Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130460 | XP_013450604.1 | 87.984 | 258 | 27 | 2 | 1 | 258 | 1 | 254 | 1.78e-154 | 440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130460 | sp|O32107|YUID_BACSU | 48.322 | 149 | 62 | 2 | 111 | 246 | 3 | 149 | 4.55e-28 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130460 | A0A072U4K7 | 87.984 | 258 | 27 | 2 | 1 | 258 | 1 | 254 | 8.52e-155 | 440 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa1130460 | 0.816168 | 6.356438e-52 | -8.615850e-47 |
| Msa0045660 | Msa1130460 | 0.816696 | 4.840873e-52 | -8.615850e-47 |
| Msa0096510 | Msa1130460 | 0.803370 | 3.600646e-49 | -8.615850e-47 |
| Msa0607440 | Msa1130460 | 0.804766 | 1.845137e-49 | -8.615850e-47 |
| Msa0622690 | Msa1130460 | 0.816992 | 4.154353e-52 | -8.615850e-47 |
| Msa0668160 | Msa1130460 | 0.809353 | 1.973444e-50 | -8.615850e-47 |
| Msa0148430 | Msa1130460 | 0.801751 | 7.767009e-49 | -8.615850e-47 |
| Msa0175530 | Msa1130460 | 0.806295 | 8.818314e-50 | -8.615850e-47 |
| Msa0373130 | Msa1130460 | 0.800013 | 1.758440e-48 | -8.615850e-47 |
| Msa0467710 | Msa1130460 | 0.800837 | 1.194905e-48 | -8.615850e-47 |
| Msa0468020 | Msa1130460 | 0.800392 | 1.472299e-48 | -8.615850e-47 |
| Msa1028720 | Msa1130460 | 0.806406 | 8.356495e-50 | -8.615850e-47 |
| Msa1067710 | Msa1130460 | 0.802798 | 4.727941e-49 | -8.615850e-47 |
| Msa0264940 | Msa1130460 | -0.829935 | 3.896203e-55 | -8.615850e-47 |
| Msa0302990 | Msa1130460 | -0.827425 | 1.575878e-54 | -8.615850e-47 |
| Msa1130460 | Msa1130480 | 0.986014 | 2.154637e-165 | -8.615850e-47 |
| Msa1130460 | Msa1145370 | 0.802112 | 6.548333e-49 | -8.615850e-47 |
| Msa1130460 | Msa1182400 | 0.802428 | 5.637039e-49 | -8.615850e-47 |
| Msa1130460 | Msa1191390 | 0.808296 | 3.321170e-50 | -8.615850e-47 |
| Msa1130460 | Msa1206560 | 0.801141 | 1.035863e-48 | -8.615850e-47 |
| Msa1130460 | Msa1341440 | 0.921170 | 5.042957e-88 | -8.615850e-47 |
| Msa1130460 | Msa1371840 | 0.822432 | 2.376441e-53 | -8.615850e-47 |
| Msa1130460 | Msa1391600 | 0.801906 | 7.219455e-49 | -8.615850e-47 |
| Msa1130460 | Msa1395640 | 0.801741 | 7.802071e-49 | -8.615850e-47 |
| Msa1130460 | Msa1408190 | 0.801460 | 8.911216e-49 | -8.615850e-47 |
| Msa1130460 | Msa1426620 | 0.961119 | 2.472850e-119 | -8.615850e-47 |
| Msa1130460 | Msa1431240 | 0.815305 | 9.897412e-52 | -8.615850e-47 |
| Msa1130460 | Msa1433380 | 0.804778 | 1.834440e-49 | -8.615850e-47 |
| Msa1130460 | Msa1440980 | 0.807778 | 4.279596e-50 | -8.615850e-47 |
| Msa1130460 | Msa1460310 | -0.827649 | 1.392260e-54 | -8.615850e-47 |
| Msa0528740 | Msa1130460 | 0.801786 | 7.641196e-49 | -8.615850e-47 |
| Msa0549740 | Msa1130460 | 0.803457 | 3.454603e-49 | -8.615850e-47 |
| Msa0846640 | Msa1130460 | 0.802268 | 6.081264e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130460 | MtrunA17_Chr7g0275651 | 87.857 | 140 | 13 | 1 | 123 | 258 | 100 | 239 | 4.08e-82 | 246 |
| Msa1130460 | MtrunA17_Chr3g0122831 | 50.000 | 136 | 67 | 1 | 114 | 248 | 17 | 152 | 1.05e-40 | 137 |
| Msa1130460 | MtrunA17_Chr2g0322301 | 43.137 | 153 | 84 | 2 | 96 | 247 | 10 | 160 | 8.92e-38 | 130 |
| Msa1130460 | MtrunA17_Chr2g0309391 | 32.203 | 118 | 79 | 1 | 108 | 224 | 55 | 172 | 2.84e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130460 | AT3G61770.1 | 67.453 | 212 | 55 | 2 | 59 | 256 | 71 | 282 | 5.01e-100 | 293 |
| Msa1130460 | AT1G67600.1 | 50.365 | 137 | 67 | 1 | 113 | 248 | 17 | 153 | 6.76e-41 | 139 |
| Msa1130460 | AT1G24350.1 | 49.242 | 132 | 66 | 1 | 113 | 243 | 21 | 152 | 3.52e-39 | 134 |
| Msa1130460 | AT1G24350.5 | 48.800 | 125 | 63 | 1 | 113 | 236 | 21 | 145 | 4.06e-36 | 126 |
| Msa1130460 | AT1G24350.3 | 48.000 | 125 | 64 | 1 | 113 | 236 | 21 | 145 | 7.33e-36 | 126 |
| Msa1130460 | AT1G24350.2 | 48.000 | 125 | 64 | 1 | 113 | 236 | 21 | 145 | 7.89e-36 | 125 |
| Msa1130460 | AT1G24350.4 | 48.387 | 124 | 63 | 1 | 113 | 235 | 21 | 144 | 1.13e-35 | 124 |
| Msa1130460 | AT3G21610.1 | 47.761 | 134 | 68 | 2 | 115 | 247 | 35 | 167 | 1.01e-34 | 123 |
| Msa1130460 | AT3G21610.2 | 48.214 | 112 | 57 | 1 | 137 | 247 | 4 | 115 | 5.06e-30 | 109 |
| Msa1130460 | AT3G12685.1 | 33.962 | 159 | 85 | 3 | 108 | 246 | 47 | 205 | 1.89e-19 | 84.3 |
Find 74 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCCAAAGAAACCATAAT+TGG | 0.165680 | 7_3:+82611915 | Msa1130460:CDS |
| TTGAGATTGTTCTGTGCTTC+TGG | 0.174739 | 7_3:+82612202 | Msa1130460:CDS |
| AAACCCAATTATGGTTTCTT+TGG | 0.186378 | 7_3:-82611919 | None:intergenic |
| TTTAGCTTTCTTTCACTAAT+TGG | 0.198388 | 7_3:-82616053 | None:intergenic |
| CAGCATGAGTATAATGTAAA+TGG | 0.284295 | 7_3:+82616311 | Msa1130460:three_prime_UTR |
| AAGGGAATGAAACCCAATTA+TGG | 0.289882 | 7_3:-82611928 | None:intergenic |
| ACTTAGGATTATTGATTGAT+AGG | 0.294726 | 7_3:+82616185 | Msa1130460:three_prime_UTR |
| CCTCCGGTAGTAAATATAAA+TGG | 0.306046 | 7_3:+82616345 | Msa1130460:three_prime_UTR |
| GGACAATGATGATGGAAGTT+TGG | 0.337325 | 7_3:-82611801 | None:intergenic |
| GATGGAAGTTTGGAAGTTAG+AGG | 0.347072 | 7_3:-82611791 | None:intergenic |
| TCTTTGGGAATTATCTGAAT+TGG | 0.350821 | 7_3:-82611903 | None:intergenic |
| AACCCAATTATGGTTTCTTT+GGG | 0.351443 | 7_3:-82611918 | None:intergenic |
| TGTTTGATTGTTTGCGCAAA+AGG | 0.358717 | 7_3:-82611947 | None:intergenic |
