AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1440980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440980 MtrunA17_Chr3g0122151 98.454 582 9 0 1 582 1 582 0.0 1189
Msa1440980 MtrunA17_Chr1g0190941 30.943 530 327 10 82 579 41 563 1.37e-75 251
Msa1440980 MtrunA17_Chr6g0466641 94.000 50 3 0 220 269 40 89 7.07e-27 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440980 AT4G14210.1 80.034 581 98 2 1 581 1 563 0.0 974
Msa1440980 AT4G14210.3 80.034 581 98 2 1 581 1 563 0.0 974
Msa1440980 AT4G14210.2 80.034 581 98 2 1 581 1 563 0.0 974
Msa1440980 AT3G04870.3 30.467 535 333 10 80 582 24 551 3.05e-74 247
Msa1440980 AT3G04870.1 30.467 535 333 10 80 582 24 551 3.05e-74 247
Msa1440980 AT3G04870.4 30.467 535 333 10 80 582 24 551 3.05e-74 247
Msa1440980 AT3G04870.2 30.467 535 333 10 80 582 24 551 3.05e-74 247

Find 167 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAAGGTGCTGTTCTTTC+TGG 0.035606 tig0029172:+18965 Msa1440980:CDS
CCAAATTTAAATTGGCAAAT+TGG 0.140773 tig0029172:+12811 Msa1440980:CDS
CCAATTTGCCAATTTAAATT+TGG 0.165817 tig0029172:-12811 None:intergenic
TGCATAAATTTAAAAGAAAA+AGG 0.170173 tig0029172:-19757 None:intergenic
CCTAATGTGCAGAACCTATT+TGG 0.185482 tig0029172:+14969 Msa1440980:CDS
CCAAATAGGTTCTGCACATT+AGG 0.214847 tig0029172:-14969 None:intergenic
ACAAGATTTGAAGAAAATTC+TGG 0.216400 tig0029172:+19475 Msa1440980:three_prime_UTR
GGACGACACGGTTCACAATT+TGG 0.225775 tig0029172:-18872 None:intergenic
TATCATCACCAAATTTAAAT+TGG 0.232393 tig0029172:+12803 Msa1440980:CDS
GAATGTCAAAACCAGGAATA+TGG 0.236690 tig0029172:+15831 Msa1440980:intron
CATCAGGGTTGATGAAGTTT+AGG 0.247509 tig0029172:-16781 None:intergenic
TTCTCCAATCTCTGGAAATA+AGG 0.270191 tig0029172:-17406 None:intergenic
CAGGTTCCCGACAAATATTT+AGG 0.277509 tig0029172:+19593 Msa1440980:three_prime_UTR
ATCTTTCAAATGGCTCTATA+TGG 0.284716 tig0029172:+12775 Msa1440980:exon
GTCCTTCCATCTCCGTTAAA+TGG 0.287399 tig0029172:+15092 Msa1440980:CDS
ATTGGCATACAAAGTCTTTC+AGG 0.290671 tig0029172:-17093 None:intergenic
CTTGTCAACTGCAAAGTATT+TGG 0.292863 tig0029172:+13927 Msa1440980:CDS
TGCTTTAAACCGATTTCTTC+AGG 0.303456 tig0029172:+16829 Msa1440980:CDS
CAAATTTAAATTGGCAAATT+GGG 0.316027 tig0029172:+12812 Msa1440980:CDS
CTCGTTCTGCTAAGTGTAAC+AGG 0.317758 tig0029172:+12956 Msa1440980:CDS
CATGGCTACAAAGAAAATAA+AGG 0.325248 tig0029172:-19684 None:intergenic
ATCAGGGTTGATGAAGTTTA+GGG 0.330792 tig0029172:-16780 None:intergenic
TAATACCGAGTTCTCCAAAT+AGG 0.340651 tig0029172:-14983 None:intergenic
TGTTGATCATATTAAGTCCT+TGG 0.349779 tig0029172:+17116 Msa1440980:CDS
CATTGCATTGAAAGTTCATC+AGG 0.356309 tig0029172:-16797 None:intergenic
CCTTTGAAGGTTGTTATTGC+TGG 0.358480 tig0029172:+13111 Msa1440980:CDS
AACGGAGATGGAAGGACTTC+GGG 0.360693 tig0029172:-15086 None:intergenic
GGTTCCTTATTTCCAGAGAT+TGG 0.362086 tig0029172:+17402 Msa1440980:CDS
TGGAAGGTGCTGTTCTTTCT+GGG 0.364685 tig0029172:+18966 Msa1440980:CDS
TTACAAAGATCTCCTATAGA+AGG 0.366307 tig0029172:+18896 Msa1440980:CDS
GAGAAAATCAAATTTGCAAT+TGG 0.368454 tig0029172:+15890 Msa1440980:CDS
CTGCTAAGTGTAACAGGTTA+AGG 0.368537 tig0029172:+12962 Msa1440980:CDS
TCTCTTGCCTCCAGCAATAT+AGG 0.371739 tig0029172:-13967 None:intergenic
AGCTTCTTCTTCCTGAGAAC+TGG 0.374557 tig0029172:+17374 Msa1440980:CDS
CAGAGATTGGAGAAATTAGT+TGG 0.375058 tig0029172:+17415 Msa1440980:CDS
TCTTACAACTTACCATTTAA+CGG 0.376250 tig0029172:-15104 None:intergenic
TCATATCAACTTTGAGGACT+TGG 0.379367 tig0029172:+19514 Msa1440980:three_prime_UTR
AGGTTCATTTAAGATGTGTT+GGG 0.379707 tig0029172:-12641 None:intergenic
TGTCGGCATATACACTTAGA+AGG 0.381014 tig0029172:-18217 None:intergenic
ATAGAAGGTTTCTATTTAGC+TGG 0.382408 tig0029172:+18911 Msa1440980:CDS
AGGGCTCACATTTCATGTAT+TGG 0.386920 tig0029172:-19664 None:intergenic
CAAATAGGTTCTGCACATTA+GGG 0.391703 tig0029172:-14968 None:intergenic
TCGTCCTACTAAACCTTTGA+AGG 0.392812 tig0029172:+13098 Msa1440980:CDS
AGGTTCCCGACAAATATTTA+GGG 0.393381 tig0029172:+19594 Msa1440980:three_prime_UTR
GCTAAATAGAAACCTTCTAT+AGG 0.394425 tig0029172:-18908 None:intergenic
TCCAGCTATGCTTGGTGGAC+AGG 0.394576 tig0029172:+15919 Msa1440980:CDS
CTGGAGGCAAGAGATGTTCT+AGG 0.395758 tig0029172:+13976 Msa1440980:CDS
CCGACAAATATTTAGGGAAA+AGG 0.396111 tig0029172:+19600 Msa1440980:three_prime_UTR
AGCTCCAACATAGACTGGTT+TGG 0.397906 tig0029172:-18560 None:intergenic
GAACCATGGTTCTCCTTTGA+AGG 0.397907 tig0029172:+12984 Msa1440980:CDS
AAGCCACCACGCCACTCTAT+AGG 0.405794 tig0029172:-12661 None:intergenic
AATTTCATCAGGGAAGAGTT+TGG 0.406914 tig0029172:-18657 None:intergenic
GTTGATCATATTAAGTCCTT+GGG 0.407750 tig0029172:+17117 Msa1440980:CDS
GCTCCAACATAGACTGGTTT+GGG 0.410701 tig0029172:-18559 None:intergenic
TGGTCTGCAGAAATTTCATC+AGG 0.414527 tig0029172:-18668 None:intergenic
TTCTGGGAAGCTTTGTGCAC+AGG 0.415482 tig0029172:+18982 Msa1440980:CDS
CAACTAATTTCTCCAATCTC+TGG 0.419741 tig0029172:-17414 None:intergenic
TTTGCTATGCCAAGCAAGCC+TGG 0.419808 tig0029172:+15041 Msa1440980:CDS
CAAATTATCCCAGGACTGGC+TGG 0.420113 tig0029172:+13904 Msa1440980:intron
ACAACCTTCAAAGGTTTAGT+AGG 0.422656 tig0029172:-13102 None:intergenic
TTCTTCCTGAGAACTGGAAA+GGG 0.422658 tig0029172:+17380 Msa1440980:CDS
TTCGGAGCTACTTGCTGCTC+GGG 0.427072 tig0029172:+19412 Msa1440980:CDS
ATGATCACCTTCTCTTTAGC+AGG 0.428507 tig0029172:+17968 Msa1440980:CDS
CAAGATTTGAAGAAAATTCT+GGG 0.434521 tig0029172:+19476 Msa1440980:three_prime_UTR
GCCTGTCCACCAAGCATAGC+TGG 0.434812 tig0029172:-15920 None:intergenic
GGACTTCTTCCAGCTATGCT+TGG 0.441227 tig0029172:+15911 Msa1440980:CDS
CAAAGAATGGATGAGAAAAC+AGG 0.441574 tig0029172:+15973 Msa1440980:CDS
ATGGCTACAAAGAAAATAAA+GGG 0.441842 tig0029172:-19683 None:intergenic
TAGGTTCATTTAAGATGTGT+TGG 0.452032 tig0029172:-12642 None:intergenic
TTCTATAGGAGATCTTTGTA+AGG 0.454623 tig0029172:-18894 None:intergenic
GGAACCCCTTTCCAGTTCTC+AGG 0.455491 tig0029172:-17385 None:intergenic
ACTTCATCAGTTACACGTTC+AGG 0.456230 tig0029172:-16737 None:intergenic
TGGTCACAAGCCTATATTGC+TGG 0.460096 tig0029172:+13957 Msa1440980:CDS
CATATCAACTTTGAGGACTT+GGG 0.460746 tig0029172:+19515 Msa1440980:three_prime_UTR
CTTCTTCCAGCTATGCTTGG+TGG 0.472514 tig0029172:+15914 Msa1440980:CDS
AACTTACCATTTAACGGAGA+TGG 0.472864 tig0029172:-15098 None:intergenic
ATGATCGCACCTGAAGAAAT+CGG 0.473348 tig0029172:-16838 None:intergenic
CGTAGTGACGAAGATATTAT+CGG 0.474484 tig0029172:+18614 Msa1440980:CDS
