AlfalfaGEDB | Msa1034960

M. sativa cultivar zhongmu-4 / Msa1034960

KEGG: -
GO: GO:0000003 GO:0000278 GO:0000280 GO:0000902 GO:0000904 GO:0002831 GO:0002833 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007088 GO:0007113 GO:0007127 GO:0007135 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009553 GO:0009561 GO:0009628 GO:0009653 GO:0009791 GO:0009888 GO:0009892 GO:0009960 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010154 GO:0010224 GO:0010564 GO:0010605 GO:0016043 GO:0019222 GO:0022402 GO:0022414 GO:0030154 GO:0031323 GO:0031324 GO:0031347 GO:0031349 GO:0031396 GO:0031397 GO:0031399 GO:0031400 GO:0032101 GO:0032103 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032989 GO:0033043 GO:0034641 GO:0034645 GO:0040020 GO:0042023 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044092 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0046483 GO:0048229 GO:0048285 GO:0048316 GO:0048468 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051321 GO:0051338 GO:0051348 GO:0051438 GO:0051444 GO:0051445 GO:0051726 GO:0051783 GO:0060255 GO:0061458 GO:0061982 GO:0061983 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0090558 GO:0090626 GO:0140013 GO:1900424 GO:1900426 GO:1901360 GO:1901576 GO:1903046 GO:1903320 GO:1903321 GO:1904666 GO:1904667 GO:2000241
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1034960	XP_003625202.1	95.816	239	9	1	1	239	1	238	1.03e-152	434

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1034960	sp\|O48533\|PYM_ARATH	48.333	180	81	6	64	239	88	259	1.70e-37	135

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1034960	G7KUG0	95.816	239	9	1	1	239	1	238	4.92e-153	434

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006840	Msa1034960	0.851665	7.653673e-61	-8.615850e-47
Msa0015570	Msa1034960	0.839462	1.562052e-57	-8.615850e-47
Msa0018920	Msa1034960	0.832775	7.795700e-56	-8.615850e-47
Msa0030070	Msa1034960	0.867902	9.716154e-66	-8.615850e-47
Msa0040640	Msa1034960	0.828859	7.114176e-55	-8.615850e-47
Msa0045620	Msa1034960	0.802090	6.617028e-49	-8.615850e-47
Msa0050530	Msa1034960	0.834775	2.465916e-56	-8.615850e-47
Msa0063190	Msa1034960	0.801198	1.008466e-48	-8.615850e-47
Msa0069350	Msa1034960	0.800154	1.646065e-48	-8.615850e-47
Msa0091350	Msa1034960	0.827333	1.657392e-54	-8.615850e-47
Msa0094180	Msa1034960	0.800037	1.739164e-48	-8.615850e-47
Msa0100600	Msa1034960	0.822214	2.670390e-53	-8.615850e-47
Msa0100890	Msa1034960	0.828303	9.690640e-55	-8.615850e-47
Msa0109730	Msa1034960	0.847998	8.108603e-60	-8.615850e-47
Msa0112670	Msa1034960	0.808731	2.681701e-50	-8.615850e-47
Msa0113410	Msa1034960	0.801726	7.860555e-49	-8.615850e-47
Msa0607330	Msa1034960	0.812364	4.401076e-51	-8.615850e-47
Msa0608350	Msa1034960	0.828218	1.015863e-54	-8.615850e-47
Msa0612520	Msa1034960	0.846933	1.591124e-59	-8.615850e-47
Msa0625620	Msa1034960	0.813828	2.100663e-51	-8.615850e-47
Msa0640800	Msa1034960	0.820435	6.868385e-53	-8.615850e-47
Msa0647440	Msa1034960	0.829671	4.519320e-55	-8.615850e-47
Msa0648760	Msa1034960	0.836473	9.169107e-57	-8.615850e-47
Msa0653160	Msa1034960	0.853246	2.712295e-61	-8.615850e-47
Msa0657210	Msa1034960	0.839239	1.784253e-57	-8.615850e-47
Msa0660260	Msa1034960	0.842958	1.881270e-58	-8.615850e-47
Msa0663290	Msa1034960	0.865708	4.854043e-65	-8.615850e-47
Msa0664070	Msa1034960	0.860377	2.155175e-63	-8.615850e-47
Msa0677250	Msa1034960	-0.800602	1.334338e-48	-8.615850e-47
Msa0688620	Msa1034960	0.876839	1.014763e-68	-8.615850e-47
Msa0690320	Msa1034960	0.847921	8.515517e-60	-8.615850e-47
Msa0691270	Msa1034960	0.831769	1.383087e-55	-8.615850e-47
Msa0695560	Msa1034960	0.861760	8.178390e-64	-8.615850e-47
Msa0701250	Msa1034960	0.854849	9.356627e-62	-8.615850e-47
Msa0708020	Msa1034960	0.818670	1.736150e-52	-8.615850e-47
Msa0708980	Msa1034960	0.816192	6.276430e-52	-8.615850e-47
Msa0717900	Msa1034960	0.807556	4.770973e-50	-8.615850e-47
Msa0720280	Msa1034960	0.806142	9.496836e-50	-8.615850e-47
Msa0749190	Msa1034960	0.867573	1.238748e-65	-8.615850e-47
Msa0750520	Msa1034960	0.872856	2.304880e-67	-8.615850e-47
Msa0751720	Msa1034960	0.813009	3.179160e-51	-8.615850e-47
Msa0803140	Msa1034960	0.810521	1.106300e-50	-8.615850e-47
Msa0816080	Msa1034960	0.807172	5.754056e-50	-8.615850e-47
Msa0817360	Msa1034960	0.800885	1.168512e-48	-8.615850e-47
Msa0822510	Msa1034960	0.828481	8.779456e-55	-8.615850e-47
Msa0831820	Msa1034960	0.870189	1.761518e-66	-8.615850e-47
Msa0841500	Msa1034960	0.830247	3.269518e-55	-8.615850e-47
Msa0125590	Msa1034960	0.856281	3.576807e-62	-8.615850e-47
Msa0127340	Msa1034960	0.824606	7.368506e-54	-8.615850e-47
Msa0137010	Msa1034960	-0.801701	7.953365e-49	-8.615850e-47
Msa0153210	Msa1034960	0.805779	1.132272e-49	-8.615850e-47
Msa0156050	Msa1034960	0.840475	8.504942e-58	-8.615850e-47
Msa0156090	Msa1034960	0.836493	9.059580e-57	-8.615850e-47
Msa0168380	Msa1034960	0.815710	8.039786e-52	-8.615850e-47
Msa0170070	Msa1034960	0.828094	1.088395e-54	-8.615850e-47