| CTTAGGATTATTGATTGATA+GGG | 0.375389 | 7_3:+82616186 | Msa1130460:three_prime_UTR |
| TTGAGAACAAGAAGTGGAAA+TGG | 0.382093 | 7_3:-82611852 | None:intergenic |
| TACTTGCAAAACGGAGGTTT+GGG | 0.382574 | 7_3:+82612019 | Msa1130460:CDS |
| TTACTTGCAAAACGGAGGTT+TGG | 0.395141 | 7_3:+82612018 | Msa1130460:CDS |
| ATTGTTATGTATGATGCTAT+TGG | 0.409979 | 7_3:+82612334 | Msa1130460:CDS |
| GTGTTTGCTGGTGCCCTGCT+TGG | 0.410993 | 7_3:+82616104 | Msa1130460:CDS |
| GGTAATATAATGCAACCTTC+TGG | 0.413830 | 7_3:+82616224 | Msa1130460:three_prime_UTR |
| ACCCCATCTCAAGTGTTTGC+TGG | 0.426034 | 7_3:+82616092 | Msa1130460:CDS |
| AGGTTGTGTTGTGGTGGGTT+AGG | 0.437936 | 7_3:+82616154 | Msa1130460:CDS |
| TTCCCAAAGAAACCATAATT+GGG | 0.445716 | 7_3:+82611916 | Msa1130460:CDS |
| GGGTTAGGTCGTTAGGACTT+AGG | 0.447284 | 7_3:+82616169 | Msa1130460:exon |
| ATTCTATTCTAGCTAACTCA+TGG | 0.456192 | 7_3:+82611754 | Msa1130460:exon |
| AGAAAGCTAAAGGAACTTCT+TGG | 0.460632 | 7_3:+82616065 | Msa1130460:CDS |
| ACAGGTGCTTAACATGATTC+TGG | 0.467232 | 7_3:+82616010 | Msa1130460:intron |
| TTGTGGTGGGTTAGGTCGTT+AGG | 0.469090 | 7_3:+82616162 | Msa1130460:exon |
| ATTCTGGCTGACATGTTTCA+AGG | 0.469695 | 7_3:+82616026 | Msa1130460:CDS |
| AGACTAAACCCCAAAGAAAC+CGG | 0.472907 | 7_3:-82612310 | None:intergenic |
| ATTTCTTTGTAGAAAGAAAG+TGG | 0.473240 | 7_3:+82612176 | Msa1130460:CDS |
| ACAACCTTGGCAGCAGAAAC+AGG | 0.473702 | 7_3:-82616138 | None:intergenic |
| TGTGCTTGAATGATGAATAC+AGG | 0.475864 | 7_3:-82616275 | None:intergenic |
| GTAGCCTGTTTCTGCTGCCA+AGG | 0.476759 | 7_3:+82616134 | Msa1130460:CDS |
| GAAGTTTGGAAGTTAGAGGA+AGG | 0.482388 | 7_3:-82611787 | None:intergenic |
| AACAACCCAGAAACAAAAGT+TGG | 0.487269 | 7_3:-82612115 | None:intergenic |
| TGAGAACAAGAAGTGGAAAT+GGG | 0.496852 | 7_3:-82611851 | None:intergenic |
| GAAGCCAATGTAGCCACAAA+AGG | 0.498839 | 7_3:-82612088 | None:intergenic |
| GTTTGATTGTTTGCGCAAAA+GGG | 0.499743 | 7_3:-82611946 | None:intergenic |
| TTTCTTTGTAGAAAGAAAGT+GGG | 0.502712 | 7_3:+82612177 | Msa1130460:CDS |
| ATAGGGGATACTATTTGCTC+TGG | 0.503787 | 7_3:+82616203 | Msa1130460:three_prime_UTR |
| CTGCCAAGGTTGTGTTGTGG+TGG | 0.507895 | 7_3:+82616148 | Msa1130460:CDS |
| ACATGCTGGCATGCAAGCTC+AGG | 0.509605 | 7_3:+82612366 | Msa1130460:CDS |
| ACTTCAGTTGCTCTCTGTCA+TGG | 0.510430 | 7_3:+82612268 | Msa1130460:CDS |
| CATAGCGCAGAATGAGAAGA+AGG | 0.513464 | 7_3:-82612232 | None:intergenic |
| GCACCAGCAAACACTTGAGA+TGG | 0.518672 | 7_3:-82616095 | None:intergenic |
| AATTAGTGAAAGAAAGCTAA+AGG | 0.524355 | 7_3:+82616055 | Msa1130460:CDS |
| TTAGGATTATTGATTGATAG+GGG | 0.524996 | 7_3:+82616187 | Msa1130460:three_prime_UTR |
| GGACCATTTATATTTACTAC+CGG | 0.527603 | 7_3:-82616348 | None:intergenic |
| ACAACCCAGAAACAAAAGTT+GGG | 0.531405 | 7_3:-82612114 | None:intergenic |
| TGGGTTGTTTGCGTGGTTTG+TGG | 0.534535 | 7_3:+82612129 | Msa1130460:CDS |
| GATTGTTCTGTGCTTCTGGA+GGG | 0.541900 | 7_3:+82612206 | Msa1130460:CDS |
| AGATTGTTCTGTGCTTCTGG+AGG | 0.542518 | 7_3:+82612205 | Msa1130460:CDS |
| AAGTGTTGTTACTTGCAAAA+CGG | 0.543044 | 7_3:+82612010 | Msa1130460:CDS |
| TGCCAAGGTTGTGTTGTGGT+GGG | 0.550908 | 7_3:+82616149 | Msa1130460:CDS |
| CACCAGCAAACACTTGAGAT+GGG | 0.556379 | 7_3:-82616094 | None:intergenic |
| TTGTTTCTGGGTTGTTTGCG+TGG | 0.569800 | 7_3:+82612122 | Msa1130460:CDS |
| GCAAAACGGAGGTTTGGGAA+TGG | 0.571722 | 7_3:+82612024 | Msa1130460:CDS |
| AAGTGAAAGGACAATGATGA+TGG | 0.573349 | 7_3:-82611809 | None:intergenic |
| ATAAGATTGAGAACAAGAAG+TGG | 0.576173 | 7_3:-82611858 | None:intergenic |
| CTGCTGCCAAGGTTGTGTTG+TGG | 0.588915 | 7_3:+82616145 | Msa1130460:CDS |
| AACCCACCACAACACAACCT+TGG | 0.598748 | 7_3:-82616151 | None:intergenic |
| AAGAAGTGGAAATGGGTCTG+AGG | 0.599234 | 7_3:-82611844 | None:intergenic |
| AGAAGTGGAAATGGGTCTGA+GGG | 0.601799 | 7_3:-82611843 | None:intergenic |
| TTCTGGCTGACATGTTTCAA+GGG | 0.603699 | 7_3:+82616027 | Msa1130460:CDS |
| ATGCGTAACGACGAATGCAA+AGG | 0.606693 | 7_3:+82612054 | Msa1130460:CDS |
| ATTGGTGTTAGAAGACATGC+TGG | 0.633014 | 7_3:+82612352 | Msa1130460:CDS |
| TGTTGTTACTTGCAAAACGG+AGG | 0.648402 | 7_3:+82612013 | Msa1130460:CDS |
| CCATTTATATTTACTACCGG+AGG | 0.653925 | 7_3:-82616345 | None:intergenic |
| GGTACGTTTCATATACCAGA+AGG | 0.659441 | 7_3:-82616239 | None:intergenic |
| GGTGTTGAAGTGAAAGTGAA+AGG | 0.663065 | 7_3:-82611822 | None:intergenic |
| GTGCTTGAATGATGAATACA+GGG | 0.665212 | 7_3:-82616274 | None:intergenic |
| ACCAGCAAACACTTGAGATG+GGG | 0.665470 | 7_3:-82616093 | None:intergenic |
| AATACAGGGCACTAACTATG+CGG | 0.735031 | 7_3:-82616260 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGTAATAAATAATTCAA+GGG | - | chr7_3:82614303-82614322 | None:intergenic | 10.0% |
| !! | TATTTGTAATAAATAATTCA+AGG | - | chr7_3:82614304-82614323 | None:intergenic | 10.0% |
| !!! | AATTTTTCTTTATAAACAAA+AGG | - | chr7_3:82615960-82615979 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGGATATAAGA+GGG | - | chr7_3:82611718-82611737 | None:intergenic | 15.0% |
| !!! | AGAATAGAATGTTTTTTTTT+TGG | - | chr7_3:82611729-82611748 | None:intergenic | 15.0% |
| !! | TACTAATAATCAAATATGAA+AGG | - | chr7_3:82612410-82612429 | None:intergenic | 15.0% |
| !! | ACTGAAGATTTATATATATA+AGG | + | chr7_3:82613834-82613853 | Msa1130460:intron | 15.0% |
| !! | TTTGTAATAAATAATTCAAG+GGG | - | chr7_3:82614302-82614321 | None:intergenic | 15.0% |