CAGTCATAAATGTTCACATA+TGG 0.481049 tig0029172:+17443 Msa1440980:CDS
GACTTAATATGATCAACAAT+TGG 0.481712 tig0029172:-17111 None:intergenic
ATGGTATTTCTGTCAAAGAA+TGG 0.490346 tig0029172:+15960 Msa1440980:CDS
ATTCGGAGCTACTTGCTGCT+CGG 0.494416 tig0029172:+19411 Msa1440980:CDS
CGACATGTCAGTAACTTGTA+AGG 0.497117 tig0029172:+18235 Msa1440980:CDS
AATTGATAAAGTGACTCAAA+TGG 0.498942 tig0029172:-19560 None:intergenic
TTGGCATACAAAGTCTTTCA+GGG 0.499721 tig0029172:-17092 None:intergenic
GGAGCATCATATCAACTTTG+AGG 0.501921 tig0029172:+19508 Msa1440980:three_prime_UTR
GCAAAGTATTTGGCAGATGC+TGG 0.502628 tig0029172:+13937 Msa1440980:CDS
TTATCAATTCATACGAAGAC+AGG 0.503878 tig0029172:+19574 Msa1440980:three_prime_UTR
GAAAATTCTGGGAAGAGTAC+AGG 0.507260 tig0029172:+19487 Msa1440980:three_prime_UTR
TAACGGAGATGGAAGGACTT+CGG 0.507431 tig0029172:-15087 None:intergenic
CTAAACTCTCCAGGCTTGCT+TGG 0.507606 tig0029172:-15050 None:intergenic
AAGGTTGTTATTGCTGGTGC+AGG 0.509252 tig0029172:+13117 Msa1440980:CDS
AATGTCAAAACCAGGAATAT+GGG 0.509571 tig0029172:+15832 Msa1440980:intron
CGTGAAATCCATTCTTCGGC+TGG 0.510478 tig0029172:-18593 None:intergenic
ACTAATGGGAAGGTGATTGA+AGG 0.510915 tig0029172:+17216 Msa1440980:CDS
AAGAAATGAAGACTAGTTGG+TGG 0.512044 tig0029172:-12686 None:intergenic
CTTCTTCCTGAGAACTGGAA+AGG 0.513099 tig0029172:+17379 Msa1440980:CDS
TTGTGCACAGGCTATTGTAC+AGG 0.515353 tig0029172:+18994 Msa1440980:CDS
ACTACGTGAAATCCATTCTT+CGG 0.523388 tig0029172:-18597 None:intergenic
CATATGTGAACATTTATGAC+TGG 0.523869 tig0029172:-17442 None:intergenic
TCAAATCGACTAAACTCTCC+AGG 0.527394 tig0029172:-15059 None:intergenic
ATATGAGTTCATAGAAGAAG+AGG 0.532317 tig0029172:-12857 None:intergenic
GAGAAGAAATGAAGACTAGT+TGG 0.535144 tig0029172:-12689 None:intergenic
GAGAACTCGGTATTAATGAT+CGG 0.535933 tig0029172:+14991 Msa1440980:CDS
CTAATGGGAAGGTGATTGAA+GGG 0.538438 tig0029172:+17217 Msa1440980:CDS
TTTCAATGGGTCTTAACTTG+AGG 0.539434 tig0029172:+12911 Msa1440980:CDS
AAACCAGTCTATGTTGGAGC+TGG 0.540788 tig0029172:+18562 Msa1440980:CDS
GCTTATGTGTCTGCAGCACC+AGG 0.544521 tig0029172:+17243 Msa1440980:CDS
TAATGATCGGTTACAATGGA+AGG 0.545218 tig0029172:+15004 Msa1440980:CDS
AAATATTTAGCTTCTATGGA+AGG 0.551139 tig0029172:+18950 Msa1440980:CDS
CAGGAATATGGGCAATCTTG+AGG 0.552469 tig0029172:+15843 Msa1440980:intron
CCAGCAATAACAACCTTCAA+AGG 0.553145 tig0029172:-13111 None:intergenic
GGAGAAGCATGGTTCTAAGA+TGG 0.554962 tig0029172:+17050 Msa1440980:intron
ATATCAACTTTGAGGACTTG+GGG 0.555063 tig0029172:+19516 Msa1440980:three_prime_UTR
GGAAAGATGAAGATGGAGAC+TGG 0.557017 tig0029172:+14299 Msa1440980:CDS
CAGAACCTATTTGGAGAACT+CGG 0.557140 tig0029172:+14978 Msa1440980:CDS
AATGAAATTGAAAAGAGTAA+TGG 0.558061 tig0029172:-12735 None:intergenic
GGTTCATTTAAGATGTGTTG+GGG 0.561473 tig0029172:-12640 None:intergenic
TCAATGCAAACAACCTTCAA+AGG 0.562970 tig0029172:-12997 None:intergenic
AAACCAGCTCCAACATAGAC+TGG 0.564256 tig0029172:-18565 None:intergenic
AAGAGATGTTCTAGGTGGAA+AGG 0.566226 tig0029172:+13984 Msa1440980:CDS
GTGATATGATATTACAAGCA+TGG 0.569030 tig0029172:-19702 None:intergenic
GATGGAGACTGGTATGAGAC+GGG 0.571471 tig0029172:+14310 Msa1440980:CDS
TAACCCAAACCAGTCTATGT+TGG 0.572520 tig0029172:+18556 Msa1440980:CDS
TTAACAGTATCATCAAGCTC+AGG 0.581575 tig0029172:-13030 None:intergenic
GGAATAATGAGATGCTGACC+TGG 0.581967 tig0029172:+15864 Msa1440980:CDS
AAGATGGACTTCACCGCCCA+AGG 0.583196 tig0029172:-17133 None:intergenic
TGAACTTACAGAATATATGT+AGG 0.585494 tig0029172:-14333 None:intergenic
GTATCATCAAGCTCAGGACG+TGG 0.587099 tig0029172:-13024 None:intergenic
AGAGTAATGGCAATTGATGA+TGG 0.589606 tig0029172:-12722 None:intergenic
TTTGGCAAGTTCAGACATTG+TGG 0.590839 tig0029172:-18639 None:intergenic
TTCAAAGGTTTAGTAGGACG+AGG 0.591339 tig0029172:-13096 None:intergenic
AGGACGAGGAGAAGCACGAA+AGG 0.592066 tig0029172:-13082 None:intergenic
TCATTTAAGATGTGTTGGGG+TGG 0.598126 tig0029172:-12637 None:intergenic
GTATTAATGATCGGTTACAA+TGG 0.600999 tig0029172:+15000 Msa1440980:CDS
CTTACAAGTTACTGACATGT+CGG 0.601594 tig0029172:-18234 None:intergenic
TAATGGGAAGGTGATTGAAG+GGG 0.601605 tig0029172:+17218 Msa1440980:CDS
TCTTCCTGAGAACTGGAAAG+GGG 0.602104 tig0029172:+17381 Msa1440980:CDS
ATTCTTCAATAGGAGAAGCA+TGG 0.604122 tig0029172:+17039 Msa1440980:intron
GCGTATGTTGAGGCTCAAGA+TGG 0.605964 tig0029172:+15941 Msa1440980:CDS
AGATGGAGACTGGTATGAGA+CGG 0.606492 tig0029172:+14309 Msa1440980:CDS
AAGAAAACCTGCTAAAGAGA+AGG 0.606943 tig0029172:-17975 None:intergenic
TCTATAGGAGATCTTTGTAA+GGG 0.608471 tig0029172:-18893 None:intergenic
TACCATTTAACGGAGATGGA+AGG 0.609350 tig0029172:-15094 None:intergenic
GGCATACAAAGTCTTTCAGG+GGG 0.615499 tig0029172:-17090 None:intergenic
GATCATATTAAGTCCTTGGG+CGG 0.620960 tig0029172:+17120 Msa1440980:CDS
ACCACGTTGTTAAAACACCA+AGG 0.621505 tig0029172:+18714 Msa1440980:CDS
GTCGGCATATACACTTAGAA+GGG 0.623948 tig0029172:-18216 None:intergenic
TATCAACTTTGAGGACTTGG+GGG 0.628380 tig0029172:+19517 Msa1440980:three_prime_UTR
GCTGCATGGAAAGATGAAGA+TGG 0.631551 tig0029172:+14292 Msa1440980:CDS
TGTAACAGGTTAAGGAACCA+TGG 0.633408 tig0029172:+12970 Msa1440980:CDS
ATTGCATTGAAAGTTCATCA+GGG 0.637076 tig0029172:-16796 None:intergenic
TCGGAGCTACTTGCTGCTCG+GGG 0.645359 tig0029172:+19413 Msa1440980:CDS
AGTGTTCATAGCAATGTCAA+AGG 0.649142 tig0029172:+16757 Msa1440980:CDS
TGGCATACAAAGTCTTTCAG+GGG 0.649367 tig0029172:-17091 None:intergenic
GTAATGGCAATTGATGATGG+TGG 0.656444 tig0029172:-12719 None:intergenic
GGTCTGCAGAAATTTCATCA+GGG 0.663327 tig0029172:-18667 None:intergenic
TGGTGGACAGGCGTATGTTG+AGG 0.664600 tig0029172:+15931 Msa1440980:CDS
TCGGCATATACACTTAGAAG+GGG 0.674282 tig0029172:-18215 None:intergenic
TCTTAAATGAACCTATAGAG+TGG 0.675070 tig0029172:+12650 Msa1440980:five_prime_UTR
TCACAAGCCTATATTGCTGG+AGG 0.676636 tig0029172:+13960 Msa1440980:CDS
AATGAACCTATAGAGTGGCG+TGG 0.677490 tig0029172:+12655 Msa1440980:five_prime_UTR
GATCTTTGTAAGGGACGACA+CGG 0.692042 tig0029172:-18884 None:intergenic
GAGGCAAGAGATGTTCTAGG+TGG 0.699892 tig0029172:+13979 Msa1440980:CDS
GAACCTATAGAGTGGCGTGG+TGG 0.702802 tig0029172:+12658 Msa1440980:five_prime_UTR
CAACCTTCAAAGGAGAACCA+TGG 0.712166 tig0029172:-12987 None:intergenic
GCATACAAAGTCTTTCAGGG+GGG 0.727840 tig0029172:-17089 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATAATTTCAAATGAAA+AGG + tig0029172:13783-13802 Msa1440980:intron 10.0%
