AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1209720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1209720 MtrunA17_Chr4g0058901 97.428 311 7 1 1 310 1 311 0.0 628
Msa1209720 MtrunA17_Chr4g0069121 36.434 258 145 9 31 285 34 275 7.02e-47 159
Msa1209720 MtrunA17_Chr5g0415341 28.467 274 166 10 14 274 10 266 6.84e-26 104
Msa1209720 MtrunA17_Chr8g0381971 27.174 276 166 10 11 274 10 262 1.60e-23 97.8
Msa1209720 MtrunA17_Chr2g0288891 27.925 265 161 10 28 279 21 268 2.17e-19 87.0
Msa1209720 MtrunA17_Chr4g0075211 24.913 289 177 10 31 304 38 301 1.09e-15 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1209720 AT5G50290.1 63.390 295 101 3 12 303 3 293 1.17e-143 407
Msa1209720 AT3G17350.1 28.315 279 190 5 30 307 30 299 7.19e-39 139
Msa1209720 AT3G17350.2 31.452 248 158 6 30 274 30 268 5.07e-38 136
Msa1209720 AT1G10380.1 29.010 293 175 11 29 306 27 301 5.95e-26 105
Msa1209720 AT1G10380.2 30.588 255 153 9 31 274 29 270 1.47e-25 103
Msa1209720 AT1G11915.1 27.431 288 178 9 1 274 1 271 5.48e-22 94.7

Find 103 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCATGGCAAATGTTTATC+AGG 0.193615 8_1:+68327178 None:intergenic
TTGCCATGCAGAAATGTTTC+TGG 0.200621 8_1:-68327166 Msa1209720:CDS
GCATACTATGCCATACTTCT+TGG 0.280548 8_1:+68326040 None:intergenic
TCGGGTGTTGGGTTCATGTA+TGG 0.280996 8_1:+68327256 None:intergenic
TGATCATTTGTGTGTAAATA+AGG 0.286721 8_1:+68325830 None:intergenic
TGATGAGTGTAGAAATTTAT+TGG 0.288606 8_1:+68327662 None:intergenic
CCTCGTTCACCTTTGTTTCA+AGG 0.290171 8_1:-68327205 Msa1209720:CDS
TCTTGCTCCCGATGATAATA+AGG 0.303286 8_1:+68326425 None:intergenic
CTGGGTGGCCACATCCGTTT+TGG 0.303374 8_1:+68327467 None:intergenic
GGACCTAGTGATTGGACTTA+TGG 0.306537 8_1:-68326944 Msa1209720:CDS
ATGCAACTATCATCATAAAC+TGG 0.307234 8_1:-68326021 Msa1209720:three_prime_UTR
ATGGAAGGTAGTGAAGAATT+TGG 0.310791 8_1:+68327600 None:intergenic
TGTAAATAAGGTTAGGGATA+TGG 0.315987 8_1:+68325842 None:intergenic
TGTGTCTTATGAAGCTATTA+AGG 0.353594 8_1:-68327038 Msa1209720:CDS
AGAACAAAGTATTCAATTTG+TGG 0.358588 8_1:-68325799 Msa1209720:three_prime_UTR
TTATAGTGTTGCACCTTTGA+AGG 0.365560 8_1:-68326972 Msa1209720:CDS
GGACTTATGGGATCCGTGTT+AGG 0.370153 8_1:-68326931 Msa1209720:CDS
CGGGTGTTGGGTTCATGTAT+GGG 0.379624 8_1:+68327257 None:intergenic
TGTGGTGCTTGTCAGGCTAC+TGG 0.380371 8_1:-68326881 Msa1209720:CDS
GACCGCGAAACCGTTGCCTT+TGG 0.382428 8_1:+68327294 None:intergenic
ATTTGTGTGTAAATAAGGTT+AGG 0.388419 8_1:+68325835 None:intergenic
TTGAAAAGTACCAAGAAGTA+TGG 0.396215 8_1:-68326050 Msa1209720:exon
GGTATGCGTAATCTATTTGT+AGG 0.399971 8_1:+68327374 None:intergenic
