGG 0.487090 4_1:+44917414 Msa0549740:CDS
TGACATCATTAAGACTTTGA+AGG 0.488498 4_1:+44915253 Msa0549740:CDS
AACTTGCCCGTGGGTTTCAA+AGG 0.489241 4_1:+44916066 Msa0549740:CDS
GAGTTTGCGGCAACGGAAAG+TGG 0.489819 4_1:-44914187 None:intergenic
CAGAATATTCCTATTGGAGA+AGG 0.491958 4_1:+44915929 Msa0549740:CDS
AAAATGGGTTTGAGTATACA+TGG 0.492239 4_1:+44915276 Msa0549740:CDS
ACAACGCATAAATAGAGAAC+AGG 0.494096 4_1:+44914022 None:intergenic
AGAAGGAATTCCGCGTTCCT+CGG 0.495852 4_1:-44917173 None:intergenic
TCAACTGCGGCTCCAAAAGC+AGG 0.503912 4_1:-44915998 None:intergenic
GACAGTGACCTGGTAAAACT+TGG 0.507138 4_1:+44916622 Msa0549740:CDS
CTTTCAGCATGGTGAGCTTG+TGG 0.510724 4_1:+44917362 Msa0549740:intron
AGCAAAAGATGCAGTTGCTA+CGG 0.513891 4_1:-44916275 None:intergenic
AAAGAAAACTTTCTACCAAA+GGG 0.517497 4_1:+44917387 Msa0549740:CDS
AGTTGCTACGGTTTCCTCAT+GGG 0.518159 4_1:-44916263 None:intergenic
AGAAGGGAAGAAACAATTTG+AGG 0.519363 4_1:+44915946 Msa0549740:CDS
TCATCCATGCATTTGTACTC+TGG 0.521867 4_1:+44917971 Msa0549740:three_prime_UTR
GATGCAGCGGCTAGAGGAGA+TGG 0.525080 4_1:+44915901 Msa0549740:intron
CCGCAAAGGCTTTGGTCACA+AGG 0.525512 4_1:+44914290 Msa0549740:CDS
CTGTCAGGACAGAGACAAAC+GGG 0.526766 4_1:-44914092 None:intergenic
TGTCCTGACAGTATCTTCAA+TGG 0.529422 4_1:+44914104 Msa0549740:exon
ACTCGCGATTCATGAGTTTG+AGG 0.529824 4_1:-44914320 None:intergenic
AAATAGAGAACAGGAGTTTG+CGG 0.529868 4_1:+44914031 None:intergenic
GAAAGAAAACTTTCTACCAA+AGG 0.530120 4_1:+44917386 Msa0549740:CDS
ACAATTTGAGGTTGTCAACA+AGG 0.534141 4_1:+44915958 Msa0549740:CDS
CGTGGAAGATGCTCTTATCA+AGG 0.542913 4_1:+44917713 Msa0549740:CDS
CTGGATCAAAGCCCTTAGAA+AGG 0.544154 4_1:-44916600 None:intergenic
ATGTCTCTATTGACCAGTAA+TGG 0.544999 4_1:+44918012 Msa0549740:three_prime_UTR
AGAAAATACCTTGTCAGGTG+TGG 0.545193 4_1:-44917442 None:intergenic
TGGATCAAAGCCCTTAGAAA+GGG 0.549420 4_1:-44916599 None:intergenic
AATCGGAGTCGGCGGAGCAA+CGG 0.550136 4_1:-44914218 None:intergenic
CCAAAGGGTCCATTAAGGAT+TGG 0.551091 4_1:+44917402 Msa0549740:CDS
ATTCATTTAATATAACATTG+AGG 0.557891 4_1:-44917872 None:intergenic
AGCGAGCAAAGAATTGGTCC+AGG 0.563565 4_1:+44917208 Msa0549740:CDS
GAGCCATTGAAGATACTGTC+AGG 0.564228 4_1:-44914107 None:intergenic
ACTGTCAGGACAGAGACAAA+CGG 0.566093 4_1:-44914093 None:intergenic
AACGGACGGAGAAGAGTTTG+CGG 0.566321 4_1:-44914200 None:intergenic
CAACGGAAAGTGGACGGAGA+AGG 0.568434 4_1:-44914177 None:intergenic
ACAAGATGCTATTTACAAGC+TGG 0.568463 4_1:+44917075 Msa0549740:CDS
AAATCAGACAACAATGCTCA+AGG 0.577136 4_1:+44916651 Msa0549740:CDS
ATGATTGATGCAGCGGCTAG+AGG 0.580973 4_1:+44915895 Msa0549740:intron
TCGCTGTCAATCCAGTAAGA+AGG 0.582364 4_1:-44917190 None:intergenic
AAATGGGTTTGAGTATACAT+GGG 0.586456 4_1:+44915277 Msa0549740:CDS
GAACGTCGATGCGAGTGGCG+GGG 0.586973 4_1:-44914155 None:intergenic
GTTTGCGACTATATTCTTGG+TGG 0.588117 4_1:+44916439 Msa0549740:CDS
CGTTGATACAACTTGCCCGT+GGG 0.588283 4_1:+44916057 Msa0549740:CDS
AGGAACGTCGATGCGAGTGG+CGG 0.589279 4_1:-44914157 None:intergenic
ATAGATACCTTTGAAACCCA+CGG 0.589835 4_1:-44916073 None:intergenic
GCATTTGTACTCTGGCTGCA+AGG 0.598950 4_1:+44917979 Msa0549740:three_prime_UTR
CTTTGATCCAGACAGTGACC+TGG 0.605562 4_1:+44916612 Msa0549740:CDS
TGGTGCATCCACACCTGACA+AGG 0.608493 4_1:+44917434 Msa0549740:CDS
AGTGAGAATTATAACCGCAA+AGG 0.609945 4_1:+44914276 Msa0549740:CDS
CAAGAGATAGCCGAGGAACG+CGG 0.611703 4_1:+44917163 Msa0549740:CDS
TGCGAGTGGCGGGGAGACGT+AGG 0.612473 4_1:-44914146 None:intergenic
