Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131150 | XP_003601473.2 | 94.779 | 249 | 6 | 1 | 3 | 251 | 2 | 243 | 1.92e-165 | 467 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131150 | sp|Q9FZ86|PDCB3_ARATH | 48.837 | 86 | 44 | 0 | 163 | 248 | 19 | 104 | 3.49e-22 | 93.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131150 | A0A396IY86 | 94.779 | 249 | 6 | 1 | 3 | 251 | 2 | 243 | 9.17e-166 | 467 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0015150 | Msa1131150 | 0.816808 | 4.569446e-52 | -8.615850e-47 |
Msa0025160 | Msa1131150 | 0.815566 | 8.657988e-52 | -8.615850e-47 |
Msa0029960 | Msa1131150 | 0.802721 | 4.903562e-49 | -8.615850e-47 |
Msa0069350 | Msa1131150 | 0.829202 | 5.873648e-55 | -8.615850e-47 |
Msa0072520 | Msa1131150 | 0.838035 | 3.652313e-57 | -8.615850e-47 |
Msa0086250 | Msa1131150 | 0.813396 | 2.614591e-51 | -8.615850e-47 |
Msa0108880 | Msa1131150 | 0.810683 | 1.020539e-50 | -8.615850e-47 |
Msa0612520 | Msa1131150 | 0.809308 | 2.017977e-50 | -8.615850e-47 |
Msa0620900 | Msa1131150 | 0.816471 | 5.436690e-52 | -8.615850e-47 |
Msa0691910 | Msa1131150 | 0.805125 | 1.552485e-49 | -8.615850e-47 |
Msa0695560 | Msa1131150 | 0.804459 | 2.138018e-49 | -8.615850e-47 |
Msa0132700 | Msa1131150 | 0.808138 | 3.588124e-50 | -8.615850e-47 |
Msa0155180 | Msa1131150 | 0.831689 | 1.447805e-55 | -8.615850e-47 |
Msa0161930 | Msa1131150 | 0.823442 | 1.381827e-53 | -8.615850e-47 |
Msa0173380 | Msa1131150 | 0.806111 | 9.638483e-50 | -8.615850e-47 |
Msa0181880 | Msa1131150 | 0.801635 | 8.203585e-49 | -8.615850e-47 |
Msa0384870 | Msa1131150 | 0.817099 | 3.931432e-52 | -8.615850e-47 |
Msa0420680 | Msa1131150 | 0.950951 | 5.672805e-109 | -8.615850e-47 |
Msa0451170 | Msa1131150 | 0.820743 | 5.837210e-53 | -8.615850e-47 |
Msa0482080 | Msa1131150 | 0.815967 | 7.046678e-52 | -8.615850e-47 |
Msa1034960 | Msa1131150 | 0.819063 | 1.413493e-52 | -8.615850e-47 |
Msa1046120 | Msa1131150 | 0.803850 | 2.863463e-49 | -8.615850e-47 |
Msa1091050 | Msa1131150 | 0.806276 | 8.899726e-50 | -8.615850e-47 |
Msa0359010 | Msa1131150 | 0.824854 | 6.440896e-54 | -8.615850e-47 |
Msa1130780 | Msa1131150 | 0.836354 | 9.830180e-57 | -8.615850e-47 |
Msa1131150 | Msa1187760 | 0.849582 | 2.948739e-60 | -8.615850e-47 |
Msa1131150 | Msa1209320 | 0.831992 | 1.218953e-55 | -8.615850e-47 |
Msa1131150 | Msa1209720 | 0.814721 | 1.333903e-51 | -8.615850e-47 |
Msa1131150 | Msa1228630 | 0.837694 | 4.469208e-57 | -8.615850e-47 |
Msa1131150 | Msa1255220 | 0.824506 | 7.779822e-54 | -8.615850e-47 |
Msa1131150 | Msa1341750 | 0.837337 | 5.517573e-57 | -8.615850e-47 |
Msa1131150 | Msa1342810 | 0.808661 | 2.775766e-50 | -8.615850e-47 |
Msa1131150 | Msa1356220 | 0.947195 | 1.077573e-105 | -8.615850e-47 |
Msa1131150 | Msa1417930 | 0.824600 | 7.391580e-54 | -8.615850e-47 |
Msa0486460 | Msa1131150 | 0.819540 | 1.100552e-52 | -8.615850e-47 |
Msa0498610 | Msa1131150 | 0.830224 | 3.312075e-55 | -8.615850e-47 |
Msa0512520 | Msa1131150 | 0.935666 | 5.921783e-97 | -8.615850e-47 |
Msa0557850 | Msa1131150 | 0.806514 | 7.928930e-50 | -8.615850e-47 |
Msa0562350 | Msa1131150 | 0.805644 | 1.208182e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131150 | MtrunA17_Chr3g0120401 | 94.779 | 249 | 6 | 1 | 3 | 251 | 2 | 243 | 1.77e-169 | 467 |
Msa1131150 | MtrunA17_Chr1g0213651 | 74.157 | 89 | 23 | 0 | 160 | 248 | 271 | 359 | 1.92e-43 | 150 |
Msa1131150 | MtrunA17_Chr5g0401301 | 61.538 | 91 | 33 | 2 | 160 | 248 | 324 | 414 | 4.76e-32 | 121 |
Msa1131150 | MtrunA17_Chr8g0378361 | 51.685 | 89 | 43 | 0 | 163 | 251 | 28 | 116 | 2.18e-28 | 106 |
Msa1131150 | MtrunA17_Chr1g0177171 | 55.294 | 85 | 37 | 1 | 165 | 248 | 406 | 490 | 5.28e-26 | 105 |
Msa1131150 | MtrunA17_Chr5g0447651 | 49.425 | 87 | 43 | 1 | 161 | 246 | 26 | 112 | 2.59e-24 | 94.0 |
Msa1131150 | MtrunA17_Chr8g0381081 | 45.000 | 100 | 54 | 1 | 152 | 250 | 44 | 143 | 1.27e-23 | 94.0 |
Msa1131150 | MtrunA17_Chr5g0439251 | 54.430 | 79 | 35 | 1 | 165 | 242 | 382 | 460 | 2.78e-23 | 97.8 |
Msa1131150 | MtrunA17_Chr8g0378381 | 45.238 | 84 | 46 | 0 | 165 | 248 | 32 | 115 | 3.19e-23 | 90.9 |
Msa1131150 | MtrunA17_Chr8g0378371 | 47.619 | 84 | 41 | 1 | 165 | 248 | 33 | 113 | 3.44e-23 | 90.9 |
Msa1131150 | MtrunA17_Chr1g0154991 | 46.429 | 84 | 45 | 0 | 165 | 248 | 20 | 103 | 2.05e-22 | 88.6 |
Msa1131150 | MtrunA17_Chr7g0271411 | 48.235 | 85 | 42 | 2 | 165 | 248 | 160 | 243 | 5.27e-22 | 92.4 |
Msa1131150 | MtrunA17_Chr2g0304061 | 47.126 | 87 | 45 | 1 | 165 | 251 | 158 | 243 | 1.04e-21 | 92.0 |
Msa1131150 | MtrunA17_Chr4g0076141 | 48.276 | 87 | 44 | 1 | 157 | 242 | 5 | 91 | 1.41e-21 | 86.3 |
Msa1131150 | MtrunA17_Chr8g0378401 | 45.679 | 81 | 44 | 0 | 165 | 245 | 32 | 112 | 1.55e-21 | 86.7 |
Msa1131150 | MtrunA17_Chr4g0076131 | 42.708 | 96 | 54 | 1 | 155 | 249 | 18 | 113 | 1.71e-21 | 86.7 |
Msa1131150 | MtrunA17_Chr4g0061401 | 50.562 | 89 | 43 | 1 | 160 | 248 | 19 | 106 | 1.88e-21 | 89.4 |