!!! AGTTATACTAAAATTTTAAA+TGG - tig0029172:15477-15496 None:intergenic 10.0%
!!! ATTTGAATTTTAATGATAAA+AGG - tig0029172:16225-16244 None:intergenic 10.0%
!! CAAAATATTTAACAAAAAAT+TGG - tig0029172:17519-17538 None:intergenic 10.0%
!!! CAATTTTTTGTTAAATATTT+TGG + tig0029172:17517-17536 Msa1440980:intron 10.0%
!!! TTCCATATTTTTTTCTTTAT+CGG - tig0029172:13740-13759 None:intergenic 15.0%
!! CTTGAATTATTAAATTACTT+AGG - tig0029172:14123-14142 None:intergenic 15.0%
!!! TGTTTTAAGAATTAATTTTC+CGG + tig0029172:14148-14167 Msa1440980:intron 15.0%
!! ATTCTAAATAAATGATTTAC+TGG + tig0029172:14842-14861 Msa1440980:intron 15.0%
!!! ATTCAAAAACAAATTTTATC+AGG - tig0029172:15376-15395 None:intergenic 15.0%
!! ATTGTTTATTCCATATTATA+GGG + tig0029172:16710-16729 Msa1440980:intron 15.0%
!! ATATTATTGAATTCTTCAAT+AGG + tig0029172:17029-17048 Msa1440980:intron 15.0%
!! ATTACTTTACAAATTGAAAT+AGG - tig0029172:17740-17759 None:intergenic 15.0%
!!! TTATTTCAGTTTTTTGTTAT+TGG + tig0029172:18434-18453 Msa1440980:intron 15.0%
!! GCATAAATTTAAAAGAAAAA+GGG - tig0029172:19759-19778 None:intergenic 15.0%
!! TGCATAAATTTAAAAGAAAA+AGG - tig0029172:19760-19779 None:intergenic 15.0%
!! AATGAAATTGAAAAGAGTAA+TGG - tig0029172:12738-12757 None:intergenic 20.0%
!! TCAAAAATTCATCTTTCAAA+TGG + tig0029172:12765-12784 Msa1440980:exon 20.0%
!! TATCATCACCAAATTTAAAT+TGG + tig0029172:12803-12822 Msa1440980:CDS 20.0%
!! CAAATTTAAATTGGCAAATT+GGG + tig0029172:12812-12831 Msa1440980:CDS 20.0%
!! TTTGATACAAAAAACAAGAT+GGG - tig0029172:13152-13171 None:intergenic 20.0%
!!! TTTTGATACAAAAAACAAGA+TGG - tig0029172:13153-13172 None:intergenic 20.0%
!!! ATTTGTTGTTTTTGTTCTAT+TGG + tig0029172:13191-13210 Msa1440980:intron 20.0%
!!! TTTGTTGTTTTTGTTCTATT+GGG + tig0029172:13192-13211 Msa1440980:intron 20.0%
!! AAATAGTCAACATGATATTA+TGG - tig0029172:13811-13830 None:intergenic 20.0%
!! ACAAATGAGATTAAATTAGT+CGG - tig0029172:14014-14033 None:intergenic 20.0%
!!! TCTGAAATTTAGTTCTTAAT+TGG - tig0029172:14668-14687 None:intergenic 20.0%
!! ATGCTAGTATTTAATCAATA+TGG + tig0029172:14871-14890 Msa1440980:intron 20.0%
!! TATACTACATTTATAGTATG+TGG + tig0029172:15257-15276 Msa1440980:intron 20.0%
!! TTTAGTGTAAATGAAGAAAA+AGG + tig0029172:15432-15451 Msa1440980:intron 20.0%
!! ATCAATAGATTTATATTCCT+TGG + tig0029172:16033-16052 Msa1440980:intron 20.0%
!! AGCATGAAAATAAAGTAATA+TGG - tig0029172:16264-16283 None:intergenic 20.0%
!! TAAATTATGCACTAAAATTC+TGG + tig0029172:16331-16350 Msa1440980:intron 20.0%
!!! AGAATAAATTTTATCAACCT+TGG + tig0029172:16586-16605 Msa1440980:intron 20.0%
!!! GAATAAATTTTATCAACCTT+GGG + tig0029172:16587-16606 Msa1440980:intron 20.0%
!! CATTGTTTATTCCATATTAT+AGG + tig0029172:16709-16728 Msa1440980:intron 20.0%
!! CAAATGTAATATGAATGAAA+AGG - tig0029172:16914-16933 None:intergenic 20.0%
!!! AAAAGCTTTTTACTAACTAA+TGG + tig0029172:17201-17220 Msa1440980:CDS 20.0%
!!! AAAGCTTTTTACTAACTAAT+GGG + tig0029172:17202-17221 Msa1440980:CDS 20.0%
!! GCTATTAATTAATTGTTCAT+TGG + tig0029172:17286-17305 Msa1440980:intron 20.0%
!! AAAATTTGAATAGAAATCTG+CGG + tig0029172:17591-17610 Msa1440980:intron 20.0%
!! TATTTACATATCAAATTTGC+AGG + tig0029172:17920-17939 Msa1440980:intron 20.0%
!! TGATTTAACACAAACATATA+CGG - tig0029172:18356-18375 None:intergenic 20.0%
!!! AAAAACTGAAATAATTTGTG+TGG - tig0029172:18428-18447 None:intergenic 20.0%
!!! ACAAAAATATTTAGCTTCTA+TGG + tig0029172:18946-18965 Msa1440980:CDS 20.0%
!! AAATTCAGTTTGTAAGATAA+GGG - tig0029172:19173-19192 None:intergenic 20.0%
! CCAATTTGCCAATTTAAATT+TGG - tig0029172:12814-12833 None:intergenic 25.0%
! CCAAATTTAAATTGGCAAAT+TGG + tig0029172:12811-12830 Msa1440980:CDS 25.0%
!!! GTTGATTTTGATATGGTTTT+TGG - tig0029172:12838-12857 None:intergenic 25.0%
! AAACAGCTTATACATAAGAA+AGG - tig0029172:13531-13550 None:intergenic 25.0%
! TAATAAATTGTGTGACTGTT+GGG - tig0029172:13635-13654 None:intergenic 25.0%
! ATAATAAATTGTGTGACTGT+TGG - tig0029172:13636-13655 None:intergenic 25.0%
! TGCCGATAAAGAAAAAAATA+TGG + tig0029172:13735-13754 Msa1440980:intron 25.0%
! AATCCAAAAGAAAAAGAAAG+AGG - tig0029172:13873-13892 None:intergenic 25.0%
!!! TTTGATTTTCAAATTATCCC+AGG + tig0029172:13895-13914 Msa1440980:intron 25.0%
! TTAAATTACTTAGGAACAGT+CGG - tig0029172:14114-14133 None:intergenic 25.0%
! TGAACTTACAGAATATATGT+AGG - tig0029172:14336-14355 None:intergenic 25.0%
!!! TTTTTTATCTCTCTTAGCAA+TGG - tig0029172:14430-14449 None:intergenic 25.0%
! AGAGATAAAAAAAGTGAAAC+TGG + tig0029172:14438-14457 Msa1440980:intron 25.0%
! AGAACTAAATTTCAGAAAGA+AGG + tig0029172:14672-14691 Msa1440980:intron 25.0%
! TCTTACAACTTACCATTTAA+CGG - tig0029172:15107-15126 None:intergenic 25.0%
! TTAAAGAAACTTTCAACTTC+AGG - tig0029172:15163-15182 None:intergenic 25.0%
!!! AAAATAGAAGGTATTTCATG+TGG - tig0029172:15187-15206 None:intergenic 25.0%
! GTACGTGTTTAAAAAATAGA+AGG - tig0029172:15199-15218 None:intergenic 25.0%
!!! TCTATTTTTTAAACACGTAC+AGG + tig0029172:15199-15218 Msa1440980:intron 25.0%
! AGTATAACTAAATTGCTCTA+TGG + tig0029172:15514-15533 Msa1440980:intron 25.0%
! TGAAACAAGATGTGATAAAT+TGG + tig0029172:15602-15621 Msa1440980:intron 25.0%
! ATGTGAAATGAAAACACAAA+TGG + tig0029172:15634-15653 Msa1440980:intron 25.0%
! TGTGAAATGAAAACACAAAT+GGG + tig0029172:15635-15654 Msa1440980:intron 25.0%
!! TTTTTCTTTCTTCACTAATC+TGG + tig0029172:15719-15738 Msa1440980:intron 25.0%
! CATTAAGTAAGAAAATACGT+TGG - tig0029172:15784-15803 None:intergenic 25.0%
!!! ATTGCAAATTTGATTTTCTC+TGG - tig0029172:15890-15909 None:intergenic 25.0%
! GAGAAAATCAAATTTGCAAT+TGG + tig0029172:15890-15909 Msa1440980:CDS 25.0%
! AAATCTTGTCAGTTTGTAAA+TGG + tig0029172:16108-16127 Msa1440980:intron 25.0%
!! TCCTAATAATTTTCACTGAT+GGG + tig0029172:16510-16529 Msa1440980:intron 25.0%
! AACATATTGCAATCTTCTAA+TGG + tig0029172:16623-16642 Msa1440980:intron 25.0%
! TGTTAAACAAACACTTATGT+AGG - tig0029172:16888-16907 None:intergenic 25.0%
! ACATAAGTGTTTGTTTAACA+AGG + tig0029172:16888-16907 Msa1440980:intron 25.0%
! GACTTAATATGATCAACAAT+TGG - tig0029172:17114-17133 None:intergenic 25.0%
!! TTTTAATGCGTGAATTAAGA+TGG - tig0029172:17152-17171 None:intergenic 25.0%
! TGAACAATTAATTAATAGCG+TGG - tig0029172:17285-17304 None:intergenic 25.0%
! TAATTGTTCATTGGAATTCT+TGG + tig0029172:17295-17314 Msa1440980:intron 25.0%
!! TTTCGTTGTTATTCTGAATT+TGG - tig0029172:17839-17858 None:intergenic 25.0%