Msa0173380	Msa1034960	0.816168	6.356454e-52	-8.615850e-47
Msa0184700	Msa1034960	0.836909	7.099562e-57	-8.615850e-47
Msa0186180	Msa1034960	0.804822	1.795862e-49	-8.615850e-47
Msa0204970	Msa1034960	0.814316	1.639529e-51	-8.615850e-47
Msa0221180	Msa1034960	0.801982	6.962131e-49	-8.615850e-47
Msa0223040	Msa1034960	0.800297	1.539572e-48	-8.615850e-47
Msa0225800	Msa1034960	0.826151	3.175656e-54	-8.615850e-47
Msa0373170	Msa1034960	0.832502	9.115555e-56	-8.615850e-47
Msa0412130	Msa1034960	0.843175	1.646943e-58	-8.615850e-47
Msa0420430	Msa1034960	0.817625	2.992843e-52	-8.615850e-47
Msa0420680	Msa1034960	0.840411	8.839439e-58	-8.615850e-47
Msa0421750	Msa1034960	0.823176	1.594889e-53	-8.615850e-47
Msa0434360	Msa1034960	0.811501	6.784123e-51	-8.615850e-47
Msa0461550	Msa1034960	0.835857	1.314167e-56	-8.615850e-47
Msa0466520	Msa1034960	0.826791	2.235152e-54	-8.615850e-47
Msa0467690	Msa1034960	0.828712	7.718400e-55	-8.615850e-47
Msa0478140	Msa1034960	0.803883	2.818784e-49	-8.615850e-47
Msa0478200	Msa1034960	0.808484	3.027153e-50	-8.615850e-47
Msa0999950	Msa1034960	0.830876	2.293745e-55	-8.615850e-47
Msa1000970	Msa1034960	0.806718	7.180547e-50	-8.615850e-47
Msa1008670	Msa1034960	0.812366	4.396413e-51	-8.615850e-47
Msa1008850	Msa1034960	0.800853	1.185761e-48	-8.615850e-47
Msa1033420	Msa1034960	0.834896	2.298835e-56	-8.615850e-47
Msa1034960	Msa1042300	0.813838	2.089819e-51	-8.615850e-47
Msa1034960	Msa1060900	0.804406	2.194099e-49	-8.615850e-47
Msa1034960	Msa1071410	0.877318	6.917701e-69	-8.615850e-47
Msa1034960	Msa1073060	0.828867	7.079724e-55	-8.615850e-47
Msa1034960	Msa1075020	0.915310	6.851684e-85	-8.615850e-47
Msa1034960	Msa1078860	0.805842	1.098187e-49	-8.615850e-47
Msa1034960	Msa1082640	-0.808598	2.862547e-50	-8.615850e-47
Msa1034960	Msa1106220	0.841256	5.305156e-58	-8.615850e-47
Msa1034960	Msa1115860	0.837184	6.038346e-57	-8.615850e-47
Msa1034960	Msa1130780	0.835307	1.811047e-56	-8.615850e-47
Msa1034960	Msa1131150	0.819063	1.413493e-52	-8.615850e-47
Msa1034960	Msa1144990	0.846043	2.783386e-59	-8.615850e-47
Msa1034960	Msa1154630	0.830273	3.223058e-55	-8.615850e-47
Msa1034960	Msa1160780	0.816771	4.657332e-52	-8.615850e-47
Msa1034960	Msa1162360	0.878078	3.754864e-69	-8.615850e-47
Msa1034960	Msa1169170	0.805332	1.405030e-49	-8.615850e-47
Msa1034960	Msa1183910	0.801859	7.380430e-49	-8.615850e-47
Msa1034960	Msa1191000	0.810078	1.378351e-50	-8.615850e-47
Msa1034960	Msa1202220	-0.805496	1.298088e-49	-8.615850e-47
Msa1034960	Msa1206040	0.828372	9.323670e-55	-8.615850e-47
Msa1034960	Msa1219770	0.825836	3.772468e-54	-8.615850e-47
Msa1034960	Msa1254420	0.815307	9.886845e-52	-8.615850e-47
Msa1034960	Msa1266690	0.848099	7.604249e-60	-8.615850e-47
Msa1034960	Msa1267930	0.854715	1.023439e-61	-8.615850e-47
Msa1034960	Msa1287100	-0.800168	1.635708e-48	-8.615850e-47
Msa1034960	Msa1294280	0.803481	3.414769e-49	-8.615850e-47
Msa1034960	Msa1294460	0.812870	3.410891e-51	-8.615850e-47
Msa1034960	Msa1294790	0.820555	6.448437e-53	-8.615850e-47
Msa1034960	Msa1297070	0.842007	3.363351e-58	-8.615850e-47
Msa1034960	Msa1308850	0.808923	2.439288e-50	-8.615850e-47
Msa1034960	Msa1328870	0.821507	3.892770e-53	-8.615850e-47
Msa1034960	Msa1333360	0.850428	1.708980e-60	-8.615850e-47
Msa1034960	Msa1341750	0.830150	3.453963e-55	-8.615850e-47
Msa1034960	Msa1342810	0.810543	1.094223e-50	-8.615850e-47
Msa1034960	Msa1349850	-0.807619	4.627359e-50	-8.615850e-47
Msa1034960	Msa1356220	0.815012	1.149768e-51	-8.615850e-47
Msa1034960	Msa1356450	0.827732	1.330009e-54	-8.615850e-47
Msa1034960	Msa1362590	0.818423	1.975719e-52	-8.615850e-47
Msa1034960	Msa1371800	0.806429	8.260011e-50	-8.615850e-47
Msa1034960	Msa1372030	0.891510	3.718105e-74	-8.615850e-47
Msa1034960	Msa1381800	0.874485	6.509470e-68	-8.615850e-47
Msa1034960	Msa1389820	0.829327	5.476067e-55	-8.615850e-47
Msa1034960	Msa1406720	0.821206	4.566242e-53	-8.615850e-47
Msa1034960	Msa1417930	0.831763	1.388044e-55	-8.615850e-47
Msa1034960	Msa1424370	0.811008	8.677357e-51	-8.615850e-47
Msa1034960	Msa1427600	-0.807469	4.978633e-50	-8.615850e-47
Msa1034960	Msa1457840	0.816196	6.265181e-52	-8.615850e-47
Msa0238960	Msa1034960	-0.825005	5.932411e-54	-8.615850e-47
Msa0249870	Msa1034960	0.810692	1.015772e-50	-8.615850e-47
Msa0260630	Msa1034960	0.828382	9.272771e-55	-8.615850e-47
Msa0264230	Msa1034960	0.802671	5.023549e-49	-8.615850e-47
Msa0276800	Msa1034960	-0.841176	5.569982e-58	-8.615850e-47
Msa0281540	Msa1034960	0.845791	3.257805e-59	-8.615850e-47
Msa0288400	Msa1034960	0.816935	4.277767e-52	-8.615850e-47
Msa0291320	Msa1034960	0.817358	3.438098e-52	-8.615850e-47
Msa0316720	Msa1034960	-0.849584	2.944227e-60	-8.615850e-47
Msa0320580	Msa1034960	0.844160	8.976230e-59	-8.615850e-47
Msa0336430	Msa1034960	0.822168	2.736217e-53	-8.615850e-47
Msa0336460	Msa1034960	0.810747	9.883835e-51	-8.615850e-47
Msa0336520	Msa1034960	0.834772	2.471062e-56	-8.615850e-47
Msa0342220	Msa1034960	0.823390	1.421594e-53	-8.615850e-47