Msa1131150 | MtrunA17_Chr1g0193131 | 53.846 | 78 | 35 | 1 | 165 | 242 | 420 | 496 | 3.10e-21 | 92.4 |
Msa1131150 | MtrunA17_Chr3g0096451 | 40.179 | 112 | 63 | 3 | 140 | 248 | 85 | 195 | 4.95e-21 | 89.0 |
Msa1131150 | MtrunA17_Chr6g0487261 | 43.820 | 89 | 48 | 1 | 165 | 251 | 369 | 457 | 6.40e-21 | 91.3 |
Msa1131150 | MtrunA17_Chr5g0419121 | 54.167 | 72 | 33 | 0 | 163 | 234 | 20 | 91 | 1.33e-20 | 87.8 |
Msa1131150 | MtrunA17_Chr8g0389741 | 45.882 | 85 | 45 | 1 | 165 | 248 | 368 | 452 | 3.29e-20 | 89.4 |
Msa1131150 | MtrunA17_Chr4g0043151 | 52.778 | 72 | 34 | 0 | 163 | 234 | 19 | 90 | 1.84e-19 | 83.2 |
Msa1131150 | MtrunA17_Chr4g0075031 | 45.882 | 85 | 45 | 1 | 165 | 248 | 382 | 466 | 2.42e-19 | 86.7 |
Msa1131150 | MtrunA17_Chr5g0443331 | 44.318 | 88 | 47 | 2 | 165 | 251 | 108 | 194 | 3.21e-19 | 84.3 |
Msa1131150 | MtrunA17_Chr3g0121271 | 45.882 | 85 | 45 | 1 | 165 | 248 | 362 | 446 | 4.18e-19 | 85.9 |
Msa1131150 | MtrunA17_Chr8g0378621 | 45.977 | 87 | 46 | 1 | 163 | 248 | 362 | 448 | 1.35e-18 | 84.7 |
Msa1131150 | MtrunA17_Chr7g0234821 | 42.727 | 110 | 58 | 2 | 140 | 248 | 353 | 458 | 1.88e-18 | 84.0 |
Msa1131150 | MtrunA17_Chr8g0339191 | 42.268 | 97 | 51 | 2 | 151 | 246 | 364 | 456 | 2.23e-18 | 84.0 |
Msa1131150 | MtrunA17_Chr3g0144531 | 44.318 | 88 | 49 | 0 | 159 | 246 | 365 | 452 | 3.73e-18 | 83.2 |
Msa1131150 | MtrunA17_Chr4g0040911 | 38.947 | 95 | 57 | 1 | 155 | 248 | 27 | 121 | 6.27e-17 | 76.3 |
Msa1131150 | MtrunA17_Chr4g0034901 | 40.659 | 91 | 53 | 1 | 159 | 248 | 369 | 459 | 9.02e-17 | 79.3 |
Msa1131150 | MtrunA17_Chr7g0223961 | 35.354 | 99 | 64 | 0 | 148 | 246 | 348 | 446 | 2.21e-16 | 77.8 |
Msa1131150 | MtrunA17_Chr4g0043511 | 36.905 | 84 | 53 | 0 | 165 | 248 | 420 | 503 | 6.88e-16 | 76.6 |
Msa1131150 | MtrunA17_Chr1g0161011 | 43.529 | 85 | 47 | 1 | 165 | 248 | 361 | 445 | 9.07e-16 | 76.3 |
Msa1131150 | MtrunA17_Chr5g0434591 | 40.000 | 85 | 50 | 1 | 165 | 248 | 360 | 444 | 6.01e-15 | 73.9 |
Msa1131150 | MtrunA17_Chr2g0313891 | 38.095 | 84 | 51 | 1 | 165 | 248 | 30 | 112 | 1.29e-13 | 65.5 |
Msa1131150 | MtrunA17_Chr8g0380231 | 49.254 | 67 | 32 | 2 | 177 | 242 | 29 | 94 | 1.93e-13 | 64.7 |
Msa1131150 | MtrunA17_Chr3g0110371 | 37.647 | 85 | 52 | 1 | 165 | 248 | 361 | 445 | 1.07e-12 | 67.4 |
Msa1131150 | MtrunA17_Chr4g0046311 | 37.500 | 80 | 49 | 1 | 164 | 242 | 372 | 451 | 7.47e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131150 | AT1G79480.2 | 55.484 | 155 | 58 | 3 | 97 | 249 | 249 | 394 | 1.91e-43 | 151 |
Msa1131150 | AT1G79480.1 | 55.484 | 155 | 58 | 3 | 97 | 249 | 250 | 395 | 2.03e-43 | 151 |
Msa1131150 | AT5G67460.1 | 50.993 | 151 | 63 | 6 | 107 | 248 | 229 | 377 | 2.59e-38 | 137 |
Msa1131150 | AT5G67460.2 | 51.034 | 145 | 60 | 6 | 107 | 242 | 229 | 371 | 1.91e-35 | 130 |
Msa1131150 | AT4G13600.1 | 54.651 | 86 | 39 | 0 | 163 | 248 | 59 | 144 | 2.25e-30 | 113 |
Msa1131150 | AT2G04910.2 | 49.451 | 91 | 45 | 1 | 160 | 249 | 10 | 100 | 2.02e-26 | 99.4 |
Msa1131150 | AT5G35740.1 | 50.575 | 87 | 41 | 2 | 165 | 249 | 30 | 116 | 6.31e-24 | 93.2 |
Msa1131150 | AT2G04910.1 | 50.000 | 84 | 41 | 1 | 160 | 242 | 10 | 93 | 1.52e-23 | 92.4 |
Msa1131150 | AT1G18650.1 | 48.837 | 86 | 44 | 0 | 163 | 248 | 19 | 104 | 3.55e-23 | 93.2 |
Msa1131150 | AT1G18650.2 | 50.000 | 82 | 41 | 0 | 165 | 246 | 21 | 102 | 4.98e-23 | 91.3 |
Msa1131150 | AT2G30933.1 | 44.144 | 111 | 59 | 3 | 142 | 251 | 60 | 168 | 6.58e-23 | 93.6 |
Msa1131150 | AT5G55180.1 | 50.588 | 85 | 41 | 1 | 165 | 248 | 372 | 456 | 9.19e-23 | 96.7 |
Msa1131150 | AT4G26830.2 | 51.765 | 85 | 40 | 1 | 165 | 248 | 371 | 455 | 1.83e-22 | 95.9 |
Msa1131150 | AT4G26830.1 | 51.765 | 85 | 40 | 1 | 165 | 248 | 367 | 451 | 1.92e-22 | 95.9 |
Msa1131150 | AT4G05430.1 | 42.045 | 88 | 50 | 1 | 165 | 251 | 23 | 110 | 5.04e-22 | 89.0 |
Msa1131150 | AT2G05790.1 | 42.105 | 114 | 60 | 2 | 136 | 248 | 360 | 468 | 6.27e-22 | 94.4 |
Msa1131150 | AT1G11820.2 | 48.235 | 85 | 43 | 1 | 165 | 248 | 381 | 465 | 6.72e-22 | 94.7 |
Msa1131150 | AT4G05430.3 | 42.045 | 88 | 50 | 1 | 165 | 251 | 48 | 135 | 8.16e-22 | 89.4 |
Msa1131150 | AT2G30933.2 | 44.118 | 102 | 54 | 3 | 142 | 242 | 60 | 159 | 1.91e-21 | 88.2 |
Msa1131150 | AT2G30933.3 | 44.118 | 102 | 54 | 3 | 142 | 242 | 60 | 159 | 1.91e-21 | 88.2 |
Msa1131150 | AT1G29380.3 | 47.727 | 88 | 44 | 2 | 165 | 251 | 148 | 234 | 2.41e-21 | 90.1 |
Msa1131150 | AT5G61130.1 | 45.349 | 86 | 47 | 0 | 163 | 248 | 19 | 104 | 5.93e-21 | 87.8 |
Msa1131150 | AT5G56590.1 | 45.882 | 85 | 45 | 1 | 165 | 248 | 369 | 453 | 6.00e-21 | 91.7 |
Msa1131150 | AT1G29380.1 | 48.235 | 85 | 42 | 2 | 165 | 248 | 148 | 231 | 1.03e-20 | 89.4 |
Msa1131150 | AT3G13560.4 | 47.126 | 87 | 45 | 1 | 163 | 248 | 360 | 446 | 1.72e-20 | 90.5 |
Msa1131150 | AT3G13560.1 | 47.126 | 87 | 45 | 1 | 163 | 248 | 360 | 446 | 1.72e-20 | 90.5 |
Msa1131150 | AT3G13560.2 | 47.126 | 87 | 45 | 1 | 163 | 248 | 360 | 446 | 1.72e-20 | 90.5 |