AGTTGTGGGTATGGTTCTGA+TGG 0.412932 8_1:-68326854 Msa1209720:CDS
TGTAGAAATTTATTGGTGTT+GGG 0.414062 8_1:+68327669 None:intergenic
GACCTAGTGATTGGACTTAT+GGG 0.418628 8_1:-68326943 Msa1209720:CDS
GTTGCACCTTTGAAGGTTGA+TGG 0.422946 8_1:-68326965 Msa1209720:CDS
ATGAGGTTGAAAATGTTTGC+AGG 0.430766 8_1:-68326396 Msa1209720:intron
AACCGTTGCCTTTGGTTCCT+AGG 0.434888 8_1:+68327302 None:intergenic
AAGAGTAGGTCACGGAAACC+TGG 0.435538 8_1:+68327448 None:intergenic
TGAAAACGTTGTCGGGTGTT+GGG 0.444054 8_1:+68327245 None:intergenic
ATGAAAACGTTGTCGGGTGT+TGG 0.445293 8_1:+68327244 None:intergenic
ACTGGTGGTAGTTGTGGGTA+TGG 0.446197 8_1:-68326863 Msa1209720:CDS
CGTGTTAGGTATTCTGTTCA+AGG 0.451485 8_1:-68326917 Msa1209720:CDS
GTGTCTTATGAAGCTATTAA+GGG 0.454558 8_1:-68327037 Msa1209720:CDS
TGTCATCCATGCTAGCATAT+AGG 0.458562 8_1:+68326084 None:intergenic
AAAGTATTCAATTTGTGGAT+AGG 0.461355 8_1:-68325794 Msa1209720:three_prime_UTR
AAGTATTCAATTTGTGGATA+GGG 0.467903 8_1:-68325793 Msa1209720:three_prime_UTR
TGCAGTGGCCTTATTATCAT+CGG 0.468684 8_1:-68326433 Msa1209720:intron
AGGCTACTGGTGGTAGTTGT+GGG 0.472568 8_1:-68326868 Msa1209720:CDS
CAGGCTACTGGTGGTAGTTG+TGG 0.481186 8_1:-68326869 Msa1209720:CDS
CTCATGTTCCACGTAACCTC+AGG 0.481711 8_1:-68327409 Msa1209720:CDS
GCAGTGGCCTTATTATCATC+GGG 0.491551 8_1:-68326432 Msa1209720:intron
ACTTCAAATTGTGACTCAGC+AGG 0.494437 8_1:-68326794 Msa1209720:intron
GTTGTGGGTATGGTTCTGAT+GGG 0.495945 8_1:-68326853 Msa1209720:CDS
AATGAGCATGAAAACGTTGT+CGG 0.501170 8_1:+68327237 None:intergenic
GTGTAGAAATTTATTGGTGT+TGG 0.502531 8_1:+68327668 None:intergenic
ATGAGCATGAAAACGTTGTC+GGG 0.504088 8_1:+68327238 None:intergenic
ATGCAGAAATGTTTCTGGTA+TGG 0.510318 8_1:-68327161 Msa1209720:CDS
AACCAAAGGCAACGGTTTCG+CGG 0.517363 8_1:-68327296 Msa1209720:CDS
TACCCATTTGCCCTCCAAAA+CGG 0.517444 8_1:-68327481 Msa1209720:CDS
GTAGAAATTTATTGGTGTTG+GGG 0.519960 8_1:+68327670 None:intergenic
TTGTCCTGCTTGGAATATGA+TGG 0.524635 8_1:-68327119 Msa1209720:CDS
AGTACTATGATTGTCCTGCT+TGG 0.525763 8_1:-68327129 Msa1209720:CDS
ACGTGCGAAACACTAGTCCT+AGG 0.526750 8_1:-68327319 Msa1209720:CDS
TTTGTGTGTAAATAAGGTTA+GGG 0.527549 8_1:+68325836 None:intergenic
ATAATATAATGATTAGATGA+TGG 0.530823 8_1:+68327581 None:intergenic
CGGGAGCAAGAAGGCCTATG+AGG 0.531175 8_1:-68326413 Msa1209720:CDS
GTGTTGTTAGAACAACTTGA+AGG 0.536835 8_1:+68327538 None:intergenic
CGTTGTTTATGCAGAAGAGT+AGG 0.539097 8_1:+68327434 None:intergenic
TGCAGAAATGTTTCTGGTAT+GGG 0.539299 8_1:-68327160 Msa1209720:CDS
CTAAGTAAGCTTGAGTGTGA+AGG 0.541978 8_1:-68327007 Msa1209720:CDS