TTGCGGCAACGGAAAGTGGA+CGG 0.613001 4_1:-44914183 None:intergenic
GGAGTCGGCGGAGCAACGGA+CGG 0.613935 4_1:-44914214 None:intergenic
AGATGCTATTTACAAGCTGG+TGG 0.615477 4_1:+44917078 Msa0549740:CDS
TCGTTGATACAACTTGCCCG+TGG 0.618282 4_1:+44916056 Msa0549740:CDS
TGGGTCAAAATCGGAGTCGG+CGG 0.619991 4_1:-44914226 None:intergenic
AATCAGACAACAATGCTCAA+GGG 0.621380 4_1:+44916652 Msa0549740:CDS
CAATTTGAGGTTGTCAACAA+GGG 0.624367 4_1:+44915959 Msa0549740:CDS
TAGATACCTTTGAAACCCAC+GGG 0.624793 4_1:-44916072 None:intergenic
AAGGGAGAGACTGAAGAGAT+CGG 0.626047 4_1:+44916670 Msa0549740:CDS
AGAAGGAACGTCGATGCGAG+TGG 0.627790 4_1:-44914160 None:intergenic
AGAATATTCCTATTGGAGAA+GGG 0.631143 4_1:+44915930 Msa0549740:CDS
GCAGCCAGAGTACAAATGCA+TGG 0.635339 4_1:-44917975 None:intergenic
TATGATGCGTAAATATGGCG+TGG 0.636939 4_1:+44916813 Msa0549740:CDS
ATATTTACCATGAATTATCG+AGG 0.639141 4_1:-44916239 None:intergenic
TTATAGGCAGACTAGTGGAG+AGG 0.648372 4_1:+44916788 Msa0549740:intron
TAGATTGGTCTATGATGACA+AGG 0.652639 4_1:-44917941 None:intergenic
CATTACAACTCGTGTAACGT+AGG 0.654962 4_1:+44917760 Msa0549740:exon
TCATGGTAAATATGCCCATG+AGG 0.657612 4_1:+44916249 Msa0549740:CDS
AATGGGTTTGAGTATACATG+GGG 0.674771 4_1:+44915278 Msa0549740:CDS
TGGATCCAGTTCAACCAGAG+AGG 0.678385 4_1:+44916471 Msa0549740:CDS
AGTCAACATCTCGTCAACTG+CGG 0.691748 4_1:-44916011 None:intergenic
ACACCTACAAGAGATAGCCG+AGG 0.737129 4_1:+44917156 Msa0549740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATTTAAATAAACTATAT+GGG - chr4_1:44917603-44917622 None:intergenic 10.0%
!! TGAAATTTAAATAAACTATA+TGG - chr4_1:44917604-44917623 None:intergenic 10.0%
!! TTATTAAATGTATAAATAAC+AGG + chr4_1:44917796-44917815 Msa0549740:three_prime_UTR 10.0%
!! AAAAAGACGTAAAATAAATA+TGG + chr4_1:44915667-44915686 Msa0549740:intron 15.0%
!! AAAAGACGTAAAATAAATAT+GGG + chr4_1:44915668-44915687 Msa0549740:intron 15.0%
!! TAAAATAAATATGGGTATAT+TGG + chr4_1:44915676-44915695 Msa0549740:intron 15.0%
!! ATACATAATTGTGAAAAATA+TGG + chr4_1:44916303-44916322 Msa0549740:CDS 15.0%
!!! CAACTTTTTTATTAGAATAA+TGG - chr4_1:44917032-44917051 None:intergenic 15.0%
!! ATTCATTTAATATAACATTG+AGG - chr4_1:44917875-44917894 None:intergenic 15.0%
!!! CTATATTCTCATAAGTTTTT+CGG + chr4_1:44915001-44915020 Msa0549740:intron 20.0%
!!! TATACACTTTTTGTAATTTC+AGG + chr4_1:44915230-44915249 Msa0549740:intron 20.0%
!! AATTTCCTGATGAAAAAATT+TGG + chr4_1:44915387-44915406 Msa0549740:CDS 20.0%
!! AATATACCTTATTAACAGTT+GGG - chr4_1:44915436-44915455 None:intergenic 20.0%
!! CAATTAATCATGTAAAATGA+CGG - chr4_1:44915857-44915876 None:intergenic 20.0%
!!! TATGTTGTTGATCATTTTAT+AGG + chr4_1:44916772-44916791 Msa0549740:intron 20.0%
!!! TGTGAATCTATAAAAACTTT+TGG + chr4_1:44917476-44917495 Msa0549740:intron 20.0%
!! AGCATTAAAAAAACTTAGAT+TGG - chr4_1:44917664-44917683 None:intergenic 20.0%
! ACATAAGATGAGAAATTTGA+TGG + chr4_1:44914673-44914692 Msa0549740:intron 25.0%
!!! TTTGTTGTTCAATTGATTTG+TGG + chr4_1:44914703-44914722 Msa0549740:intron 25.0%
! TTGTTGAACTTCTTTAGATA+TGG + chr4_1:44914768-44914787 Msa0549740:intron 25.0%
!! CATCTGCTAACATTTTTATT+GGG - chr4_1:44914981-44915000 None:intergenic 25.0%
!!! CAGTCTTATTCAAATAAAGT+CGG - chr4_1:44915063-44915082 None:intergenic 25.0%
!! ATTAAGACTTTGAAGGAAAA+TGG + chr4_1:44915260-44915279 Msa0549740:CDS 25.0%
!! TTAAGACTTTGAAGGAAAAT+GGG + chr4_1:44915261-44915280 Msa0549740:CDS 25.0%
!!! GTAATCCAAATTTTTTCATC+AGG - chr4_1:44915395-44915414 None:intergenic 25.0%