Msa1131150 | AT3G13560.5 | 47.126 | 87 | 45 | 1 | 163 | 248 | 360 | 446 | 1.72e-20 | 90.5 |
Msa1131150 | AT3G13560.3 | 47.126 | 87 | 45 | 1 | 163 | 248 | 360 | 446 | 1.72e-20 | 90.5 |
Msa1131150 | AT4G34480.3 | 42.857 | 84 | 48 | 0 | 165 | 248 | 253 | 336 | 4.83e-20 | 88.6 |
Msa1131150 | AT5G55180.2 | 50.633 | 79 | 38 | 1 | 165 | 242 | 372 | 450 | 5.33e-20 | 89.0 |
Msa1131150 | AT4G34480.1 | 42.857 | 84 | 48 | 0 | 165 | 248 | 364 | 447 | 6.62e-20 | 89.0 |
Msa1131150 | AT5G63225.1 | 42.857 | 84 | 48 | 0 | 165 | 248 | 25 | 108 | 7.95e-20 | 82.4 |
Msa1131150 | AT5G24318.3 | 40.698 | 86 | 51 | 0 | 165 | 250 | 233 | 318 | 8.97e-20 | 87.0 |
Msa1131150 | AT5G08000.1 | 48.837 | 86 | 44 | 0 | 163 | 248 | 19 | 104 | 1.08e-19 | 84.3 |
Msa1131150 | AT1G29380.4 | 49.367 | 79 | 38 | 2 | 165 | 242 | 148 | 225 | 1.13e-19 | 85.1 |
Msa1131150 | AT1G29380.2 | 49.367 | 79 | 38 | 2 | 165 | 242 | 148 | 225 | 1.13e-19 | 85.1 |
Msa1131150 | AT4G29360.2 | 45.882 | 85 | 45 | 1 | 165 | 248 | 401 | 485 | 1.60e-19 | 87.8 |
Msa1131150 | AT4G29360.1 | 45.882 | 85 | 45 | 1 | 165 | 248 | 391 | 475 | 1.67e-19 | 87.8 |
Msa1131150 | AT5G63250.1 | 42.697 | 89 | 48 | 1 | 165 | 250 | 42 | 130 | 1.71e-19 | 82.0 |
Msa1131150 | AT5G08000.2 | 48.837 | 86 | 44 | 0 | 163 | 248 | 38 | 123 | 1.89e-19 | 84.0 |
Msa1131150 | AT5G24318.1 | 40.698 | 86 | 51 | 0 | 165 | 250 | 372 | 457 | 2.00e-19 | 87.4 |
Msa1131150 | AT1G66870.1 | 36.111 | 108 | 63 | 2 | 142 | 248 | 8 | 110 | 2.65e-19 | 80.9 |
Msa1131150 | AT2G01630.1 | 42.353 | 85 | 48 | 1 | 165 | 248 | 360 | 444 | 2.87e-19 | 87.0 |
Msa1131150 | AT1G66870.2 | 36.111 | 108 | 63 | 2 | 142 | 248 | 35 | 137 | 3.09e-19 | 81.6 |
Msa1131150 | AT1G11820.3 | 48.101 | 79 | 40 | 1 | 165 | 242 | 381 | 459 | 3.47e-19 | 86.7 |
Msa1131150 | AT1G69295.2 | 50.685 | 73 | 35 | 1 | 162 | 234 | 14 | 85 | 3.54e-19 | 83.6 |
Msa1131150 | AT2G29735.1 | 36.364 | 121 | 67 | 3 | 131 | 249 | 5 | 117 | 4.88e-19 | 80.5 |
Msa1131150 | AT4G05430.2 | 43.038 | 79 | 44 | 1 | 165 | 242 | 48 | 126 | 6.59e-19 | 80.5 |
Msa1131150 | AT1G09460.1 | 47.674 | 86 | 43 | 2 | 165 | 250 | 137 | 220 | 7.48e-19 | 84.7 |
Msa1131150 | AT1G66855.1 | 38.554 | 83 | 50 | 1 | 165 | 246 | 26 | 108 | 1.44e-18 | 79.0 |
Msa1131150 | AT1G69295.1 | 50.000 | 72 | 35 | 1 | 163 | 234 | 19 | 89 | 2.53e-18 | 81.3 |
Msa1131150 | AT4G09462.1 | 37.209 | 86 | 54 | 0 | 165 | 250 | 29 | 114 | 2.82e-18 | 78.2 |
Msa1131150 | AT5G63230.1 | 39.286 | 84 | 51 | 0 | 165 | 248 | 26 | 109 | 3.50e-18 | 78.2 |
Msa1131150 | AT5G63240.1 | 35.849 | 106 | 65 | 1 | 148 | 250 | 23 | 128 | 4.11e-18 | 78.6 |
Msa1131150 | AT4G09465.1 | 31.776 | 107 | 73 | 0 | 144 | 250 | 10 | 116 | 7.87e-18 | 77.4 |
Msa1131150 | AT4G09464.1 | 31.776 | 107 | 73 | 0 | 144 | 250 | 10 | 116 | 8.20e-18 | 77.0 |
Msa1131150 | AT4G09467.1 | 31.776 | 107 | 73 | 0 | 144 | 250 | 10 | 116 | 8.20e-18 | 77.0 |
Msa1131150 | AT1G66852.1 | 41.379 | 87 | 45 | 3 | 165 | 248 | 26 | 109 | 9.81e-18 | 76.6 |
Msa1131150 | AT4G09466.1 | 30.841 | 107 | 74 | 0 | 144 | 250 | 10 | 116 | 1.97e-17 | 76.3 |
Msa1131150 | AT5G24318.2 | 41.250 | 80 | 47 | 0 | 165 | 244 | 372 | 451 | 2.69e-17 | 80.9 |
Msa1131150 | AT2G01630.3 | 43.038 | 79 | 44 | 1 | 165 | 242 | 360 | 438 | 3.20e-17 | 80.9 |
Msa1131150 | AT2G16230.1 | 39.286 | 84 | 51 | 0 | 165 | 248 | 366 | 449 | 3.57e-17 | 80.9 |
Msa1131150 | AT3G55430.1 | 39.024 | 82 | 50 | 0 | 165 | 246 | 366 | 447 | 1.40e-16 | 79.0 |
Msa1131150 | AT4G09090.1 | 30.841 | 107 | 74 | 0 | 144 | 250 | 10 | 116 | 2.01e-16 | 73.6 |
Msa1131150 | AT1G66250.1 | 37.647 | 85 | 52 | 1 | 165 | 248 | 368 | 452 | 7.10e-16 | 77.0 |
Msa1131150 | AT1G13830.2 | 44.444 | 72 | 40 | 0 | 163 | 234 | 33 | 104 | 8.50e-16 | 74.3 |
Msa1131150 | AT1G13830.1 | 44.444 | 72 | 40 | 0 | 163 | 234 | 19 | 90 | 9.82e-16 | 73.9 |
Msa1131150 | AT4G16165.1 | 35.294 | 85 | 54 | 1 | 165 | 248 | 26 | 110 | 1.40e-15 | 71.2 |
Msa1131150 | AT5G53600.1 | 32.692 | 104 | 64 | 2 | 145 | 248 | 14 | 111 | 1.61e-15 | 70.9 |
Msa1131150 | AT1G26450.1 | 44.595 | 74 | 40 | 1 | 163 | 236 | 19 | 91 | 1.68e-15 | 73.2 |
Msa1131150 | AT3G23770.1 | 37.755 | 98 | 60 | 1 | 152 | 248 | 374 | 471 | 6.88e-15 | 73.9 |
Msa1131150 | AT3G07320.1 | 41.860 | 86 | 49 | 1 | 164 | 248 | 370 | 455 | 1.63e-14 | 72.8 |
Msa1131150 | AT5G53610.1 | 40.476 | 84 | 49 | 1 | 165 | 248 | 28 | 110 | 3.21e-14 | 67.4 |
Msa1131150 | AT2G39640.1 | 32.941 | 85 | 57 | 0 | 163 | 247 | 458 | 542 | 4.03e-14 | 72.0 |
Msa1131150 | AT2G39640.1 | 35.366 | 82 | 53 | 0 | 165 | 246 | 359 | 440 | 3.19e-13 | 69.3 |
Msa1131150 | AT2G43670.1 | 35.294 | 85 | 54 | 1 | 165 | 249 | 35 | 118 | 4.80e-14 | 67.4 |
Msa1131150 | AT2G03505.3 | 38.889 | 72 | 44 | 0 | 163 | 234 | 19 | 90 | 3.63e-13 | 64.7 |
Msa1131150 | AT3G58100.1 | 37.079 | 89 | 55 | 1 | 161 | 248 | 37 | 125 | 3.92e-13 | 66.2 |
Msa1131150 | AT2G03505.4 | 38.889 | 72 | 44 | 0 | 163 | 234 | 19 | 90 | 5.03e-13 | 65.9 |