Msa0344110	Msa1034960	0.846922	1.602178e-59	-8.615850e-47
Msa0507810	Msa1034960	0.862368	5.325769e-64	-8.615850e-47
Msa0507820	Msa1034960	0.861278	1.147724e-63	-8.615850e-47
Msa0507920	Msa1034960	0.855567	5.787224e-62	-8.615850e-47
Msa0512520	Msa1034960	0.833526	5.068736e-56	-8.615850e-47
Msa0513080	Msa1034960	0.811503	6.777471e-51	-8.615850e-47
Msa0514020	Msa1034960	0.824398	8.250190e-54	-8.615850e-47
Msa0527850	Msa1034960	0.851844	6.809981e-61	-8.615850e-47
Msa0541740	Msa1034960	0.856248	3.658105e-62	-8.615850e-47
Msa0544410	Msa1034960	0.830384	3.027977e-55	-8.615850e-47
Msa0553210	Msa1034960	0.814978	1.169544e-51	-8.615850e-47
Msa0554300	Msa1034960	0.840538	8.185846e-58	-8.615850e-47
Msa0557850	Msa1034960	0.862745	4.077680e-64	-8.615850e-47
Msa0564980	Msa1034960	0.837274	5.726233e-57	-8.615850e-47
Msa0568710	Msa1034960	0.866744	2.279481e-65	-8.615850e-47
Msa0571350	Msa1034960	0.825393	4.804697e-54	-8.615850e-47
Msa0572830	Msa1034960	0.805501	1.294741e-49	-8.615850e-47
Msa0574660	Msa1034960	0.808480	3.033926e-50	-8.615850e-47
Msa0575710	Msa1034960	0.847918	8.533645e-60	-8.615850e-47
Msa0582460	Msa1034960	0.862999	3.403888e-64	-8.615850e-47
Msa0586200	Msa1034960	0.860739	1.674455e-63	-8.615850e-47
Msa0598470	Msa1034960	-0.805214	1.486895e-49	-8.615850e-47
Msa0866510	Msa1034960	-0.800946	1.135414e-48	-8.615850e-47
Msa0876630	Msa1034960	0.856020	4.266898e-62	-8.615850e-47
Msa0900090	Msa1034960	0.813923	2.001864e-51	-8.615850e-47
Msa0929900	Msa1034960	0.814920	1.205011e-51	-8.615850e-47
Msa0930950	Msa1034960	-0.802716	4.915870e-49	-8.615850e-47
Msa0965470	Msa1034960	0.844272	8.375418e-59	-8.615850e-47
Msa0966710	Msa1034960	0.805832	1.103382e-49	-8.615850e-47
Msa0978980	Msa1034960	0.869182	3.749881e-66	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1034960	MtrunA17_Chr7g0258191	95.816	239	9	1	1	239	1	238	9.47e-157	434

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1034960	AT2G42260.2	48.333	180	81	6	64	239	88	259	1.73e-38	135
Msa1034960	AT2G42260.1	48.333	180	81	6	64	239	88	259	1.73e-38	135
Msa1034960	AT3G57860.1	40.625	256	122	10	1	239	1	243	2.26e-38	134

Find 91 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCATCTTCTGATGATTTAT+AGG	0.216006	7_1:+70689880	Msa1034960:three_prime_UTR
TCATCTTCTGATGATTTATA+GGG	0.272386	7_1:+70689881	Msa1034960:three_prime_UTR
TTCAGCTTGATGCAGGATTT+TGG	0.284785	7_1:-70689540	None:intergenic
GGAGATGAAGAAGACCTATT+TGG	0.288155	7_1:-70687977	None:intergenic
TTGATTAAGAGAAAAGAAAT+AGG	0.317101	7_1:-70690089	None:intergenic
TTTCTCTTAATCAAATTGTT+TGG	0.327945	7_1:+70690098	Msa1034960:three_prime_UTR
GCTTCATTCTCTGCTGCTAC+TGG	0.357062	7_1:+70689489	Msa1034960:CDS
TGAGGTTCGTTAGTGTGGTT+AGG	0.363912	7_1:-70688041	None:intergenic
AGGAGATATCTTAGAGCAAA+TGG	0.372197	7_1:+70689833	Msa1034960:three_prime_UTR
ATCAAGCTGAAAACACCTTA+TGG	0.387510	7_1:+70689552	Msa1034960:CDS
ACGCGGCGGTCTCGTGCTTC+CGG	0.391950	7_1:-70688168	None:intergenic
TGAGAGAAGGAGGGAGAGAC+AGG	0.393153	7_1:+70689398	Msa1034960:CDS
AAGTAGAAGATTACACAAAC+TGG	0.401114	7_1:-70689939	None:intergenic
AGCAAATGGGAAAGGAGATT+CGG	0.404682	7_1:+70689847	Msa1034960:three_prime_UTR
TTTGGAACTTTACTTCCATA+AGG	0.419855	7_1:-70689567	None:intergenic
TTTAGGCGATTGAGAGAAGG+AGG	0.446441	7_1:+70689388	Msa1034960:intron
TGCGCGTCGTTCTCCAGGTT+CGG	0.449151	7_1:+70688347	Msa1034960:CDS
ATATCCTGCAACGGCGTCCT+CGG	0.451746	7_1:-70688450	None:intergenic
GTACCCGAGGACGCCGTTGC+AGG	0.452614	7_1:+70688446	Msa1034960:CDS
CGATCTGAACCGGCAGTGAA+TGG	0.453141	7_1:-70688282	None:intergenic
GCAAATGGGAAAGGAGATTC+GGG	0.454912	7_1:+70689848	Msa1034960:three_prime_UTR
ACTGAGGAAATTGAGCAAAC+TGG	0.455510	7_1:+70689423	Msa1034960:CDS
ACGAGCAACTTCGCGACGTA+CGG	0.459911	7_1:-70688325	None:intergenic
GGGTTTGAATAGAATGAAGT+AGG	0.460822	7_1:-70688080	None:intergenic
GCAGTGAATGGAGCGGGTGC+AGG	0.465831	7_1:-70688270	None:intergenic
TTCACGCTCAATTATATCAA+TGG	0.466579	7_1:-70689673	None:intergenic
AGTGAAGAACCGATCTGAAC+CGG	0.469073	7_1:-70688292	None:intergenic
CCACGGCGAGTGGTGGTTGG+AGG	0.472234	7_1:-70688378	None:intergenic
TCTTGAATCACGGCGGAGAA+AGG	0.474672	7_1:-70688225	None:intergenic
GAGGTTCGTTAGTGTGGTTA+GGG	0.474844	7_1:-70688040	None:intergenic
ATCGAAGGGTAGCATAGGAT+TGG	0.475974	7_1:-70687999	None:intergenic
ATCTTCTTCAATTCACCTCA+TGG	0.478558	7_1:-70689778	None:intergenic
GAGTGAGAAACTAGAGAATG+AGG	0.484691	7_1:-70688114	None:intergenic
GTGTTTAGGCGATTGAGAGA+AGG	0.495099	7_1:+70689385	Msa1034960:intron
CAGAACATCAGAAAAGGGTT+AGG	0.496050	7_1:+70689745	Msa1034960:CDS
CTTCCACGGCGAGTGGTGGT+TGG	0.501586	7_1:-70688381	None:intergenic
AAACTTCCTGCTGCTGAAGA+TGG	0.501739	7_1:+70689609	Msa1034960:CDS
GATTCACCATCTTCAGCAGC+AGG	0.505435	7_1:-70689615	None:intergenic
TATCCTGCAACGGCGTCCTC+GGG	0.507871	7_1:-70688449	None:intergenic
TTCAGCTGGTTAGCATGAAC+TGG	0.509893	7_1:-70689450	None:intergenic
TCTTCTTCCACGGCGAGTGG+TGG	0.510955	7_1:-70688385	None:intergenic
AACGGCGAAGAGAGAGAAAG+AGG	0.513945	7_1:-70688136	None:intergenic