TAGCATGGATGACAACCAAC+TGG 0.545560 8_1:-68326075 Msa1209720:CDS
GAACTGATTATTGTCAAAGT+AGG 0.551503 8_1:+68325765 None:intergenic
TCAGGGAAGCCTTGAAACAA+AGG 0.553085 8_1:+68327196 None:intergenic
TTTGCCCTCCAAAACGGATG+TGG 0.555787 8_1:-68327475 Msa1209720:CDS
AGGTTGATGGACCTAGTGAT+TGG 0.555804 8_1:-68326952 Msa1209720:CDS
CTAGGTCCATCAACCTTCAA+AGG 0.558381 8_1:+68326959 None:intergenic
TAAGTAAGCTTGAGTGTGAA+GGG 0.560178 8_1:-68327006 Msa1209720:CDS
ATTAGACAAGTTTGTATGTG+TGG 0.562572 8_1:-68326830 Msa1209720:CDS
TGGCCCATCATATTCCAAGC+AGG 0.569795 8_1:+68327115 None:intergenic
ACGGTTTCGCGGTCGAACCG+TGG 0.573603 8_1:-68327285 Msa1209720:CDS
TGCATGGCAAATGTTTATCA+GGG 0.573889 8_1:+68327179 None:intergenic
GGGTGTTGGGTTCATGTATG+GGG 0.583489 8_1:+68327258 None:intergenic
TATAATGATTAGATGATGGA+AGG 0.588486 8_1:+68327585 None:intergenic
TAGGACTCTGTAGGAACCTG+AGG 0.590231 8_1:+68327393 None:intergenic
GTGTTAGGTATTCTGTTCAA+GGG 0.592070 8_1:-68326916 Msa1209720:CDS
GTTCGTGAAGTGTTAGAGCT+TGG 0.605240 8_1:+68327353 None:intergenic
AACACATGTAGATCATATTG+TGG 0.606078 8_1:-68327520 Msa1209720:CDS
CAAAACGGATGTGGCCACCC+AGG 0.607644 8_1:-68327466 Msa1209720:CDS
TTCATGTATGGGGACCGCCA+CGG 0.609930 8_1:+68327268 None:intergenic
TGCAACTATCATCATAAACT+GGG 0.611597 8_1:-68326020 Msa1209720:three_prime_UTR
TGTCCTGCTTGGAATATGAT+GGG 0.617971 8_1:-68327118 Msa1209720:CDS
TATTATCATCGGGAGCAAGA+AGG 0.618389 8_1:-68326422 Msa1209720:CDS
CCTTGAAACAAAGGTGAACG+AGG 0.620322 8_1:+68327205 None:intergenic
AGAGTAGGTCACGGAAACCT+GGG 0.621258 8_1:+68327449 None:intergenic
TGTCTTATGAAGCTATTAAG+GGG 0.625096 8_1:-68327036 Msa1209720:CDS
GTCCTAGGAACCAAAGGCAA+CGG 0.628622 8_1:-68327304 Msa1209720:CDS
CTTGAACAGAATACCTAACA+CGG 0.629047 8_1:+68326918 None:intergenic
GTTTCGCACGTAGACATGTG+TGG 0.629216 8_1:+68327331 None:intergenic
TGTAGGAACCTGAGGTTACG+TGG 0.629711 8_1:+68327401 None:intergenic
ATAAGGTTAGGGATATGGCT+AGG 0.632415 8_1:+68325847 None:intergenic
ACACTAGTCCTAGGAACCAA+AGG 0.632752 8_1:-68327310 Msa1209720:CDS
ATCTATTTGTAGGACTCTGT+AGG 0.633162 8_1:+68327384 None:intergenic
GGTGCTTGTCAGGCTACTGG+TGG 0.639415 8_1:-68326878 Msa1209720:CDS
TGTTGTTAGAACAACTTGAA+GGG 0.642633 8_1:+68327539 None:intergenic
ATCCCATAAGTCCAATCACT+AGG 0.648619 8_1:+68326941 None:intergenic
GACACAGCACAACACTCAGG+TGG 0.652243 8_1:+68327055 None:intergenic
TTATGCAGAAGAGTAGGTCA+CGG 0.652706 8_1:+68327440 None:intergenic
TAAGACACAGCACAACACTC+AGG 0.658139 8_1:+68327052 None:intergenic
ATACCAGAAACATTTCTGCA+TGG 0.663576 8_1:+68327163 None:intergenic
GTTTCGCGGTCGAACCGTGG+CGG 0.689256 8_1:-68327282 Msa1209720:CDS