Msa1131150 | AT2G03505.1 | 38.889 | 72 | 44 | 0 | 163 | 234 | 19 | 90 | 5.03e-13 | 65.9 |
Msa1131150 | AT2G03505.2 | 38.889 | 72 | 44 | 0 | 163 | 234 | 19 | 90 | 5.03e-13 | 65.9 |
Msa1131150 | AT3G58100.2 | 37.931 | 87 | 53 | 1 | 161 | 246 | 113 | 199 | 5.08e-13 | 67.4 |
Msa1131150 | AT2G43660.1 | 31.356 | 118 | 80 | 1 | 133 | 249 | 2 | 119 | 4.26e-12 | 62.0 |
Msa1131150 | AT2G42930.1 | 37.209 | 86 | 53 | 1 | 160 | 245 | 35 | 119 | 5.68e-12 | 62.0 |
Msa1131150 | AT2G43660.2 | 29.915 | 117 | 75 | 2 | 140 | 249 | 4 | 120 | 2.17e-11 | 60.1 |
Msa1131150 | AT4G14080.1 | 31.000 | 100 | 68 | 1 | 150 | 248 | 374 | 473 | 5.86e-11 | 62.4 |
Find 82 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGGACTATGCTTGTGGGTC+TGG | 0.148531 | 7_3:+83667859 | Msa1131150:CDS |
TTAATTAGATGCATTATATT+TGG | 0.230496 | 7_3:+83669589 | Msa1131150:three_prime_UTR |
CTTGATGAATCCATTGGAAT+TGG | 0.263454 | 7_3:-83667216 | None:intergenic |
TGGACTATGCTTGTGGGTCT+GGG | 0.289091 | 7_3:+83667860 | Msa1131150:CDS |
TCCATAGCCAGTTGAATTAT+AGG | 0.302335 | 7_3:-83667841 | None:intergenic |
GATGAGCAATGTTGAATCTA+AGG | 0.322497 | 7_3:-83667248 | None:intergenic |
GGGTTTGGAACAGGTGAATA+AGG | 0.327081 | 7_3:-83667595 | None:intergenic |
TATTTCTAAAATGAACCTTA+TGG | 0.327927 | 7_3:+83669665 | Msa1131150:three_prime_UTR |
AGCCCACCTAAAAGTGTTAT+AGG | 0.340995 | 7_3:+83667709 | Msa1131150:CDS |
ACACCAATGCACAAAATTAG+AGG | 0.343222 | 7_3:-83667189 | None:intergenic |
TCAGATTTAGATTCTTCATA+TGG | 0.344846 | 7_3:+83667508 | Msa1131150:CDS |
TGTAAATCAGTTCAGCCTAA+TGG | 0.349309 | 7_3:+83667889 | Msa1131150:CDS |
CTTATGCATTCAATAGCTAT+TGG | 0.355474 | 7_3:+83667950 | Msa1131150:CDS |
GAGTTTCTTCCATGATTTGA+TGG | 0.359457 | 7_3:-83667443 | None:intergenic |
GGTGGAAGGGGTTGAGAAGA+AGG | 0.373189 | 7_3:-83667535 | None:intergenic |
AAGAAACTCAAATATCAAAA+TGG | 0.376268 | 7_3:+83667457 | Msa1131150:CDS |
AAAACATCATGAGGTGGGTT+TGG | 0.378635 | 7_3:-83667610 | None:intergenic |
CATCTCTAAATATCAAATTA+TGG | 0.386719 | 7_3:-83669706 | None:intergenic |
GTAAATCAGTTCAGCCTAAT+GGG | 0.395511 | 7_3:+83667890 | Msa1131150:CDS |
AGCCACCACAATATGCTATC+TGG | 0.408308 | 7_3:+83667791 | Msa1131150:CDS |
TCCTGATCCTATAATTCAAC+TGG | 0.420616 | 7_3:+83667834 | Msa1131150:CDS |
GCCAGTTGAATTATAGGATC+AGG | 0.436233 | 7_3:-83667835 | None:intergenic |
TTTGCAGATGCTATAAATCA+TGG | 0.443939 | 7_3:+83667400 | Msa1131150:intron |
CTGATGGAGAGTAAGAGAAA+TGG | 0.448722 | 7_3:-83667135 | None:intergenic |
GATGGGCTTGGAGGTGGCGG+CGG | 0.449114 | 7_3:-83667673 | None:intergenic |
GAATAAGGTGGTAGAGAGGT+AGG | 0.451500 | 7_3:-83667580 | None:intergenic |
TCATGAGGTGGGTTTGGAAC+AGG | 0.452737 | 7_3:-83667604 | None:intergenic |
TTGCTATAATACATAGCATT+CGG | 0.460360 | 7_3:+83669502 | Msa1131150:three_prime_UTR |
TCCTATAATTCAACTGGCTA+TGG | 0.461085 | 7_3:+83667840 | Msa1131150:CDS |
TGGCTATGGACTATGCTTGT+GGG | 0.470072 | 7_3:+83667854 | Msa1131150:CDS |
TTTGATGGGCTTGGAGGTGG+CGG | 0.473631 | 7_3:-83667676 | None:intergenic |
GAACTAGACAAAATCAAGCT+AGG | 0.476772 | 7_3:-83669633 | None:intergenic |
GGTGGTGGTGGATAAACAAT+AGG | 0.486021 | 7_3:-83667754 | None:intergenic |
TGATAGTAATACACAAAAGA+AGG | 0.494597 | 7_3:-83669780 | None:intergenic |
TGAATATGAAACCAACCATA+AGG | 0.498667 | 7_3:-83669680 | None:intergenic |
GGCTGGAAGCATATCCCATT+AGG | 0.500978 | 7_3:-83667904 | None:intergenic |
TATTGGCAGAACACTAAGAT+TGG | 0.504275 | 7_3:+83667967 | Msa1131150:CDS |
GCATGTGCCAACACTGTGTT+GGG | 0.505340 | 7_3:-83667925 | None:intergenic |
AGGTGAATAAGGTGGTAGAG+AGG | 0.507925 | 7_3:-83667584 | None:intergenic |
CTGGCTATGGACTATGCTTG+TGG | 0.509897 | 7_3:+83667853 | Msa1131150:CDS |
TCTAAAATGAACCTTATGGT+TGG | 0.510200 | 7_3:+83669669 | Msa1131150:three_prime_UTR |
TGGTGTTAATCCAATTCCAA+TGG | 0.514623 | 7_3:+83667206 | Msa1131150:exon |
ATAAGAAAATACATTGGAAG+AGG | 0.515220 | 7_3:-83669546 | None:intergenic |
GTGCCAACACTGTGTTGGGC+TGG | 0.515870 | 7_3:-83667921 | None:intergenic |
TTATGACTTGAAGGTGGTGG+TGG | 0.522446 | 7_3:-83667766 | None:intergenic |
ATTATAGGATCAGGAACTGT+AGG | 0.522750 | 7_3:-83667826 | None:intergenic |
GGTGGTAGAGAGGTAGGTTG+TGG | 0.528352 | 7_3:-83667574 | None:intergenic |
GGCAGAACACTAAGATTGGT+GGG | 0.533300 | 7_3:+83667971 | Msa1131150:CDS |
TAAGCTCTTGATGAATCCAT+TGG | 0.534192 | 7_3:-83667222 | None:intergenic |
GAAGCTACTCCATCAAATCA+TGG | 0.534607 | 7_3:+83667434 | Msa1131150:CDS |
GGACTATGCTTGTGGGTCTG+GGG | 0.539971 | 7_3:+83667861 | Msa1131150:CDS |
TGCATGGTTTACCACACAAA+GGG | 0.541460 | 7_3:-83667302 | None:intergenic |
AACTAGACAAAATCAAGCTA+GGG | 0.548793 | 7_3:-83669632 | None:intergenic |
GATGCTATAAATCATGGAAG+AGG | 0.563923 | 7_3:+83667406 | Msa1131150:intron |
GGTGGCAAGTATACTTGAGG+TGG | 0.566837 | 7_3:-83667733 | None:intergenic |
TGGCAGAACACTAAGATTGG+TGG | 0.568883 | 7_3:+83667970 | Msa1131150:CDS |
AGCTAGGGAGGATACGATCA+AGG | 0.572146 | 7_3:-83669617 | None:intergenic |
CAAGTGAATTGAAAGGTGGA+AGG | 0.573973 | 7_3:-83667549 | None:intergenic |