| !!! | TATGAATTTTTTTGTTTTAG+AGG | + | chr7_3:82614750-82614769 | Msa1130460:intron | 15.0% |
| !! | TTAAAAAAAATGTATATGCT+TGG | + | chr7_3:82614956-82614975 | Msa1130460:intron | 15.0% |
| !! | ATAATTTACAGAAATGATAT+AGG | + | chr7_3:82615000-82615019 | Msa1130460:intron | 15.0% |
| !! | TAATTTACAGAAATGATATA+GGG | + | chr7_3:82615001-82615020 | Msa1130460:intron | 15.0% |
| !!! | GTTTTTTTTTTGGATATAAG+AGG | - | chr7_3:82611719-82611738 | None:intergenic | 20.0% |
| !! | TAAAAACAACTTATGAGTTA+TGG | - | chr7_3:82612684-82612703 | None:intergenic | 20.0% |
| !!! | CAAAATAATTTGTGTAAACT+CGG | + | chr7_3:82613005-82613024 | Msa1130460:intron | 20.0% |
| !!! | AAAATAATTTGTGTAAACTC+GGG | + | chr7_3:82613006-82613025 | Msa1130460:intron | 20.0% |
| !!! | CATTTTAAGTTTTGTTATTG+TGG | + | chr7_3:82613546-82613565 | Msa1130460:intron | 20.0% |
| !! | TTTGTTGCAACTTAAATAAT+TGG | - | chr7_3:82613777-82613796 | None:intergenic | 20.0% |
| !! | AAGTTAAACAAAAATGAACT+GGG | + | chr7_3:82614128-82614147 | Msa1130460:intron | 20.0% |
| !! | TTGTACTATTTAAAAACCAA+AGG | - | chr7_3:82614159-82614178 | None:intergenic | 20.0% |
| !! | AATGTTCAAAATACTGAATA+TGG | - | chr7_3:82614266-82614285 | None:intergenic | 20.0% |
| !!! | TATTCAGTATTTTGAACATT+AGG | + | chr7_3:82614266-82614285 | Msa1130460:intron | 20.0% |
| !! | TTGTAATAAATAATTCAAGG+GGG | - | chr7_3:82614301-82614320 | None:intergenic | 20.0% |
| !! | ATTTATTACAAATAAACCAG+TGG | + | chr7_3:82614310-82614329 | Msa1130460:intron | 20.0% |
| !! | TTTCTAACAGTCTAAATATT+GGG | - | chr7_3:82614786-82614805 | None:intergenic | 20.0% |
| !!! | GGTATTATTTTTCCTTAAAT+TGG | + | chr7_3:82614916-82614935 | Msa1130460:intron | 20.0% |
| !!! | CATTTTTTTTAAATGACATC+CGG | - | chr7_3:82614948-82614967 | None:intergenic | 20.0% |
| !! | TTTATGATAGAACATTATGA+CGG | + | chr7_3:82615285-82615304 | Msa1130460:intron | 20.0% |
| ! | ATTTCTTTGTAGAAAGAAAG+TGG | + | chr7_3:82612176-82612195 | Msa1130460:CDS | 25.0% |
| ! | TTTCTTTGTAGAAAGAAAGT+GGG | + | chr7_3:82612177-82612196 | Msa1130460:CDS | 25.0% |
| ! | ATTGTTATGTATGATGCTAT+TGG | + | chr7_3:82612334-82612353 | Msa1130460:CDS | 25.0% |
| !! | ATTTCATAAGTTCTCTAAGA+TGG | - | chr7_3:82612635-82612654 | None:intergenic | 25.0% |
| !!! | TAAGTTTTGTGAGATTGTTT+GGG | - | chr7_3:82612715-82612734 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGAGATTGTT+TGG | - | chr7_3:82612716-82612735 | None:intergenic | 25.0% |
| ! | CTAACTCAAAGAATATTAAG+AGG | + | chr7_3:82612944-82612963 | Msa1130460:intron | 25.0% |
| ! | TCAAAGAATATTAAGAGGTT+AGG | + | chr7_3:82612949-82612968 | Msa1130460:intron | 25.0% |
| ! | TTGCAAGAATTTGCAATAAT+AGG | - | chr7_3:82613286-82613305 | None:intergenic | 25.0% |
| ! | ATTATAGAATAAAGGACGAA+GGG | - | chr7_3:82613396-82613415 | None:intergenic | 25.0% |
| ! | TATTATAGAATAAAGGACGA+AGG | - | chr7_3:82613397-82613416 | None:intergenic | 25.0% |
| ! | AATAGCAGGTTAAAAATCAA+TGG | - | chr7_3:82613449-82613468 | None:intergenic | 25.0% |
| ! | GTAACATAATCTCTTTAGTT+TGG | + | chr7_3:82613726-82613745 | Msa1130460:intron | 25.0% |
| ! | TTGAATTAGGTTTGAATCTT+TGG | + | chr7_3:82613925-82613944 | Msa1130460:intron | 25.0% |
| ! | TTATATCTCAATTTGAGAAC+TGG | + | chr7_3:82613974-82613993 | Msa1130460:intron | 25.0% |
| ! | CTTACTAATGTCCAAAAATA+TGG | - | chr7_3:82614019-82614038 | None:intergenic | 25.0% |
| ! | TTAGTAAGATATTTCCCATA+AGG | + | chr7_3:82614031-82614050 | Msa1130460:intron | 25.0% |
| ! | GAAGTTAAACAAAAATGAAC+TGG | + | chr7_3:82614127-82614146 | Msa1130460:intron | 25.0% |
| !!! | ATATGGTTGGTAAATTTCTT+AGG | - | chr7_3:82614249-82614268 | None:intergenic | 25.0% |
| ! | TTCAAAATACTGAATATGGT+TGG | - | chr7_3:82614262-82614281 | None:intergenic | 25.0% |
| ! | AAATAAACCAGTGGAAAAAA+GGG | + | chr7_3:82614319-82614338 | Msa1130460:intron | 25.0% |
| ! | CAAACAATCTCATCATAATT+GGG | - | chr7_3:82614378-82614397 | None:intergenic | 25.0% |
| ! | GTAAAATTTAGTCACAAACA+GGG | - | chr7_3:82614477-82614496 | None:intergenic | 25.0% |
| !!! | ATGAGGTTTTAGATATAACA+TGG | - | chr7_3:82614603-82614622 | None:intergenic | 25.0% |
| ! | CAACATCCACAAAAAATAAA+GGG | - | chr7_3:82614645-82614664 | None:intergenic | 25.0% |
| ! | TCAACATCCACAAAAAATAA+AGG | - | chr7_3:82614646-82614665 | None:intergenic | 25.0% |
| ! | GTTTCTAACAGTCTAAATAT+TGG | - | chr7_3:82614787-82614806 | None:intergenic | 25.0% |
| ! | AATGAAGAAACATAGTTCAA+GGG | - | chr7_3:82614815-82614834 | None:intergenic | 25.0% |
| ! | AACTATGTTTCTTCATTGAT+AGG | + | chr7_3:82614818-82614837 | Msa1130460:intron | 25.0% |
| ! | AAAAAAATGTATATGCTTGG+TGG | + | chr7_3:82614959-82614978 | Msa1130460:intron | 25.0% |
| ! | TTTCAAACTAACAAAAGACT+GGG | - | chr7_3:82615102-82615121 | None:intergenic | 25.0% |
| ! | AGAAATACATAAAATGCAGA+TGG | - | chr7_3:82615140-82615159 | None:intergenic | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | - | chr7_3:82615558-82615577 | None:intergenic | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | - | chr7_3:82615562-82615581 | None:intergenic | 25.0% |
| !! | GTTATTGTTGTATTTCTGTA+GGG | + | chr7_3:82615748-82615767 | Msa1130460:intron | 25.0% |
| !! | TGTTGTTGTTGTATTTATGT+AGG | + | chr7_3:82615854-82615873 | Msa1130460:intron | 25.0% |