!!! TTCTTTTTTGTTGTGTGAAA+TGG + tig0029172:18092-18111 Msa1440980:intron 25.0%
!!! TATAATTCAAAAGTGCTATC+CGG - tig0029172:18139-18158 None:intergenic 25.0%
! GATTTAACACAAACATATAC+GGG - tig0029172:18355-18374 None:intergenic 25.0%
! TCTGCATTTAACTATTTGTT+TGG + tig0029172:18470-18489 Msa1440980:intron 25.0%
!! TGTGTTTCACTATCTTATTT+AGG + tig0029172:18526-18545 Msa1440980:intron 25.0%
! CTAAACATATACTGAACTTA+TGG + tig0029172:18780-18799 Msa1440980:intron 25.0%
!! AAATATTTAGCTTCTATGGA+AGG + tig0029172:18950-18969 Msa1440980:CDS 25.0%
! GAAATTCAGTTTGTAAGATA+AGG - tig0029172:19174-19193 None:intergenic 25.0%
! TTCAACCAAATCAATTACTT+TGG - tig0029172:19247-19266 None:intergenic 25.0%
!!! AAGTAATTGATTTGGTTGAA+TGG + tig0029172:19247-19266 Msa1440980:intron 25.0%
! ACAAGATTTGAAGAAAATTC+TGG + tig0029172:19475-19494 Msa1440980:three_prime_UTR 25.0%
! CAAGATTTGAAGAAAATTCT+GGG + tig0029172:19476-19495 Msa1440980:three_prime_UTR 25.0%
! AATTGATAAAGTGACTCAAA+TGG - tig0029172:19563-19582 None:intergenic 25.0%
!!! GTTCATGATTATTTTTAGTG+TGG + tig0029172:19641-19660 Msa1440980:three_prime_UTR 25.0%
! ATGGCTACAAAGAAAATAAA+GGG - tig0029172:19686-19705 None:intergenic 25.0%
! AGGTTCATTTAAGATGTGTT+GGG - tig0029172:12644-12663 None:intergenic 30.0%
! TAGGTTCATTTAAGATGTGT+TGG - tig0029172:12645-12664 None:intergenic 30.0%
TCTTAAATGAACCTATAGAG+TGG + tig0029172:12650-12669 Msa1440980:five_prime_UTR 30.0%
! ATCTTTCAAATGGCTCTATA+TGG + tig0029172:12775-12794 Msa1440980:exon 30.0%
!! AGAAGAGGTTGATTTTGATA+TGG - tig0029172:12845-12864 None:intergenic 30.0%
ATATGAGTTCATAGAAGAAG+AGG - tig0029172:12860-12879 None:intergenic 30.0%
!! ATTTTCTAGTAGCGTTTCAA+TGG + tig0029172:12897-12916 Msa1440980:CDS 30.0%
!! TTTTCTAGTAGCGTTTCAAT+GGG + tig0029172:12898-12917 Msa1440980:CDS 30.0%
! AATTGAGTCTTGTCTTCTAA+TGG + tig0029172:13254-13273 Msa1440980:intron 30.0%
GTTGATTGTAATCACATATG+TGG + tig0029172:13357-13376 Msa1440980:intron 30.0%
ATGTGTTCTTTATGCATGAA+AGG + tig0029172:13494-13513 Msa1440980:intron 30.0%
!! AAACTATCGAAGAGTGTTTA+TGG + tig0029172:13555-13574 Msa1440980:intron 30.0%
!!! ATTTTTTTCTTTATCGGCAC+AGG - tig0029172:13734-13753 None:intergenic 30.0%
AATGGAAAAAGGTTTACTGA+AGG - tig0029172:14412-14431 None:intergenic 30.0%
GATAAAAAAAGTGAAACTGG+AGG + tig0029172:14441-14460 Msa1440980:intron 30.0%
! AAAATCCCAATGATGGAAAA+AGG - tig0029172:14624-14643 None:intergenic 30.0%
TAAATTTCAGAAAGAAGGCA+TGG + tig0029172:14677-14696 Msa1440980:intron 30.0%
! AAATTTCAGAAAGAAGGCAT+GGG + tig0029172:14678-14697 Msa1440980:intron 30.0%
! TCAAAAGACTTTTGCATGAA+TGG + tig0029172:14730-14749 Msa1440980:intron 30.0%
! CAAAAGACTTTTGCATGAAT+GGG + tig0029172:14731-14750 Msa1440980:intron 30.0%
! TTTTGCATGAATGGGAAATT+TGG + tig0029172:14739-14758 Msa1440980:intron 30.0%
! GTTTTCTTTTTCCCAAAGTT+GGG + tig0029172:14940-14959 Msa1440980:intron 30.0%
! TTTTCTTTTTCCCAAAGTTG+GGG + tig0029172:14941-14960 Msa1440980:intron 30.0%
GTATTAATGATCGGTTACAA+TGG + tig0029172:15000-15019 Msa1440980:CDS 30.0%
! AATTTTTGTGCCTATGTGAT+GGG + tig0029172:15281-15300 Msa1440980:intron 30.0%
TTATTCCTTAATCTGAACTC+GGG - tig0029172:15328-15347 None:intergenic 30.0%
GTTATTCCTTAATCTGAACT+CGG - tig0029172:15329-15348 None:intergenic 30.0%
!!! AATGCATTTTGAAGCTATAG+CGG + tig0029172:15403-15422 Msa1440980:intron 30.0%
GTGAAATGAAAACACAAATG+GGG + tig0029172:15636-15655 Msa1440980:intron 30.0%
AATGTCAAAACCAGGAATAT+GGG + tig0029172:15832-15851 Msa1440980:intron 30.0%
! ATGGTATTTCTGTCAAAGAA+TGG + tig0029172:15960-15979 Msa1440980:CDS 30.0%
!!! ATTCTGAGATGAGTTGTTTT+AGG + tig0029172:16165-16184 Msa1440980:intron 30.0%
ATTTAATATTCTCCCACACT+TGG - tig0029172:16439-16458 None:intergenic 30.0%
GTGAAAATTATTAGGACAGA+CGG - tig0029172:16506-16525 None:intergenic 30.0%
! GTCCTAATAATTTTCACTGA+TGG + tig0029172:16509-16528 Msa1440980:intron 30.0%
TCCCATCAGTGAAAATTATT+AGG - tig0029172:16514-16533 None:intergenic 30.0%
TAGAAGATTGCAATATGTTC+AGG - tig0029172:16622-16641 None:intergenic 30.0%
TCTACTTATTGCAAATAGTC+TGG + tig0029172:16646-16665 Msa1440980:intron 30.0%
CTACTTATTGCAAATAGTCT+GGG + tig0029172:16647-16666 Msa1440980:intron 30.0%
ATTGCATTGAAAGTTCATCA+GGG - tig0029172:16799-16818 None:intergenic 30.0%
TGTTGATCATATTAAGTCCT+TGG + tig0029172:17116-17135 Msa1440980:CDS 30.0%
GTTGATCATATTAAGTCCTT+GGG + tig0029172:17117-17136 Msa1440980:CDS 30.0%
! CTTTTTACTAACTAATGGGA+AGG + tig0029172:17206-17225 Msa1440980:CDS 30.0%
! TCCATTTCTTCACAATTTTG+AGG + tig0029172:17320-17339 Msa1440980:intron 30.0%
TCCTCAAAATTGTGAAGAAA+TGG - tig0029172:17324-17343 None:intergenic 30.0%
!! CAGAATATCCACTGTTTTAA+GGG - tig0029172:17353-17372 None:intergenic 30.0%
! TCAGAATATCCACTGTTTTA+AGG - tig0029172:17354-17373 None:intergenic 30.0%
CATATGTGAACATTTATGAC+TGG - tig0029172:17445-17464 None:intergenic 30.0%
CAGTCATAAATGTTCACATA+TGG + tig0029172:17443-17462 Msa1440980:CDS 30.0%
TGTTCACATATGGTAAGTAA+TGG + tig0029172:17453-17472 Msa1440980:intron 30.0%
GAGTTATATTATCCTTTGAC+TGG + tig0029172:17655-17674 Msa1440980:intron 30.0%
AAACTATTACAACCAGTCAA+AGG - tig0029172:17670-17689 None:intergenic 30.0%
!! TTGACTGGTTGTAATAGTTT+TGG + tig0029172:17670-17689 Msa1440980:intron 30.0%
AAGTATATTACTGCTTCAGT+TGG - tig0029172:17771-17790 None:intergenic 30.0%
GTTTGTAATATTTGTCAGTG+AGG + tig0029172:17862-17881 Msa1440980:intron 30.0%
TAAATAGAATGTCAGCATAC+TGG - tig0029172:17906-17925 None:intergenic 30.0%
TAACAAATACATTTGAGTGG+CGG - tig0029172:18267-18286 None:intergenic 30.0%
TGCTAACAAATACATTTGAG+TGG - tig0029172:18270-18289 None:intergenic 30.0%
! TGATGATTTTTGCTTTGCTT+TGG - tig0029172:18691-18710 None:intergenic 30.0%
AAGAAATAATCCAACTCAGT+GGG - tig0029172:18747-18766 None:intergenic 30.0%
AAAGAAATAATCCAACTCAG+TGG - tig0029172:18748-18767 None:intergenic 30.0%
TCTATAGGAGATCTTTGTAA+GGG - tig0029172:18896-18915 None:intergenic 30.0%
TTCTATAGGAGATCTTTGTA+AGG - tig0029172:18897-18916 None:intergenic 30.0%
TTACAAAGATCTCCTATAGA+AGG + tig0029172:18896-18915 Msa1440980:CDS 30.0%
GCTAAATAGAAACCTTCTAT+AGG - tig0029172:18911-18930 None:intergenic 30.0%
ATAGAAGGTTTCTATTTAGC+TGG + tig0029172:18911-18930 Msa1440980:CDS 30.0%
! ATTCAGGTTAGGTCAATATT+CGG - tig0029172:19131-19150 None:intergenic 30.0%
! TTATATCCACTATTCAGGTT+AGG - tig0029172:19142-19161 None:intergenic 30.0%
TCTTACAAACTGAATTTCTG+AGG + tig0029172:19176-19195 Msa1440980:intron 30.0%