! GAATATACCTTATTAACAGT+TGG - chr4_1:44915437-44915456 None:intergenic 25.0%
! AAAAATTCAGAGATCAATGA+AGG - chr4_1:44915471-44915490 None:intergenic 25.0%
! AAATATGGGTATATTGGTAT+AGG + chr4_1:44915682-44915701 Msa0549740:intron 25.0%
! TATAGGAATAATTGATGTAG+TGG + chr4_1:44915699-44915718 Msa0549740:intron 25.0%
!! ACAAAGAAATTTTCTCAAGA+AGG + chr4_1:44915751-44915770 Msa0549740:intron 25.0%
!! TCAAGAAGGTCTTATATTTA+GGG + chr4_1:44915765-44915784 Msa0549740:intron 25.0%
!!! TTCTTCGATGAATTGTTTTA+AGG + chr4_1:44916177-44916196 Msa0549740:intron 25.0%
! ATATTTACCATGAATTATCG+AGG - chr4_1:44916242-44916261 None:intergenic 25.0%
!! ACAACAATATCTTCAAGTTA+AGG - chr4_1:44916381-44916400 None:intergenic 25.0%
! CAAATAATCACAACATTGAA+GGG - chr4_1:44916551-44916570 None:intergenic 25.0%
! TCAAATAATCACAACATTGA+AGG - chr4_1:44916552-44916571 None:intergenic 25.0%
! ATTTAAATTTGCCCTTTCTA+AGG + chr4_1:44916588-44916607 Msa0549740:CDS 25.0%
! TTTAAATTTGCCCTTTCTAA+GGG + chr4_1:44916589-44916608 Msa0549740:CDS 25.0%
! CTTGATGTTATTGCTTATTT+GGG + chr4_1:44916909-44916928 Msa0549740:intron 25.0%
! AAAGAAAACTTTCTACCAAA+GGG + chr4_1:44917387-44917406 Msa0549740:CDS 25.0%
!! TTTTTATAGATTCACAAGCA+AGG - chr4_1:44917472-44917491 None:intergenic 25.0%
! TTACAAAAAACTAACAAGAG+TGG - chr4_1:44917506-44917525 None:intergenic 25.0%
!! TGTGTAATGAAATATGCTTT+TGG + chr4_1:44917548-44917567 Msa0549740:intron 25.0%
! TATTATCAGCAAAAACTGAA+TGG - chr4_1:44917640-44917659 None:intergenic 25.0%
!!! TAATGCTTATTTTGCATCAT+TGG + chr4_1:44917677-44917696 Msa0549740:intron 25.0%
! CATTCGAATATAATGAAAAC+AGG + chr4_1:44918041-44918060 Msa0549740:three_prime_UTR 25.0%
!!! TTAGCGAAATTGTTTTGACT+TGG - chr4_1:44914387-44914406 None:intergenic 30.0%
TCGCTAATTGAGTTTCTTAT+CGG + chr4_1:44914400-44914419 Msa0549740:intron 30.0%
GAAAGTAACACACTTTATGA+TGG - chr4_1:44914481-44914500 None:intergenic 30.0%
!! AAAGTGTGTTACTTTCTAGT+TGG + chr4_1:44914485-44914504 Msa0549740:intron 30.0%
!! AAGTGTGTTACTTTCTAGTT+GGG + chr4_1:44914486-44914505 Msa0549740:intron 30.0%
! TCAGAGACATTTGAGATTAA+AGG + chr4_1:44914516-44914535 Msa0549740:intron 30.0%
!! AGAAAGTACTTCATAGAGTT+TGG + chr4_1:44914649-44914668 Msa0549740:intron 30.0%
! GCTTATTTGAGTTTATCTAG+TGG + chr4_1:44914837-44914856 Msa0549740:intron 30.0%
! TGACTTATTTGAGTTTATCG+TGG - chr4_1:44914937-44914956 None:intergenic 30.0%
AAATAAGTCAATCCAAACAG+AGG + chr4_1:44914947-44914966 Msa0549740:intron 30.0%
! GCATCTGCTAACATTTTTAT+TGG - chr4_1:44914982-44915001 None:intergenic 30.0%
TATTGAACTAAGGTCTTCTT+TGG - chr4_1:44915174-44915193 None:intergenic 30.0%
TGACATCATTAAGACTTTGA+AGG + chr4_1:44915253-44915272 Msa0549740:CDS 30.0%
! AAAATGGGTTTGAGTATACA+TGG + chr4_1:44915276-44915295 Msa0549740:CDS 30.0%
! AAATGGGTTTGAGTATACAT+GGG + chr4_1:44915277-44915296 Msa0549740:CDS 30.0%
TATATTCCGTCCCTAAATAT+AGG + chr4_1:44915503-44915522 Msa0549740:intron 30.0%
TTTCCATGATTTGACTAAGA+GGG - chr4_1:44915530-44915549 None:intergenic 30.0%
ATTTCCATGATTTGACTAAG+AGG - chr4_1:44915531-44915550 None:intergenic 30.0%
ATAAGTTTATCCATCAAGAG+AGG + chr4_1:44915600-44915619 Msa0549740:intron 30.0%
TAAGTTTATCCATCAAGAGA+GGG + chr4_1:44915601-44915620 Msa0549740:intron 30.0%
! TGATGTAGTGGAAAATTCAA+AGG + chr4_1:44915711-44915730 Msa0549740:intron 30.0%
! GATGTAGTGGAAAATTCAAA+GGG + chr4_1:44915712-44915731 Msa0549740:intron 30.0%
! ATGTAGTGGAAAATTCAAAG+GGG + chr4_1:44915713-44915732 Msa0549740:intron 30.0%