| !! | GTTGTTGTTGTATTTATGTA+GGG | + | chr7_3:82615855-82615874 | Msa1130460:intron | 25.0% |
| !!! | TTTAGCTTTCTTTCACTAAT+TGG | - | chr7_3:82616056-82616075 | None:intergenic | 25.0% |
| ! | AATTAGTGAAAGAAAGCTAA+AGG | + | chr7_3:82616055-82616074 | Msa1130460:CDS | 25.0% |
| !! | ACTTAGGATTATTGATTGAT+AGG | + | chr7_3:82616185-82616204 | Msa1130460:three_prime_UTR | 25.0% |
| !! | CTTAGGATTATTGATTGATA+GGG | + | chr7_3:82616186-82616205 | Msa1130460:three_prime_UTR | 25.0% |
| !! | TTAGGATTATTGATTGATAG+GGG | + | chr7_3:82616187-82616206 | Msa1130460:three_prime_UTR | 25.0% |
| ! | ATTCTATTCTAGCTAACTCA+TGG | + | chr7_3:82611754-82611773 | Msa1130460:exon | 30.0% |
| ATAAGATTGAGAACAAGAAG+TGG | - | chr7_3:82611861-82611880 | None:intergenic | 30.0% | |
| ! | TCTTTGGGAATTATCTGAAT+TGG | - | chr7_3:82611906-82611925 | None:intergenic | 30.0% |
| ATTCCCAAAGAAACCATAAT+TGG | + | chr7_3:82611915-82611934 | Msa1130460:CDS | 30.0% | |
| TTCCCAAAGAAACCATAATT+GGG | + | chr7_3:82611916-82611935 | Msa1130460:CDS | 30.0% | |
| AACCCAATTATGGTTTCTTT+GGG | - | chr7_3:82611921-82611940 | None:intergenic | 30.0% | |
| AAACCCAATTATGGTTTCTT+TGG | - | chr7_3:82611922-82611941 | None:intergenic | 30.0% | |
| ! | TTCATCGGAAACTTTCTTTT+TGG | - | chr7_3:82611990-82612009 | None:intergenic | 30.0% |
| ! | CAAGTAACAACACTTTTCAT+CGG | - | chr7_3:82612005-82612024 | None:intergenic | 30.0% |
| ! | AAGTGTTGTTACTTGCAAAA+CGG | + | chr7_3:82612010-82612029 | Msa1130460:CDS | 30.0% |
| TATTTGAGCTGCTTATTTAC+TGG | - | chr7_3:82612740-82612759 | None:intergenic | 30.0% | |
| !! | TGAATCTAGCTCTAATGAAA+AGG | + | chr7_3:82613363-82613382 | Msa1130460:intron | 30.0% |
| !! | TGTGCACTACTTTTGAATTA+TGG | + | chr7_3:82613513-82613532 | Msa1130460:intron | 30.0% |
| ! | AATTTTCACATGACTAGAGT+AGG | + | chr7_3:82613857-82613876 | Msa1130460:intron | 30.0% |
| TATACTCAGCATTCATTTAG+TGG | + | chr7_3:82613882-82613901 | Msa1130460:intron | 30.0% | |
| TGGCAAATAATGAATTAGCT+AGG | + | chr7_3:82613902-82613921 | Msa1130460:intron | 30.0% | |
| ! | TGAATTAGCTAGGTTGAATT+AGG | + | chr7_3:82613912-82613931 | Msa1130460:intron | 30.0% |
| ! | GAATTCACCAACCATATTTT+TGG | + | chr7_3:82614005-82614024 | Msa1130460:intron | 30.0% |
| CTAATGTCCAAAAATATGGT+TGG | - | chr7_3:82614015-82614034 | None:intergenic | 30.0% | |
| CAAATAAACCAGTGGAAAAA+AGG | + | chr7_3:82614318-82614337 | Msa1130460:intron | 30.0% | |
| ! | CAGTATACAGTTTTGCAATT+TGG | + | chr7_3:82614349-82614368 | Msa1130460:intron | 30.0% |
| GCAAACAATCTCATCATAAT+TGG | - | chr7_3:82614379-82614398 | None:intergenic | 30.0% | |
| TGAACCATATAGCTAAGTTA+TGG | + | chr7_3:82614422-82614441 | Msa1130460:intron | 30.0% | |
| CTTTCCATAACTTAGCTATA+TGG | - | chr7_3:82614429-82614448 | None:intergenic | 30.0% | |
| CGTAAAATTTAGTCACAAAC+AGG | - | chr7_3:82614478-82614497 | None:intergenic | 30.0% | |
| TTACGCGTTCATATAATCAT+TGG | + | chr7_3:82614493-82614512 | Msa1130460:intron | 30.0% | |
| TACGCGTTCATATAATCATT+GGG | + | chr7_3:82614494-82614513 | Msa1130460:intron | 30.0% | |
| TTAGATATAACATGGAGATG+AGG | - | chr7_3:82614595-82614614 | None:intergenic | 30.0% | |
| !! | TTTGTTGATTTGCGAATACT+TGG | + | chr7_3:82614707-82614726 | Msa1130460:intron | 30.0% |
| ATGAAGAAACATAGTTCAAG+GGG | - | chr7_3:82614814-82614833 | None:intergenic | 30.0% | |
| CAATGAAGAAACATAGTTCA+AGG | - | chr7_3:82614816-82614835 | None:intergenic | 30.0% | |
| TTCCTTAAATTGGAAAGAAC+CGG | + | chr7_3:82614926-82614945 | Msa1130460:intron | 30.0% | |
| GTTTCAAACTAACAAAAGAC+TGG | - | chr7_3:82615103-82615122 | None:intergenic | 30.0% | |
| TTGTACAGAAATGATCACTT+GGG | + | chr7_3:82615201-82615220 | Msa1130460:intron | 30.0% | |
| CAAAAAACATTAGAGTAAGC+TGG | - | chr7_3:82615237-82615256 | None:intergenic | 30.0% | |
| ! | GTTAGTATTTCTGTAGTGTT+AGG | + | chr7_3:82615256-82615275 | Msa1130460:intron | 30.0% |
| ATTTCTGTAGTGTTAGGATA+TGG | + | chr7_3:82615262-82615281 | Msa1130460:intron | 30.0% | |
| CTAAAAAATTGTATTGGAGG+AGG | - | chr7_3:82615559-82615578 | None:intergenic | 30.0% | |
| GGGGAACTAAAAAATTGTAT+TGG | - | chr7_3:82615565-82615584 | None:intergenic | 30.0% | |
| ATACTAAACTCTCCTCATTT+GGG | - | chr7_3:82615586-82615605 | None:intergenic | 30.0% | |
| AATACTAAACTCTCCTCATT+TGG | - | chr7_3:82615587-82615606 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | - | chr7_3:82615644-82615663 | None:intergenic | 30.0% | |
| ! | GGTTATTGTTGTATTTCTGT+AGG | + | chr7_3:82615747-82615766 | Msa1130460:intron | 30.0% |
| TGTTGTATTTATGTAGGGTT+AGG | + | chr7_3:82615860-82615879 | Msa1130460:intron | 30.0% | |
| GTTGTATTTATGTAGGGTTA+GGG | + | chr7_3:82615861-82615880 | Msa1130460:intron | 30.0% | |
| TTGTATTTATGTAGGGTTAG+GGG | + | chr7_3:82615862-82615881 | Msa1130460:intron | 30.0% | |
| !!! | AGATCTATTGTCATTTTGTC+TGG | + | chr7_3:82615913-82615932 | Msa1130460:intron | 30.0% |
| CAGCATGAGTATAATGTAAA+TGG | + | chr7_3:82616311-82616330 | Msa1130460:three_prime_UTR | 30.0% | |
| !!! | AATGGAGATTTTTTTTCCTC+CGG | + | chr7_3:82616329-82616348 | Msa1130460:three_prime_UTR | 30.0% |
| GGACCATTTATATTTACTAC+CGG | - | chr7_3:82616351-82616370 | None:intergenic | 30.0% | |
| AAGTGAAAGGACAATGATGA+TGG | - | chr7_3:82611812-82611831 | None:intergenic | 35.0% | |
| TGAGAACAAGAAGTGGAAAT+GGG | - | chr7_3:82611854-82611873 | None:intergenic | 35.0% | |