CATATAAGTAGATCATGAAG+CGG - tig0029172:19213-19232 None:intergenic 30.0%
GAACTCCAAAGTAATTGATT+TGG + tig0029172:19239-19258 Msa1440980:intron 30.0%
! CTTGATAGCTAAAACTTTCA+TGG - tig0029172:19302-19321 None:intergenic 30.0%
TTATCAATTCATACGAAGAC+AGG + tig0029172:19574-19593 Msa1440980:three_prime_UTR 30.0%
! CTTTTCCCTAAATATTTGTC+GGG - tig0029172:19602-19621 None:intergenic 30.0%
! CCTTTTCCCTAAATATTTGT+CGG - tig0029172:19603-19622 None:intergenic 30.0%
CATGGCTACAAAGAAAATAA+AGG - tig0029172:19687-19706 None:intergenic 30.0%
GTGATATGATATTACAAGCA+TGG - tig0029172:19705-19724 None:intergenic 30.0%
! GGTTCATTTAAGATGTGTTG+GGG - tig0029172:12643-12662 None:intergenic 35.0%
! AAGAAATGAAGACTAGTTGG+TGG - tig0029172:12689-12708 None:intergenic 35.0%
GAGAAGAAATGAAGACTAGT+TGG - tig0029172:12692-12711 None:intergenic 35.0%
AGAGTAATGGCAATTGATGA+TGG - tig0029172:12725-12744 None:intergenic 35.0%
! TTTCAATGGGTCTTAACTTG+AGG + tig0029172:12911-12930 Msa1440980:CDS 35.0%
TCAATGCAAACAACCTTCAA+AGG - tig0029172:13000-13019 None:intergenic 35.0%
TTAACAGTATCATCAAGCTC+AGG - tig0029172:13033-13052 None:intergenic 35.0%
ACAACCTTCAAAGGTTTAGT+AGG - tig0029172:13105-13124 None:intergenic 35.0%
ATAAAGCCTTCACTCATTGT+TGG - tig0029172:13696-13715 None:intergenic 35.0%
! TGGCCTCTTTCTTTTTCTTT+TGG + tig0029172:13867-13886 Msa1440980:intron 35.0%
! TTTTCAAATTATCCCAGGAC+TGG + tig0029172:13900-13919 Msa1440980:intron 35.0%
! CTTGTCAACTGCAAAGTATT+TGG + tig0029172:13927-13946 Msa1440980:CDS 35.0%
! ATCTTCGATTTTGCTCTTCT+TGG + tig0029172:14039-14058 Msa1440980:intron 35.0%
! GAATTAATTTTCCGGCTCTT+TGG + tig0029172:14156-14175 Msa1440980:intron 35.0%
TCTCTCTTAGCAATGGAAAA+AGG - tig0029172:14423-14442 None:intergenic 35.0%
TCTATACTTTCTTTCTCCTG+TGG - tig0029172:14498-14517 None:intergenic 35.0%
ACTAGTAGAAGGTCAAAGAA+TGG - tig0029172:14547-14566 None:intergenic 35.0%
! CAATGCCTTTTTCCATCATT+GGG + tig0029172:14616-14635 Msa1440980:intron 35.0%
AAGGATCAAAATCCCAATGA+TGG - tig0029172:14631-14650 None:intergenic 35.0%
!!! AGTCTTTTGAGATTGAAGCT+TGG - tig0029172:14720-14739 None:intergenic 35.0%
TAGTACAATACATGTGCCAA+GGG - tig0029172:14797-14816 None:intergenic 35.0%
ATAGTACAATACATGTGCCA+AGG - tig0029172:14798-14817 None:intergenic 35.0%
! CGTTTTCTTTTTCCCAAAGT+TGG + tig0029172:14939-14958 Msa1440980:intron 35.0%
CAAATAGGTTCTGCACATTA+GGG - tig0029172:14971-14990 None:intergenic 35.0%
TAATACCGAGTTCTCCAAAT+AGG - tig0029172:14986-15005 None:intergenic 35.0%
GAGAACTCGGTATTAATGAT+CGG + tig0029172:14991-15010 Msa1440980:CDS 35.0%
TAATGATCGGTTACAATGGA+AGG + tig0029172:15004-15023 Msa1440980:CDS 35.0%
AACTTACCATTTAACGGAGA+TGG - tig0029172:15101-15120 None:intergenic 35.0%
GTTGTAAGACTTTACGTATG+TGG + tig0029172:15118-15137 Msa1440980:intron 35.0%
! CAATTTTTGTGCCTATGTGA+TGG + tig0029172:15280-15299 Msa1440980:intron 35.0%
AAAAACCCGAGTTCAGATTA+AGG + tig0029172:15320-15339 Msa1440980:intron 35.0%
TCAGATTAAGGAATAACCCT+TGG + tig0029172:15332-15351 Msa1440980:intron 35.0%
TGCTGTGTTAAAACTTCCAA+GGG - tig0029172:15351-15370 None:intergenic 35.0%
ATGCTGTGTTAAAACTTCCA+AGG - tig0029172:15352-15371 None:intergenic 35.0%
AAAACACAAATGGGGATCAA+GGG + tig0029172:15644-15663 Msa1440980:intron 35.0%
GAATGTCAAAACCAGGAATA+TGG + tig0029172:15831-15850 Msa1440980:intron 35.0%
!! AAATTTGATTTTCTCTGGCC+AGG - tig0029172:15885-15904 None:intergenic 35.0%
CAAAGAATGGATGAGAAAAC+AGG + tig0029172:15973-15992 Msa1440980:CDS 35.0%
AATGGATGAGAAAACAGGTA+TGG + tig0029172:15978-15997 Msa1440980:intron 35.0%
TTGTCTTGATTCCATAACTG+TGG + tig0029172:16004-16023 Msa1440980:intron 35.0%
!!! TGAAATTTTCAAGTCACGAC+AGG - tig0029172:16083-16102 None:intergenic 35.0%
TCTTGTCAGTTTGTAAATGG+AGG + tig0029172:16111-16130 Msa1440980:intron 35.0%
CTTGTCAGTTTGTAAATGGA+GGG + tig0029172:16112-16131 Msa1440980:intron 35.0%
TTGTCAGTTTGTAAATGGAG+GGG + tig0029172:16113-16132 Msa1440980:intron 35.0%
!!! TGAGATGAGTTGTTTTAGGA+TGG + tig0029172:16169-16188 Msa1440980:intron 35.0%
CACTGATGGGAAATAAAGAA+AGG + tig0029172:16523-16542 Msa1440980:intron 35.0%
TTCAGGAATGCCCTATAATA+TGG - tig0029172:16723-16742 None:intergenic 35.0%
AGTGTTCATAGCAATGTCAA+AGG + tig0029172:16757-16776 Msa1440980:CDS 35.0%
!! ATCAGGGTTGATGAAGTTTA+GGG - tig0029172:16783-16802 None:intergenic 35.0%
CATTGCATTGAAAGTTCATC+AGG - tig0029172:16800-16819 None:intergenic 35.0%
! TGCTTTAAACCGATTTCTTC+AGG + tig0029172:16829-16848 Msa1440980:CDS 35.0%
ATCCAGTGTTTGTGAAACAT+AGG + tig0029172:16972-16991 Msa1440980:intron 35.0%
ATCCTATGTTTCACAAACAC+TGG - tig0029172:16977-16996 None:intergenic 35.0%
ATTCTTCAATAGGAGAAGCA+TGG + tig0029172:17039-17058 Msa1440980:intron 35.0%
TTGGCATACAAAGTCTTTCA+GGG - tig0029172:17095-17114 None:intergenic 35.0%
ATTGGCATACAAAGTCTTTC+AGG - tig0029172:17096-17115 None:intergenic 35.0%
! GGAAGTCTTATAAACATACC+TGG - tig0029172:17264-17283 None:intergenic 35.0%
!!! AATATCCACTGTTTTAAGGG+AGG - tig0029172:17350-17369 None:intergenic 35.0%
! TTCTCCAATCTCTGGAAATA+AGG - tig0029172:17409-17428 None:intergenic 35.0%
CAACTAATTTCTCCAATCTC+TGG - tig0029172:17417-17436 None:intergenic 35.0%
CAGAGATTGGAGAAATTAGT+TGG + tig0029172:17415-17434 Msa1440980:CDS 35.0%
TATATTACTGCTTCAGTTGG+TGG - tig0029172:17768-17787 None:intergenic 35.0%
AAGAAAACCTGCTAAAGAGA+AGG - tig0029172:17978-17997 None:intergenic 35.0%
! CTCTATCTTTTATCCCTTCT+AGG - tig0029172:18024-18043 None:intergenic 35.0%
CTAGAAGGGATAAAAGATAG+AGG + tig0029172:18022-18041 Msa1440980:intron 35.0%
CTTACAAGTTACTGACATGT+CGG - tig0029172:18237-18256 None:intergenic 35.0%
ACTACGTGAAATCCATTCTT+CGG - tig0029172:18600-18619 None:intergenic 35.0%
CGTAGTGACGAAGATATTAT+CGG + tig0029172:18614-18633 Msa1440980:CDS 35.0%
AATTTCATCAGGGAAGAGTT+TGG - tig0029172:18660-18679 None:intergenic 35.0%
ACAATGTAGTCGGTTACATT+AGG - tig0029172:18828-18847 None:intergenic 35.0%
TATTGACCTAACCTGAATAG+TGG + tig0029172:19133-19152 Msa1440980:intron 35.0%
!! ACCTGAATAGTGGATATAAG+TGG + tig0029172:19143-19162 Msa1440980:intron 35.0%
TCCACTTATATCCACTATTC+AGG - tig0029172:19147-19166 None:intergenic 35.0%
CGCTTCATGATCTACTTATA+TGG + tig0029172:19211-19230 Msa1440980:intron 35.0%
ATGGACTTTCATATCAACTC+AGG + tig0029172:19266-19285 Msa1440980:intron 35.0%
TGTCTTTAATACGCAGGATT+CGG + tig0029172:19394-19413 Msa1440980:intron 35.0%
! TCATATCAACTTTGAGGACT+TGG + tig0029172:19514-19533 Msa1440980:three_prime_UTR 35.0%