TCAAAGGGGATCTTATAAAA+AGG + chr4_1:44915727-44915746 Msa0549740:intron 30.0%
CAAAGGGGATCTTATAAAAA+GGG + chr4_1:44915728-44915747 Msa0549740:intron 30.0%
! CTCAAGAAGGTCTTATATTT+AGG + chr4_1:44915764-44915783 Msa0549740:intron 30.0%
AGAATATTCCTATTGGAGAA+GGG + chr4_1:44915930-44915949 Msa0549740:CDS 30.0%
!!! CGATGAATTGTTTTAAGGTA+TGG + chr4_1:44916182-44916201 Msa0549740:intron 30.0%
AATTGTGAAAAATATGGCAG+AGG + chr4_1:44916309-44916328 Msa0549740:CDS 30.0%
GCATAATTGAAAATTCATCC+AGG + chr4_1:44916408-44916427 Msa0549740:intron 30.0%
TATGTTTGCGACTATATTCT+TGG + chr4_1:44916436-44916455 Msa0549740:CDS 30.0%
!! ATTCTTGGTGGTGAATTTAA+TGG + chr4_1:44916451-44916470 Msa0549740:CDS 30.0%
!!! ATTTTTTTGCTGTGGAGTTA+AGG + chr4_1:44916697-44916716 Msa0549740:intron 30.0%
!!! TTTTTTTGCTGTGGAGTTAA+GGG + chr4_1:44916698-44916717 Msa0549740:intron 30.0%
CCAAATAAGCAATAACATCA+AGG - chr4_1:44916911-44916930 None:intergenic 30.0%
CCTTGATGTTATTGCTTATT+TGG + chr4_1:44916908-44916927 Msa0549740:intron 30.0%
! AATATGTTTTTCTGTCGCAA+TGG + chr4_1:44916994-44917013 Msa0549740:intron 30.0%
TAGAATAATGGCATACAGAA+TGG - chr4_1:44917020-44917039 None:intergenic 30.0%
GTTGAATTGAATTTCCTTTC+AGG + chr4_1:44917048-44917067 Msa0549740:intron 30.0%
ATGGATCTTATGTTAGTTGT+TGG + chr4_1:44917109-44917128 Msa0549740:CDS 30.0%
ATGTTTACTGTATCAGATCT+TGG - chr4_1:44917287-44917306 None:intergenic 30.0%
! TATCTTTTCATCTTTCAGCA+TGG + chr4_1:44917351-44917370 Msa0549740:intron 30.0%
GAAAGAAAACTTTCTACCAA+AGG + chr4_1:44917386-44917405 Msa0549740:CDS 30.0%
AAAAAACTAACAAGAGTGGA+AGG - chr4_1:44917502-44917521 None:intergenic 30.0%
!! TCAAGGTGTTTGATTTGAAA+AGG + chr4_1:44917730-44917749 Msa0549740:CDS 30.0%
!! CAAGGTGTTTGATTTGAAAA+GGG + chr4_1:44917731-44917750 Msa0549740:CDS 30.0%
!!! CTTCTAAATGTTGCTTTTTG+TGG + chr4_1:44917896-44917915 Msa0549740:three_prime_UTR 30.0%
CATCATAGACCAATCTATTT+AGG + chr4_1:44917947-44917966 Msa0549740:three_prime_UTR 30.0%
ATGGATGATCCTAAATAGAT+TGG - chr4_1:44917959-44917978 None:intergenic 30.0%
!!! GAAGAGTTTTGGGTCAAAAT+CGG - chr4_1:44914238-44914257 None:intergenic 35.0%
! GATTCTTACGGAAGAGTTTT+GGG - chr4_1:44914248-44914267 None:intergenic 35.0%
! AGATTCTTACGGAAGAGTTT+TGG - chr4_1:44914249-44914268 None:intergenic 35.0%
CACTTCTTGTGAGATTCTTA+CGG - chr4_1:44914260-44914279 None:intergenic 35.0%
AGTGAGAATTATAACCGCAA+AGG + chr4_1:44914276-44914295 Msa0549740:CDS 35.0%
AATTATAACCGCAAAGGCTT+TGG + chr4_1:44914282-44914301 Msa0549740:CDS 35.0%
!! GTTCAATTGATTTGTGGAGA+TGG + chr4_1:44914709-44914728 Msa0549740:intron 35.0%
! TGAGATTTTATGCCTCTGTT+TGG + chr4_1:44914810-44914829 Msa0549740:intron 35.0%
! TTTTATGCCTCTGTTTGGAT+TGG + chr4_1:44914815-44914834 Msa0549740:intron 35.0%
AAATAAGCCAATCCAAACAG+AGG - chr4_1:44914825-44914844 None:intergenic 35.0%
! AGACTGTTTGAGACAGTTAA+CGG + chr4_1:44914874-44914893 Msa0549740:intron 35.0%
GTGGCATAAACAACGTATTA+CGG - chr4_1:44914918-44914937 None:intergenic 35.0%
! AATGGGTTTGAGTATACATG+GGG + chr4_1:44915278-44915297 Msa0549740:CDS 35.0%
CCAACAAAATCCAAAGGATT+CGG - chr4_1:44915324-44915343 None:intergenic 35.0%
! CGAATCCTTTGGATTTTGTT+GGG + chr4_1:44915322-44915341 Msa0549740:CDS 35.0%
! GAATCCTTTGGATTTTGTTG+GGG + chr4_1:44915323-44915342 Msa0549740:CDS 35.0%
! AATCCTTTGGATTTTGTTGG+GGG + chr4_1:44915324-44915343 Msa0549740:CDS 35.0%
TTCAAATTGCTTATGAAGCC+AGG + chr4_1:44915360-44915379 Msa0549740:CDS 35.0%
TTCATCAGGAAATTGTTTCC+TGG - chr4_1:44915381-44915400 None:intergenic 35.0%