| TTGAGAACAAGAAGTGGAAA+TGG | - | chr7_3:82611855-82611874 | None:intergenic | 35.0% | |
| AAGGGAATGAAACCCAATTA+TGG | - | chr7_3:82611931-82611950 | None:intergenic | 35.0% | |
| GTTTGATTGTTTGCGCAAAA+GGG | - | chr7_3:82611949-82611968 | None:intergenic | 35.0% | |
| TGTTTGATTGTTTGCGCAAA+AGG | - | chr7_3:82611950-82611969 | None:intergenic | 35.0% | |
| !! | TCAAACCCAACTTTTGTTTC+TGG | + | chr7_3:82612109-82612128 | Msa1130460:CDS | 35.0% |
| !! | CAAACCCAACTTTTGTTTCT+GGG | + | chr7_3:82612110-82612129 | Msa1130460:CDS | 35.0% |
| ACAACCCAGAAACAAAAGTT+GGG | - | chr7_3:82612117-82612136 | None:intergenic | 35.0% | |
| AACAACCCAGAAACAAAAGT+TGG | - | chr7_3:82612118-82612137 | None:intergenic | 35.0% | |
| !!! | TGTTGCTGATTCTCTTTTTC+CGG | + | chr7_3:82612291-82612310 | Msa1130460:CDS | 35.0% |
| ! | TTCTCTTTTTCCGGTTTCTT+TGG | + | chr7_3:82612300-82612319 | Msa1130460:CDS | 35.0% |
| ! | TCTCTTTTTCCGGTTTCTTT+GGG | + | chr7_3:82612301-82612320 | Msa1130460:CDS | 35.0% |
| ! | ATCCAATTTTACATCCTCTC+CGG | - | chr7_3:82612794-82612813 | None:intergenic | 35.0% |
| TGACAAAATCTGCATAGCTA+TGG | + | chr7_3:82612905-82612924 | Msa1130460:intron | 35.0% | |
| TATTAAGAGGTTAGGACTCT+AGG | + | chr7_3:82612957-82612976 | Msa1130460:intron | 35.0% | |
| CACATAGAATTGTGAGTTTG+AGG | + | chr7_3:82613047-82613066 | Msa1130460:intron | 35.0% | |
| CCATTCAACTGTTGCATATT+GGG | - | chr7_3:82613105-82613124 | None:intergenic | 35.0% | |
| ACCATTCAACTGTTGCATAT+TGG | - | chr7_3:82613106-82613125 | None:intergenic | 35.0% | |
| TAGTGCACAAAACATTAACC+TGG | + | chr7_3:82613146-82613165 | Msa1130460:intron | 35.0% | |
| AGTACAACATGGTTCACATT+TGG | - | chr7_3:82613209-82613228 | None:intergenic | 35.0% | |
| GTTAGATTCATTCACCTTGT+TGG | - | chr7_3:82613322-82613341 | None:intergenic | 35.0% | |
| AGCATAAGAAAGAGAATAGC+AGG | - | chr7_3:82613463-82613482 | None:intergenic | 35.0% | |
| CTCTTTCTTATGCTTAGTTG+TGG | + | chr7_3:82613469-82613488 | Msa1130460:intron | 35.0% | |
| AGTTATATCACTTAGAAGCC+AGG | - | chr7_3:82613808-82613827 | None:intergenic | 35.0% | |
| ! | AATTTGAGAACTGGTTCCTA+GGG | + | chr7_3:82613983-82614002 | Msa1130460:intron | 35.0% |
| TCACATACTCAGCATTCATT+TGG | + | chr7_3:82614102-82614121 | Msa1130460:intron | 35.0% | |
| ! | TGATGAAAGCTTCTGACTTT+TGG | - | chr7_3:82614182-82614201 | None:intergenic | 35.0% |
| ! | TCATTTTCCCTTTTTTCCAC+TGG | - | chr7_3:82614329-82614348 | None:intergenic | 35.0% |
| ATAGCTAAGTTATGGAAAGC+TGG | + | chr7_3:82614430-82614449 | Msa1130460:intron | 35.0% | |
| ATTGGGAGTCAAAATGATGA+TGG | + | chr7_3:82614511-82614530 | Msa1130460:intron | 35.0% | |
| ! | CTGAAGGAAGCTAAACATTT+TGG | + | chr7_3:82614556-82614575 | Msa1130460:intron | 35.0% |
| AAAAAATAAAGGGACCTCCA+AGG | - | chr7_3:82614635-82614654 | None:intergenic | 35.0% | |
| TGAAGAAACATAGTTCAAGG+GGG | - | chr7_3:82614813-82614832 | None:intergenic | 35.0% | |
| GTATAATGACAGTAAGATCG+AGG | + | chr7_3:82614895-82614914 | Msa1130460:intron | 35.0% | |
| ATCCGGTTCTTTCCAATTTA+AGG | - | chr7_3:82614931-82614950 | None:intergenic | 35.0% | |
| CTAGTCCACATATAGACATT+AGG | - | chr7_3:82615045-82615064 | None:intergenic | 35.0% | |
| GTGCTCCTAAATTATCAGTT+AGG | + | chr7_3:82615064-82615083 | Msa1130460:intron | 35.0% | |
| TCACGCCTAACTGATAATTT+AGG | - | chr7_3:82615072-82615091 | None:intergenic | 35.0% | |
| ATTTCAAGCATCTCTTGCTA+AGG | + | chr7_3:82615178-82615197 | Msa1130460:intron | 35.0% | |
| GTTGTACAGAAATGATCACT+TGG | + | chr7_3:82615200-82615219 | Msa1130460:intron | 35.0% | |
| GTGGAAAATATGAGGGAAAA+TGG | + | chr7_3:82615385-82615404 | Msa1130460:intron | 35.0% | |
| !!! | TTTTTTAGTTCCCCCAAATG+AGG | + | chr7_3:82615571-82615590 | Msa1130460:intron | 35.0% |
| TACTAAACTCTCCTCATTTG+GGG | - | chr7_3:82615585-82615604 | None:intergenic | 35.0% | |
| AGAAATAGAGGAAAATGGGA+GGG | - | chr7_3:82615640-82615659 | None:intergenic | 35.0% | |
| AAGAAATAGAGGAAAATGGG+AGG | - | chr7_3:82615641-82615660 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | - | chr7_3:82615645-82615664 | None:intergenic | 35.0% | |
| GGATCTCTAATGCAAATGAT+GGG | + | chr7_3:82615883-82615902 | Msa1130460:intron | 35.0% | |
| TGACCAGAAAATTGTGTGTA+TGG | + | chr7_3:82615981-82616000 | Msa1130460:intron | 35.0% | |
| AGAAAGCTAAAGGAACTTCT+TGG | + | chr7_3:82616065-82616084 | Msa1130460:CDS | 35.0% | |
| GGTAATATAATGCAACCTTC+TGG | + | chr7_3:82616224-82616243 | Msa1130460:three_prime_UTR | 35.0% | |
| GTGCTTGAATGATGAATACA+GGG | - | chr7_3:82616277-82616296 | None:intergenic | 35.0% | |
| TGTGCTTGAATGATGAATAC+AGG | - | chr7_3:82616278-82616297 | None:intergenic | 35.0% | |
| CCATTTATATTTACTACCGG+AGG | - | chr7_3:82616348-82616367 | None:intergenic | 35.0% | |
| CCTCCGGTAGTAAATATAAA+TGG | + | chr7_3:82616345-82616364 | Msa1130460:three_prime_UTR | 35.0% | |
| GAAGTTTGGAAGTTAGAGGA+AGG | - | chr7_3:82611790-82611809 | None:intergenic | 40.0% | |
| GATGGAAGTTTGGAAGTTAG+AGG | - | chr7_3:82611794-82611813 | None:intergenic | 40.0% | |
| !! | GGACAATGATGATGGAAGTT+TGG | - | chr7_3:82611804-82611823 | None:intergenic | 40.0% |
| ! | GGTGTTGAAGTGAAAGTGAA+AGG | - | chr7_3:82611825-82611844 | None:intergenic | 40.0% |
| ! | TGTTGTTACTTGCAAAACGG+AGG | + | chr7_3:82612013-82612032 | Msa1130460:CDS | 40.0% |
| TTACTTGCAAAACGGAGGTT+TGG | + | chr7_3:82612018-82612037 | Msa1130460:CDS | 40.0% | |