! CATATCAACTTTGAGGACTT+GGG + tig0029172:19515-19534 Msa1440980:three_prime_UTR 35.0%
! ATATCAACTTTGAGGACTTG+GGG + tig0029172:19516-19535 Msa1440980:three_prime_UTR 35.0%
AGGTTCCCGACAAATATTTA+GGG + tig0029172:19594-19613 Msa1440980:three_prime_UTR 35.0%
CCGACAAATATTTAGGGAAA+AGG + tig0029172:19600-19619 Msa1440980:three_prime_UTR 35.0%
! TCATTTAAGATGTGTTGGGG+TGG - tig0029172:12640-12659 None:intergenic 40.0%
!! GTAATGGCAATTGATGATGG+TGG - tig0029172:12722-12741 None:intergenic 40.0%
CTGCTAAGTGTAACAGGTTA+AGG + tig0029172:12962-12981 Msa1440980:CDS 40.0%
TGTAACAGGTTAAGGAACCA+TGG + tig0029172:12970-12989 Msa1440980:CDS 40.0%
TTCAAAGGTTTAGTAGGACG+AGG - tig0029172:13099-13118 None:intergenic 40.0%
TCGTCCTACTAAACCTTTGA+AGG + tig0029172:13098-13117 Msa1440980:CDS 40.0%
CCAGCAATAACAACCTTCAA+AGG - tig0029172:13114-13133 None:intergenic 40.0%
! CCTTTGAAGGTTGTTATTGC+TGG + tig0029172:13111-13130 Msa1440980:CDS 40.0%
! TGAGTCTTGTCTTCTAATGG+TGG + tig0029172:13257-13276 Msa1440980:intron 40.0%
!! TTCTCATCAAAAGGAGTACC+TGG - tig0029172:13420-13439 None:intergenic 40.0%
CACTGACACTTCTCATCAAA+AGG - tig0029172:13429-13448 None:intergenic 40.0%
!! AGAAGTGTCAGTGCTACAAA+GGG + tig0029172:13436-13455 Msa1440980:intron 40.0%
!! GAATGGGATAGGGTTGTTTT+AGG + tig0029172:13468-13487 Msa1440980:intron 40.0%
GTCAATCCAACAATGAGTGA+AGG + tig0029172:13687-13706 Msa1440980:intron 40.0%
TAATACTTGTGTGCGAGCTT+TGG + tig0029172:13847-13866 Msa1440980:intron 40.0%
! AAGAGATGTTCTAGGTGGAA+AGG + tig0029172:13984-14003 Msa1440980:CDS 40.0%
!!! CGTTTTCTAAGATTGCTGCA+TGG + tig0029172:14278-14297 Msa1440980:intron 40.0%
CTTCTACTAGTGTATGCTCT+CGG + tig0029172:14556-14575 Msa1440980:intron 40.0%
!! AAGGCATTGGACTTGATTGT+TGG - tig0029172:14605-14624 None:intergenic 40.0%
! CCAATGATGGAAAAAGGCAT+TGG - tig0029172:14618-14637 None:intergenic 40.0%
! CCAATGCCTTTTTCCATCAT+TGG + tig0029172:14615-14634 Msa1440980:intron 40.0%
CCAAATAGGTTCTGCACATT+AGG - tig0029172:14972-14991 None:intergenic 40.0%
CCTAATGTGCAGAACCTATT+TGG + tig0029172:14969-14988 Msa1440980:CDS 40.0%
CAGAACCTATTTGGAGAACT+CGG + tig0029172:14978-14997 Msa1440980:CDS 40.0%
TCAAATCGACTAAACTCTCC+AGG - tig0029172:15062-15081 None:intergenic 40.0%
TACCATTTAACGGAGATGGA+AGG - tig0029172:15097-15116 None:intergenic 40.0%
! AATCTGAACTCGGGTTTTTG+AGG - tig0029172:15319-15338 None:intergenic 40.0%
GAAAACACAAATGGGGATCA+AGG + tig0029172:15643-15662 Msa1440980:intron 40.0%
! CTTCACTAATCTGGTTTGCA+TGG + tig0029172:15728-15747 Msa1440980:intron 40.0%
ATGCTGTGAATGTCAAAACC+AGG + tig0029172:15824-15843 Msa1440980:intron 40.0%
TTGATGAACTGCCACAGTTA+TGG - tig0029172:16018-16037 None:intergenic 40.0%
TATATCACCAGTCAAGGTCA+TGG + tig0029172:16057-16076 Msa1440980:intron 40.0%
CATTATCGTCATCAAGTCAC+TGG - tig0029172:16199-16218 None:intergenic 40.0%
AGTTTCCTTACTTCCAAGTG+TGG + tig0029172:16423-16442 Msa1440980:intron 40.0%
GTTTCCTTACTTCCAAGTGT+GGG + tig0029172:16424-16443 Msa1440980:intron 40.0%
ATTATTAGGACAGACGGCAT+TGG - tig0029172:16500-16519 None:intergenic 40.0%
ACTTCATCAGTTACACGTTC+AGG - tig0029172:16740-16759 None:intergenic 40.0%
!! CATCAGGGTTGATGAAGTTT+AGG - tig0029172:16784-16803 None:intergenic 40.0%
ATGATCGCACCTGAAGAAAT+CGG - tig0029172:16841-16860 None:intergenic 40.0%
!!! TGGTTCTAAGATGGCCTTTT+TGG + tig0029172:17059-17078 Msa1440980:CDS 40.0%
!! TCTAAGATGGCCTTTTTGGA+CGG + tig0029172:17063-17082 Msa1440980:CDS 40.0%
TGGCATACAAAGTCTTTCAG+GGG - tig0029172:17094-17113 None:intergenic 40.0%
GATCATATTAAGTCCTTGGG+CGG + tig0029172:17120-17139 Msa1440980:CDS 40.0%
ACTAATGGGAAGGTGATTGA+AGG + tig0029172:17216-17235 Msa1440980:CDS 40.0%
CTAATGGGAAGGTGATTGAA+GGG + tig0029172:17217-17236 Msa1440980:CDS 40.0%
TAATGGGAAGGTGATTGAAG+GGG + tig0029172:17218-17237 Msa1440980:CDS 40.0%
GATTTCCTCCCTTAAAACAG+TGG + tig0029172:17342-17361 Msa1440980:intron 40.0%
TTCTTCCTGAGAACTGGAAA+GGG + tig0029172:17380-17399 Msa1440980:CDS 40.0%
! GGTTCCTTATTTCCAGAGAT+TGG + tig0029172:17402-17421 Msa1440980:CDS 40.0%
TGAATAGAAATCTGCGGTTG+TGG + tig0029172:17597-17616 Msa1440980:intron 40.0%
ATAGAATGTCAGCATACTGG+TGG - tig0029172:17903-17922 None:intergenic 40.0%
ATGATCACCTTCTCTTTAGC+AGG + tig0029172:17968-17987 Msa1440980:CDS 40.0%
AAACACTTGTGATGCCTAGA+AGG + tig0029172:18007-18026 Msa1440980:intron 40.0%
AACACTTGTGATGCCTAGAA+GGG + tig0029172:18008-18027 Msa1440980:intron 40.0%
CTCTTTCCTTCTTTGCATTC+CGG + tig0029172:18117-18136 Msa1440980:intron 40.0%
TCGGCATATACACTTAGAAG+GGG - tig0029172:18218-18237 None:intergenic 40.0%
GTCGGCATATACACTTAGAA+GGG - tig0029172:18219-18238 None:intergenic 40.0%
TGTCGGCATATACACTTAGA+AGG - tig0029172:18220-18239 None:intergenic 40.0%
! CGACATGTCAGTAACTTGTA+AGG + tig0029172:18235-18254 Msa1440980:CDS 40.0%
! CAATTTGAGACAGTGCTTTC+TGG + tig0029172:18388-18407 Msa1440980:intron 40.0%
TAACCCAAACCAGTCTATGT+TGG + tig0029172:18556-18575 Msa1440980:CDS 40.0%
TTTGGCAAGTTCAGACATTG+TGG - tig0029172:18642-18661 None:intergenic 40.0%
GGTCTGCAGAAATTTCATCA+GGG - tig0029172:18670-18689 None:intergenic 40.0%
TGGTCTGCAGAAATTTCATC+AGG - tig0029172:18671-18690 None:intergenic 40.0%
ACCACGTTGTTAAAACACCA+AGG + tig0029172:18714-18733 Msa1440980:CDS 40.0%
!!! ACCTTGGTGTTTTAACAACG+TGG - tig0029172:18718-18737 None:intergenic 40.0%
TAGTCGGTTACATTAGGACT+CGG - tig0029172:18822-18841 None:intergenic 40.0%
GTAACCGACTACATTGTTTC+AGG + tig0029172:18831-18850 Msa1440980:intron 40.0%
CTGACCTGAAACAATGTAGT+CGG - tig0029172:18838-18857 None:intergenic 40.0%
GGTTAGGTCAATATTCGGTA+TGG - tig0029172:19126-19145 None:intergenic 40.0%
CATTGCTGTCTTTAATACGC+AGG + tig0029172:19388-19407 Msa1440980:intron 40.0%
! GAAAATTCTGGGAAGAGTAC+AGG + tig0029172:19487-19506 Msa1440980:three_prime_UTR 40.0%
! GGAGCATCATATCAACTTTG+AGG + tig0029172:19508-19527 Msa1440980:three_prime_UTR 40.0%
! TATCAACTTTGAGGACTTGG+GGG + tig0029172:19517-19536 Msa1440980:three_prime_UTR 40.0%
CAGGTTCCCGACAAATATTT+AGG + tig0029172:19593-19612 Msa1440980:three_prime_UTR 40.0%
AGGGCTCACATTTCATGTAT+TGG - tig0029172:19667-19686 None:intergenic 40.0%
AATGAACCTATAGAGTGGCG+TGG + tig0029172:12655-12674 Msa1440980:five_prime_UTR 45.0%
CTCGTTCTGCTAAGTGTAAC+AGG + tig0029172:12956-12975 Msa1440980:CDS 45.0%
GAACCATGGTTCTCCTTTGA+AGG + tig0029172:12984-13003 Msa1440980:CDS 45.0%
CAACCTTCAAAGGAGAACCA+TGG - tig0029172:12990-13009 None:intergenic 45.0%