GTAGGTCACGGAAACCTGGG+TGG 0.745818 8_1:+68327452 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTGATATTATTTATCAT+CGG + chr8_1:68326911-68326930 None:intergenic 10.0%
!! ATGATAAATAATATCAATTA+CGG - chr8_1:68326911-68326930 Msa1209720:CDS 10.0%
!! TAATTGATATTATTTATCAT+CGG + chr8_1:68326911-68326930 None:intergenic 10.0%
!! ATGATAAATAATATCAATTA+CGG - chr8_1:68326911-68326930 Msa1209720:CDS 10.0%
!! ATAATATAATGATTAGATGA+TGG + chr8_1:68325886-68325905 None:intergenic 15.0%
!!! TCAAGATTCTATTAATTTTT+TGG - chr8_1:68326705-68326724 Msa1209720:intron 15.0%
!!! AAAATAACTTATTTTAGAGA+GGG + chr8_1:68326733-68326752 None:intergenic 15.0%
!!! TAAAATAACTTATTTTAGAG+AGG + chr8_1:68326734-68326753 None:intergenic 15.0%
!! AATTGATATTATTTATCATC+GGG + chr8_1:68326910-68326929 None:intergenic 15.0%
!! ATTTCATTACTTTGTTAATT+AGG - chr8_1:68327140-68327159 Msa1209720:CDS 15.0%
!!! ATTTTTCAATTTTTTTCCTA+GGG + chr8_1:68327566-68327585 None:intergenic 15.0%
!!! TATTTTTCAATTTTTTTCCT+AGG + chr8_1:68327567-68327586 None:intergenic 15.0%
!! ATAATATAATGATTAGATGA+TGG + chr8_1:68325886-68325905 None:intergenic 15.0%
!!! TCAAGATTCTATTAATTTTT+TGG - chr8_1:68326705-68326724 Msa1209720:intron 15.0%
!!! AAAATAACTTATTTTAGAGA+GGG + chr8_1:68326733-68326752 None:intergenic 15.0%
!!! TAAAATAACTTATTTTAGAG+AGG + chr8_1:68326734-68326753 None:intergenic 15.0%
!! AATTGATATTATTTATCATC+GGG + chr8_1:68326910-68326929 None:intergenic 15.0%
!! ATTTCATTACTTTGTTAATT+AGG - chr8_1:68327140-68327159 Msa1209720:CDS 15.0%
!!! ATTTTTCAATTTTTTTCCTA+GGG + chr8_1:68327566-68327585 None:intergenic 15.0%
!!! TATTTTTCAATTTTTTTCCT+AGG + chr8_1:68327567-68327586 None:intergenic 15.0%
!!! AAATAACTTATTTTAGAGAG+GGG + chr8_1:68326732-68326751 None:intergenic 20.0%
!! TCAAATTGTGAAACAATATT+TGG + chr8_1:68326836-68326855 None:intergenic 20.0%
!! ATTGTTTCACAATTTGAATT+AGG - chr8_1:68326839-68326858 Msa1209720:CDS 20.0%
!! TTGTTTCACAATTTGAATTA+GGG - chr8_1:68326840-68326859 Msa1209720:CDS 20.0%
!! ATTGATATTATTTATCATCG+GGG + chr8_1:68326909-68326928 None:intergenic 20.0%
!! TACATAACATCTTTCAATTA+AGG + chr8_1:68327228-68327247 None:intergenic 20.0%
!!! TTTCATTTGATTTGCTAAAA+TGG + chr8_1:68327304-68327323 None:intergenic 20.0%
!! TTAGCAAATCAAATGAAAAT+TGG - chr8_1:68327306-68327325 Msa1209720:CDS 20.0%
!! TAGCAAATCAAATGAAAATT+GGG - chr8_1:68327307-68327326 Msa1209720:CDS 20.0%
!!! TCATATGTAACTTTTCTTTT+TGG - chr8_1:68327344-68327363 Msa1209720:CDS 20.0%
!!! CATATGTAACTTTTCTTTTT+GGG - chr8_1:68327345-68327364 Msa1209720:CDS 20.0%