AAGTGGGAAAGCAGAGAACT+TGG	0.515899	7_1:+70689908	Msa1034960:three_prime_UTR
AGTAGTGAGGTTCGTTAGTG+TGG	0.517658	7_1:-70688046	None:intergenic
GGAGATATCTTAGAGCAAAT+GGG	0.522905	7_1:+70689834	Msa1034960:three_prime_UTR
GCACCCGCTCCATTCACTGC+CGG	0.525863	7_1:+70688273	Msa1034960:CDS
TCGAAGGGTAGCATAGGATT+GGG	0.526008	7_1:-70687998	None:intergenic
GAACCGGCAGTGAATGGAGC+GGG	0.526734	7_1:-70688276	None:intergenic
TGATTTAGGTTCGGGATCGA+AGG	0.528856	7_1:-70688014	None:intergenic
AAAAGCAGAACATCAGAAAA+GGG	0.528951	7_1:+70689740	Msa1034960:CDS
TTGAAGAAGATTTCAAGTGC+AGG	0.531126	7_1:+70689790	Msa1034960:three_prime_UTR
GTAGCAGCAGAGAATGAAGC+TGG	0.533970	7_1:-70689486	None:intergenic
GATCAGAGAAAATGTTCAGC+TGG	0.541232	7_1:-70689464	None:intergenic
CGAGCAACTTCGCGACGTAC+GGG	0.553693	7_1:-70688324	None:intergenic
CGAGGAGTGTACTTCCGTCT+TGG	0.554998	7_1:+70688424	Msa1034960:CDS
ACCACTCGCCGTGGAAGAAG+AGG	0.555978	7_1:+70688387	Msa1034960:CDS
GCCTCTTCTTCCACGGCGAG+TGG	0.556257	7_1:-70688388	None:intergenic
CATTCACTGCCGGTTCAGAT+CGG	0.557296	7_1:+70688283	Msa1034960:CDS
CTTCGCCGTTCATACTATGC+CGG	0.566266	7_1:+70688149	Msa1034960:exon
AATTCACCTCATGGACATCA+AGG	0.566381	7_1:-70689769	None:intergenic
TTAGGCGATTGAGAGAAGGA+GGG	0.570115	7_1:+70689389	Msa1034960:intron
AATAGAGTATCCACGTCAAG+AGG	0.577745	7_1:-70688195	None:intergenic
CCGCGTCATCCCTCTTGACG+TGG	0.577863	7_1:+70688185	Msa1034960:CDS
GGTTCGTATTTGTAGTAGTG+AGG	0.582283	7_1:-70688059	None:intergenic
CATCAAAGAATGATGATGCA+AGG	0.582864	7_1:-70689994	None:intergenic
TATCTTAGAGCAAATGGGAA+AGG	0.583358	7_1:+70689839	Msa1034960:three_prime_UTR
TGGAGCGGGTGCAGGTGTAA+CGG	0.585593	7_1:-70688262	None:intergenic
GAGAATGAGGAAATTCTGAG+AGG	0.593794	7_1:-70688101	None:intergenic
TGCTTCCGGCATAGTATGAA+CGG	0.594718	7_1:-70688154	None:intergenic
GAATGCAATAACTTCTTCTG+AGG	0.598545	7_1:-70689651	None:intergenic
CGGCTCAGATTCTTGAATCA+CGG	0.600207	7_1:-70688235	None:intergenic
GATTTAGGTTCGGGATCGAA+GGG	0.601661	7_1:-70688013	None:intergenic
GAGGGAGAGACAGGGAACTG+AGG	0.604365	7_1:+70689407	Msa1034960:CDS
TCGGGATCGAAGGGTAGCAT+AGG	0.609040	7_1:-70688004	None:intergenic
ATGATTTATAGGGCTTCAAG+TGG	0.611430	7_1:+70689891	Msa1034960:three_prime_UTR
AGAATGAGGAAATTCTGAGA+GGG	0.615317	7_1:-70688100	None:intergenic
ATACATTGTAATATATACAA+TGG	0.617639	7_1:-70690041	None:intergenic
CCTCCAACCACCACTCGCCG+TGG	0.618566	7_1:+70688378	Msa1034960:CDS
TACTTCCGTCTTGGTACCCG+AGG	0.623356	7_1:+70688433	Msa1034960:CDS
GGTGCAGGTGTAACGGAGAG+CGG	0.629682	7_1:-70688255	None:intergenic
GAGAGAAGGAGGGAGAGACA+GGG	0.634717	7_1:+70689399	Msa1034960:CDS
CCACGTCAAGAGGGATGACG+CGG	0.645758	7_1:-70688185	None:intergenic
ATAGAGTATCCACGTCAAGA+GGG	0.662352	7_1:-70688194	None:intergenic
TGATTTATAGGGCTTCAAGT+GGG	0.667465	7_1:+70689892	Msa1034960:three_prime_UTR
TAGCACGGCCTCTTCTTCCA+CGG	0.680838	7_1:-70688395	None:intergenic
TCACGGCGGAGAAAGGTCGT+CGG	0.682516	7_1:-70688218	None:intergenic
ATAGCAGTGATATCCTGCAA+CGG	0.687557	7_1:-70688459	None:intergenic
TGAACCGGCAGTGAATGGAG+CGG	0.694026	7_1:-70688277	None:intergenic
CGTCAAGAGGGATGACGCGG+CGG	0.719322	7_1:-70688182	None:intergenic
TTAGGACCTTGATGTCCATG+AGG	0.720116	7_1:+70689763	Msa1034960:CDS
CTCAGATTCTTGAATCACGG+CGG	0.734730	7_1:-70688232	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTCAAAAAATAACCAAAT+AGG	+	chr7_1:70687963-70687982	Msa1034960:five_prime_UTR	15.0%
!!	TATAAAATAAACTAAAAAGC+AGG	-	chr7_1:70688611-70688630	None:intergenic	15.0%
!!!	TTGAATTTGATTTCATTTTT+CGG	+	chr7_1:70688683-70688702	Msa1034960:intron	15.0%
!!!	AGAGAAAATTTTCATTATAA+CGG	+	chr7_1:70688863-70688882	Msa1034960:intron	15.0%
!!!	GAATTTGATTTAAATTGAAT+TGG	+	chr7_1:70689227-70689246	Msa1034960:intron	15.0%
!!	AAAAAATTAAAGAGAATTGA+AGG	+	chr7_1:70689813-70689832	Msa1034960:three_prime_UTR	15.0%
!!	ATACATTGTAATATATACAA+TGG	-	chr7_1:70690044-70690063	None:intergenic	15.0%
!!!	TTTTCAAAAAATAACCAAAT+AGG	+	chr7_1:70687963-70687982	Msa1034960:five_prime_UTR	15.0%
!!	TATAAAATAAACTAAAAAGC+AGG	-	chr7_1:70688611-70688630	None:intergenic	15.0%
!!!	TTGAATTTGATTTCATTTTT+CGG	+	chr7_1:70688683-70688702	Msa1034960:intron	15.0%
!!!	AGAGAAAATTTTCATTATAA+CGG	+	chr7_1:70688863-70688882	Msa1034960:intron	15.0%
!!!	GAATTTGATTTAAATTGAAT+TGG	+	chr7_1:70689227-70689246	Msa1034960:intron	15.0%
!!	AAAAAATTAAAGAGAATTGA+AGG	+	chr7_1:70689813-70689832	Msa1034960:three_prime_UTR	15.0%
!!	ATACATTGTAATATATACAA+TGG	-	chr7_1:70690044-70690063	None:intergenic	15.0%
!!	TCTCATCAAAATAGAAAAAA+CGG	+	chr7_1:70688517-70688536	Msa1034960:intron	20.0%
!!!	TTGATTTGAATTGGAAAAAA+CGG	+	chr7_1:70688932-70688951	Msa1034960:intron	20.0%
!!	TTTAAATTGAATTGGCATAA+CGG	+	chr7_1:70689235-70689254	Msa1034960:intron	20.0%
!!	ATTCTGTTAATATTGTGTTT+AGG	+	chr7_1:70689371-70689390	Msa1034960:intron	20.0%
!!	TTGATTAAGAGAAAAGAAAT+AGG	-	chr7_1:70690092-70690111	None:intergenic	20.0%
!!	TTTCTCTTAATCAAATTGTT+TGG	+	chr7_1:70690098-70690117	Msa1034960:three_prime_UTR	20.0%