AGCATGTGCCAACACTGTGT+TGG | 0.585546 | 7_3:-83667926 | None:intergenic |
GATAGTAATACACAAAAGAA+GGG | 0.595287 | 7_3:-83669779 | None:intergenic |
TGTTGCATAAGAAAATACAT+TGG | 0.601508 | 7_3:-83669552 | None:intergenic |
AAGTGAATTGAAAGGTGGAA+GGG | 0.615025 | 7_3:-83667548 | None:intergenic |
CTTCCAGCCCAACACAGTGT+TGG | 0.616634 | 7_3:+83667918 | Msa1131150:CDS |
TAGACAAAATCAAGCTAGGG+AGG | 0.616936 | 7_3:-83669629 | None:intergenic |
GCAGAACACTAAGATTGGTG+GGG | 0.618966 | 7_3:+83667972 | Msa1131150:CDS |
AGTGAATTGAAAGGTGGAAG+GGG | 0.620889 | 7_3:-83667547 | None:intergenic |
ATAATGCATCTAATTAAGCA+AGG | 0.626292 | 7_3:-83669583 | None:intergenic |
CAGAACACTAAGATTGGTGG+GGG | 0.628305 | 7_3:+83667973 | Msa1131150:CDS |
CGGCGGCGACATTGTAACAG+TGG | 0.637027 | 7_3:-83667656 | None:intergenic |
GAGTGGAAACTAGCATCAAG+AGG | 0.637802 | 7_3:-83667275 | None:intergenic |
GGTGGTGGATAAACAATAGG+TGG | 0.638764 | 7_3:-83667751 | None:intergenic |
TTTGGAACAGGTGAATAAGG+TGG | 0.645722 | 7_3:-83667592 | None:intergenic |
ATAGGTGGCAAGTATACTTG+AGG | 0.650538 | 7_3:-83667736 | None:intergenic |
ATGCATGGTTTACCACACAA+AGG | 0.652538 | 7_3:-83667303 | None:intergenic |
GTGGCAAGTATACTTGAGGT+GGG | 0.653749 | 7_3:-83667732 | None:intergenic |
CTCCATCAGCAAAATCTGTG+AGG | 0.675876 | 7_3:+83667149 | Msa1131150:five_prime_UTR |
CACCAGATAGCATATTGTGG+TGG | 0.680993 | 7_3:-83667793 | None:intergenic |
ACCACACAAAGGGAAAAGAG+TGG | 0.683572 | 7_3:-83667292 | None:intergenic |
ACACACCAGATAGCATATTG+TGG | 0.683997 | 7_3:-83667796 | None:intergenic |
TGTGGTGCAAGTGAATTGAA+AGG | 0.698579 | 7_3:-83667556 | None:intergenic |
GGTGCAAGTGAATTGAAAGG+TGG | 0.701271 | 7_3:-83667553 | None:intergenic |
ACAATATGCTATCTGGTGTG+TGG | 0.720976 | 7_3:+83667798 | Msa1131150:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAGTTTTTTATTTAAAAG+AGG | - | chr7_3:83669273-83669292 | None:intergenic | 10.0% |
!! | TTTATCAGCAATTAAAAAAA+AGG | - | chr7_3:83668340-83668359 | None:intergenic | 15.0% |
!!! | ATAAAGGAACTTTTTTTTTT+TGG | + | chr7_3:83668374-83668393 | Msa1131150:intron | 15.0% |
!! | TAATGATAAAATTATATGCA+TGG | + | chr7_3:83668574-83668593 | Msa1131150:intron | 15.0% |
!!! | GTCTTTTTAATTTAAAACTA+TGG | + | chr7_3:83669389-83669408 | Msa1131150:intron | 15.0% |
!! | TTAATTAGATGCATTATATT+TGG | + | chr7_3:83669589-83669608 | Msa1131150:three_prime_UTR | 15.0% |
!! | AAGAAACTCAAATATCAAAA+TGG | + | chr7_3:83667457-83667476 | Msa1131150:CDS | 20.0% |
!!! | TTCAACAAATTTTCATCATT+TGG | + | chr7_3:83667481-83667500 | Msa1131150:CDS | 20.0% |
!! | ACATAATTTGATGTAATCAT+AGG | + | chr7_3:83668172-83668191 | Msa1131150:intron | 20.0% |
!!! | CATCACTAAATGATTATTTT+TGG | - | chr7_3:83668299-83668318 | None:intergenic | 20.0% |
!!! | AAATTTTCTCATATGGATAA+AGG | + | chr7_3:83668358-83668377 | Msa1131150:intron | 20.0% |
!!! | TTTTTTTTTGGTACAACATA+TGG | + | chr7_3:83668386-83668405 | Msa1131150:intron | 20.0% |
!!! | TTGGACCATTTATTTTTAAT+CGG | - | chr7_3:83668943-83668962 | None:intergenic | 20.0% |
!!! | CAACATATCATATTTAAGTT+TGG | - | chr7_3:83669006-83669025 | None:intergenic | 20.0% |
!!! | ATCCCTTTTTTTTTTTTTTG+AGG | + | chr7_3:83669094-83669113 | Msa1131150:intron | 20.0% |
!! | CACCTCAAAAAAAAAAAAAA+GGG | - | chr7_3:83669099-83669118 | None:intergenic | 20.0% |
!!! | GTTTTAAATTAAAAAGACGA+CGG | - | chr7_3:83669387-83669406 | None:intergenic | 20.0% |
!!! | TATTTCTAAAATGAACCTTA+TGG | + | chr7_3:83669665-83669684 | Msa1131150:three_prime_UTR | 20.0% |
!! | CATCTCTAAATATCAAATTA+TGG | - | chr7_3:83669709-83669728 | None:intergenic | 20.0% |
! | CATATAATTATATGCATGCA+TGG | - | chr7_3:83667321-83667340 | None:intergenic | 25.0% |
! | TCAGATTTAGATTCTTCATA+TGG | + | chr7_3:83667508-83667527 | Msa1131150:CDS | 25.0% |
!! | GCTGATAAAATTTTCTCATA+TGG | + | chr7_3:83668351-83668370 | Msa1131150:intron | 25.0% |
!! | AACCCTTAATGATATTTTAC+TGG | + | chr7_3:83668449-83668468 | Msa1131150:intron | 25.0% |
! | CACCAGTAAAATATCATTAA+GGG | - | chr7_3:83668454-83668473 | None:intergenic | 25.0% |
! | ACACCAGTAAAATATCATTA+AGG | - | chr7_3:83668455-83668474 | None:intergenic | 25.0% |
!! | TGATATTTTACTGGTGTATT+TGG | + | chr7_3:83668458-83668477 | Msa1131150:intron | 25.0% |
! | AAAATTATATGCATGGACTT+TGG | + | chr7_3:83668581-83668600 | Msa1131150:intron | 25.0% |
! | AGTTGATCTAATAATTACGA+TGG | + | chr7_3:83668629-83668648 | Msa1131150:intron | 25.0% |
! | ACTTAACTAACGGTTAAATA+AGG | - | chr7_3:83668808-83668827 | None:intergenic | 25.0% |
! | ATGTGAAATGACTTAACTAA+CGG | - | chr7_3:83668818-83668837 | None:intergenic | 25.0% |
!!! | ACCATTTATTTTTAATCGGA+CGG | - | chr7_3:83668939-83668958 | None:intergenic | 25.0% |
! | GCACCTCAAAAAAAAAAAAA+AGG | - | chr7_3:83669100-83669119 | None:intergenic | 25.0% |
! | TTGCTATAATACATAGCATT+CGG | + | chr7_3:83669502-83669521 | Msa1131150:three_prime_UTR | 25.0% |
! | ATAAGAAAATACATTGGAAG+AGG | - | chr7_3:83669549-83669568 | None:intergenic | 25.0% |