| TACTTGCAAAACGGAGGTTT+GGG | + | chr7_3:82612019-82612038 | Msa1130460:CDS | 40.0% | |
| !! | GGTCAAGATTAGTCCTTTTG+TGG | + | chr7_3:82612075-82612094 | Msa1130460:CDS | 40.0% |
| ! | TAGTCCTTTTGTGGCTACAT+TGG | + | chr7_3:82612084-82612103 | Msa1130460:CDS | 40.0% |
| TTGAGATTGTTCTGTGCTTC+TGG | + | chr7_3:82612202-82612221 | Msa1130460:CDS | 40.0% | |
| ! | CTCTTTTTCCGGTTTCTTTG+GGG | + | chr7_3:82612302-82612321 | Msa1130460:CDS | 40.0% |
| AGACTAAACCCCAAAGAAAC+CGG | - | chr7_3:82612313-82612332 | None:intergenic | 40.0% | |
| !! | ATTGGTGTTAGAAGACATGC+TGG | + | chr7_3:82612352-82612371 | Msa1130460:CDS | 40.0% |
| CATTTGCTTGAGCTTCTGTT+TGG | + | chr7_3:82612461-82612480 | Msa1130460:intron | 40.0% | |
| CCCAATATGCAACAGTTGAA+TGG | + | chr7_3:82613102-82613121 | Msa1130460:intron | 40.0% | |
| !! | ATTCACCTTGTTGGCTTGTT+GGG | - | chr7_3:82613313-82613332 | None:intergenic | 40.0% |
| CATTAGAGCTAGATTCAGCT+AGG | - | chr7_3:82613360-82613379 | None:intergenic | 40.0% | |
| GGTCAAACTGACAAATGACA+AGG | - | chr7_3:82613428-82613447 | None:intergenic | 40.0% | |
| ! | GTTGTGATTAGTTATGCGCA+AGG | - | chr7_3:82613755-82613774 | None:intergenic | 40.0% |
| ! | CAATTTGAGAACTGGTTCCT+AGG | + | chr7_3:82613982-82614001 | Msa1130460:intron | 40.0% |
| !! | ATATGGTTGGTGAATTCCCT+AGG | - | chr7_3:82614002-82614021 | None:intergenic | 40.0% |
| GATATTTCCCATAAGGCTGA+AGG | + | chr7_3:82614038-82614057 | Msa1130460:intron | 40.0% | |
| ! | TCGTTGGAAGCATATGGATA+TGG | + | chr7_3:82614064-82614083 | Msa1130460:intron | 40.0% |
| ! | CGTTGGAAGCATATGGATAT+GGG | + | chr7_3:82614065-82614084 | Msa1130460:intron | 40.0% |
| CATACTCAGCATTCATTTGG+TGG | + | chr7_3:82614105-82614124 | Msa1130460:intron | 40.0% | |
| ! | AATGAACTGGGTTGAACCTT+TGG | + | chr7_3:82614140-82614159 | Msa1130460:intron | 40.0% |
| AACCTCATAAACATCCACCT+TGG | + | chr7_3:82614615-82614634 | Msa1130460:intron | 40.0% | |
| !!! | GGAGGTCCCTTTATTTTTTG+TGG | + | chr7_3:82614636-82614655 | Msa1130460:intron | 40.0% |
| !! | TACTTGGTTTTCTCCTGTCT+TGG | + | chr7_3:82614723-82614742 | Msa1130460:intron | 40.0% |
| AAATTCATAGCCACCAAGAC+AGG | - | chr7_3:82614739-82614758 | None:intergenic | 40.0% | |
| !!! | GCTTTTGAAGCAGACTACTT+TGG | + | chr7_3:82614864-82614883 | Msa1130460:intron | 40.0% |
| TCGTGCCTAATGTCTATATG+TGG | + | chr7_3:82615037-82615056 | Msa1130460:intron | 40.0% | |
| GCAGATGGAGAAAGATATGT+TGG | - | chr7_3:82615125-82615144 | None:intergenic | 40.0% | |
| TCGCAAACAAAGCCTAAGTT+GGG | - | chr7_3:82615331-82615350 | None:intergenic | 40.0% | |
| !! | TTAGGCTTTGTTTGCGAGTT+TGG | + | chr7_3:82615334-82615353 | Msa1130460:intron | 40.0% |
| TTTGAGGGGTGGAAAATATG+AGG | + | chr7_3:82615377-82615396 | Msa1130460:intron | 40.0% | |
| TTGAGGGGTGGAAAATATGA+GGG | + | chr7_3:82615378-82615397 | Msa1130460:intron | 40.0% | |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | - | chr7_3:82615551-82615570 | None:intergenic | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | - | chr7_3:82615552-82615571 | None:intergenic | 40.0% |
| ACTAAACTCTCCTCATTTGG+GGG | - | chr7_3:82615584-82615603 | None:intergenic | 40.0% | |
| GAAATAGAGGAAAATGGGAG+GGG | - | chr7_3:82615639-82615658 | None:intergenic | 40.0% | |
| TGAGCAAGTGGAAGAAATAG+AGG | - | chr7_3:82615652-82615671 | None:intergenic | 40.0% | |
| GGAAAAAAGGAATGAGCAAG+TGG | - | chr7_3:82615664-82615683 | None:intergenic | 40.0% | |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | - | chr7_3:82615710-82615729 | None:intergenic | 40.0% |
| AACAAAGCCTTAGTGGGATA+AGG | + | chr7_3:82615718-82615737 | Msa1130460:intron | 40.0% | |
| ! | AAGTCTTATCCCACTAAGTG+GGG | - | chr7_3:82615828-82615847 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCCCACTAAGT+GGG | - | chr7_3:82615829-82615848 | None:intergenic | 40.0% |
| GGGATCTCTAATGCAAATGA+TGG | + | chr7_3:82615882-82615901 | Msa1130460:intron | 40.0% | |
| !! | GTCATTTTGTCTGGATTCTG+TGG | + | chr7_3:82615922-82615941 | Msa1130460:intron | 40.0% |
| ! | CAGCCATACACACAATTTTC+TGG | - | chr7_3:82615987-82616006 | None:intergenic | 40.0% |
| CAGAAAATTGTGTGTATGGC+TGG | + | chr7_3:82615985-82616004 | Msa1130460:intron | 40.0% | |
| ACAGGTGCTTAACATGATTC+TGG | + | chr7_3:82616010-82616029 | Msa1130460:intron | 40.0% | |
| ! | ATTCTGGCTGACATGTTTCA+AGG | + | chr7_3:82616026-82616045 | Msa1130460:CDS | 40.0% |
| ! | TTCTGGCTGACATGTTTCAA+GGG | + | chr7_3:82616027-82616046 | Msa1130460:CDS | 40.0% |
| GGCTACTAAAAATCCAAGCA+GGG | - | chr7_3:82616120-82616139 | None:intergenic | 40.0% | |
| AGGCTACTAAAAATCCAAGC+AGG | - | chr7_3:82616121-82616140 | None:intergenic | 40.0% | |
| ATAGGGGATACTATTTGCTC+TGG | + | chr7_3:82616203-82616222 | Msa1130460:three_prime_UTR | 40.0% | |
| GGTACGTTTCATATACCAGA+AGG | - | chr7_3:82616242-82616261 | None:intergenic | 40.0% | |
| ! | AATACAGGGCACTAACTATG+CGG | - | chr7_3:82616263-82616282 | None:intergenic | 40.0% |
| AGAAGTGGAAATGGGTCTGA+GGG | - | chr7_3:82611846-82611865 | None:intergenic | 45.0% | |
| AAGAAGTGGAAATGGGTCTG+AGG | - | chr7_3:82611847-82611866 | None:intergenic | 45.0% | |
| ATGCGTAACGACGAATGCAA+AGG | + | chr7_3:82612054-82612073 | Msa1130460:CDS | 45.0% | |
| GAAGCCAATGTAGCCACAAA+AGG | - | chr7_3:82612091-82612110 | None:intergenic | 45.0% | |