! AAGGTTGTTATTGCTGGTGC+AGG + tig0029172:13117-13136 Msa1440980:CDS 45.0%
CTTCAGACACGAACACATGT+TGG + tig0029172:13391-13410 Msa1440980:intron 45.0%
!! GAGAAGTGTCAGTGCTACAA+AGG + tig0029172:13435-13454 Msa1440980:intron 45.0%
! GAAGTGTCAGTGCTACAAAG+GGG + tig0029172:13437-13456 Msa1440980:intron 45.0%
AAGTGTCAGTGCTACAAAGG+GGG + tig0029172:13438-13457 Msa1440980:intron 45.0%
ACAAAGGGGGAAAGTGAGAA+TGG + tig0029172:13451-13470 Msa1440980:intron 45.0%
CAAAGGGGGAAAGTGAGAAT+GGG + tig0029172:13452-13471 Msa1440980:intron 45.0%
GGGAAAGTGAGAATGGGATA+GGG + tig0029172:13458-13477 Msa1440980:intron 45.0%
! GCAAAGTATTTGGCAGATGC+TGG + tig0029172:13937-13956 Msa1440980:CDS 45.0%
TGGTCACAAGCCTATATTGC+TGG + tig0029172:13957-13976 Msa1440980:CDS 45.0%
TCACAAGCCTATATTGCTGG+AGG + tig0029172:13960-13979 Msa1440980:CDS 45.0%
TCTCTTGCCTCCAGCAATAT+AGG - tig0029172:13970-13989 None:intergenic 45.0%
AGGAACAGTCGGATAAGAAC+AGG - tig0029172:14103-14122 None:intergenic 45.0%
CAGCATTAACTCCAAAGAGC+CGG - tig0029172:14170-14189 None:intergenic 45.0%
GCTGCATGGAAAGATGAAGA+TGG + tig0029172:14292-14311 Msa1440980:CDS 45.0%
GGAAAGATGAAGATGGAGAC+TGG + tig0029172:14299-14318 Msa1440980:CDS 45.0%
AGATGGAGACTGGTATGAGA+CGG + tig0029172:14309-14328 Msa1440980:CDS 45.0%
! CGAGAGCATACACTAGTAGA+AGG - tig0029172:14558-14577 None:intergenic 45.0%
! GTGTATGCTCTCGGTAGTTT+TGG + tig0029172:14565-14584 Msa1440980:intron 45.0%
ATTGGATGTGTGATGCAGCA+AGG - tig0029172:14650-14669 None:intergenic 45.0%
! ACTGGTCTACAAGCACTGTT+AGG - tig0029172:14771-14790 None:intergenic 45.0%
TTAGGGTAAGCCCCAACTTT+GGG - tig0029172:14954-14973 None:intergenic 45.0%
ATTAGGGTAAGCCCCAACTT+TGG - tig0029172:14955-14974 None:intergenic 45.0%
TAACGGAGATGGAAGGACTT+CGG - tig0029172:15090-15109 None:intergenic 45.0%
GTCCTTCCATCTCCGTTAAA+TGG + tig0029172:15092-15111 Msa1440980:CDS 45.0%
! ACTAATCTGGTTTGCATGGC+TGG + tig0029172:15732-15751 Msa1440980:intron 45.0%
CTCAAGATTGCCCATATTCC+TGG - tig0029172:15845-15864 None:intergenic 45.0%
CAGGAATATGGGCAATCTTG+AGG + tig0029172:15843-15862 Msa1440980:intron 45.0%
GGAATAATGAGATGCTGACC+TGG + tig0029172:15864-15883 Msa1440980:CDS 45.0%
CTTGACTGGTGATATAGCCA+AGG - tig0029172:16053-16072 None:intergenic 45.0%
CTTGGCTATATCACCAGTCA+AGG + tig0029172:16051-16070 Msa1440980:intron 45.0%
TCAGTTTGTAAATGGAGGGG+AGG + tig0029172:16116-16135 Msa1440980:intron 45.0%
TTCTCCCACACTTGGAAGTA+AGG - tig0029172:16431-16450 None:intergenic 45.0%
!! GGAGAAGCATGGTTCTAAGA+TGG + tig0029172:17050-17069 Msa1440980:intron 45.0%
GCATACAAAGTCTTTCAGGG+GGG - tig0029172:17092-17111 None:intergenic 45.0%
GGCATACAAAGTCTTTCAGG+GGG - tig0029172:17093-17112 None:intergenic 45.0%
AGCTTCTTCTTCCTGAGAAC+TGG + tig0029172:17374-17393 Msa1440980:CDS 45.0%
CTTCTTCCTGAGAACTGGAA+AGG + tig0029172:17379-17398 Msa1440980:CDS 45.0%
TCTTCCTGAGAACTGGAAAG+GGG + tig0029172:17381-17400 Msa1440980:CDS 45.0%
GAAATCTGCGGTTGTGGTAT+AGG + tig0029172:17603-17622 Msa1440980:intron 45.0%
CGGAATGCAAAGAAGGAAAG+AGG - tig0029172:18119-18138 None:intergenic 45.0%
TGCTATCCGGAATGCAAAGA+AGG - tig0029172:18126-18145 None:intergenic 45.0%
TTGAGGCTACAACTTTGGCA+TGG - tig0029172:18311-18330 None:intergenic 45.0%
TGCCAAAGTTGTAGCCTCAA+TGG + tig0029172:18311-18330 Msa1440980:intron 45.0%
GACCATTGAGGCTACAACTT+TGG - tig0029172:18316-18335 None:intergenic 45.0%
TTGTAGCCTCAATGGTCTCT+AGG + tig0029172:18319-18338 Msa1440980:intron 45.0%
TGTAGCCTCAATGGTCTCTA+GGG + tig0029172:18320-18339 Msa1440980:intron 45.0%
GCACTGTCTCAAATTGATGC+AGG - tig0029172:18384-18403 None:intergenic 45.0%
CTGAACGTTGCAATGCTGTT+TGG + tig0029172:18499-18518 Msa1440980:intron 45.0%
!! GCTCCAACATAGACTGGTTT+GGG - tig0029172:18562-18581 None:intergenic 45.0%
! AGCTCCAACATAGACTGGTT+TGG - tig0029172:18563-18582 None:intergenic 45.0%
AAACCAGTCTATGTTGGAGC+TGG + tig0029172:18562-18581 Msa1440980:CDS 45.0%
AAACCAGCTCCAACATAGAC+TGG - tig0029172:18568-18587 None:intergenic 45.0%
! TTTTTGCACCAGCCGAAGAA+TGG + tig0029172:18585-18604 Msa1440980:CDS 45.0%
ACTCAGTGGGACTAAAACCT+TGG - tig0029172:18734-18753 None:intergenic 45.0%
!! AGGTTTTAGTCCCACTGAGT+TGG + tig0029172:18734-18753 Msa1440980:intron 45.0%
GATCTTTGTAAGGGACGACA+CGG - tig0029172:18887-18906 None:intergenic 45.0%
!! ATGGAAGGTGCTGTTCTTTC+TGG + tig0029172:18965-18984 Msa1440980:CDS 45.0%
!! TGGAAGGTGCTGTTCTTTCT+GGG + tig0029172:18966-18985 Msa1440980:CDS 45.0%
TTGTGCACAGGCTATTGTAC+AGG + tig0029172:18994-19013 Msa1440980:CDS 45.0%
GTATCATCAAGCTCAGGACG+TGG - tig0029172:13027-13046 None:intergenic 50.0%
CGACACTGACACGTTGACAT+CGG + tig0029172:13310-13329 Msa1440980:intron 50.0%
ACGAACACATGTTGGACACC+AGG + tig0029172:13399-13418 Msa1440980:intron 50.0%
GGGGAAAGTGAGAATGGGAT+AGG + tig0029172:13457-13476 Msa1440980:intron 50.0%
! CAAATTATCCCAGGACTGGC+TGG + tig0029172:13904-13923 Msa1440980:intron 50.0%
CTGGAGGCAAGAGATGTTCT+AGG + tig0029172:13976-13995 Msa1440980:CDS 50.0%
! GAGGCAAGAGATGTTCTAGG+TGG + tig0029172:13979-13998 Msa1440980:CDS 50.0%
GATGGAGACTGGTATGAGAC+GGG + tig0029172:14310-14329 Msa1440980:CDS 50.0%
GTGGTGTCTTTCGCAGCTTA+AGG - tig0029172:14479-14498 None:intergenic 50.0%
TAAGCTGCGAAAGACACCAC+AGG + tig0029172:14479-14498 Msa1440980:intron 50.0%
TTGAAGCTTGGACAGAGCAC+AGG - tig0029172:14708-14727 None:intergenic 50.0%
CTTGTAGACCAGTTAGCCCT+TGG + tig0029172:14778-14797 Msa1440980:intron 50.0%
TACATGTGCCAAGGGCTAAC+TGG - tig0029172:14789-14808 None:intergenic 50.0%
! TTTGCTATGCCAAGCAAGCC+TGG + tig0029172:15041-15060 Msa1440980:CDS 50.0%
! CTAAACTCTCCAGGCTTGCT+TGG - tig0029172:15053-15072 None:intergenic 50.0%
AACGGAGATGGAAGGACTTC+GGG - tig0029172:15089-15108 None:intergenic 50.0%
!! TGTGCCTATGTGATGGGCAT+TGG + tig0029172:15287-15306 Msa1440980:intron 50.0%
!! GTGCCTATGTGATGGGCATT+GGG + tig0029172:15288-15307 Msa1440980:intron 50.0%
GGACTTCTTCCAGCTATGCT+TGG + tig0029172:15911-15930 Msa1440980:CDS 50.0%
CTTCTTCCAGCTATGCTTGG+TGG + tig0029172:15914-15933 Msa1440980:CDS 50.0%
GCGTATGTTGAGGCTCAAGA+TGG + tig0029172:15941-15960 Msa1440980:CDS 50.0%
GTTCAGGCGAAATCAACCCA+AGG - tig0029172:16606-16625 None:intergenic 50.0%
TGCTACCCTAGAGACCATTG+AGG - tig0029172:18328-18347 None:intergenic 50.0%
CGTGAAATCCATTCTTCGGC+TGG - tig0029172:18596-18615 None:intergenic 50.0%
GGACGACACGGTTCACAATT+TGG - tig0029172:18875-18894 None:intergenic 50.0%