!!	TCTCATCAAAATAGAAAAAA+CGG	+	chr7_1:70688517-70688536	Msa1034960:intron	20.0%
!!!	TTGATTTGAATTGGAAAAAA+CGG	+	chr7_1:70688932-70688951	Msa1034960:intron	20.0%
!!	TTTAAATTGAATTGGCATAA+CGG	+	chr7_1:70689235-70689254	Msa1034960:intron	20.0%
!!	ATTCTGTTAATATTGTGTTT+AGG	+	chr7_1:70689371-70689390	Msa1034960:intron	20.0%
!!	TTGATTAAGAGAAAAGAAAT+AGG	-	chr7_1:70690092-70690111	None:intergenic	20.0%
!!	TTTCTCTTAATCAAATTGTT+TGG	+	chr7_1:70690098-70690117	Msa1034960:three_prime_UTR	20.0%
!!	GGTTTTCAATTTTATCTAGA+AGG	+	chr7_1:70688538-70688557	Msa1034960:intron	25.0%
!	CTTAATGCTTAATTGAAAAC+CGG	+	chr7_1:70688722-70688741	Msa1034960:intron	25.0%
!	CCGAATAAAGATAAATAAAC+CGG	-	chr7_1:70688744-70688763	None:intergenic	25.0%
!	CCGGTTTATTTATCTTTATT+CGG	+	chr7_1:70688741-70688760	Msa1034960:intron	25.0%
!!	CTTTTACTTTGCTAATATTC+TGG	+	chr7_1:70688829-70688848	Msa1034960:intron	25.0%
!!!	GACTAGAATTTGATTTGAAT+TGG	+	chr7_1:70688923-70688942	Msa1034960:intron	25.0%
!!	AGAGAAATTTTTCTTCAGAA+CGG	+	chr7_1:70689162-70689181	Msa1034960:intron	25.0%
!	ATCATCTTCTGATGATTTAT+AGG	+	chr7_1:70689880-70689899	Msa1034960:three_prime_UTR	25.0%
!	TCATCTTCTGATGATTTATA+GGG	+	chr7_1:70689881-70689900	Msa1034960:three_prime_UTR	25.0%
!!	TGATGATTTTGTTGCAATTT+TGG	+	chr7_1:70690012-70690031	Msa1034960:three_prime_UTR	25.0%
!!	TTTGAAAATTTAAAATGGCG+TGG	-	chr7_1:70687951-70687970	None:intergenic	25.0%
!!	GGTTTTCAATTTTATCTAGA+AGG	+	chr7_1:70688538-70688557	Msa1034960:intron	25.0%
!	CTTAATGCTTAATTGAAAAC+CGG	+	chr7_1:70688722-70688741	Msa1034960:intron	25.0%
!	CCGAATAAAGATAAATAAAC+CGG	-	chr7_1:70688744-70688763	None:intergenic	25.0%
!	CCGGTTTATTTATCTTTATT+CGG	+	chr7_1:70688741-70688760	Msa1034960:intron	25.0%
!!	CTTTTACTTTGCTAATATTC+TGG	+	chr7_1:70688829-70688848	Msa1034960:intron	25.0%
!!!	GACTAGAATTTGATTTGAAT+TGG	+	chr7_1:70688923-70688942	Msa1034960:intron	25.0%
!!	AGAGAAATTTTTCTTCAGAA+CGG	+	chr7_1:70689162-70689181	Msa1034960:intron	25.0%
!	ATCATCTTCTGATGATTTAT+AGG	+	chr7_1:70689880-70689899	Msa1034960:three_prime_UTR	25.0%
!	TCATCTTCTGATGATTTATA+GGG	+	chr7_1:70689881-70689900	Msa1034960:three_prime_UTR	25.0%
!!	TGATGATTTTGTTGCAATTT+TGG	+	chr7_1:70690012-70690031	Msa1034960:three_prime_UTR	25.0%
!!!	TTAGGGTTTTGATTTAGGTT+CGG	-	chr7_1:70688026-70688045	None:intergenic	30.0%
	TATATGCGATGCTGAATATT+CGG	+	chr7_1:70688627-70688646	Msa1034960:intron	30.0%
!	TTTGGAACTTTACTTCCATA+AGG	-	chr7_1:70689570-70689589	None:intergenic	30.0%
!	GCAATGTCAATGATGATTTT+TGG	-	chr7_1:70689588-70689607	None:intergenic	30.0%
	TTCACGCTCAATTATATCAA+TGG	-	chr7_1:70689676-70689695	None:intergenic	30.0%
!!!	TTTCTGATGTTCTGCTTTTT+TGG	-	chr7_1:70689739-70689758	None:intergenic	30.0%
	AAAAAGCAGAACATCAGAAA+AGG	+	chr7_1:70689739-70689758	Msa1034960:CDS	30.0%
	AAAAGCAGAACATCAGAAAA+GGG	+	chr7_1:70689740-70689759	Msa1034960:CDS	30.0%
	AAGTAGAAGATTACACAAAC+TGG	-	chr7_1:70689942-70689961	None:intergenic	30.0%
!!!	TTAGGGTTTTGATTTAGGTT+CGG	-	chr7_1:70688026-70688045	None:intergenic	30.0%
	TATATGCGATGCTGAATATT+CGG	+	chr7_1:70688627-70688646	Msa1034960:intron	30.0%
!	TTTGGAACTTTACTTCCATA+AGG	-	chr7_1:70689570-70689589	None:intergenic	30.0%
!	GCAATGTCAATGATGATTTT+TGG	-	chr7_1:70689588-70689607	None:intergenic	30.0%
	TTCACGCTCAATTATATCAA+TGG	-	chr7_1:70689676-70689695	None:intergenic	30.0%
!!!	TTTCTGATGTTCTGCTTTTT+TGG	-	chr7_1:70689739-70689758	None:intergenic	30.0%
	AAAAAGCAGAACATCAGAAA+AGG	+	chr7_1:70689739-70689758	Msa1034960:CDS	30.0%
	AAAAGCAGAACATCAGAAAA+GGG	+	chr7_1:70689740-70689759	Msa1034960:CDS	30.0%
	AAGTAGAAGATTACACAAAC+TGG	-	chr7_1:70689942-70689961	None:intergenic	30.0%
!!!	TAGGGTTTTGATTTAGGTTC+GGG	-	chr7_1:70688025-70688044	None:intergenic	35.0%
!!!	TGTGGTTAGGGTTTTGATTT+AGG	-	chr7_1:70688031-70688050	None:intergenic	35.0%
	GGGTTTGAATAGAATGAAGT+AGG	-	chr7_1:70688083-70688102	None:intergenic	35.0%
!	AGAATGAGGAAATTCTGAGA+GGG	-	chr7_1:70688103-70688122	None:intergenic	35.0%
!!	AGGATTTTGGTGATTTCTTG+TGG	-	chr7_1:70689530-70689549	None:intergenic	35.0%
	ATCAAGCTGAAAACACCTTA+TGG	+	chr7_1:70689552-70689571	Msa1034960:CDS	35.0%
	GAATGCAATAACTTCTTCTG+AGG	-	chr7_1:70689654-70689673	None:intergenic	35.0%
	ATCTTCTTCAATTCACCTCA+TGG	-	chr7_1:70689781-70689800	None:intergenic	35.0%
!	TTGAAGAAGATTTCAAGTGC+AGG	+	chr7_1:70689790-70689809	Msa1034960:three_prime_UTR	35.0%
	AGGAGATATCTTAGAGCAAA+TGG	+	chr7_1:70689833-70689852	Msa1034960:three_prime_UTR	35.0%
	GGAGATATCTTAGAGCAAAT+GGG	+	chr7_1:70689834-70689853	Msa1034960:three_prime_UTR	35.0%
	TATCTTAGAGCAAATGGGAA+AGG	+	chr7_1:70689839-70689858	Msa1034960:three_prime_UTR	35.0%
	ATGATTTATAGGGCTTCAAG+TGG	+	chr7_1:70689891-70689910	Msa1034960:three_prime_UTR	35.0%
	TGATTTATAGGGCTTCAAGT+GGG	+	chr7_1:70689892-70689911	Msa1034960:three_prime_UTR	35.0%
!	CATCAAAGAATGATGATGCA+AGG	-	chr7_1:70689997-70690016	None:intergenic	35.0%
!!!	TAGGGTTTTGATTTAGGTTC+GGG	-	chr7_1:70688025-70688044	None:intergenic	35.0%
!!!	TGTGGTTAGGGTTTTGATTT+AGG	-	chr7_1:70688031-70688050	None:intergenic	35.0%