TGGGTTGTGGATAATTTCAT+TGG - chr4_1:44915417-44915436 None:intergenic 35.0%
CTAAGAGGGTCCTATATTTA+GGG - chr4_1:44915516-44915535 None:intergenic 35.0%
ACTAAGAGGGTCCTATATTT+AGG - chr4_1:44915517-44915536 None:intergenic 35.0%
AAATTAACTCCCTCTCTTGA+TGG - chr4_1:44915613-44915632 None:intergenic 35.0%
GAAGTGCAGAATATTCCTAT+TGG + chr4_1:44915923-44915942 Msa0549740:CDS 35.0%
CAGAATATTCCTATTGGAGA+AGG + chr4_1:44915929-44915948 Msa0549740:CDS 35.0%
AGAAGGGAAGAAACAATTTG+AGG + chr4_1:44915946-44915965 Msa0549740:CDS 35.0%
! ACAATTTGAGGTTGTCAACA+AGG + chr4_1:44915958-44915977 Msa0549740:CDS 35.0%
! CAATTTGAGGTTGTCAACAA+GGG + chr4_1:44915959-44915978 Msa0549740:CDS 35.0%
!! ATAGATACCTTTGAAACCCA+CGG - chr4_1:44916076-44916095 None:intergenic 35.0%
! GTTGTCGAAAAGCACAAAAA+AGG + chr4_1:44916208-44916227 Msa0549740:CDS 35.0%
GACTATACCTCGATAATTCA+TGG + chr4_1:44916232-44916251 Msa0549740:CDS 35.0%
AAATCAGACAACAATGCTCA+AGG + chr4_1:44916651-44916670 Msa0549740:CDS 35.0%
AATCAGACAACAATGCTCAA+GGG + chr4_1:44916652-44916671 Msa0549740:CDS 35.0%
!!! TCGGTTAGATTTTTTTGCTG+TGG + chr4_1:44916689-44916708 Msa0549740:intron 35.0%
! TCATTTTATAGGCAGACTAG+TGG + chr4_1:44916783-44916802 Msa0549740:intron 35.0%
AGGACTATGATGCGTAAATA+TGG + chr4_1:44916808-44916827 Msa0549740:CDS 35.0%
! ACAAGATGCTATTTACAAGC+TGG + chr4_1:44917075-44917094 Msa0549740:CDS 35.0%
GATCTTATGTTAGTTGTTGG+TGG + chr4_1:44917112-44917131 Msa0549740:CDS 35.0%
TTGTATGCTATTCTGTTTCC+TGG - chr4_1:44917229-44917248 None:intergenic 35.0%
GATGTTACACCAATCCTTAA+TGG - chr4_1:44917414-44917433 None:intergenic 35.0%
! TTAAGGATTGGTGTAACATC+TGG + chr4_1:44917414-44917433 Msa0549740:CDS 35.0%
CAGGATGAACTTGAAATTAC+AGG + chr4_1:44917815-44917834 Msa0549740:three_prime_UTR 35.0%
!! TAGATTGGTCTATGATGACA+AGG - chr4_1:44917944-44917963 None:intergenic 35.0%
ATGTCTCTATTGACCAGTAA+TGG + chr4_1:44918012-44918031 Msa0549740:three_prime_UTR 35.0%
TCGAATGATAGTACCATTAC+TGG - chr4_1:44918028-44918047 None:intergenic 35.0%
TGTCCTGACAGTATCTTCAA+TGG + chr4_1:44914104-44914123 Msa0549740:exon 40.0%
!! TTTTGGGTCAAAATCGGAGT+CGG - chr4_1:44914232-44914251 None:intergenic 40.0%
TACATGCATCAGTGTCATGT+TGG - chr4_1:44914566-44914585 None:intergenic 40.0%
CGCACACACATATTGAACTA+AGG - chr4_1:44915184-44915203 None:intergenic 40.0%
! CCGAATCCTTTGGATTTTGT+TGG + chr4_1:44915321-44915340 Msa0549740:CDS 40.0%
! ATCCTTTGGATTTTGTTGGG+GGG + chr4_1:44915325-44915344 Msa0549740:CDS 40.0%
! CCTTATTAACAGTTGGGTTG+TGG - chr4_1:44915430-44915449 None:intergenic 40.0%
CCACAACCCAACTGTTAATA+AGG + chr4_1:44915427-44915446 Msa0549740:CDS 40.0%
TCATGTAAAATGACGGCATG+TGG - chr4_1:44915850-44915869 None:intergenic 40.0%
TGTTTCTTCCCTTCTCCAAT+AGG - chr4_1:44915941-44915960 None:intergenic 40.0%
!! TAGATACCTTTGAAACCCAC+GGG - chr4_1:44916075-44916094 None:intergenic 40.0%
TCATGGTAAATATGCCCATG+AGG + chr4_1:44916249-44916268 Msa0549740:CDS 40.0%
AGCAAAAGATGCAGTTGCTA+CGG - chr4_1:44916278-44916297 None:intergenic 40.0%
TTGTTCTTAGTTGCTGACAG+TGG + chr4_1:44916333-44916352 Msa0549740:intron 40.0%
GTTTGCGACTATATTCTTGG+TGG + chr4_1:44916439-44916458 Msa0549740:CDS 40.0%
AGCAAGATCAACTACAAGAC+AGG - chr4_1:44916521-44916540 None:intergenic 40.0%
TGGATCAAAGCCCTTAGAAA+GGG - chr4_1:44916602-44916621 None:intergenic 40.0%
! TTGCAATGCCAAGTTTTACC+AGG - chr4_1:44916633-44916652 None:intergenic 40.0%
TATGATGCGTAAATATGGCG+TGG + chr4_1:44916813-44916832 Msa0549740:CDS 40.0%