! | TGTTGCATAAGAAAATACAT+TGG | - | chr7_3:83669555-83669574 | None:intergenic | 25.0% |
! | ATAATGCATCTAATTAAGCA+AGG | - | chr7_3:83669586-83669605 | None:intergenic | 25.0% |
! | GATAGTAATACACAAAAGAA+GGG | - | chr7_3:83669782-83669801 | None:intergenic | 25.0% |
! | TGATAGTAATACACAAAAGA+AGG | - | chr7_3:83669783-83669802 | None:intergenic | 25.0% |
! | ACTTTAGTGTGTGTAACTTT+TGG | + | chr7_3:83667373-83667392 | Msa1131150:intron | 30.0% |
TTTGCAGATGCTATAAATCA+TGG | + | chr7_3:83667400-83667419 | Msa1131150:intron | 30.0% | |
CTTATGCATTCAATAGCTAT+TGG | + | chr7_3:83667950-83667969 | Msa1131150:CDS | 30.0% | |
TTGGTACAACATATGGATAA+AGG | + | chr7_3:83668393-83668412 | Msa1131150:intron | 30.0% | |
ATACTATATCCACACAACAA+AGG | + | chr7_3:83668841-83668860 | Msa1131150:intron | 30.0% | |
CCAAATGAAAAGAAATCAAG+TGG | - | chr7_3:83668873-83668892 | None:intergenic | 30.0% | |
! | CCACTTGATTTCTTTTCATT+TGG | + | chr7_3:83668870-83668889 | Msa1131150:intron | 30.0% |
ATGCATTCTATGTAGTTACA+AGG | - | chr7_3:83669361-83669380 | None:intergenic | 30.0% | |
AACTAGACAAAATCAAGCTA+GGG | - | chr7_3:83669635-83669654 | None:intergenic | 30.0% | |
! | TCTAAAATGAACCTTATGGT+TGG | + | chr7_3:83669669-83669688 | Msa1131150:three_prime_UTR | 30.0% |
TGAATATGAAACCAACCATA+AGG | - | chr7_3:83669683-83669702 | None:intergenic | 30.0% | |
! | CAACCTCTAATTTTGTGCAT+TGG | + | chr7_3:83667186-83667205 | Msa1131150:five_prime_UTR | 35.0% |
ACACCAATGCACAAAATTAG+AGG | - | chr7_3:83667192-83667211 | None:intergenic | 35.0% | |
! | TGGTGTTAATCCAATTCCAA+TGG | + | chr7_3:83667206-83667225 | Msa1131150:exon | 35.0% |
CTTGATGAATCCATTGGAAT+TGG | - | chr7_3:83667219-83667238 | None:intergenic | 35.0% | |
TAAGCTCTTGATGAATCCAT+TGG | - | chr7_3:83667225-83667244 | None:intergenic | 35.0% | |
GATGAGCAATGTTGAATCTA+AGG | - | chr7_3:83667251-83667270 | None:intergenic | 35.0% | |
GATGCTATAAATCATGGAAG+AGG | + | chr7_3:83667406-83667425 | Msa1131150:intron | 35.0% | |
GAGTTTCTTCCATGATTTGA+TGG | - | chr7_3:83667446-83667465 | None:intergenic | 35.0% | |
AAGTGAATTGAAAGGTGGAA+GGG | - | chr7_3:83667551-83667570 | None:intergenic | 35.0% | |
! | GACATTGTAACAGTGGTTTT+AGG | - | chr7_3:83667652-83667671 | None:intergenic | 35.0% |
! | TTTTTATGACTTGAAGGTGG+TGG | - | chr7_3:83667772-83667791 | None:intergenic | 35.0% |
ATTATAGGATCAGGAACTGT+AGG | - | chr7_3:83667829-83667848 | None:intergenic | 35.0% | |
TCCTGATCCTATAATTCAAC+TGG | + | chr7_3:83667834-83667853 | Msa1131150:CDS | 35.0% | |
TCCTATAATTCAACTGGCTA+TGG | + | chr7_3:83667840-83667859 | Msa1131150:CDS | 35.0% | |
TCCATAGCCAGTTGAATTAT+AGG | - | chr7_3:83667844-83667863 | None:intergenic | 35.0% | |
TGTAAATCAGTTCAGCCTAA+TGG | + | chr7_3:83667889-83667908 | Msa1131150:CDS | 35.0% | |
GTAAATCAGTTCAGCCTAAT+GGG | + | chr7_3:83667890-83667909 | Msa1131150:CDS | 35.0% | |
TATTGGCAGAACACTAAGAT+TGG | + | chr7_3:83667967-83667986 | Msa1131150:CDS | 35.0% | |
! | ACCATCTTTGTTTACCTTTG+TGG | + | chr7_3:83668056-83668075 | Msa1131150:intron | 35.0% |
ACCACAAAGGTAAACAAAGA+TGG | - | chr7_3:83668060-83668079 | None:intergenic | 35.0% | |
TATGAGATTCTTACCGATGT+CGG | - | chr7_3:83668147-83668166 | None:intergenic | 35.0% | |
TTTCACCATATAGTCACCTA+TGG | - | chr7_3:83668269-83668288 | None:intergenic | 35.0% | |
!! | CTTTTCATTTGGAATCCATC+CGG | + | chr7_3:83668881-83668900 | Msa1131150:intron | 35.0% |
!! | TTTTCATTTGGAATCCATCC+GGG | + | chr7_3:83668882-83668901 | Msa1131150:intron | 35.0% |
AAAACCCGAATTCCTAACAT+CGG | + | chr7_3:83668910-83668929 | Msa1131150:intron | 35.0% | |
GCCGTCCGATTAAAAATAAA+TGG | + | chr7_3:83668935-83668954 | Msa1131150:intron | 35.0% | |
!!! | TTTTGAGGTGCACATTTCAT+TGG | + | chr7_3:83669109-83669128 | Msa1131150:intron | 35.0% |
CCACATACACATATTCACAA+CGG | + | chr7_3:83669180-83669199 | Msa1131150:intron | 35.0% | |
! | ATCGAACAATGTAGGTTTTG+AGG | - | chr7_3:83669302-83669321 | None:intergenic | 35.0% |
GAATCTAGATCGAACAATGT+AGG | - | chr7_3:83669310-83669329 | None:intergenic | 35.0% | |
TAACCTGCGAAATAAATCGT+GGG | - | chr7_3:83669446-83669465 | None:intergenic | 35.0% | |
ATAACCTGCGAAATAAATCG+TGG | - | chr7_3:83669447-83669466 | None:intergenic | 35.0% | |
! | TGGAAGAGGTTTTCAATCTT+TGG | - | chr7_3:83669535-83669554 | None:intergenic | 35.0% |
GAACTAGACAAAATCAAGCT+AGG | - | chr7_3:83669636-83669655 | None:intergenic | 35.0% | |
CTGATGGAGAGTAAGAGAAA+TGG | - | chr7_3:83667138-83667157 | None:intergenic | 40.0% | |
! | ATCCTCACAGATTTTGCTGA+TGG | - | chr7_3:83667154-83667173 | None:intergenic | 40.0% |
TGCATGGTTTACCACACAAA+GGG | - | chr7_3:83667305-83667324 | None:intergenic | 40.0% | |
ATGCATGGTTTACCACACAA+AGG | - | chr7_3:83667306-83667325 | None:intergenic | 40.0% | |
GAAGCTACTCCATCAAATCA+TGG | + | chr7_3:83667434-83667453 | Msa1131150:CDS | 40.0% | |
AGTGAATTGAAAGGTGGAAG+GGG | - | chr7_3:83667550-83667569 | None:intergenic | 40.0% | |
CAAGTGAATTGAAAGGTGGA+AGG | - | chr7_3:83667552-83667571 | None:intergenic | 40.0% | |