	GGGTTTGAATAGAATGAAGT+AGG	-	chr7_1:70688083-70688102	None:intergenic	35.0%
!	AGAATGAGGAAATTCTGAGA+GGG	-	chr7_1:70688103-70688122	None:intergenic	35.0%
!!	AGGATTTTGGTGATTTCTTG+TGG	-	chr7_1:70689530-70689549	None:intergenic	35.0%
	ATCAAGCTGAAAACACCTTA+TGG	+	chr7_1:70689552-70689571	Msa1034960:CDS	35.0%
	GAATGCAATAACTTCTTCTG+AGG	-	chr7_1:70689654-70689673	None:intergenic	35.0%
	ATCTTCTTCAATTCACCTCA+TGG	-	chr7_1:70689781-70689800	None:intergenic	35.0%
!	TTGAAGAAGATTTCAAGTGC+AGG	+	chr7_1:70689790-70689809	Msa1034960:three_prime_UTR	35.0%
	AGGAGATATCTTAGAGCAAA+TGG	+	chr7_1:70689833-70689852	Msa1034960:three_prime_UTR	35.0%
	GGAGATATCTTAGAGCAAAT+GGG	+	chr7_1:70689834-70689853	Msa1034960:three_prime_UTR	35.0%
	TATCTTAGAGCAAATGGGAA+AGG	+	chr7_1:70689839-70689858	Msa1034960:three_prime_UTR	35.0%
	ATGATTTATAGGGCTTCAAG+TGG	+	chr7_1:70689891-70689910	Msa1034960:three_prime_UTR	35.0%
	TGATTTATAGGGCTTCAAGT+GGG	+	chr7_1:70689892-70689911	Msa1034960:three_prime_UTR	35.0%
!	CATCAAAGAATGATGATGCA+AGG	-	chr7_1:70689997-70690016	None:intergenic	35.0%
	GGAGATGAAGAAGACCTATT+TGG	-	chr7_1:70687980-70687999	None:intergenic	40.0%
	GGTTCGTATTTGTAGTAGTG+AGG	-	chr7_1:70688062-70688081	None:intergenic	40.0%
	GAGAATGAGGAAATTCTGAG+AGG	-	chr7_1:70688104-70688123	None:intergenic	40.0%
	GAGTGAGAAACTAGAGAATG+AGG	-	chr7_1:70688117-70688136	None:intergenic	40.0%
!	ATAGAGTATCCACGTCAAGA+GGG	-	chr7_1:70688197-70688216	None:intergenic	40.0%
!	AATAGAGTATCCACGTCAAG+AGG	-	chr7_1:70688198-70688217	None:intergenic	40.0%
	ATAGCAGTGATATCCTGCAA+CGG	-	chr7_1:70688462-70688481	None:intergenic	40.0%
	ACTGAGGAAATTGAGCAAAC+TGG	+	chr7_1:70689423-70689442	Msa1034960:CDS	40.0%
	GATCAGAGAAAATGTTCAGC+TGG	-	chr7_1:70689467-70689486	None:intergenic	40.0%
!	TTCAGCTTGATGCAGGATTT+TGG	-	chr7_1:70689543-70689562	None:intergenic	40.0%
!!!	TGTTCTGCTTTTTTGGCTGT+AGG	-	chr7_1:70689732-70689751	None:intergenic	40.0%
	CAGAACATCAGAAAAGGGTT+AGG	+	chr7_1:70689745-70689764	Msa1034960:CDS	40.0%
	AATTCACCTCATGGACATCA+AGG	-	chr7_1:70689772-70689791	None:intergenic	40.0%
	AGCAAATGGGAAAGGAGATT+CGG	+	chr7_1:70689847-70689866	Msa1034960:three_prime_UTR	40.0%
	GGAGATGAAGAAGACCTATT+TGG	-	chr7_1:70687980-70687999	None:intergenic	40.0%
	GGTTCGTATTTGTAGTAGTG+AGG	-	chr7_1:70688062-70688081	None:intergenic	40.0%
	GAGAATGAGGAAATTCTGAG+AGG	-	chr7_1:70688104-70688123	None:intergenic	40.0%
	GAGTGAGAAACTAGAGAATG+AGG	-	chr7_1:70688117-70688136	None:intergenic	40.0%
!	ATAGAGTATCCACGTCAAGA+GGG	-	chr7_1:70688197-70688216	None:intergenic	40.0%
!	AATAGAGTATCCACGTCAAG+AGG	-	chr7_1:70688198-70688217	None:intergenic	40.0%
	ATAGCAGTGATATCCTGCAA+CGG	-	chr7_1:70688462-70688481	None:intergenic	40.0%
	ACTGAGGAAATTGAGCAAAC+TGG	+	chr7_1:70689423-70689442	Msa1034960:CDS	40.0%
	GATCAGAGAAAATGTTCAGC+TGG	-	chr7_1:70689467-70689486	None:intergenic	40.0%
!	TTCAGCTTGATGCAGGATTT+TGG	-	chr7_1:70689543-70689562	None:intergenic	40.0%
!!!	TGTTCTGCTTTTTTGGCTGT+AGG	-	chr7_1:70689732-70689751	None:intergenic	40.0%
	CAGAACATCAGAAAAGGGTT+AGG	+	chr7_1:70689745-70689764	Msa1034960:CDS	40.0%
	AATTCACCTCATGGACATCA+AGG	-	chr7_1:70689772-70689791	None:intergenic	40.0%
	AGCAAATGGGAAAGGAGATT+CGG	+	chr7_1:70689847-70689866	Msa1034960:three_prime_UTR	40.0%
	TCGAAGGGTAGCATAGGATT+GGG	-	chr7_1:70688001-70688020	None:intergenic	45.0%
	ATCGAAGGGTAGCATAGGAT+TGG	-	chr7_1:70688002-70688021	None:intergenic	45.0%
!	GATTTAGGTTCGGGATCGAA+GGG	-	chr7_1:70688016-70688035	None:intergenic	45.0%
!	TGATTTAGGTTCGGGATCGA+AGG	-	chr7_1:70688017-70688036	None:intergenic	45.0%
	GAGGTTCGTTAGTGTGGTTA+GGG	-	chr7_1:70688043-70688062	None:intergenic	45.0%
	TGAGGTTCGTTAGTGTGGTT+AGG	-	chr7_1:70688044-70688063	None:intergenic	45.0%
	AGTAGTGAGGTTCGTTAGTG+TGG	-	chr7_1:70688049-70688068	None:intergenic	45.0%
	TGCTTCCGGCATAGTATGAA+CGG	-	chr7_1:70688157-70688176	None:intergenic	45.0%
	CTCAGATTCTTGAATCACGG+CGG	-	chr7_1:70688235-70688254	None:intergenic	45.0%
	CGGCTCAGATTCTTGAATCA+CGG	-	chr7_1:70688238-70688257	None:intergenic	45.0%
	AGTGAAGAACCGATCTGAAC+CGG	-	chr7_1:70688295-70688314	None:intergenic	45.0%
	GTGTTTAGGCGATTGAGAGA+AGG	+	chr7_1:70689385-70689404	Msa1034960:intron	45.0%
	TTTAGGCGATTGAGAGAAGG+AGG	+	chr7_1:70689388-70689407	Msa1034960:intron	45.0%
	TTAGGCGATTGAGAGAAGGA+GGG	+	chr7_1:70689389-70689408	Msa1034960:intron	45.0%
	TTCAGCTGGTTAGCATGAAC+TGG	-	chr7_1:70689453-70689472	None:intergenic	45.0%
!	AGGTGTTTTCAGCTTGATGC+AGG	-	chr7_1:70689550-70689569	None:intergenic	45.0%
	AAACTTCCTGCTGCTGAAGA+TGG	+	chr7_1:70689609-70689628	Msa1034960:CDS	45.0%
	TTAGGACCTTGATGTCCATG+AGG	+	chr7_1:70689763-70689782	Msa1034960:CDS	45.0%
	GCAAATGGGAAAGGAGATTC+GGG	+	chr7_1:70689848-70689867	Msa1034960:three_prime_UTR	45.0%
	AAGTGGGAAAGCAGAGAACT+TGG	+	chr7_1:70689908-70689927	Msa1034960:three_prime_UTR	45.0%
	TCGAAGGGTAGCATAGGATT+GGG	-	chr7_1:70688001-70688020	None:intergenic	45.0%
	ATCGAAGGGTAGCATAGGAT+TGG	-	chr7_1:70688002-70688021	None:intergenic	45.0%
!	GATTTAGGTTCGGGATCGAA+GGG	-	chr7_1:70688016-70688035	None:intergenic	45.0%