CACAATTTGTGATGCTACTC+AGG + chr4_1:44916867-44916886 Msa0549740:CDS 40.0%
! AGATGCTATTTACAAGCTGG+TGG + chr4_1:44917078-44917097 Msa0549740:CDS 40.0%
!! TTATGTTAGTTGTTGGTGGC+TGG + chr4_1:44917116-44917135 Msa0549740:CDS 40.0%
ATTGACAGCGAGCAAAGAAT+TGG + chr4_1:44917202-44917221 Msa0549740:CDS 40.0%
TTCTACCAAAGGGTCCATTA+AGG + chr4_1:44917397-44917416 Msa0549740:CDS 40.0%
AGAAAATACCTTGTCAGGTG+TGG - chr4_1:44917445-44917464 None:intergenic 40.0%
GCAAGAGAAAATACCTTGTC+AGG - chr4_1:44917450-44917469 None:intergenic 40.0%
TGCATCATTGGATTTCACAC+AGG + chr4_1:44917689-44917708 Msa0549740:intron 40.0%
CATTACAACTCGTGTAACGT+AGG + chr4_1:44917760-44917779 Msa0549740:exon 40.0%
TCATCCATGCATTTGTACTC+TGG + chr4_1:44917971-44917990 Msa0549740:three_prime_UTR 40.0%
ACTGTCAGGACAGAGACAAA+CGG - chr4_1:44914096-44914115 None:intergenic 45.0%
GAGCCATTGAAGATACTGTC+AGG - chr4_1:44914110-44914129 None:intergenic 45.0%
CTCGCGATTCATGAGTTTGA+GGG - chr4_1:44914322-44914341 None:intergenic 45.0%
ACTCGCGATTCATGAGTTTG+AGG - chr4_1:44914323-44914342 None:intergenic 45.0%
TGGGACTTTATGCCTCTGTT+TGG - chr4_1:44914962-44914981 None:intergenic 45.0%
AACCCCCCAACAAAATCCAA+AGG - chr4_1:44915330-44915349 None:intergenic 45.0%
! ATTTTGTTGGGGGGTTGAGA+GGG + chr4_1:44915334-44915353 Msa0549740:CDS 45.0%
CAGAGATCAATGAAGGCGAT+AGG - chr4_1:44915464-44915483 None:intergenic 45.0%
GAGGGTCCTATATTTAGGGA+CGG - chr4_1:44915512-44915531 None:intergenic 45.0%
GGACCCTCTTAGTCAAATCA+TGG + chr4_1:44915524-44915543 Msa0549740:intron 45.0%
TGTGGAAGAAAACAAGGCAC+TGG - chr4_1:44915832-44915851 None:intergenic 45.0%
ACGGCATGTGGAAGAAAACA+AGG - chr4_1:44915838-44915857 None:intergenic 45.0%
! GTGCTTGATGATTGATGCAG+CGG + chr4_1:44915888-44915907 Msa0549740:intron 45.0%
! GTAGTCATACTGCCTGCTTT+TGG + chr4_1:44915986-44916005 Msa0549740:CDS 45.0%
AGTCAACATCTCGTCAACTG+CGG - chr4_1:44916014-44916033 None:intergenic 45.0%
AGTTGCTACGGTTTCCTCAT+GGG - chr4_1:44916266-44916285 None:intergenic 45.0%
! GTAGCAACTGCATCTTTTGC+TGG + chr4_1:44916277-44916296 Msa0549740:CDS 45.0%
AGTCGCAAACATATTCAGCC+TGG - chr4_1:44916429-44916448 None:intergenic 45.0%
AAATGCCTCTCTGGTTGAAC+TGG - chr4_1:44916479-44916498 None:intergenic 45.0%
!!! AACCAGAGAGGCATTTTTCG+AGG + chr4_1:44916483-44916502 Msa0549740:CDS 45.0%
AACCTCGAAAAATGCCTCTC+TGG - chr4_1:44916488-44916507 None:intergenic 45.0%
CTGGATCAAAGCCCTTAGAA+AGG - chr4_1:44916603-44916622 None:intergenic 45.0%
! AGTTTTACCAGGTCACTGTC+TGG - chr4_1:44916622-44916641 None:intergenic 45.0%
GACAGTGACCTGGTAAAACT+TGG + chr4_1:44916622-44916641 Msa0549740:CDS 45.0%
AAGGGAGAGACTGAAGAGAT+CGG + chr4_1:44916670-44916689 Msa0549740:CDS 45.0%
TTATAGGCAGACTAGTGGAG+AGG + chr4_1:44916788-44916807 Msa0549740:intron 45.0%
CAAGCTGGTGGAGAAAGATA+TGG + chr4_1:44917090-44917109 Msa0549740:CDS 45.0%
AACGCGGAATTCCTTCTTAC+TGG + chr4_1:44917179-44917198 Msa0549740:CDS 45.0%
TCGCTGTCAATCCAGTAAGA+AGG - chr4_1:44917193-44917212 None:intergenic 45.0%
! CCAATCCTTAATGGACCCTT+TGG - chr4_1:44917405-44917424 None:intergenic 45.0%
CCAAAGGGTCCATTAAGGAT+TGG + chr4_1:44917402-44917421 Msa0549740:CDS 45.0%
ATTGGATTTCACACAGGTCG+TGG + chr4_1:44917695-44917714 Msa0549740:intron 45.0%
CGTGGAAGATGCTCTTATCA+AGG + chr4_1:44917713-44917732 Msa0549740:CDS 45.0%
CTGTCAGGACAGAGACAAAC+GGG - chr4_1:44914095-44914114 None:intergenic 50.0%
AACGGACGGAGAAGAGTTTG+CGG - chr4_1:44914203-44914222 None:intergenic 50.0%
CCTTGTGACCAAAGCCTTTG+CGG - chr4_1:44914293-44914312 None:intergenic 50.0%