| !! | TTGTTTCTGGGTTGTTTGCG+TGG | + | chr7_3:82612122-82612141 | Msa1130460:CDS | 45.0% |
| AGATTGTTCTGTGCTTCTGG+AGG | + | chr7_3:82612205-82612224 | Msa1130460:CDS | 45.0% | |
| GATTGTTCTGTGCTTCTGGA+GGG | + | chr7_3:82612206-82612225 | Msa1130460:CDS | 45.0% | |
| CATAGCGCAGAATGAGAAGA+AGG | - | chr7_3:82612235-82612254 | None:intergenic | 45.0% | |
| ACTTCAGTTGCTCTCTGTCA+TGG | + | chr7_3:82612268-82612287 | Msa1130460:CDS | 45.0% | |
| ATCCAAACATGTCCTCAGTG+TGG | + | chr7_3:82612765-82612784 | Msa1130460:intron | 45.0% | |
| GACCGGAGAGGATGTAAAAT+TGG | + | chr7_3:82612789-82612808 | Msa1130460:intron | 45.0% | |
| AAACAAGTGCTACAACTGCC+AGG | - | chr7_3:82613167-82613186 | None:intergenic | 45.0% | |
| GGTTGAGACTCAGTACAACA+TGG | - | chr7_3:82613220-82613239 | None:intergenic | 45.0% | |
| TGACTTCATTTATGCCGGGA+GGG | - | chr7_3:82613241-82613260 | None:intergenic | 45.0% | |
| TCCCGGCATAAATGAAGTCA+CGG | + | chr7_3:82613241-82613260 | Msa1130460:intron | 45.0% | |
| TGCCGTGACTTCATTTATGC+CGG | - | chr7_3:82613246-82613265 | None:intergenic | 45.0% | |
| ATGAACCCAACAAGCCAACA+AGG | + | chr7_3:82613305-82613324 | Msa1130460:intron | 45.0% | |
| !! | CATTCACCTTGTTGGCTTGT+TGG | - | chr7_3:82613314-82613333 | None:intergenic | 45.0% |
| GAATAAAGGACGAAGGGACT+AGG | - | chr7_3:82613390-82613409 | None:intergenic | 45.0% | |
| GTGAACTCTTACGAGTCTAC+TGG | + | chr7_3:82613670-82613689 | Msa1130460:intron | 45.0% | |
| TTGCAACAAAGCTGTTCACC+TGG | + | chr7_3:82613787-82613806 | Msa1130460:intron | 45.0% | |
| ! | ACGAACACCTTCAGCCTTAT+GGG | - | chr7_3:82614048-82614067 | None:intergenic | 45.0% |
| AACGAACACCTTCAGCCTTA+TGG | - | chr7_3:82614049-82614068 | None:intergenic | 45.0% | |
| !! | ATAAGGCTGAAGGTGTTCGT+TGG | + | chr7_3:82614048-82614067 | Msa1130460:intron | 45.0% |
| ! | AGGTGTTCGTTGGAAGCATA+TGG | + | chr7_3:82614058-82614077 | Msa1130460:intron | 45.0% |
| CTCCAAGGTGGATGTTTATG+AGG | - | chr7_3:82614620-82614639 | None:intergenic | 45.0% | |
| CTCATAAACATCCACCTTGG+AGG | + | chr7_3:82614618-82614637 | Msa1130460:intron | 45.0% | |
| AAATAAAGGGACCTCCAAGG+TGG | - | chr7_3:82614632-82614651 | None:intergenic | 45.0% | |
| !! | TTGGTTTTCTCCTGTCTTGG+TGG | + | chr7_3:82614726-82614745 | Msa1130460:intron | 45.0% |
| ! | AAACAAAGCCTAAGTTGGGG+CGG | - | chr7_3:82615327-82615346 | None:intergenic | 45.0% |
| CGCAAACAAAGCCTAAGTTG+GGG | - | chr7_3:82615330-82615349 | None:intergenic | 45.0% | |
| CTCGCAAACAAAGCCTAAGT+TGG | - | chr7_3:82615332-82615351 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr7_3:82615338-82615357 | Msa1130460:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr7_3:82615339-82615358 | Msa1130460:intron | 45.0% |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | - | chr7_3:82615550-82615569 | None:intergenic | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr7_3:82615339-82615358 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr7_3:82615338-82615357 | None:intergenic | 45.0% |
| ACTCGCAAACAAAGCCTTAG+TGG | + | chr7_3:82615711-82615730 | Msa1130460:intron | 45.0% | |
| CTCGCAAACAAAGCCTTAGT+GGG | + | chr7_3:82615712-82615731 | Msa1130460:intron | 45.0% | |
| ! | CCAAGTCTTATCCCACTAAG+TGG | - | chr7_3:82615830-82615849 | None:intergenic | 45.0% |
| CCACTTAGTGGGATAAGACT+TGG | + | chr7_3:82615827-82615846 | Msa1130460:intron | 45.0% | |
| ACCAGCAAACACTTGAGATG+GGG | - | chr7_3:82616096-82616115 | None:intergenic | 45.0% | |
| CACCAGCAAACACTTGAGAT+GGG | - | chr7_3:82616097-82616116 | None:intergenic | 45.0% | |
| !! | TTAAAATTATTATAGAATAA+AGG | - | chr7_3:82613404-82613423 | None:intergenic | 5.0% |
| GCAAAACGGAGGTTTGGGAA+TGG | + | chr7_3:82612024-82612043 | Msa1130460:CDS | 50.0% | |
| TGGGTTGTTTGCGTGGTTTG+TGG | + | chr7_3:82612129-82612148 | Msa1130460:CDS | 50.0% | |
| CTCCACACTGAGGACATGTT+TGG | - | chr7_3:82612770-82612789 | None:intergenic | 50.0% | |
| GTGACTTCATTTATGCCGGG+AGG | - | chr7_3:82613242-82613261 | None:intergenic | 50.0% | |
| GCCGTGACTTCATTTATGCC+GGG | - | chr7_3:82613245-82613264 | None:intergenic | 50.0% | |
| CTTCAGTCACAGTCACACTG+AGG | - | chr7_3:82614542-82614561 | None:intergenic | 50.0% | |
| CTCAGTGTGACTGTGACTGA+AGG | + | chr7_3:82614540-82614559 | Msa1130460:intron | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr7_3:82615337-82615356 | Msa1130460:intron | 50.0% |
| AGGGGAAGGGAAAGGTTTGA+GGG | + | chr7_3:82615362-82615381 | Msa1130460:intron | 50.0% | |
| !!! | GGGTTTTGGGGGTTTTTGGA+GGG | - | chr7_3:82615538-82615557 | None:intergenic | 50.0% |
| !!! | AGGGTTTTGGGGGTTTTTGG+AGG | - | chr7_3:82615539-82615558 | None:intergenic | 50.0% |
| !!! | AGGAGGGTTTTGGGGGTTTT+TGG | - | chr7_3:82615542-82615561 | None:intergenic | 50.0% |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | - | chr7_3:82615549-82615568 | None:intergenic | 50.0% |
| TAGAGGAAAATGGGAGGGGA+GGG | - | chr7_3:82615635-82615654 | None:intergenic | 50.0% | |
| ATAGAGGAAAATGGGAGGGG+AGG | - | chr7_3:82615636-82615655 | None:intergenic | 50.0% | |
| AGGGGAAGGCTTGGGAAAAA+AGG | - | chr7_3:82615677-82615696 | None:intergenic | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | - | chr7_3:82615700-82615719 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr7_3:82615337-82615356 | None:intergenic | 50.0% |