!	TGATTTAGGTTCGGGATCGA+AGG	-	chr7_1:70688017-70688036	None:intergenic	45.0%
	GAGGTTCGTTAGTGTGGTTA+GGG	-	chr7_1:70688043-70688062	None:intergenic	45.0%
	TGAGGTTCGTTAGTGTGGTT+AGG	-	chr7_1:70688044-70688063	None:intergenic	45.0%
	AGTAGTGAGGTTCGTTAGTG+TGG	-	chr7_1:70688049-70688068	None:intergenic	45.0%
	TGCTTCCGGCATAGTATGAA+CGG	-	chr7_1:70688157-70688176	None:intergenic	45.0%
	CTCAGATTCTTGAATCACGG+CGG	-	chr7_1:70688235-70688254	None:intergenic	45.0%
	CGGCTCAGATTCTTGAATCA+CGG	-	chr7_1:70688238-70688257	None:intergenic	45.0%
	AGTGAAGAACCGATCTGAAC+CGG	-	chr7_1:70688295-70688314	None:intergenic	45.0%
	GTGTTTAGGCGATTGAGAGA+AGG	+	chr7_1:70689385-70689404	Msa1034960:intron	45.0%
	TTTAGGCGATTGAGAGAAGG+AGG	+	chr7_1:70689388-70689407	Msa1034960:intron	45.0%
	TTAGGCGATTGAGAGAAGGA+GGG	+	chr7_1:70689389-70689408	Msa1034960:intron	45.0%
	TTCAGCTGGTTAGCATGAAC+TGG	-	chr7_1:70689453-70689472	None:intergenic	45.0%
!	AGGTGTTTTCAGCTTGATGC+AGG	-	chr7_1:70689550-70689569	None:intergenic	45.0%
	AAACTTCCTGCTGCTGAAGA+TGG	+	chr7_1:70689609-70689628	Msa1034960:CDS	45.0%
	TTAGGACCTTGATGTCCATG+AGG	+	chr7_1:70689763-70689782	Msa1034960:CDS	45.0%
	GCAAATGGGAAAGGAGATTC+GGG	+	chr7_1:70689848-70689867	Msa1034960:three_prime_UTR	45.0%
	AAGTGGGAAAGCAGAGAACT+TGG	+	chr7_1:70689908-70689927	Msa1034960:three_prime_UTR	45.0%
!!!	TATTTTTTGAAAATTTAAAA+TGG	-	chr7_1:70687956-70687975	None:intergenic	5.0%
!!!	TATTTTTTGAAAATTTAAAA+TGG	-	chr7_1:70687956-70687975	None:intergenic	5.0%
	AACGGCGAAGAGAGAGAAAG+AGG	-	chr7_1:70688139-70688158	None:intergenic	50.0%
	CTTCGCCGTTCATACTATGC+CGG	+	chr7_1:70688149-70688168	Msa1034960:exon	50.0%
	TCTTGAATCACGGCGGAGAA+AGG	-	chr7_1:70688228-70688247	None:intergenic	50.0%
!!	CATTCACTGCCGGTTCAGAT+CGG	+	chr7_1:70688283-70688302	Msa1034960:CDS	50.0%
!!!	GGAGGAGTATTTTCCGAACC+TGG	-	chr7_1:70688363-70688382	None:intergenic	50.0%
	GTAGCAGCAGAGAATGAAGC+TGG	-	chr7_1:70689489-70689508	None:intergenic	50.0%
	GCTTCATTCTCTGCTGCTAC+TGG	+	chr7_1:70689489-70689508	Msa1034960:CDS	50.0%
	GATTCACCATCTTCAGCAGC+AGG	-	chr7_1:70689618-70689637	None:intergenic	50.0%
	AACGGCGAAGAGAGAGAAAG+AGG	-	chr7_1:70688139-70688158	None:intergenic	50.0%
	CTTCGCCGTTCATACTATGC+CGG	+	chr7_1:70688149-70688168	Msa1034960:exon	50.0%
	TCTTGAATCACGGCGGAGAA+AGG	-	chr7_1:70688228-70688247	None:intergenic	50.0%
!!	CATTCACTGCCGGTTCAGAT+CGG	+	chr7_1:70688283-70688302	Msa1034960:CDS	50.0%
!!!	GGAGGAGTATTTTCCGAACC+TGG	-	chr7_1:70688363-70688382	None:intergenic	50.0%
	GTAGCAGCAGAGAATGAAGC+TGG	-	chr7_1:70689489-70689508	None:intergenic	50.0%
	GCTTCATTCTCTGCTGCTAC+TGG	+	chr7_1:70689489-70689508	Msa1034960:CDS	50.0%
	GATTCACCATCTTCAGCAGC+AGG	-	chr7_1:70689618-70689637	None:intergenic	50.0%
	TCGGGATCGAAGGGTAGCAT+AGG	-	chr7_1:70688007-70688026	None:intergenic	55.0%
	TGAACCGGCAGTGAATGGAG+CGG	-	chr7_1:70688280-70688299	None:intergenic	55.0%
	CGATCTGAACCGGCAGTGAA+TGG	-	chr7_1:70688285-70688304	None:intergenic	55.0%
	ACGAGCAACTTCGCGACGTA+CGG	-	chr7_1:70688328-70688347	None:intergenic	55.0%
	TAGCACGGCCTCTTCTTCCA+CGG	-	chr7_1:70688398-70688417	None:intergenic	55.0%
!	CGAGGAGTGTACTTCCGTCT+TGG	+	chr7_1:70688424-70688443	Msa1034960:CDS	55.0%
	TACTTCCGTCTTGGTACCCG+AGG	+	chr7_1:70688433-70688452	Msa1034960:CDS	55.0%
	ATATCCTGCAACGGCGTCCT+CGG	-	chr7_1:70688453-70688472	None:intergenic	55.0%
	TGAGAGAAGGAGGGAGAGAC+AGG	+	chr7_1:70689398-70689417	Msa1034960:CDS	55.0%
	GAGAGAAGGAGGGAGAGACA+GGG	+	chr7_1:70689399-70689418	Msa1034960:CDS	55.0%
	TCGGGATCGAAGGGTAGCAT+AGG	-	chr7_1:70688007-70688026	None:intergenic	55.0%
	TGAACCGGCAGTGAATGGAG+CGG	-	chr7_1:70688280-70688299	None:intergenic	55.0%
	CGATCTGAACCGGCAGTGAA+TGG	-	chr7_1:70688285-70688304	None:intergenic	55.0%
	ACGAGCAACTTCGCGACGTA+CGG	-	chr7_1:70688328-70688347	None:intergenic	55.0%
	TAGCACGGCCTCTTCTTCCA+CGG	-	chr7_1:70688398-70688417	None:intergenic	55.0%
!	CGAGGAGTGTACTTCCGTCT+TGG	+	chr7_1:70688424-70688443	Msa1034960:CDS	55.0%
	TACTTCCGTCTTGGTACCCG+AGG	+	chr7_1:70688433-70688452	Msa1034960:CDS	55.0%
	ATATCCTGCAACGGCGTCCT+CGG	-	chr7_1:70688453-70688472	None:intergenic	55.0%
	TGAGAGAAGGAGGGAGAGAC+AGG	+	chr7_1:70689398-70689417	Msa1034960:CDS	55.0%
	GAGAGAAGGAGGGAGAGACA+GGG	+	chr7_1:70689399-70689418	Msa1034960:CDS	55.0%
	CCACGTCAAGAGGGATGACG+CGG	-	chr7_1:70688188-70688207	None:intergenic	60.0%
	TCACGGCGGAGAAAGGTCGT+CGG	-	chr7_1:70688221-70688240	None:intergenic	60.0%
!	GGTGCAGGTGTAACGGAGAG+CGG	-	chr7_1:70688258-70688277	None:intergenic	60.0%
	TGGAGCGGGTGCAGGTGTAA+CGG	-	chr7_1:70688265-70688284	None:intergenic	60.0%
	GAACCGGCAGTGAATGGAGC+GGG	-	chr7_1:70688279-70688298	None:intergenic	60.0%
	CGAGCAACTTCGCGACGTAC+GGG	-	chr7_1:70688327-70688346	None:intergenic	60.0%
	TGCGCGTCGTTCTCCAGGTT+CGG	+	chr7_1:70688347-70688366	Msa1034960:CDS	60.0%
	TCTTCTTCCACGGCGAGTGG+TGG	-	chr7_1:70688388-70688407	None:intergenic	60.0%
	ACCACTCGCCGTGGAAGAAG+AGG	+	chr7_1:70688387-70688406	Msa1034960:CDS	60.0%
	CACTCCTCGACGCAGTAGCA+CGG	-	chr7_1:70688413-70688432	None:intergenic	60.0%