GTGATGCTAGCCGAATCCTT+TGG + chr4_1:44915311-44915330 Msa0549740:CDS 50.0%
! GATTTTGTTGGGGGGTTGAG+AGG + chr4_1:44915333-44915352 Msa0549740:CDS 50.0%
!! GGAAGAAAACAAGGCACTGG+CGG - chr4_1:44915829-44915848 None:intergenic 50.0%
ATGATTGATGCAGCGGCTAG+AGG + chr4_1:44915895-44915914 Msa0549740:intron 50.0%
TCGTTGATACAACTTGCCCG+TGG + chr4_1:44916056-44916075 Msa0549740:CDS 50.0%
CGTTGATACAACTTGCCCGT+GGG + chr4_1:44916057-44916076 Msa0549740:CDS 50.0%
AACTTGCCCGTGGGTTTCAA+AGG + chr4_1:44916066-44916085 Msa0549740:CDS 50.0%
CAGTTGCTACGGTTTCCTCA+TGG - chr4_1:44916267-44916286 None:intergenic 50.0%
TGGATCCAGTTCAACCAGAG+AGG + chr4_1:44916471-44916490 Msa0549740:CDS 50.0%
CTTTGATCCAGACAGTGACC+TGG + chr4_1:44916612-44916631 Msa0549740:CDS 50.0%
AGCATCTTGTCGCTCCTGAA+AGG - chr4_1:44917065-44917084 None:intergenic 50.0%
ACACCTACAAGAGATAGCCG+AGG + chr4_1:44917156-44917175 Msa0549740:CDS 50.0%
GTTCCTCGGCTATCTCTTGT+AGG - chr4_1:44917162-44917181 None:intergenic 50.0%
AGAAGGAATTCCGCGTTCCT+CGG - chr4_1:44917176-44917195 None:intergenic 50.0%
AGCGAGCAAAGAATTGGTCC+AGG + chr4_1:44917208-44917227 Msa0549740:CDS 50.0%
CTTTCAGCATGGTGAGCTTG+TGG + chr4_1:44917362-44917381 Msa0549740:intron 50.0%
GCAGCCAGAGTACAAATGCA+TGG - chr4_1:44917978-44917997 None:intergenic 50.0%
GCATTTGTACTCTGGCTGCA+AGG + chr4_1:44917979-44917998 Msa0549740:three_prime_UTR 50.0%
AGAAGGAACGTCGATGCGAG+TGG - chr4_1:44914163-44914182 None:intergenic 55.0%
CAACGGAAAGTGGACGGAGA+AGG - chr4_1:44914180-44914199 None:intergenic 55.0%
TTGCGGCAACGGAAAGTGGA+CGG - chr4_1:44914186-44914205 None:intergenic 55.0%
GAGTTTGCGGCAACGGAAAG+TGG - chr4_1:44914190-44914209 None:intergenic 55.0%
CGGAGAAGAGTTTGCGGCAA+CGG - chr4_1:44914197-44914216 None:intergenic 55.0%
TGGGTCAAAATCGGAGTCGG+CGG - chr4_1:44914229-44914248 None:intergenic 55.0%
! CCGCAAAGGCTTTGGTCACA+AGG + chr4_1:44914290-44914309 Msa0549740:CDS 55.0%
TCAACTGCGGCTCCAAAAGC+AGG - chr4_1:44916001-44916020 None:intergenic 55.0%
CAAGAGATAGCCGAGGAACG+CGG + chr4_1:44917163-44917182 Msa0549740:CDS 55.0%
TGGTGCATCCACACCTGACA+AGG + chr4_1:44917434-44917453 Msa0549740:CDS 55.0%
AGGAACGTCGATGCGAGTGG+CGG - chr4_1:44914160-44914179 None:intergenic 60.0%
AATCGGAGTCGGCGGAGCAA+CGG - chr4_1:44914221-44914240 None:intergenic 60.0%
GATGCAGCGGCTAGAGGAGA+TGG + chr4_1:44915901-44915920 Msa0549740:intron 60.0%
GAACGTCGATGCGAGTGGCG+GGG - chr4_1:44914158-44914177 None:intergenic 65.0%
GGAACGTCGATGCGAGTGGC+GGG - chr4_1:44914159-44914178 None:intergenic 65.0%
! TGCGAGTGGCGGGGAGACGT+AGG - chr4_1:44914149-44914168 None:intergenic 70.0%
GGAGTCGGCGGAGCAACGGA+CGG - chr4_1:44914217-44914236 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 44914032 44918079 44914032 ID=Msa0549740;Name=Msa0549740
chr4_1 mRNA 44914032 44918079 44914032 ID=Msa0549740-mRNA-1;Parent=Msa0549740;Name=Msa0549740-mRNA-1;_AED=0.11;_eAED=0.11;_QI=91|1|1|1|1|1|10|303|449
chr4_1 exon 44914032 44914348 44914032 ID=Msa0549740-mRNA-1:exon:11754;Parent=Msa0549740-mRNA-1
chr4_1 exon 44915252 44915448 44915252 ID=Msa0549740-mRNA-1:exon:11755;Parent=Msa0549740-mRNA-1
chr4_1 exon 44915908 44916087 44915908 ID=Msa0549740-mRNA-1:exon:11756;Parent=Msa0549740-mRNA-1
chr4_1 exon 44916199 44916330 44916199 ID=Msa0549740-mRNA-1:exon:11757;Parent=Msa0549740-mRNA-1
chr4_1 exon 44916430 44916504 44916430 ID=Msa0549740-mRNA-1:exon:11758;Parent=Msa0549740-mRNA-1
chr4_1 exon 44916586 44916691 44916586 ID=Msa0549740-mRNA-1:exon:11759;Parent=Msa0549740-mRNA-1