| AGCCTTAGTGGGATAAGGCT+CGG | + | chr7_3:82615723-82615742 | Msa1130460:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr7_3:82615824-82615843 | None:intergenic | 50.0% | |
| TTGTGTGTATGGCTGGACAC+AGG | + | chr7_3:82615992-82616011 | Msa1130460:intron | 50.0% | |
| ACCCCATCTCAAGTGTTTGC+TGG | + | chr7_3:82616092-82616111 | Msa1130460:CDS | 50.0% | |
| GCACCAGCAAACACTTGAGA+TGG | - | chr7_3:82616098-82616117 | None:intergenic | 50.0% | |
| ACAACCTTGGCAGCAGAAAC+AGG | - | chr7_3:82616141-82616160 | None:intergenic | 50.0% | |
| TGCCAAGGTTGTGTTGTGGT+GGG | + | chr7_3:82616149-82616168 | Msa1130460:CDS | 50.0% | |
| AACCCACCACAACACAACCT+TGG | - | chr7_3:82616154-82616173 | None:intergenic | 50.0% | |
| !! | AGGTTGTGTTGTGGTGGGTT+AGG | + | chr7_3:82616154-82616173 | Msa1130460:CDS | 50.0% |
| !! | TTGTGGTGGGTTAGGTCGTT+AGG | + | chr7_3:82616162-82616181 | Msa1130460:exon | 50.0% |
| GGGTTAGGTCGTTAGGACTT+AGG | + | chr7_3:82616169-82616188 | Msa1130460:exon | 50.0% | |
| ACATGCTGGCATGCAAGCTC+AGG | + | chr7_3:82612366-82612385 | Msa1130460:CDS | 55.0% | |
| CATGTCCTCAGTGTGGAGAC+CGG | + | chr7_3:82612772-82612791 | Msa1130460:intron | 55.0% | |
| GTACTGAGTCTCAACCCTCC+CGG | + | chr7_3:82613224-82613243 | Msa1130460:intron | 55.0% | |
| TGTTTGCGAGTTTGGAGGGG+AGG | + | chr7_3:82615342-82615361 | Msa1130460:intron | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+GGG | + | chr7_3:82615343-82615362 | Msa1130460:intron | 55.0% | |
| TTTGCGAGTTTGGAGGGGAG+GGG | + | chr7_3:82615344-82615363 | Msa1130460:intron | 55.0% | |
| GAGGGGAAGGGAAAGGTTTG+AGG | + | chr7_3:82615361-82615380 | Msa1130460:intron | 55.0% | |
| GGGGAAGGGAAAGGTTTGAG+GGG | + | chr7_3:82615363-82615382 | Msa1130460:intron | 55.0% | |
| GAAGGGAAAGGTTTGAGGGG+TGG | + | chr7_3:82615366-82615385 | Msa1130460:intron | 55.0% | |
| AAATGGGAGGGGAGGGCTTT+GGG | - | chr7_3:82615628-82615647 | None:intergenic | 55.0% | |
| AAAATGGGAGGGGAGGGCTT+TGG | - | chr7_3:82615629-82615648 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | - | chr7_3:82615343-82615362 | None:intergenic | 55.0% | |
| ! | CACCGAGCCTTATCCCACTA+AGG | - | chr7_3:82615728-82615747 | None:intergenic | 55.0% |
| CTTAGTGGGATAAGGCTCGG+TGG | + | chr7_3:82615726-82615745 | Msa1130460:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+CGG | - | chr7_3:82615816-82615835 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr7_3:82615816-82615835 | Msa1130460:intron | 55.0% | |
| !! | GTAGCCTGTTTCTGCTGCCA+AGG | + | chr7_3:82616134-82616153 | Msa1130460:CDS | 55.0% |
| CTGCTGCCAAGGTTGTGTTG+TGG | + | chr7_3:82616145-82616164 | Msa1130460:CDS | 55.0% | |
| CTGCCAAGGTTGTGTTGTGG+TGG | + | chr7_3:82616148-82616167 | Msa1130460:CDS | 55.0% | |
| ! | CCTAAGTTGGGGCGGCTACA+TGG | - | chr7_3:82615319-82615338 | None:intergenic | 60.0% |
| CCATGTAGCCGCCCCAACTT+AGG | + | chr7_3:82615316-82615335 | Msa1130460:intron | 60.0% | |
| GAGTTTGGAGGGGAGGGGAA+GGG | + | chr7_3:82615349-82615368 | Msa1130460:intron | 60.0% | |
| AATGGGAGGGGAGGGCTTTG+GGG | - | chr7_3:82615627-82615646 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | - | chr7_3:82615695-82615714 | None:intergenic | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | - | chr7_3:82615696-82615715 | None:intergenic | 60.0% | |
| GTGTAGCCGACCCCACTTAG+TGG | + | chr7_3:82615815-82615834 | Msa1130460:intron | 60.0% | |
| ! | GTGTTTGCTGGTGCCCTGCT+TGG | + | chr7_3:82616104-82616123 | Msa1130460:CDS | 60.0% |
| CCTCTCCGGTCTCCACACTG+AGG | - | chr7_3:82612780-82612799 | None:intergenic | 65.0% | |
| CCTCAGTGTGGAGACCGGAG+AGG | + | chr7_3:82612777-82612796 | Msa1130460:intron | 65.0% | |
| CGAGTTTGGAGGGGAGGGGA+AGG | + | chr7_3:82615348-82615367 | Msa1130460:intron | 65.0% | |
| TGGAGGGGAGGGGAAGGGAA+AGG | + | chr7_3:82615354-82615373 | Msa1130460:intron | 65.0% | |
| ! | ATGGGAGGGGAGGGCTTTGG+GGG | - | chr7_3:82615626-82615645 | None:intergenic | 65.0% |
| GGGAAGGGAGGGGAAGGCTT+GGG | - | chr7_3:82615685-82615704 | None:intergenic | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | - | chr7_3:82615691-82615710 | None:intergenic | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | - | chr7_3:82615697-82615716 | None:intergenic | 65.0% | |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | - | chr7_3:82615625-82615644 | None:intergenic | 70.0% |
| GGGGAAGGGAGGGGAAGGCT+TGG | - | chr7_3:82615686-82615705 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 82611684 | 82616372 | 82611684 | ID=Msa1130460;Name=Msa1130460 |
| chr7_3 | mRNA | 82611684 | 82616372 | 82611684 | ID=Msa1130460-mRNA-1;Parent=Msa1130460;Name=Msa1130460-mRNA-1;_AED=0.00;_eAED=0.00;_QI=89|1|1|1|1|1|2|197|258 |
| chr7_3 | exon | 82611684 | 82612387 | 82611684 | ID=Msa1130460-mRNA-1:exon:24399;Parent=Msa1130460-mRNA-1 |
| chr7_3 | exon | 82616014 | 82616372 | 82616014 | ID=Msa1130460-mRNA-1:exon:24400;Parent=Msa1130460-mRNA-1 |
| chr7_3 | five_prime_UTR | 82611684 | 82611772 | 82611684 | ID=Msa1130460-mRNA-1:five_prime_utr;Parent=Msa1130460-mRNA-1 |
| chr7_3 | CDS | 82611773 | 82612387 | 82611773 | ID=Msa1130460-mRNA-1:cds;Parent=Msa1130460-mRNA-1 |
| chr7_3 | CDS | 82616014 | 82616175 | 82616014 | ID=Msa1130460-mRNA-1:cds;Parent=Msa1130460-mRNA-1 |
| chr7_3 | three_prime_UTR | 82616176 | 82616372 | 82616176 | ID=Msa1130460-mRNA-1:three_prime_utr;Parent=Msa1130460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