TGTGGTGCAAGTGAATTGAA+AGG | - | chr7_3:83667559-83667578 | None:intergenic | 40.0% | |
! | TTTGGAACAGGTGAATAAGG+TGG | - | chr7_3:83667595-83667614 | None:intergenic | 40.0% |
! | AAAACATCATGAGGTGGGTT+TGG | - | chr7_3:83667613-83667632 | None:intergenic | 40.0% |
! | ACCCACCTCATGATGTTTTT+AGG | + | chr7_3:83667614-83667633 | Msa1131150:CDS | 40.0% |
GCCTAAAAACATCATGAGGT+GGG | - | chr7_3:83667618-83667637 | None:intergenic | 40.0% | |
!!! | GTAACAGTGGTTTTAGGACT+TGG | - | chr7_3:83667646-83667665 | None:intergenic | 40.0% |
!!! | GGCTTGGAACATGTTTTGAT+GGG | - | chr7_3:83667693-83667712 | None:intergenic | 40.0% |
!! | ATAACACTTTTAGGTGGGCT+TGG | - | chr7_3:83667709-83667728 | None:intergenic | 40.0% |
!! | AGCCCACCTAAAAGTGTTAT+AGG | + | chr7_3:83667709-83667728 | Msa1131150:CDS | 40.0% |
!! | GGCCTATAACACTTTTAGGT+GGG | - | chr7_3:83667714-83667733 | None:intergenic | 40.0% |
ATAGGTGGCAAGTATACTTG+AGG | - | chr7_3:83667739-83667758 | None:intergenic | 40.0% | |
! | GGCTTTTTATGACTTGAAGG+TGG | - | chr7_3:83667775-83667794 | None:intergenic | 40.0% |
! | GGTGGCTTTTTATGACTTGA+AGG | - | chr7_3:83667778-83667797 | None:intergenic | 40.0% |
ACACACCAGATAGCATATTG+TGG | - | chr7_3:83667799-83667818 | None:intergenic | 40.0% | |
ACAATATGCTATCTGGTGTG+TGG | + | chr7_3:83667798-83667817 | Msa1131150:CDS | 40.0% | |
GCCAGTTGAATTATAGGATC+AGG | - | chr7_3:83667838-83667857 | None:intergenic | 40.0% | |
! | GATGGTAGTGCAAACTTACT+TGG | - | chr7_3:83668042-83668061 | None:intergenic | 40.0% |
ACAAATGATGCACACCACAA+AGG | - | chr7_3:83668073-83668092 | None:intergenic | 40.0% | |
AGTCCGTGACTATATGTGTT+CGG | + | chr7_3:83668099-83668118 | Msa1131150:intron | 40.0% | |
TGTCCGAACACATATAGTCA+CGG | - | chr7_3:83668105-83668124 | None:intergenic | 40.0% | |
ATATGTGTTCGGACACGATA+CGG | + | chr7_3:83668110-83668129 | Msa1131150:intron | 40.0% | |
! | TCATTGGATTAGGTGTGTTC+CGG | - | chr7_3:83668235-83668254 | None:intergenic | 40.0% |
GCACAAACACTCATTGGATT+AGG | - | chr7_3:83668245-83668264 | None:intergenic | 40.0% | |
TATGGAGCACAAACACTCAT+TGG | - | chr7_3:83668251-83668270 | None:intergenic | 40.0% | |
AATGAGTGTTTGTGCTCCAT+AGG | + | chr7_3:83668250-83668269 | Msa1131150:intron | 40.0% | |
AAAAAAGGGATCAGACATCC+TGG | - | chr7_3:83669085-83669104 | None:intergenic | 40.0% | |
CCGTTGTGAATATGTGTATG+TGG | - | chr7_3:83669183-83669202 | None:intergenic | 40.0% | |
AGGATTCACTTTCACGACAT+AGG | - | chr7_3:83669341-83669360 | None:intergenic | 40.0% | |
CGAAATAAATCGTGGGTTTG+AGG | - | chr7_3:83669439-83669458 | None:intergenic | 40.0% | |
AAACCCACGATTTATTTCGC+AGG | + | chr7_3:83669440-83669459 | Msa1131150:intron | 40.0% | |
TAGACAAAATCAAGCTAGGG+AGG | - | chr7_3:83669632-83669651 | None:intergenic | 40.0% | |
CTCCATCAGCAAAATCTGTG+AGG | + | chr7_3:83667149-83667168 | Msa1131150:five_prime_UTR | 45.0% | |
GAGTGGAAACTAGCATCAAG+AGG | - | chr7_3:83667278-83667297 | None:intergenic | 45.0% | |
! | TCCACTCTTTTCCCTTTGTG+TGG | + | chr7_3:83667291-83667310 | Msa1131150:CDS | 45.0% |
ACCACACAAAGGGAAAAGAG+TGG | - | chr7_3:83667295-83667314 | None:intergenic | 45.0% | |
GGTGCAAGTGAATTGAAAGG+TGG | - | chr7_3:83667556-83667575 | None:intergenic | 45.0% | |
GAATAAGGTGGTAGAGAGGT+AGG | - | chr7_3:83667583-83667602 | None:intergenic | 45.0% | |
AGGTGAATAAGGTGGTAGAG+AGG | - | chr7_3:83667587-83667606 | None:intergenic | 45.0% | |
! | GGGTTTGGAACAGGTGAATA+AGG | - | chr7_3:83667598-83667617 | None:intergenic | 45.0% |
GGCCTAAAAACATCATGAGG+TGG | - | chr7_3:83667619-83667638 | None:intergenic | 45.0% | |
GGTGGCCTAAAAACATCATG+AGG | - | chr7_3:83667622-83667641 | None:intergenic | 45.0% | |
!!! | ACAGTGGTTTTAGGACTTGG+TGG | - | chr7_3:83667643-83667662 | None:intergenic | 45.0% |
!!! | ACATGTTTTGATGGGCTTGG+AGG | - | chr7_3:83667685-83667704 | None:intergenic | 45.0% |
!!! | GGAACATGTTTTGATGGGCT+TGG | - | chr7_3:83667688-83667707 | None:intergenic | 45.0% |
!! | GGGCTTGGAACATGTTTTGA+TGG | - | chr7_3:83667694-83667713 | None:intergenic | 45.0% |
! | GGGCCTATAACACTTTTAGG+TGG | - | chr7_3:83667715-83667734 | None:intergenic | 45.0% |
! | GGTGGGCCTATAACACTTTT+AGG | - | chr7_3:83667718-83667737 | None:intergenic | 45.0% |
GTGGCAAGTATACTTGAGGT+GGG | - | chr7_3:83667735-83667754 | None:intergenic | 45.0% | |
!! | GGTGGTGGATAAACAATAGG+TGG | - | chr7_3:83667754-83667773 | None:intergenic | 45.0% |
!! | GGTGGTGGTGGATAAACAAT+AGG | - | chr7_3:83667757-83667776 | None:intergenic | 45.0% |
! | TTATGACTTGAAGGTGGTGG+TGG | - | chr7_3:83667769-83667788 | None:intergenic | 45.0% |
AGCCACCACAATATGCTATC+TGG | + | chr7_3:83667791-83667810 | Msa1131150:CDS | 45.0% | |
CACCAGATAGCATATTGTGG+TGG | - | chr7_3:83667796-83667815 | None:intergenic | 45.0% | |
! | TGGCTATGGACTATGCTTGT+GGG | + | chr7_3:83667854-83667873 | Msa1131150:CDS | 45.0% |
TGGCAGAACACTAAGATTGG+TGG | + | chr7_3:83667970-83667989 | Msa1131150:CDS | 45.0% | |
GGCAGAACACTAAGATTGGT+GGG | + | chr7_3:83667971-83667990 | Msa1131150:CDS | 45.0% | |