chr4_1 exon 44916794 44916888 44916794 ID=Msa0549740-mRNA-1:exon:11760;Parent=Msa0549740-mRNA-1
chr4_1 exon 44917070 44917255 44917070 ID=Msa0549740-mRNA-1:exon:11761;Parent=Msa0549740-mRNA-1
chr4_1 exon 44917369 44917455 44917369 ID=Msa0549740-mRNA-1:exon:11762;Parent=Msa0549740-mRNA-1
chr4_1 exon 44917711 44918079 44917711 ID=Msa0549740-mRNA-1:exon:11763;Parent=Msa0549740-mRNA-1
chr4_1 five_prime_UTR 44914032 44914122 44914032 ID=Msa0549740-mRNA-1:five_prime_utr;Parent=Msa0549740-mRNA-1
chr4_1 CDS 44914123 44914348 44914123 ID=Msa0549740-mRNA-1:cds;Parent=Msa0549740-mRNA-1
chr4_1 CDS 44915252 44915448 44915252 ID=Msa0549740-mRNA-1:cds;Parent=Msa0549740-mRNA-1
chr4_1 CDS 44915908 44916087 44915908 ID=Msa0549740-mRNA-1:cds;Parent=Msa0549740-mRNA-1
chr4_1 CDS 44916199 44916330 44916199 ID=Msa0549740-mRNA-1:cds;Parent=Msa0549740-mRNA-1
chr4_1 CDS 44916430 44916504 44916430 ID=Msa0549740-mRNA-1:cds;Parent=Msa0549740-mRNA-1
chr4_1 CDS 44916586 44916691 44916586 ID=Msa0549740-mRNA-1:cds;Parent=Msa0549740-mRNA-1
chr4_1 CDS 44916794 44916888 44916794 ID=Msa0549740-mRNA-1:cds;Parent=Msa0549740-mRNA-1
chr4_1 CDS 44917070 44917255 44917070 ID=Msa0549740-mRNA-1:cds;Parent=Msa0549740-mRNA-1
chr4_1 CDS 44917369 44917455 44917369 ID=Msa0549740-mRNA-1:cds;Parent=Msa0549740-mRNA-1
chr4_1 CDS 44917711 44917776 44917711 ID=Msa0549740-mRNA-1:cds;Parent=Msa0549740-mRNA-1
chr4_1 three_prime_UTR 44917777 44918079 44917777 ID=Msa0549740-mRNA-1:three_prime_utr;Parent=Msa0549740-mRNA-1
Gene Sequence

>Msa0549740

ATGGCTCTCTGTTCGAATCTTTGCCTACGTCTCCCCGCCACTCGCATCGACGTTCCTTCTCCGTCCACTTTCCGTTGCCGCAAACTCTTCTCCGTCCGTTGCTCCGCCGACTCCGATTTTGACCCAAAACTCTTCCGTAAGAATCTCACAAGAAGTGAGAATTATAACCGCAAAGGCTTTGGTCACAAGGAAGAAACCCTCAAACTCATGAATCGCGAGTACACAAGTGACATCATTAAGACTTTGAAGGAAAATGGGTTTGAGTATACATGGGGTAATGTCACTGTGATGCTAGCCGAATCCTTTGGATTTTGTTGGGGGGTTGAGAGGGCTGTTCAAATTGCTTATGAAGCCAGGAAACAATTTCCTGATGAAAAAATTTGGATTACCAATGAAATTATCCACAACCCAACTGTTAATAAGCGGCTAGAGGAGATGGAAGTGCAGAATATTCCTATTGGAGAAGGGAAGAAACAATTTGAGGTTGTCAACAAGGGTGATGTAGTCATACTGCCTGCTTTTGGAGCCGCAGTTGACGAGATGTTGACTTTGAGTGAGAAAAATGTTCAAATCGTTGATACAACTTGCCCGTGGGTTTCAAAGGTATGGAATGTTGTCGAAAAGCACAAAAAAGGAGACTATACCTCGATAATTCATGGTAAATATGCCCATGAGGAAACCGTAGCAACTGCATCTTTTGCTGGAAAATACATAATTGTGAAAAATATGGCAGAGGCTGAATATGTTTGCGACTATATTCTTGGTGGTGAATTTAATGGATCCAGTTCAACCAGAGAGGCATTTTTCGAGAAATTTAAATTTGCCCTTTCTAAGGGCTTTGATCCAGACAGTGACCTGGTAAAACTTGGCATTGCAAATCAGACAACAATGCTCAAGGGAGAGACTGAAGAGATCGGCAGACTAGTGGAGAGGACTATGATGCGTAAATATGGCGTGGAAAACGTTACTGAGCACTTCATAAGCTTCAACACAATTTGTGATGCTACTCAGGAGCGACAAGATGCTATTTACAAGCTGGTGGAGAAAGATATGGATCTTATGTTAGTTGTTGGTGGCTGGAACTCGAGCAACACATCACACCTACAAGAGATAGCCGAGGAACGCGGAATTCCTTCTTACTGGATTGACAGCGAGCAAAGAATTGGTCCAGGAAACAGAATAGCATACAAGTTGAATCATGGTGAGCTTGTGGAGAAAGAAAACTTTCTACCAAAGGGTCCATTAAGGATTGGTGTAACATCTGGTGCATCCACACCTGACAAGGTCGTGGAAGATGCTCTTATCAAGGTGTTTGATTTGAAAAGGGAAGAAGCATTACAACTCGTGTAA

Protein sequence

>Msa0549740

MALCSNLCLRLPATRIDVPSPSTFRCRKLFSVRCSADSDFDPKLFRKNLTRSENYNRKGFGHKEETLKLMNREYTSDIIKTLKENGFEYTWGNVTVMLAESFGFCWGVERAVQIAYEARKQFPDEKIWITNEIIHNPTVNKRLEEMEVQNIPIGEGKKQFEVVNKGDVVILPAFGAAVDEMLTLSEKNVQIVDTTCPWVSKVWNVVEKHKKGDYTSIIHGKYAHEETVATASFAGKYIIVKNMAEAEYVCDYILGGEFNGSSSTREAFFEKFKFALSKGFDPDSDLVKLGIANQTTMLKGETEEIGRLVERTMMRKYGVENVTEHFISFNTICDATQERQDAIYKLVEKDMDLMLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNRIAYKLNHGELVEKENFLPKGPLRIGVTSGASTPDKVVEDALIKVFDLKREEALQLV*