	TATCCTGCAACGGCGTCCTC+GGG	-	chr7_1:70688452-70688471	None:intergenic	60.0%
	GAGGGAGAGACAGGGAACTG+AGG	+	chr7_1:70689407-70689426	Msa1034960:CDS	60.0%
	CCACGTCAAGAGGGATGACG+CGG	-	chr7_1:70688188-70688207	None:intergenic	60.0%
	TCACGGCGGAGAAAGGTCGT+CGG	-	chr7_1:70688221-70688240	None:intergenic	60.0%
!	GGTGCAGGTGTAACGGAGAG+CGG	-	chr7_1:70688258-70688277	None:intergenic	60.0%
	TGGAGCGGGTGCAGGTGTAA+CGG	-	chr7_1:70688265-70688284	None:intergenic	60.0%
	GAACCGGCAGTGAATGGAGC+GGG	-	chr7_1:70688279-70688298	None:intergenic	60.0%
	CGAGCAACTTCGCGACGTAC+GGG	-	chr7_1:70688327-70688346	None:intergenic	60.0%
	TGCGCGTCGTTCTCCAGGTT+CGG	+	chr7_1:70688347-70688366	Msa1034960:CDS	60.0%
	TCTTCTTCCACGGCGAGTGG+TGG	-	chr7_1:70688388-70688407	None:intergenic	60.0%
	ACCACTCGCCGTGGAAGAAG+AGG	+	chr7_1:70688387-70688406	Msa1034960:CDS	60.0%
	CACTCCTCGACGCAGTAGCA+CGG	-	chr7_1:70688413-70688432	None:intergenic	60.0%
	TATCCTGCAACGGCGTCCTC+GGG	-	chr7_1:70688452-70688471	None:intergenic	60.0%
	GAGGGAGAGACAGGGAACTG+AGG	+	chr7_1:70689407-70689426	Msa1034960:CDS	60.0%
	CGTCAAGAGGGATGACGCGG+CGG	-	chr7_1:70688185-70688204	None:intergenic	65.0%
	CCGCGTCATCCCTCTTGACG+TGG	+	chr7_1:70688185-70688204	Msa1034960:CDS	65.0%
	GCAGTGAATGGAGCGGGTGC+AGG	-	chr7_1:70688273-70688292	None:intergenic	65.0%
	GCACCCGCTCCATTCACTGC+CGG	+	chr7_1:70688273-70688292	Msa1034960:CDS	65.0%
	CTTCCACGGCGAGTGGTGGT+TGG	-	chr7_1:70688384-70688403	None:intergenic	65.0%
	GCCTCTTCTTCCACGGCGAG+TGG	-	chr7_1:70688391-70688410	None:intergenic	65.0%
	GGCGTCCTCGGGTACCAAGA+CGG	-	chr7_1:70688441-70688460	None:intergenic	65.0%
	CGTCAAGAGGGATGACGCGG+CGG	-	chr7_1:70688185-70688204	None:intergenic	65.0%
	CCGCGTCATCCCTCTTGACG+TGG	+	chr7_1:70688185-70688204	Msa1034960:CDS	65.0%
	GCAGTGAATGGAGCGGGTGC+AGG	-	chr7_1:70688273-70688292	None:intergenic	65.0%
	GCACCCGCTCCATTCACTGC+CGG	+	chr7_1:70688273-70688292	Msa1034960:CDS	65.0%
	CTTCCACGGCGAGTGGTGGT+TGG	-	chr7_1:70688384-70688403	None:intergenic	65.0%
	GCCTCTTCTTCCACGGCGAG+TGG	-	chr7_1:70688391-70688410	None:intergenic	65.0%
	GGCGTCCTCGGGTACCAAGA+CGG	-	chr7_1:70688441-70688460	None:intergenic	65.0%
	ACGCGGCGGTCTCGTGCTTC+CGG	-	chr7_1:70688171-70688190	None:intergenic	70.0%
	GCTCGTGCGCGTCGTTCTCC+AGG	+	chr7_1:70688342-70688361	Msa1034960:CDS	70.0%
	CCACGGCGAGTGGTGGTTGG+AGG	-	chr7_1:70688381-70688400	None:intergenic	70.0%
	CCTCCAACCACCACTCGCCG+TGG	+	chr7_1:70688378-70688397	Msa1034960:CDS	70.0%
!	GAGGCCGTGCTACTGCGTCG+AGG	+	chr7_1:70688406-70688425	Msa1034960:CDS	70.0%
	GTACCCGAGGACGCCGTTGC+AGG	+	chr7_1:70688446-70688465	Msa1034960:CDS	70.0%
	ACGCGGCGGTCTCGTGCTTC+CGG	-	chr7_1:70688171-70688190	None:intergenic	70.0%
	GCTCGTGCGCGTCGTTCTCC+AGG	+	chr7_1:70688342-70688361	Msa1034960:CDS	70.0%
	CCACGGCGAGTGGTGGTTGG+AGG	-	chr7_1:70688381-70688400	None:intergenic	70.0%
	CCTCCAACCACCACTCGCCG+TGG	+	chr7_1:70688378-70688397	Msa1034960:CDS	70.0%
!	GAGGCCGTGCTACTGCGTCG+AGG	+	chr7_1:70688406-70688425	Msa1034960:CDS	70.0%
	GTACCCGAGGACGCCGTTGC+AGG	+	chr7_1:70688446-70688465	Msa1034960:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_1	gene	70687951	70690129	70687951	ID=Msa1034960;Name=Msa1034960
chr7_1	mRNA	70687951	70690129	70687951	ID=Msa1034960-mRNA-1;Parent=Msa1034960;Name=Msa1034960-mRNA-1;_AED=0.09;_eAED=0.09;_QI=214\|1\|1\|1\|1\|1\|2\|341\|239
chr7_1	exon	70687951	70688488	70687951	ID=Msa1034960-mRNA-1:exon:16959;Parent=Msa1034960-mRNA-1
chr7_1	exon	70689393	70690129	70689393	ID=Msa1034960-mRNA-1:exon:16960;Parent=Msa1034960-mRNA-1
chr7_1	five_prime_UTR	70687951	70688164	70687951	ID=Msa1034960-mRNA-1:five_prime_utr;Parent=Msa1034960-mRNA-1
chr7_1	CDS	70688165	70688488	70688165	ID=Msa1034960-mRNA-1:cds;Parent=Msa1034960-mRNA-1
chr7_1	CDS	70689393	70689788	70689393	ID=Msa1034960-mRNA-1:cds;Parent=Msa1034960-mRNA-1
chr7_1	three_prime_UTR	70689789	70690129	70689789	ID=Msa1034960-mRNA-1:three_prime_utr;Parent=Msa1034960-mRNA-1

Gene Sequence

>Msa1034960

ATGCCGGAAGCACGAGACCGCCGCGTCATCCCTCTTGACGTGGATACTCTATTCCGACGACCTTTCTCCGCCGTGATTCAAGAATCTGAGCCGCTCTCCGTTACACCTGCACCCGCTCCATTCACTGCCGGTTCAGATCGGTTCTTCACTGAAAGAACTCCCGTACGTCGCGAAGTTGCTCGTGCGCGTCGTTCTCCAGGTTCGGAAAATACTCCTCCAACCACCACTCGCCGTGGAAGAAGAGGCCGTGCTACTGCGTCGAGGAGTGTACTTCCGTCTTGGTACCCGAGGACGCCGTTGCAGGATATCACTGCTATTGTTCGAGCGATTGAGAGAAGGAGGGAGAGACAGGGAACTGAGGAAATTGAGCAAACTGGAACACCAGTTCATGCTAACCAGCTGAACATTTTCTCTGATCCAGCTTCATTCTCTGCTGCTACTGGATCTTCTTCACGTATCCACAAGAAATCACCAAAATCCTGCATCAAGCTGAAAACACCTTATGGAAGTAAAGTTCCAAAAATCATCATTGACATTGCAAAACTTCCTGCTGCTGAAGATGGTGAATCAGAGCTTCTGACTCCTCAGAAGAAGTTATTGCATTCCATTGATATAATTGAGCGTGAAGTGAAGCAAGAGTTGATGAAACTCAAGAGAACTCCTACAGCCAAAAAAGCAGAACATCAGAAAAGGGTTAGGACCTTGATGTCCATGAGGTGA

Protein sequence

>Msa1034960

MPEARDRRVIPLDVDTLFRRPFSAVIQESEPLSVTPAPAPFTAGSDRFFTERTPVRREVARARRSPGSENTPPTTTRRGRRGRATASRSVLPSWYPRTPLQDITAIVRAIERRRERQGTEEIEQTGTPVHANQLNIFSDPASFSAATGSSSRIHKKSPKSCIKLKTPYGSKVPKIIIDIAKLPAAEDGESELLTPQKKLLHSIDIIEREVKQELMKLKRTPTAKKAEHQKRVRTLMSMR*