GCAGAACACTAAGATTGGTG+GGG | + | chr7_3:83667972-83667991 | Msa1131150:CDS | 45.0% | |
CAGAACACTAAGATTGGTGG+GGG | + | chr7_3:83667973-83667992 | Msa1131150:CDS | 45.0% | |
GTGCTCCATAGGTGACTATA+TGG | + | chr7_3:83668261-83668280 | Msa1131150:intron | 45.0% | |
! | TGGCATATGCCTTTGTTGTG+TGG | - | chr7_3:83668853-83668872 | None:intergenic | 45.0% |
!! | GAATTCGGGTTTTCTCTACC+CGG | - | chr7_3:83668903-83668922 | None:intergenic | 45.0% |
GCTACCGATGTTAGGAATTC+GGG | - | chr7_3:83668917-83668936 | None:intergenic | 45.0% | |
GGCTACCGATGTTAGGAATT+CGG | - | chr7_3:83668918-83668937 | None:intergenic | 45.0% | |
ATCAGACATCCTGGTACTCA+GGG | - | chr7_3:83669076-83669095 | None:intergenic | 45.0% | |
CATTTCATTGGCACACCTTG+TGG | + | chr7_3:83669121-83669140 | Msa1131150:intron | 45.0% | |
CGCGTGAATCTAATACCACA+AGG | - | chr7_3:83669139-83669158 | None:intergenic | 45.0% | |
!! | TTCACAACGGCGTTGACTAA+TGG | + | chr7_3:83669193-83669212 | Msa1131150:intron | 45.0% |
!!! | TATTTTATTATAATATTTAG+TGG | - | chr7_3:83668672-83668691 | None:intergenic | 5.0% |
!!! | AATAAAATAATTTATTCTTT+TGG | + | chr7_3:83668683-83668702 | Msa1131150:intron | 5.0% |
!! | AATTAAAATATATATTTGTT+TGG | - | chr7_3:83668962-83668981 | None:intergenic | 5.0% |
! | TCATGAGGTGGGTTTGGAAC+AGG | - | chr7_3:83667607-83667626 | None:intergenic | 50.0% |
!!! | GTGGTTTTAGGACTTGGTGG+TGG | - | chr7_3:83667640-83667659 | None:intergenic | 50.0% |
!!! | TGTTTTGATGGGCTTGGAGG+TGG | - | chr7_3:83667682-83667701 | None:intergenic | 50.0% |
GGTGGCAAGTATACTTGAGG+TGG | - | chr7_3:83667736-83667755 | None:intergenic | 50.0% | |
! | CTGGCTATGGACTATGCTTG+TGG | + | chr7_3:83667853-83667872 | Msa1131150:CDS | 50.0% |
! | ATGGACTATGCTTGTGGGTC+TGG | + | chr7_3:83667859-83667878 | Msa1131150:CDS | 50.0% |
TGGACTATGCTTGTGGGTCT+GGG | + | chr7_3:83667860-83667879 | Msa1131150:CDS | 50.0% | |
! | GGCTGGAAGCATATCCCATT+AGG | - | chr7_3:83667907-83667926 | None:intergenic | 50.0% |
GCATGTGCCAACACTGTGTT+GGG | - | chr7_3:83667928-83667947 | None:intergenic | 50.0% | |
AGCATGTGCCAACACTGTGT+TGG | - | chr7_3:83667929-83667948 | None:intergenic | 50.0% | |
GATTAGGTGTGTTCCGGTGT+CGG | - | chr7_3:83668229-83668248 | None:intergenic | 50.0% | |
GATCAGACATCCTGGTACTC+AGG | - | chr7_3:83669077-83669096 | None:intergenic | 50.0% | |
AGCTAGGGAGGATACGATCA+AGG | - | chr7_3:83669620-83669639 | None:intergenic | 50.0% | |
GGTGGAAGGGGTTGAGAAGA+AGG | - | chr7_3:83667538-83667557 | None:intergenic | 55.0% | |
GGTGGTAGAGAGGTAGGTTG+TGG | - | chr7_3:83667577-83667596 | None:intergenic | 55.0% | |
!! | TTTGATGGGCTTGGAGGTGG+CGG | - | chr7_3:83667679-83667698 | None:intergenic | 55.0% |
GGACTATGCTTGTGGGTCTG+GGG | + | chr7_3:83667861-83667880 | Msa1131150:CDS | 55.0% | |
CTTCCAGCCCAACACAGTGT+TGG | + | chr7_3:83667918-83667937 | Msa1131150:CDS | 55.0% | |
!!! | GGTGGGGGCACTTGTGATTT+TGG | + | chr7_3:83667988-83668007 | Msa1131150:CDS | 55.0% |
!!! | GGGGGCACTTGTGATTTTGG+TGG | + | chr7_3:83667991-83668010 | Msa1131150:CDS | 55.0% |
! | TCGGGTTTTCTCTACCCGGA+TGG | - | chr7_3:83668899-83668918 | None:intergenic | 55.0% |
ATCGGACGGCTACCGATGTT+AGG | - | chr7_3:83668925-83668944 | None:intergenic | 55.0% | |
TGTGTGCTTCCCTGAGTACC+AGG | + | chr7_3:83669064-83669083 | Msa1131150:intron | 55.0% | |
CGGCGGCGACATTGTAACAG+TGG | - | chr7_3:83667659-83667678 | None:intergenic | 60.0% | |
GTGCCAACACTGTGTTGGGC+TGG | - | chr7_3:83667924-83667943 | None:intergenic | 60.0% | |
GGACACTGACACGCCGACAT+CGG | + | chr7_3:83668131-83668150 | Msa1131150:intron | 60.0% | |
!! | CACTGACTCGTGTCCGACAC+CGG | + | chr7_3:83668213-83668232 | Msa1131150:intron | 60.0% |
! | GATGGGCTTGGAGGTGGCGG+CGG | - | chr7_3:83667676-83667695 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 83667123 | 83669818 | 83667123 | ID=Msa1131150;Name=Msa1131150 |
chr7_3 | mRNA | 83667123 | 83669818 | 83667123 | ID=Msa1131150-mRNA-1;Parent=Msa1131150;Name=Msa1131150-mRNA-1;_AED=0.03;_eAED=0.03;_QI=102|1|1|1|0.5|0.66|3|325|251 |
chr7_3 | exon | 83667123 | 83667312 | 83667123 | ID=Msa1131150-mRNA-1:exon:24811;Parent=Msa1131150-mRNA-1 |
chr7_3 | exon | 83667407 | 83668042 | 83667407 | ID=Msa1131150-mRNA-1:exon:24812;Parent=Msa1131150-mRNA-1 |
chr7_3 | exon | 83669462 | 83669818 | 83669462 | ID=Msa1131150-mRNA-1:exon:24813;Parent=Msa1131150-mRNA-1 |
chr7_3 | five_prime_UTR | 83667123 | 83667224 | 83667123 | ID=Msa1131150-mRNA-1:five_prime_utr;Parent=Msa1131150-mRNA-1 |
chr7_3 | CDS | 83667225 | 83667312 | 83667225 | ID=Msa1131150-mRNA-1:cds;Parent=Msa1131150-mRNA-1 |
chr7_3 | CDS | 83667407 | 83668042 | 83667407 | ID=Msa1131150-mRNA-1:cds;Parent=Msa1131150-mRNA-1 |
chr7_3 | CDS | 83669462 | 83669493 | 83669462 | ID=Msa1131150-mRNA-1:cds;Parent=Msa1131150-mRNA-1 |
chr7_3 | three_prime_UTR | 83669494 | 83669818 | 83669494 | ID=Msa1131150-mRNA-1:three_prime_utr;Parent=Msa1131150-mRNA-1 |
Gene Sequence |
Protein sequence |