! TTCTGGGAAGCTTTGTGCAC+AGG + tig0029172:18982-19001 Msa1440980:CDS 50.0%
! ATTCGGAGCTACTTGCTGCT+CGG + tig0029172:19411-19430 Msa1440980:CDS 50.0%
GAACCTATAGAGTGGCGTGG+TGG + tig0029172:12658-12677 Msa1440980:five_prime_UTR 55.0%
AAGCCACCACGCCACTCTAT+AGG - tig0029172:12664-12683 None:intergenic 55.0%
! AGGACGAGGAGAAGCACGAA+AGG - tig0029172:13085-13104 None:intergenic 55.0%
TTGACAAGCCAGCCAGTCCT+GGG - tig0029172:13915-13934 None:intergenic 55.0%
CTGCCCAATGCCCATCACAT+AGG - tig0029172:15294-15313 None:intergenic 55.0%
! TCCAGCTATGCTTGGTGGAC+AGG + tig0029172:15919-15938 Msa1440980:CDS 55.0%
! TGGTGGACAGGCGTATGTTG+AGG + tig0029172:15931-15950 Msa1440980:CDS 55.0%
AGGGGGGTTTCCGTCCAAAA+AGG - tig0029172:17076-17095 None:intergenic 55.0%
! AAGATGGACTTCACCGCCCA+AGG - tig0029172:17136-17155 None:intergenic 55.0%
GCTTATGTGTCTGCAGCACC+AGG + tig0029172:17243-17262 Msa1440980:CDS 55.0%
GGAACCCCTTTCCAGTTCTC+AGG - tig0029172:17388-17407 None:intergenic 55.0%
! TTCGGAGCTACTTGCTGCTC+GGG + tig0029172:19412-19431 Msa1440980:CDS 55.0%
GTTGACAAGCCAGCCAGTCC+TGG - tig0029172:13916-13935 None:intergenic 60.0%
GCCTGTCCACCAAGCATAGC+TGG - tig0029172:15923-15942 None:intergenic 60.0%
CGACAGGCCATGACCTTGAC+TGG - tig0029172:16067-16086 None:intergenic 60.0%
! TCGGAGCTACTTGCTGCTCG+GGG + tig0029172:19413-19432 Msa1440980:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0029172 gene 12563 19797 12563 ID=Msa1440980;Name=Msa1440980
tig0029172 mRNA 12563 19797 12563 ID=Msa1440980-mRNA-1;Parent=Msa1440980;Name=Msa1440980-mRNA-1;_AED=0.06;_eAED=0.06;_QI=221|1|1|1|1|1|13|328|582
tig0029172 exon 12563 13138 12563 ID=Msa1440980-mRNA-1:exon:12572;Parent=Msa1440980-mRNA-1
tig0029172 exon 13917 14005 13917 ID=Msa1440980-mRNA-1:exon:12573;Parent=Msa1440980-mRNA-1
tig0029172 exon 14289 14346 14289 ID=Msa1440980-mRNA-1:exon:12574;Parent=Msa1440980-mRNA-1
tig0029172 exon 14958 15113 14958 ID=Msa1440980-mRNA-1:exon:12575;Parent=Msa1440980-mRNA-1
tig0029172 exon 15846 15994 15846 ID=Msa1440980-mRNA-1:exon:12576;Parent=Msa1440980-mRNA-1
tig0029172 exon 16731 16850 16731 ID=Msa1440980-mRNA-1:exon:12577;Parent=Msa1440980-mRNA-1
tig0029172 exon 17051 17264 17051 ID=Msa1440980-mRNA-1:exon:12578;Parent=Msa1440980-mRNA-1
tig0029172 exon 17362 17464 17362 ID=Msa1440980-mRNA-1:exon:12579;Parent=Msa1440980-mRNA-1
tig0029172 exon 17942 17989 17942 ID=Msa1440980-mRNA-1:exon:12580;Parent=Msa1440980-mRNA-1
tig0029172 exon 18211 18256 18211 ID=Msa1440980-mRNA-1:exon:12581;Parent=Msa1440980-mRNA-1
tig0029172 exon 18548 18735 18548 ID=Msa1440980-mRNA-1:exon:12582;Parent=Msa1440980-mRNA-1
tig0029172 exon 18853 19015 18853 ID=Msa1440980-mRNA-1:exon:12583;Parent=Msa1440980-mRNA-1
tig0029172 exon 19410 19797 19410 ID=Msa1440980-mRNA-1:exon:12584;Parent=Msa1440980-mRNA-1
tig0029172 five_prime_UTR 12563 12783 12563 ID=Msa1440980-mRNA-1:five_prime_utr;Parent=Msa1440980-mRNA-1
tig0029172 CDS 12784 13138 12784 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 13917 14005 13917 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 14289 14346 14289 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 14958 15113 14958 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 15846 15994 15846 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 16731 16850 16731 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 17051 17264 17051 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 17362 17464 17362 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 17942 17989 17942 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 18211 18256 18211 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 18548 18735 18548 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 18853 19015 18853 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 CDS 19410 19469 19410 ID=Msa1440980-mRNA-1:cds;Parent=Msa1440980-mRNA-1
tig0029172 three_prime_UTR 19470 19797 19470 ID=Msa1440980-mRNA-1:three_prime_utr;Parent=Msa1440980-mRNA-1
Gene Sequence

>Msa1440980

ATGGCTCTATATGGCTCTATATCATCACCAAATTTAAATTGGCAAATTGGGCCAAAAACCATATCAAAATCAACCTCTTCTTCTATGAACTCATATACAACAATTTCATTATCATTTTCTAGTAGCGTTTCAATGGGTCTTAACTTGAGGTTCAATCTTGCTTCAGCTTCAACTCGTTCTGCTAAGTGTAACAGGTTAAGGAACCATGGTTCTCCTTTGAAGGTTGTTTGCATTGATTATCCACGTCCTGAGCTTGATGATACTGTTAATTTCATTGAAGCTTCTTACTTGTCTTCTACCTTTCGTGCTTCTCCTCGTCCTACTAAACCTTTGAAGGTTGTTATTGCTGGTGCAGGACTGGCTGGCTTGTCAACTGCAAAGTATTTGGCAGATGCTGGTCACAAGCCTATATTGCTGGAGGCAAGAGATGTTCTAGGTGGAAAGATTGCTGCATGGAAAGATGAAGATGGAGACTGGTATGAGACGGGCCTACATATATTCTTTGGGGCTTACCCTAATGTGCAGAACCTATTTGGAGAACTCGGTATTAATGATCGGTTACAATGGAAGGAGCATTCTATGATCTTTGCTATGCCAAGCAAGCCTGGAGAGTTTAGTCGATTTGATTTTCCCGAAGTCCTTCCATCTCCGTTAAATGGAATATGGGCAATCTTGAGGAATAATGAGATGCTGACCTGGCCAGAGAAAATCAAATTTGCAATTGGACTTCTTCCAGCTATGCTTGGTGGACAGGCGTATGTTGAGGCTCAAGATGGTATTTCTGTCAAAGAATGGATGAGAAAACAGGGCATTCCTGAACGTGTAACTGATGAAGTGTTCATAGCAATGTCAAAGGCCCTAAACTTCATCAACCCTGATGAACTTTCAATGCAATGTATTTTGATTGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCTAAGATGGCCTTTTTGGACGGAAACCCCCCTGAAAGACTTTGTATGCCAATTGTTGATCATATTAAGTCCTTGGGCGGTGAAGTCCATCTTAATTCACGCATTAAAAATATTGAGCTAAACGATGATAACACAGTGAAAAGCTTTTTACTAACTAATGGGAAGGTGATTGAAGGGGATGCTTATGTGTCTGCAGCACCAGTGGATATTCTGAAGCTTCTTCTTCCTGAGAACTGGAAAGGGGTTCCTTATTTCCAGAGATTGGAGAAATTAGTTGGAGTTCCAGTCATAAATGTTCACATATGGTTTGACAGAAAACTGAAGAACACGTATGATCACCTTCTCTTTAGCAGAAGTCCCCTTCTAAGTGTATATGCCGACATGTCAGTAACTTGTAAGGAATACTATAACCCAAACCAGTCTATGTTGGAGCTGGTTTTTGCACCAGCCGAAGAATGGATTTCACGTAGTGACGAAGATATTATCGGTGCCACAATGTCTGAACTTGCCAAACTCTTCCCTGATGAAATTTCTGCAGACCAAAGCAAAGCAAAAATCATCAAGTACCACGTTGTTAAAACACCAAGGTCAGTTTACAAAACTGTTCCAAATTGTGAACCGTGTCGTCCCTTACAAAGATCTCCTATAGAAGGTTTCTATTTAGCTGGAGATTACACAAAACAAAAATATTTAGCTTCTATGGAAGGTGCTGTTCTTTCTGGGAAGCTTTGTGCACAGGCTATTGTACAGGATTCGGAGCTACTTGCTGCTCGGGGTCAGAAAAGAATAGCTCAAGCAAGTACTGTTTAA
Protein sequence

>Msa1440980

MALYGSISSPNLNWQIGPKTISKSTSSSMNSYTTISLSFSSSVSMGLNLRFNLASASTRSAKCNRLRNHGSPLKVVCIDYPRPELDDTVNFIEASYLSSTFRASPRPTKPLKVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPEVLPSPLNGIWAILRNNEMLTWPEKIKFAIGLLPAMLGGQAYVEAQDGISVKEWMRKQGIPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIKSLGGEVHLNSRIKNIELNDDNTVKSFLLTNGKVIEGDAYVSAAPVDILKLLLPENWKGVPYFQRLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDEDIIGATMSELAKLFPDEISADQSKAKIIKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLAARGQKRIAQASTV*