AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1356220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1356220 MtrunA17_Chr3g0120401 94.779 249 6 1 18 266 2 243 7.03e-169 466
Msa1356220 MtrunA17_Chr1g0213651 74.157 89 23 0 175 263 271 359 2.71e-43 150
Msa1356220 MtrunA17_Chr5g0401301 61.538 91 33 2 175 263 324 414 6.03e-32 121
Msa1356220 MtrunA17_Chr8g0378361 51.685 89 43 0 178 266 28 116 2.81e-28 106
Msa1356220 MtrunA17_Chr1g0177171 55.294 85 37 1 180 263 406 490 6.12e-26 105
Msa1356220 MtrunA17_Chr5g0447651 49.425 87 43 1 176 261 26 112 2.36e-24 94.4
Msa1356220 MtrunA17_Chr8g0381081 45.000 100 54 1 167 265 44 143 1.38e-23 94.4
Msa1356220 MtrunA17_Chr8g0378381 45.238 84 46 0 180 263 32 115 3.38e-23 91.3
Msa1356220 MtrunA17_Chr5g0439251 54.430 79 35 1 180 257 382 460 3.39e-23 98.2
Msa1356220 MtrunA17_Chr8g0378371 47.619 84 41 1 180 263 33 113 3.87e-23 91.3
Msa1356220 MtrunA17_Chr1g0154991 46.429 84 45 0 180 263 20 103 3.04e-22 88.6
Msa1356220 MtrunA17_Chr7g0271411 48.235 85 42 2 180 263 160 243 7.17e-22 92.4
Msa1356220 MtrunA17_Chr4g0076141 48.276 87 44 1 172 257 5 91 1.37e-21 86.7
Msa1356220 MtrunA17_Chr2g0304061 47.126 87 45 1 180 266 158 243 1.38e-21 92.0
Msa1356220 MtrunA17_Chr8g0378401 45.679 81 44 0 180 260 32 112 1.51e-21 87.0
Msa1356220 MtrunA17_Chr4g0076131 42.708 96 54 1 170 264 18 113 1.70e-21 87.0
Msa1356220 MtrunA17_Chr4g0061401 50.562 89 43 1 175 263 19 106 2.14e-21 89.4
Msa1356220 MtrunA17_Chr1g0193131 53.846 78 35 1 180 257 420 496 3.43e-21 92.8
Msa1356220 MtrunA17_Chr3g0096451 40.179 112 63 3 155 263 85 195 4.99e-21 89.4
Msa1356220 MtrunA17_Chr6g0487261 43.820 89 48 1 180 266 369 457 8.94e-21 91.3
Msa1356220 MtrunA17_Chr5g0419121 54.167 72 33 0 178 249 20 91 1.88e-20 87.8
Msa1356220 MtrunA17_Chr8g0389741 45.882 85 45 1 180 263 368 452 4.15e-20 89.4
Msa1356220 MtrunA17_Chr4g0043151 52.778 72 34 0 178 249 19 90 2.27e-19 83.6
Msa1356220 MtrunA17_Chr4g0075031 45.882 85 45 1 180 263 382 466 2.33e-19 87.4
Msa1356220 MtrunA17_Chr5g0443331 44.318 88 47 2 180 266 108 194 3.46e-19 84.7
Msa1356220 MtrunA17_Chr3g0121271 43.269 104 56 2 163 263 343 446 3.61e-19 86.7
Msa1356220 MtrunA17_Chr8g0378621 45.977 87 46 1 178 263 362 448 1.36e-18 85.1
Msa1356220 MtrunA17_Chr7g0234821 42.727 110 58 2 155 263 353 458 1.78e-18 84.3
Msa1356220 MtrunA17_Chr8g0339191 42.268 97 51 2 166 261 364 456 2.41e-18 84.0
Msa1356220 MtrunA17_Chr3g0144531 44.318 88 49 0 174 261 365 452 5.06e-18 83.2
Msa1356220 MtrunA17_Chr4g0040911 38.947 95 57 1 170 263 27 121 5.06e-17 76.6
Msa1356220 MtrunA17_Chr4g0034901 40.659 91 53 1 174 263 369 459 1.06e-16 79.3
Msa1356220 MtrunA17_Chr7g0223961 35.354 99 64 0 163 261 348 446 3.26e-16 77.8
Msa1356220 MtrunA17_Chr4g0043511 36.905 84 53 0 180 263 420 503 5.97e-16 77.4
Msa1356220 MtrunA17_Chr1g0161011 42.045 88 50 1 180 266 361 448 9.00e-16 76.6
Msa1356220 MtrunA17_Chr5g0434591 40.000 85 50 1 180 263 360 444 6.32e-15 74.3
Msa1356220 MtrunA17_Chr2g0313891 38.095 84 51 1 180 263 30 112 1.49e-13 65.5
Msa1356220 MtrunA17_Chr8g0380231 49.254 67 32 2 192 257 29 94 2.19e-13 64.7
Msa1356220 MtrunA17_Chr3g0110371 37.647 85 52 1 180 263 361 445 1.04e-12 67.4
Msa1356220 MtrunA17_Chr4g0046311 36.471 85 53 1 174 257 367 451 7.56e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1356220 AT1G79480.1 55.484 155 58 3 112 264 250 395 2.07e-43 152
Msa1356220 AT1G79480.2 55.484 155 58 3 112 264 249 394 2.81e-43 151
Msa1356220 AT5G67460.1 50.993 151 63 6 122 263 229 377 3.44e-38 138
Msa1356220 AT5G67460.2 51.034 145 60 6 122 257 229 371 2.43e-35 130
Msa1356220 AT4G13600.1 54.651 86 39 0 178 263 59 144 3.16e-30 113
Msa1356220 AT2G04910.2 49.451 91 45 1 175 264 10 100 2.49e-26 99.4
Msa1356220 AT5G35740.1 45.833 96 50 2 171 264 21 116 6.94e-24 93.6
Msa1356220 AT2G04910.1 50.000 84 41 1 175 257 10 93 1.72e-23 92.8
Msa1356220 AT1G18650.1 48.837 86 44 0 178 263 19 104 3.88e-23 93.6
Msa1356220 AT1G18650.2 50.000 82 41 0 180 261 21 102 5.06e-23 91.7
Msa1356220 AT2G30933.1 44.144 111 59 3 157 266 60 168 7.36e-23 94.0
Msa1356220 AT5G55180.1 50.588 85 41 1 180 263 372 456 9.53e-23 97.1
Msa1356220 AT4G26830.1 51.765 85 40 1 180 263 367 451 2.02e-22 96.3
Msa1356220 AT4G26830.2 51.765 85 40 1 180 263 371 455 2.07e-22 96.3
Msa1356220 AT4G05430.1 42.045 88 50 1 180 266 23 110 5.88e-22 89.4
Msa1356220 AT2G05790.1 42.105 114 60 2 151 263 360 468 6.93e-22 94.7
Msa1356220 AT1G11820.2 48.235 85 43 1 180 263 381 465 7.54e-22 94.7
Msa1356220 AT4G05430.3 42.045 88 50 1 180 266 48 135 9.25e-22 89.4
Msa1356220 AT2G30933.2 44.118 102 54 3 157 257 60 159 2.34e-21 88.2
Msa1356220 AT2G30933.3 44.118 102 54 3 157 257 60 159 2.34e-21 88.2
Msa1356220 AT1G29380.3 47.727 88 44 2 180 266 148 234 2.36e-21 90.5
Msa1356220 AT5G61130.1 45.349 86 47 0 178 263 19 104 6.50e-21 88.2
Msa1356220 AT5G56590.1 45.882 85 45 1 180 263 369 453 7.56e-21 92.0
Msa1356220 AT1G29380.1 48.235 85 42 2 180 263 148 231 9.38e-21 90.1
Msa1356220 AT3G13560.4 45.556 90 48 1 178 266 360 449 1.53e-20 90.9
Msa1356220 AT3G13560.1 45.556 90 48 1 178 266 360 449 1.53e-20 90.9
Msa1356220 AT3G13560.2 45.556 90 48 1 178 266 360 449 1.53e-20 90.9
Msa1356220 AT3G13560.5 45.556 90 48 1 178 266 360 449 1.53e-20 90.9
Msa1356220 AT3G13560.3 45.556 90 48 1 178 266 360 449 1.53e-20 90.9
Msa1356220 AT4G34480.3 42.857 84 48 0 180 263 253 336 5.40e-20 89.0
Msa1356220 AT5G55180.2 50.633 79 38 1 180 257 372 450 5.48e-20 89.4
Msa1356220 AT4G34480.1 42.857 84 48 0 180 263 364 447 7.59e-20 89.0
Msa1356220 AT5G63225.1 42.857 84 48 0 180 263 25 108 9.61e-20 82.4
Msa1356220 AT1G29380.4 49.367 79 38 2 180 257 148 225 1.22e-19 85.5
Msa1356220 AT1G29380.2 49.367 79 38 2 180 257 148 225 1.22e-19 85.5
Msa1356220 AT5G08000.1 48.837 86 44 0 178 263 19 104 1.22e-19 84.7
Msa1356220 AT5G24318.3 40.698 86 51 0 180 265 233 318 1.22e-19 87.0
Msa1356220 AT4G29360.2 45.882 85 45 1 180 263 401 485 1.68e-19 88.2
Msa1356220 AT5G08000.2 48.837 86 44 0 178 263 38 123 1.70e-19 84.7
Msa1356220 AT4G29360.1 45.882 85 45 1 180 263 391 475 1.98e-19 87.8
Msa1356220 AT5G63250.1 42.697 89 48 1 180 265 42 130 2.18e-19 82.0
Msa1356220 AT5G24318.1 40.698 86 51 0 180 265 372 457 2.50e-19 87.4
Msa1356220 AT1G66870.1 36.111 108 63 2 157 263 8 110 3.22e-19 81.3
Msa1356220 AT1G66870.2 36.111 108 63 2 157 263 35 137 3.47e-19 81.6
Msa1356220 AT2G01630.1 42.353 85 48 1 180 263 360 444 3.52e-19 87.0
Msa1356220 AT1G11820.3 48.101 79 40 1 180 257 381 459 3.55e-19 87.0
Msa1356220 AT1G69295.2 50.685 73 35 1 177 249 14 85 3.55e-19 84.0
Msa1356220 AT2G29735.1 41.379 87 49 1 180 264 31 117 5.79e-19 80.5
Msa1356220 AT4G05430.2 43.038 79 44 1 180 257 48 126 7.91e-19 80.5
Msa1356220 AT1G09460.1 47.674 86 43 2 180 265 137 220 9.81e-19 84.7
Msa1356220 AT1G66855.1 37.647 85 52 1 180 263 26 110 1.37e-18 79.3
Msa1356220 AT1G69295.1 50.000 72 35 1 178 249 19 89 2.97e-18 81.6
Msa1356220 AT4G09462.1 37.209 86 54 0 180 265 29 114 3.02e-18 78.6
Msa1356220 AT5G63230.1 39.286 84 51 0 180 263 26 109 3.70e-18 78.2
Msa1356220 AT5G63240.1 35.849 106 65 1 163 265 23 128 4.64e-18 78.6
Msa1356220 AT4G09465.1 33.333 96 64 0 170 265 21 116 9.11e-18 77.4
Msa1356220 AT4G09464.1 33.333 96 64 0 170 265 21 116 1.03e-17 77.4
Msa1356220 AT4G09467.1 33.333 96 64 0 170 265 21 116 1.03e-17 77.4
Msa1356220 AT1G66852.1 41.379 87 45 3 180 263 26 109 1.18e-17 77.0
Msa1356220 AT4G09466.1 32.292 96 65 0 170 265 21 116 2.47e-17 76.3
Msa1356220 AT2G01630.3 43.038 79 44 1 180 257 360 438 3.45e-17 81.3
Msa1356220 AT5G24318.2 41.250 80 47 0 180 259 372 451 3.79e-17 80.9
Msa1356220 AT2G16230.1 39.286 84 51 0 180 263 366 449 3.92e-17 81.3
Msa1356220 AT3G55430.1 38.095 84 52 0 180 263 366 449 1.59e-16 79.3
Msa1356220 AT4G09090.1 30.841 107 74 0 159 265 10 116 2.44e-16 73.6
Msa1356220 AT1G66250.1 37.647 85 52 1 180 263 368 452 6.68e-16 77.4
Msa1356220 AT1G13830.2 44.444 72 40 0 178 249 33 104 9.28e-16 74.3
Msa1356220 AT1G13830.1 44.444 72 40 0 178 249 19 90 1.15e-15 73.9
Msa1356220 AT4G16165.1 34.884 86 55 1 180 264 26 111 1.61e-15 71.2
Msa1356220 AT5G53600.1 32.692 104 64 2 160 263 14 111 2.02e-15 70.9
Msa1356220 AT1G26450.1 44.595 74 40 1 178 251 19 91 2.24e-15 73.2
Msa1356220 AT3G23770.1 37.755 98 60 1 167 263 374 471 6.63e-15 74.3
Msa1356220 AT3G07320.1 41.860 86 49 1 179 263 370 455 1.90e-14 73.2
Msa1356220 AT5G53610.1 40.476 84 49 1 180 263 28 110 3.06e-14 67.8
Msa1356220 AT2G39640.1 32.941 85 57 0 178 262 458 542 4.19e-14 72.4
Msa1356220 AT2G39640.1 35.366 82 53 0 180 261 359 440 4.42e-13 69.3
Msa1356220 AT2G43670.1 35.294 85 54 1 180 264 35 118 5.45e-14 67.4
Msa1356220 AT3G58100.1 37.079 89 55 1 176 263 37 125 3.39e-13 66.6
Msa1356220 AT2G03505.3 38.889 72 44 0 178 249 19 90 4.07e-13 65.1
Msa1356220 AT3G58100.2 37.931 87 53 1 176 261 113 199 4.81e-13 67.8
Msa1356220 AT2G03505.4 38.889 72 44 0 178 249 19 90 5.35e-13 65.9
Msa1356220 AT2G03505.1 38.889 72 44 0 178 249 19 90 5.35e-13 65.9
Msa1356220 AT2G03505.2 38.889 72 44 0 178 249 19 90 5.35e-13 65.9
Msa1356220 AT2G43660.1 31.356 118 80 1 148 264 2 119 4.90e-12 62.0
Msa1356220 AT2G42930.1 37.209 86 53 1 175 260 35 119 5.68e-12 62.4
Msa1356220 AT2G43660.2 32.632 95 63 1 171 264 26 120 2.52e-11 60.1
Msa1356220 AT4G14080.1 31.000 100 68 1 165 263 374 473 6.39e-11 62.8

Find 82 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGACTATGCTTGTGGGTC+TGG 0.148531 tig0015544:-5666 Msa1356220:CDS
TTAATTAGATGCATTATATT+TGG 0.230496 tig0015544:-3902 Msa1356220:three_prime_UTR
CTTGATGAATCCATTGGAAT+TGG 0.263454 tig0015544:+6309 Msa1356220:intergenic
TGGACTATGCTTGTGGGTCT+GGG 0.289091 tig0015544:-5665 Msa1356220:CDS
TCCATAGCCAGTTGAATTAT+AGG 0.302335 tig0015544:+5684 Msa1356220:intergenic
GATGAGCAATGTTGAATCTA+AGG 0.322497 tig0015544:+6277 Msa1356220:intergenic
GGGTTTGGAACAGGTGAATA+AGG 0.327081 tig0015544:+5930 Msa1356220:intergenic
TATTTCTAAAATGAACCTTA+TGG 0.327927 tig0015544:-3826 Msa1356220:three_prime_UTR
AGCCCACCTAAAAGTGTTAT+AGG 0.340995 tig0015544:-5816 Msa1356220:CDS
ACACCAATGCACAAAATTAG+AGG 0.343222 tig0015544:+6336 Msa1356220:intergenic
TCAGATTTAGATTCTTCATA+TGG 0.344846 tig0015544:-6017 Msa1356220:CDS
TGTAAATCAGTTCAGCCTAA+TGG 0.349309 tig0015544:-5636 Msa1356220:CDS
CTTATGCATTCAATAGCTAT+TGG 0.355474 tig0015544:-5575 Msa1356220:CDS
GAGTTTCTTCCATGATTTGA+TGG 0.359457 tig0015544:+6082 Msa1356220:intergenic
GGTGGAAGGGGTTGAGAAGA+AGG 0.373189 tig0015544:+5990 Msa1356220:intergenic
AAGAAACTCAAATATCAAAA+TGG 0.376268 tig0015544:-6068 Msa1356220:CDS
AAAACATCATGAGGTGGGTT+TGG 0.378635 tig0015544:+5915 Msa1356220:intergenic
CATCTCTAAATATCAAATTA+TGG 0.386719 tig0015544:+3785 Msa1356220:intergenic
GTAAATCAGTTCAGCCTAAT+GGG 0.395511 tig0015544:-5635 Msa1356220:CDS
AGCCACCACAATATGCTATC+TGG 0.408308 tig0015544:-5734 Msa1356220:CDS
TCCTGATCCTATAATTCAAC+TGG 0.420616 tig0015544:-5691 Msa1356220:CDS
GATGGGCTTGGAGGTGGTGG+CGG 0.424976 tig0015544:+5852 Msa1356220:intergenic
GCCAGTTGAATTATAGGATC+AGG 0.436233 tig0015544:+5690 Msa1356220:intergenic
TTTGCAGATGCTATAAATCA+TGG 0.443939 tig0015544:-6125 Msa1356220:intron
CTGATGGAGAGTAAGAGAAA+TGG 0.448722 tig0015544:+6390 Msa1356220:intergenic
GAATAAGGTGGTAGAGAGGT+AGG 0.451500 tig0015544:+5945 Msa1356220:intergenic
TCATGAGGTGGGTTTGGAAC+AGG 0.452737 tig0015544:+5921 Msa1356220:intergenic
TTGCTATAATACATAGCATT+CGG 0.460360 tig0015544:-3989 Msa1356220:three_prime_UTR
TCCTATAATTCAACTGGCTA+TGG 0.461085 tig0015544:-5685 Msa1356220:CDS
TTTGATGGGCTTGGAGGTGG+TGG 0.461788 tig0015544:+5849 Msa1356220:intergenic
TGGCTATGGACTATGCTTGT+GGG 0.470072 tig0015544:-5671 Msa1356220:CDS
GAACTAGACAAAATCAAGCT+AGG 0.476772 tig0015544:+3858 Msa1356220:intergenic
GGTGGTGGTGGATAAACAAT+AGG 0.486021 tig0015544:+5771 Msa1356220:intergenic
TGATAGTAATACACAAAAGA+AGG 0.494597 tig0015544:+3711 Msa1356220:intergenic
TGAATATGAAACCAACCATA+AGG 0.498667 tig0015544:+3811 Msa1356220:intergenic
GGCTGGAAGCATATCCCATT+AGG 0.500978 tig0015544:+5621 Msa1356220:intergenic
TATTGGCAGAACACTAAGAT+TGG 0.504275 tig0015544:-5558 Msa1356220:CDS
GCATGTGCCAACACTGTGTT+GGG 0.505340 tig0015544:+5600 Msa1356220:intergenic
AGGTGAATAAGGTGGTAGAG+AGG 0.507925 tig0015544:+5941 Msa1356220:intergenic
CTGGCTATGGACTATGCTTG+TGG 0.509897 tig0015544:-5672 Msa1356220:CDS
TCTAAAATGAACCTTATGGT+TGG 0.510200 tig0015544:-3822 Msa1356220:three_prime_UTR
TGGTGTTAATCCAATTCCAA+TGG 0.514623 tig0015544:-6319 Msa1356220:CDS
ATAAGAAAATACATTGGAAG+AGG 0.515220 tig0015544:+3945 Msa1356220:intergenic
GTGCCAACACTGTGTTGGGC+TGG 0.515870 tig0015544:+5604 Msa1356220:intergenic
TTATGACTTGAAGGTGGTGG+TGG 0.522446 tig0015544:+5759 Msa1356220:intergenic
ATTATAGGATCAGGAACTGT+AGG 0.522750 tig0015544:+5699 Msa1356220:intergenic
GGTGGTAGAGAGGTAGGTTG+TGG 0.528352 tig0015544:+5951 Msa1356220:intergenic
GGCAGAACACTAAGATTGGT+GGG 0.533300 tig0015544:-5554 Msa1356220:CDS
TAAGCTCTTGATGAATCCAT+TGG 0.534192 tig0015544:+6303 Msa1356220:intergenic
GAAGCTACTCCATCAAATCA+TGG 0.534607 tig0015544:-6091 Msa1356220:CDS
GGACTATGCTTGTGGGTCTG+GGG 0.539971 tig0015544:-5664 Msa1356220:CDS
TGCATGGTTTACCACACAAA+GGG 0.541460 tig0015544:+6223 Msa1356220:intergenic
AACTAGACAAAATCAAGCTA+GGG 0.548793 tig0015544:+3859 Msa1356220:intergenic
GATGCTATAAATCATGGAAG+AGG 0.563923 tig0015544:-6119 Msa1356220:CDS
GGTGGCAAGTATACTTGAGG+TGG 0.566837 tig0015544:+5792 Msa1356220:intergenic
TGGCAGAACACTAAGATTGG+TGG 0.568883 tig0015544:-5555 Msa1356220:CDS
AGCTAGGGAGGATACGATCA+AGG 0.572146 tig0015544:+3874 Msa1356220:intergenic
CAAGTGAATTGAAAGGTGGA+AGG 0.573973 tig0015544:+5976 Msa1356220:intergenic
AGCATGTGCCAACACTGTGT+TGG 0.585546 tig0015544:+5599 Msa1356220:intergenic
GATAGTAATACACAAAAGAA+GGG 0.595287 tig0015544:+3712 Msa1356220:intergenic
TGTTGCATAAGAAAATACAT+TGG 0.601508 tig0015544:+3939 Msa1356220:intergenic
AAGTGAATTGAAAGGTGGAA+GGG 0.615025 tig0015544:+5977 Msa1356220:intergenic
CTTCCAGCCCAACACAGTGT+TGG 0.616634 tig0015544:-5607 Msa1356220:CDS
TAGACAAAATCAAGCTAGGG+AGG 0.616936 tig0015544:+3862 Msa1356220:intergenic
GCAGAACACTAAGATTGGTG+GGG 0.618966 tig0015544:-5553 Msa1356220:CDS
AGTGAATTGAAAGGTGGAAG+GGG 0.620889 tig0015544:+5978 Msa1356220:intergenic
ATAATGCATCTAATTAAGCA+AGG 0.626292 tig0015544:+3908 Msa1356220:intergenic
CAGAACACTAAGATTGGTGG+GGG 0.628305 tig0015544:-5552 Msa1356220:CDS
GAGTGGAAACTAGCATCAAG+AGG 0.637802 tig0015544:+6250 Msa1356220:intergenic
GGTGGTGGATAAACAATAGG+TGG 0.638764 tig0015544:+5774 Msa1356220:intergenic
TTTGGAACAGGTGAATAAGG+TGG 0.645722 tig0015544:+5933 Msa1356220:intergenic
ATAGGTGGCAAGTATACTTG+AGG 0.650538 tig0015544:+5789 Msa1356220:intergenic
ATGCATGGTTTACCACACAA+AGG 0.652538 tig0015544:+6222 Msa1356220:intergenic
GTGGCAAGTATACTTGAGGT+GGG 0.653749 tig0015544:+5793 Msa1356220:intergenic
TGGCGGCGACATTGTAACAG+TGG 0.658796 tig0015544:+5869 Msa1356220:intergenic
CTCCATCAGCAAAATCTGTG+AGG 0.675876 tig0015544:-6376 Msa1356220:five_prime_UTR
CACCAGATAGCATATTGTGG+TGG 0.680993 tig0015544:+5732 Msa1356220:intergenic
ACCACACAAAGGGAAAAGAG+TGG 0.683572 tig0015544:+6233 Msa1356220:intergenic
ACACACCAGATAGCATATTG+TGG 0.683997 tig0015544:+5729 Msa1356220:intergenic
TGTGGTGCAAGTGAATTGAA+AGG 0.698579 tig0015544:+5969 Msa1356220:intergenic
GGTGCAAGTGAATTGAAAGG+TGG 0.701271 tig0015544:+5972 Msa1356220:intergenic
ACAATATGCTATCTGGTGTG+TGG 0.720976 tig0015544:-5727 Msa1356220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAATAAATTTATTTTTT+TGG - tig0015544:5286-5305 Msa1356220:intron 0.0%
!!! TTTAGTTTTTTATTTAAAAG+AGG + tig0015544:5879-5898 Msa1356220:intergenic 10.0%
!! TTTATCAGCAATTAAAAAAA+AGG + tig0015544:4912-4931 Msa1356220:intergenic 15.0%
!!! ATAAAGGAACTTTTTTTTTT+TGG - tig0015544:4946-4965 Msa1356220:intron 15.0%
!! TAATGATAAAATTATATGCA+TGG - tig0015544:5146-5165 Msa1356220:intron 15.0%
!! CTCAAAAAAACAAAAAAAAA+GGG + tig0015544:5702-5721 Msa1356220:intergenic 15.0%
!!! GTCTTTTTAATTTAAAACTA+TGG - tig0015544:5995-6014 Msa1356220:CDS 15.0%
!! TTAATTAGATGCATTATATT+TGG - tig0015544:6195-6214 Msa1356220:intron 15.0%
!! AAGAAACTCAAATATCAAAA+TGG - tig0015544:4029-4048 Msa1356220:CDS 20.0%
!!! TTCAACAAATTTTCATCATT+TGG - tig0015544:4053-4072 Msa1356220:intron 20.0%
!!! CATCACTAAATGATTATTTT+TGG + tig0015544:4871-4890 Msa1356220:intergenic 20.0%
!!! AAATTTTCTCATATGGATAA+AGG - tig0015544:4930-4949 Msa1356220:intron 20.0%
!!! TTTTTTTTTGGTACAACATA+TGG - tig0015544:4958-4977 Msa1356220:intron 20.0%
!!! TTGGACCATTTATTTTTATT+CGG + tig0015544:5546-5565 Msa1356220:intergenic 20.0%
!! CCTCAAAAAAACAAAAAAAA+AGG + tig0015544:5703-5722 Msa1356220:intergenic 20.0%
!!! CCTTTTTTTTTGTTTTTTTG+AGG - tig0015544:5700-5719 Msa1356220:CDS 20.0%
!!! GTTTTAAATTAAAAAGACGA+CGG + tig0015544:5993-6012 Msa1356220:intergenic 20.0%
!!! TATTTCTAAAATGAACCTTA+TGG - tig0015544:6271-6290 Msa1356220:CDS 20.0%
!! CATCTCTAAATATCAAATTA+TGG + tig0015544:6315-6334 Msa1356220:intergenic 20.0%
! CATATAATTATATGCATGCA+TGG + tig0015544:3893-3912 Msa1356220:intergenic 25.0%
! TCAGATTTAGATTCTTCATA+TGG - tig0015544:4080-4099 Msa1356220:intron 25.0%
! ACATAATCTGATGTAATCAT+AGG - tig0015544:4744-4763 Msa1356220:intron 25.0%
!! GCTGATAAAATTTTCTCATA+TGG - tig0015544:4923-4942 Msa1356220:intron 25.0%
!! AACCCTTAATGATATTTTAC+TGG - tig0015544:5021-5040 Msa1356220:intron 25.0%
! CACCAGTAAAATATCATTAA+GGG + tig0015544:5026-5045 Msa1356220:intergenic 25.0%
! ACACCAGTAAAATATCATTA+AGG + tig0015544:5027-5046 Msa1356220:intergenic 25.0%
!! TGATATTTTACTGGTGTATT+TGG - tig0015544:5030-5049 Msa1356220:intron 25.0%
! AAAATTATATGCATGGACTT+TGG - tig0015544:5153-5172 Msa1356220:intron 25.0%
! AGTTGATCTAATAATTACGA+TGG - tig0015544:5201-5220 Msa1356220:intron 25.0%
! ACTTAACTAACGGTTAAATA+AGG + tig0015544:5411-5430 Msa1356220:intergenic 25.0%
! ATGTGAAATGACTTAACTAA+CGG + tig0015544:5421-5440 Msa1356220:intergenic 25.0%
!!! ACCATTTATTTTTATTCGGA+CGG + tig0015544:5542-5561 Msa1356220:intergenic 25.0%
!! CAACAGATCATATTTAAGTT+TGG + tig0015544:5609-5628 Msa1356220:intergenic 25.0%
! TTGCTATAATACATAGCATT+CGG - tig0015544:6108-6127 Msa1356220:CDS 25.0%
! ATAAGAAAATACATTGGAAG+AGG + tig0015544:6155-6174 Msa1356220:intergenic 25.0%
! TGTTGCATAAGAAAATACAT+TGG + tig0015544:6161-6180 Msa1356220:intergenic 25.0%
! ATAATGCATCTAATTAAGCA+AGG + tig0015544:6192-6211 Msa1356220:intergenic 25.0%
! GATAGTAATACACAAAAGAA+GGG + tig0015544:6388-6407 Msa1356220:intergenic 25.0%
! TGATAGTAATACACAAAAGA+AGG + tig0015544:6389-6408 Msa1356220:intergenic 25.0%
! ACTTTAGTGTGTGTAACTTT+TGG - tig0015544:3945-3964 Msa1356220:three_prime_UTR 30.0%
TTTGCAGATGCTATAAATCA+TGG - tig0015544:3972-3991 Msa1356220:three_prime_UTR 30.0%
CTTATGCATTCAATAGCTAT+TGG - tig0015544:4522-4541 Msa1356220:intron 30.0%
TTGGTACAACATATGGATAA+AGG - tig0015544:4965-4984 Msa1356220:intron 30.0%
ATACTATATCCACACAACAA+AGG - tig0015544:5444-5463 Msa1356220:intron 30.0%
CCAAATGAAAAGAAATCAAG+TGG + tig0015544:5476-5495 Msa1356220:intergenic 30.0%
! CCACTTGATTTCTTTTCATT+TGG - tig0015544:5473-5492 Msa1356220:intron 30.0%
ATGCATTCTATGTAGTTACA+AGG + tig0015544:5967-5986 Msa1356220:intergenic 30.0%
AACTAGACAAAATCAAGCTA+GGG + tig0015544:6241-6260 Msa1356220:intergenic 30.0%
! TCTAAAATGAACCTTATGGT+TGG - tig0015544:6275-6294 Msa1356220:CDS 30.0%
TGAATATGAAACCAACCATA+AGG + tig0015544:6289-6308 Msa1356220:intergenic 30.0%
! CAACCTCTAATTTTGTGCAT+TGG - tig0015544:3758-3777 Msa1356220:three_prime_UTR 35.0%
ACACCAATGCACAAAATTAG+AGG + tig0015544:3764-3783 Msa1356220:intergenic 35.0%
! TGGTGTTAATCCAATTCCAA+TGG - tig0015544:3778-3797 Msa1356220:three_prime_UTR 35.0%
CTTGATGAATCCATTGGAAT+TGG + tig0015544:3791-3810 Msa1356220:intergenic 35.0%
TAAGCTCTTGATGAATCCAT+TGG + tig0015544:3797-3816 Msa1356220:intergenic 35.0%
GATGAGCAATGTTGAATCTA+AGG + tig0015544:3823-3842 Msa1356220:intergenic 35.0%
GATGCTATAAATCATGGAAG+AGG - tig0015544:3978-3997 Msa1356220:three_prime_UTR 35.0%
GAGTTTCTTCCATGATTTGA+TGG + tig0015544:4018-4037 Msa1356220:intergenic 35.0%
AAGTGAATTGAAAGGTGGAA+GGG + tig0015544:4123-4142 Msa1356220:intergenic 35.0%
! GACATTGTAACAGTGGTTTT+AGG + tig0015544:4224-4243 Msa1356220:intergenic 35.0%
! TTTTTATGACTTGAAGGTGG+TGG + tig0015544:4344-4363 Msa1356220:intergenic 35.0%
ATTATAGGATCAGGAACTGT+AGG + tig0015544:4401-4420 Msa1356220:intergenic 35.0%
TCCTGATCCTATAATTCAAC+TGG - tig0015544:4406-4425 Msa1356220:intron 35.0%
TCCTATAATTCAACTGGCTA+TGG - tig0015544:4412-4431 Msa1356220:intron 35.0%
TCCATAGCCAGTTGAATTAT+AGG + tig0015544:4416-4435 Msa1356220:intergenic 35.0%
TGTAAATCAGTTCAGCCTAA+TGG - tig0015544:4461-4480 Msa1356220:intron 35.0%
GTAAATCAGTTCAGCCTAAT+GGG - tig0015544:4462-4481 Msa1356220:intron 35.0%
TATTGGCAGAACACTAAGAT+TGG - tig0015544:4539-4558 Msa1356220:intron 35.0%
! ACCATCTTTGTTTACCTTTG+TGG - tig0015544:4628-4647 Msa1356220:intron 35.0%
ACCACAAAGGTAAACAAAGA+TGG + tig0015544:4632-4651 Msa1356220:intergenic 35.0%
AGTCTGTGACTATATGTGTT+CGG - tig0015544:4671-4690 Msa1356220:intron 35.0%
TATGAGATTCTTACCGATGT+CGG + tig0015544:4719-4738 Msa1356220:intergenic 35.0%
TTTCACCATATAGTCACCTA+TGG + tig0015544:4841-4860 Msa1356220:intergenic 35.0%
!! CTTTTCATTTGGAATCCATC+CGG - tig0015544:5484-5503 Msa1356220:intron 35.0%
!! TTTTCATTTGGAATCCATCC+GGG - tig0015544:5485-5504 Msa1356220:intron 35.0%
AAAACCCGAATTCCTAACAT+CGG - tig0015544:5513-5532 Msa1356220:CDS 35.0%
GCCGTCCGAATAAAAATAAA+TGG - tig0015544:5538-5557 Msa1356220:CDS 35.0%
!!! TTTTGAGGTGCACATTTCAT+TGG - tig0015544:5715-5734 Msa1356220:CDS 35.0%
CCACATACACATATTCACAA+CGG - tig0015544:5786-5805 Msa1356220:CDS 35.0%
! ATCGAACAATGTAGGTTTTG+AGG + tig0015544:5908-5927 Msa1356220:intergenic 35.0%
GAATCTAGATCGAACAATGT+AGG + tig0015544:5916-5935 Msa1356220:intergenic 35.0%
TAACCTGCGAAATAAATCGT+GGG + tig0015544:6052-6071 Msa1356220:intergenic 35.0%
ATAACCTGCGAAATAAATCG+TGG + tig0015544:6053-6072 Msa1356220:intergenic 35.0%
! TGGAAGAGGTTTTCAATCTT+TGG + tig0015544:6141-6160 Msa1356220:intergenic 35.0%
GAACTAGACAAAATCAAGCT+AGG + tig0015544:6242-6261 Msa1356220:intergenic 35.0%
CTGATGGAGAGTAAGAGAAA+TGG + tig0015544:3710-3729 None:intergenic 40.0%
! ATCCTCACAGATTTTGCTGA+TGG + tig0015544:3726-3745 Msa1356220:intergenic 40.0%
TGCATGGTTTACCACACAAA+GGG + tig0015544:3877-3896 Msa1356220:intergenic 40.0%
ATGCATGGTTTACCACACAA+AGG + tig0015544:3878-3897 Msa1356220:intergenic 40.0%
GAAGCTACTCCATCAAATCA+TGG - tig0015544:4006-4025 Msa1356220:exon 40.0%
AGTGAATTGAAAGGTGGAAG+GGG + tig0015544:4122-4141 Msa1356220:intergenic 40.0%
CAAGTGAATTGAAAGGTGGA+AGG + tig0015544:4124-4143 Msa1356220:intergenic 40.0%
TGTGGTGCAAGTGAATTGAA+AGG + tig0015544:4131-4150 Msa1356220:intergenic 40.0%
! TTTGGAACAGGTGAATAAGG+TGG + tig0015544:4167-4186 Msa1356220:intergenic 40.0%
! AAAACATCATGAGGTGGGTT+TGG + tig0015544:4185-4204 Msa1356220:intergenic 40.0%
! ACCCACCTCATGATGTTTTT+AGG - tig0015544:4186-4205 Msa1356220:intron 40.0%
GCCTAAAAACATCATGAGGT+GGG + tig0015544:4190-4209 Msa1356220:intergenic 40.0%
!!! GTAACAGTGGTTTTAGGACT+TGG + tig0015544:4218-4237 Msa1356220:intergenic 40.0%
!!! GGCTTGGAACATGTTTTGAT+GGG + tig0015544:4265-4284 Msa1356220:intergenic 40.0%
!! ATAACACTTTTAGGTGGGCT+TGG + tig0015544:4281-4300 Msa1356220:intergenic 40.0%
!! AGCCCACCTAAAAGTGTTAT+AGG - tig0015544:4281-4300 Msa1356220:intron 40.0%
!! GGCCTATAACACTTTTAGGT+GGG + tig0015544:4286-4305 Msa1356220:intergenic 40.0%
ATAGGTGGCAAGTATACTTG+AGG + tig0015544:4311-4330 Msa1356220:intergenic 40.0%
! GGCTTTTTATGACTTGAAGG+TGG + tig0015544:4347-4366 Msa1356220:intergenic 40.0%
! GGTGGCTTTTTATGACTTGA+AGG + tig0015544:4350-4369 Msa1356220:intergenic 40.0%
ACACACCAGATAGCATATTG+TGG + tig0015544:4371-4390 Msa1356220:intergenic 40.0%
ACAATATGCTATCTGGTGTG+TGG - tig0015544:4370-4389 Msa1356220:intron 40.0%
GCCAGTTGAATTATAGGATC+AGG + tig0015544:4410-4429 Msa1356220:intergenic 40.0%
! GATGGTAGTGCAAACTTACT+TGG + tig0015544:4614-4633 Msa1356220:intergenic 40.0%
ACAAATGATGCACACCACAA+AGG + tig0015544:4645-4664 Msa1356220:intergenic 40.0%
ATATGTGTTCGGACACGATA+CGG - tig0015544:4682-4701 Msa1356220:intron 40.0%
AAAAAAGGGATCAGACATCC+TGG + tig0015544:5688-5707 Msa1356220:intergenic 40.0%
CCGTTGTGAATATGTGTATG+TGG + tig0015544:5789-5808 Msa1356220:intergenic 40.0%
AGGATTCACTTTCACGACAT+AGG + tig0015544:5947-5966 Msa1356220:intergenic 40.0%
CGAAATAAATCGTGGGTTTG+AGG + tig0015544:6045-6064 Msa1356220:intergenic 40.0%
AAACCCACGATTTATTTCGC+AGG - tig0015544:6046-6065 Msa1356220:CDS 40.0%
TAGACAAAATCAAGCTAGGG+AGG + tig0015544:6238-6257 Msa1356220:intergenic 40.0%
CTCCATCAGCAAAATCTGTG+AGG - tig0015544:3721-3740 Msa1356220:three_prime_UTR 45.0%
GAGTGGAAACTAGCATCAAG+AGG + tig0015544:3850-3869 Msa1356220:intergenic 45.0%
! TCCACTCTTTTCCCTTTGTG+TGG - tig0015544:3863-3882 Msa1356220:three_prime_UTR 45.0%
ACCACACAAAGGGAAAAGAG+TGG + tig0015544:3867-3886 Msa1356220:intergenic 45.0%
GGTGCAAGTGAATTGAAAGG+TGG + tig0015544:4128-4147 Msa1356220:intergenic 45.0%
GAATAAGGTGGTAGAGAGGT+AGG + tig0015544:4155-4174 Msa1356220:intergenic 45.0%
AGGTGAATAAGGTGGTAGAG+AGG + tig0015544:4159-4178 Msa1356220:intergenic 45.0%
! GGGTTTGGAACAGGTGAATA+AGG + tig0015544:4170-4189 Msa1356220:intergenic 45.0%
GGCCTAAAAACATCATGAGG+TGG + tig0015544:4191-4210 Msa1356220:intergenic 45.0%
GGTGGCCTAAAAACATCATG+AGG + tig0015544:4194-4213 Msa1356220:intergenic 45.0%
!!! ACAGTGGTTTTAGGACTTGG+TGG + tig0015544:4215-4234 Msa1356220:intergenic 45.0%
!!! ACATGTTTTGATGGGCTTGG+AGG + tig0015544:4257-4276 Msa1356220:intergenic 45.0%
!!! GGAACATGTTTTGATGGGCT+TGG + tig0015544:4260-4279 Msa1356220:intergenic 45.0%
!! GGGCTTGGAACATGTTTTGA+TGG + tig0015544:4266-4285 Msa1356220:intergenic 45.0%
! GGGCCTATAACACTTTTAGG+TGG + tig0015544:4287-4306 Msa1356220:intergenic 45.0%
! GGTGGGCCTATAACACTTTT+AGG + tig0015544:4290-4309 Msa1356220:intergenic 45.0%
GTGGCAAGTATACTTGAGGT+GGG + tig0015544:4307-4326 Msa1356220:intergenic 45.0%
!! GGTGGTGGATAAACAATAGG+TGG + tig0015544:4326-4345 Msa1356220:intergenic 45.0%
!! GGTGGTGGTGGATAAACAAT+AGG + tig0015544:4329-4348 Msa1356220:intergenic 45.0%
! TTATGACTTGAAGGTGGTGG+TGG + tig0015544:4341-4360 Msa1356220:intergenic 45.0%
AGCCACCACAATATGCTATC+TGG - tig0015544:4363-4382 Msa1356220:intron 45.0%
CACCAGATAGCATATTGTGG+TGG + tig0015544:4368-4387 Msa1356220:intergenic 45.0%
! TGGCTATGGACTATGCTTGT+GGG - tig0015544:4426-4445 Msa1356220:intron 45.0%
TGGCAGAACACTAAGATTGG+TGG - tig0015544:4542-4561 Msa1356220:intron 45.0%
GGCAGAACACTAAGATTGGT+GGG - tig0015544:4543-4562 Msa1356220:intron 45.0%
GCAGAACACTAAGATTGGTG+GGG - tig0015544:4544-4563 Msa1356220:intron 45.0%
CAGAACACTAAGATTGGTGG+GGG - tig0015544:4545-4564 Msa1356220:intron 45.0%
! TCCTTGGATTAGGTGTGTTC+CGG + tig0015544:4807-4826 Msa1356220:intergenic 45.0%
GCACAAACACTCCTTGGATT+AGG + tig0015544:4817-4836 Msa1356220:intergenic 45.0%
TATGGAGCACAAACACTCCT+TGG + tig0015544:4823-4842 Msa1356220:intergenic 45.0%
!! AAGGAGTGTTTGTGCTCCAT+AGG - tig0015544:4822-4841 Msa1356220:intron 45.0%
GTGCTCCATAGGTGACTATA+TGG - tig0015544:4833-4852 Msa1356220:intron 45.0%
! TGGCATATGCCTTTGTTGTG+TGG + tig0015544:5456-5475 Msa1356220:intergenic 45.0%
!! GAATTCGGGTTTTCTCTACC+CGG + tig0015544:5506-5525 Msa1356220:intergenic 45.0%
GCTACCGATGTTAGGAATTC+GGG + tig0015544:5520-5539 Msa1356220:intergenic 45.0%
GGCTACCGATGTTAGGAATT+CGG + tig0015544:5521-5540 Msa1356220:intergenic 45.0%
ATCAGACATCCTGGTACTCA+GGG + tig0015544:5679-5698 Msa1356220:intergenic 45.0%
CATTTCATTGGCACACCTTG+TGG - tig0015544:5727-5746 Msa1356220:CDS 45.0%
CGCGTGAATCTAATACCACA+AGG + tig0015544:5745-5764 Msa1356220:intergenic 45.0%
!! TTCACAACGGCGTTGACTAA+TGG - tig0015544:5799-5818 Msa1356220:CDS 45.0%
!!! TATTTTATTATAATATTTAG+TGG + tig0015544:5244-5263 Msa1356220:intergenic 5.0%
!!! AATAAAATAATTTATTCTTT+TGG - tig0015544:5255-5274 Msa1356220:intron 5.0%
!! AATTAAAATATATATTTGTT+TGG + tig0015544:5565-5584 Msa1356220:intergenic 5.0%
! TCATGAGGTGGGTTTGGAAC+AGG + tig0015544:4179-4198 Msa1356220:intergenic 50.0%
!!! GTGGTTTTAGGACTTGGTGG+TGG + tig0015544:4212-4231 Msa1356220:intergenic 50.0%
!!! TGTTTTGATGGGCTTGGAGG+TGG + tig0015544:4254-4273 Msa1356220:intergenic 50.0%
GGTGGCAAGTATACTTGAGG+TGG + tig0015544:4308-4327 Msa1356220:intergenic 50.0%
! CTGGCTATGGACTATGCTTG+TGG - tig0015544:4425-4444 Msa1356220:intron 50.0%
! ATGGACTATGCTTGTGGGTC+TGG - tig0015544:4431-4450 Msa1356220:intron 50.0%
TGGACTATGCTTGTGGGTCT+GGG - tig0015544:4432-4451 Msa1356220:intron 50.0%
! GGCTGGAAGCATATCCCATT+AGG + tig0015544:4479-4498 Msa1356220:intergenic 50.0%
GCATGTGCCAACACTGTGTT+GGG + tig0015544:4500-4519 Msa1356220:intergenic 50.0%
AGCATGTGCCAACACTGTGT+TGG + tig0015544:4501-4520 Msa1356220:intergenic 50.0%
GATTAGGTGTGTTCCGGTGT+CGG + tig0015544:4801-4820 Msa1356220:intergenic 50.0%
ACCGGAACACACCTAATCCA+AGG - tig0015544:4803-4822 Msa1356220:intron 50.0%
GATCAGACATCCTGGTACTC+AGG + tig0015544:5680-5699 Msa1356220:intergenic 50.0%
AGCTAGGGAGGATACGATCA+AGG + tig0015544:6226-6245 Msa1356220:intergenic 50.0%
GGTGGAAGGGGTTGAGAAGA+AGG + tig0015544:4110-4129 Msa1356220:intergenic 55.0%
GGTGGTAGAGAGGTAGGTTG+TGG + tig0015544:4149-4168 Msa1356220:intergenic 55.0%
TGGCGGCGACATTGTAACAG+TGG + tig0015544:4231-4250 Msa1356220:intergenic 55.0%
!! TTTGATGGGCTTGGAGGTGG+TGG + tig0015544:4251-4270 Msa1356220:intergenic 55.0%
GGACTATGCTTGTGGGTCTG+GGG - tig0015544:4433-4452 Msa1356220:intron 55.0%
CTTCCAGCCCAACACAGTGT+TGG - tig0015544:4490-4509 Msa1356220:intron 55.0%
!!! GGTGGGGGCACTTGTGATTT+TGG - tig0015544:4560-4579 Msa1356220:intron 55.0%
!!! GGGGGCACTTGTGATTTTGG+TGG - tig0015544:4563-4582 Msa1356220:intron 55.0%
! TCGGGTTTTCTCTACCCGGA+TGG + tig0015544:5502-5521 Msa1356220:intergenic 55.0%
TTCGGACGGCTACCGATGTT+AGG + tig0015544:5528-5547 Msa1356220:intergenic 55.0%
TGTGTGCTTCCCTGAGTACC+AGG - tig0015544:5667-5686 Msa1356220:CDS 55.0%
GTGCCAACACTGTGTTGGGC+TGG + tig0015544:4496-4515 Msa1356220:intergenic 60.0%
GGACACTGACACGCCGACAT+CGG - tig0015544:4703-4722 Msa1356220:intron 60.0%
!! CACTGACTCGTGTCCGACAC+CGG - tig0015544:4785-4804 Msa1356220:intron 60.0%
! GATGGGCTTGGAGGTGGTGG+CGG + tig0015544:4248-4267 Msa1356220:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0015544 gene 3695 6424 3695 ID=Msa1356220;Name=Msa1356220
tig0015544 mRNA 3695 6424 3695 ID=Msa1356220-mRNA-1;Parent=Msa1356220;Name=Msa1356220-mRNA-1;_AED=0.03;_eAED=0.03;_QI=57|1|1|1|0.5|0.66|3|325|266
tig0015544 exon 3695 4051 3695 ID=Msa1356220-mRNA-1:exon:9793;Parent=Msa1356220-mRNA-1
tig0015544 exon 5505 6140 5505 ID=Msa1356220-mRNA-1:exon:9792;Parent=Msa1356220-mRNA-1
tig0015544 exon 6235 6424 6235 ID=Msa1356220-mRNA-1:exon:9791;Parent=Msa1356220-mRNA-1
tig0015544 five_prime_UTR 6368 6424 6368 ID=Msa1356220-mRNA-1:five_prime_utr;Parent=Msa1356220-mRNA-1
tig0015544 CDS 6235 6367 6235 ID=Msa1356220-mRNA-1:cds;Parent=Msa1356220-mRNA-1
tig0015544 CDS 5505 6140 5505 ID=Msa1356220-mRNA-1:cds;Parent=Msa1356220-mRNA-1
tig0015544 CDS 4020 4051 4020 ID=Msa1356220-mRNA-1:cds;Parent=Msa1356220-mRNA-1
tig0015544 three_prime_UTR 3695 4019 3695 ID=Msa1356220-mRNA-1:three_prime_utr;Parent=Msa1356220-mRNA-1
Gene Sequence

>Msa1356220

ATGTTTCAACCTCTAATTTTGTGCATTGGTGTTAATCCAATTCCAATGGATTCATCAAGAGCTTACATCCTTAGATTCAACATTGCTCATCTTTGCCTCTTGATGCTAGTTTCCACTCTTTTCCCTTTGTGTGATGCTATAAATCATGGAAGAGGTAGTAGAAGCTACTCCATCAAATCATGGAAGAAACTCAAATATCAAAATGGTTTCAACAAATTTTCATCATTTGGCTACTCAGATTTAGATTCTTCATATGGTTCTCCTTCTTCTCAACCCCTTCCACCTTTCAATTCACTTGCACCACAACCTACCTCTCTACCACCTTATTCACCTGTTCCAAACCCACCTCATGATGTTTTTAGGCCACCACCAAGTCCTAAAACCACTGTTACAATGTCGCCGCCACCACCTCCAAGCCCATCAAAACATGTTCCAAGCCCACCTAAAAGTGTTATAGGCCCACCTCAAGTATACTTGCCACCTATTGTTTATCCACCACCACCTTCAAGTCATAAAAAGCCACCACAATATGCTATCTGGTGTGTGGCAAAGCCTACAGTTCCTGATCCTATAATTCAACTGGCTATGGACTATGCTTGTGGGTCTGGGGCTGACTGTAAATCAGTTCAGCCTAATGGGATATGCTTCCAGCCCAACACAGTGTTGGCACATGCTTCTTATGCATTCAATAGCTATTGGCAGAACACTAAGATTGGTGGGGGCACTTGTGATTTTGGTGGCACTGCTATGCTTGTCACTGTTGATCCAAGTTATGACAAGTGCATCTTCAAGTCGACTTAG
Protein sequence

>Msa1356220

MFQPLILCIGVNPIPMDSSRAYILRFNIAHLCLLMLVSTLFPLCDAINHGRGSRSYSIKSWKKLKYQNGFNKFSSFGYSDLDSSYGSPSSQPLPPFNSLAPQPTSLPPYSPVPNPPHDVFRPPPSPKTTVTMSPPPPPSPSKHVPSPPKSVIGPPQVYLPPIVYPPPPSSHKKPPQYAIWCVAKPTVPDPIIQLAMDYACGSGADCKSVQPNGICFQPNTVLAHASYAFNSYWQNTKIGGGTCDFGGTAMLVTVDPSYDKCIFKST*