!!! AAATAACTTATTTTAGAGAG+GGG + chr8_1:68326732-68326751 None:intergenic 20.0%
!! TCAAATTGTGAAACAATATT+TGG + chr8_1:68326836-68326855 None:intergenic 20.0%
!! ATTGTTTCACAATTTGAATT+AGG - chr8_1:68326839-68326858 Msa1209720:CDS 20.0%
!! TTGTTTCACAATTTGAATTA+GGG - chr8_1:68326840-68326859 Msa1209720:CDS 20.0%
!! ATTGATATTATTTATCATCG+GGG + chr8_1:68326909-68326928 None:intergenic 20.0%
!! TACATAACATCTTTCAATTA+AGG + chr8_1:68327228-68327247 None:intergenic 20.0%
!!! TTTCATTTGATTTGCTAAAA+TGG + chr8_1:68327304-68327323 None:intergenic 20.0%
!! TTAGCAAATCAAATGAAAAT+TGG - chr8_1:68327306-68327325 Msa1209720:CDS 20.0%
!! TAGCAAATCAAATGAAAATT+GGG - chr8_1:68327307-68327326 Msa1209720:CDS 20.0%
!!! TCATATGTAACTTTTCTTTT+TGG - chr8_1:68327344-68327363 Msa1209720:CDS 20.0%
!!! CATATGTAACTTTTCTTTTT+GGG - chr8_1:68327345-68327364 Msa1209720:CDS 20.0%
!! TGTAGAAATTTATTGGTGTT+GGG + chr8_1:68325798-68325817 None:intergenic 25.0%
! TGATGAGTGTAGAAATTTAT+TGG + chr8_1:68325805-68325824 None:intergenic 25.0%
!! TGATGATATTTTGCTTGATT+TGG + chr8_1:68325833-68325852 None:intergenic 25.0%
!!! TATAATGATTAGATGATGGA+AGG + chr8_1:68325882-68325901 None:intergenic 25.0%
! ATTGTGAAACAATATTTGGT+TGG + chr8_1:68326832-68326851 None:intergenic 25.0%
! TCGAAAAAAAAAATCGTCTT+TGG - chr8_1:68326866-68326885 Msa1209720:CDS 25.0%
!! TTTTTCTGTATATTTTGCAG+TGG - chr8_1:68327016-68327035 Msa1209720:CDS 25.0%
!! TATGCTGTATATTTTCAAAG+TGG - chr8_1:68327169-68327188 Msa1209720:CDS 25.0%
! ACATCTTTCAATTAAGGAAT+AGG + chr8_1:68327222-68327241 None:intergenic 25.0%
! AGCAAATCAAATGAAAATTG+GGG - chr8_1:68327308-68327327 Msa1209720:CDS 25.0%
!!! TTTGTACATGCCTTTTTTTT+TGG - chr8_1:68327480-68327499 Msa1209720:CDS 25.0%
! TTTGTGTGTAAATAAGGTTA+GGG + chr8_1:68327631-68327650 None:intergenic 25.0%
! ATTTGTGTGTAAATAAGGTT+AGG + chr8_1:68327632-68327651 None:intergenic 25.0%
! TGATCATTTGTGTGTAAATA+AGG + chr8_1:68327637-68327656 None:intergenic 25.0%
!! AGAACAAAGTATTCAATTTG+TGG - chr8_1:68327665-68327684 Msa1209720:five_prime_UTR 25.0%
!! AAAGTATTCAATTTGTGGAT+AGG - chr8_1:68327670-68327689 Msa1209720:five_prime_UTR 25.0%
! AAGTATTCAATTTGTGGATA+GGG - chr8_1:68327671-68327690 Msa1209720:five_prime_UTR 25.0%
!! TGTAGAAATTTATTGGTGTT+GGG + chr8_1:68325798-68325817 None:intergenic 25.0%
! TGATGAGTGTAGAAATTTAT+TGG + chr8_1:68325805-68325824 None:intergenic 25.0%
!! TGATGATATTTTGCTTGATT+TGG + chr8_1:68325833-68325852 None:intergenic 25.0%
!!! TATAATGATTAGATGATGGA+AGG + chr8_1:68325882-68325901 None:intergenic 25.0%
! ATTGTGAAACAATATTTGGT+TGG + chr8_1:68326832-68326851 None:intergenic 25.0%
! TCGAAAAAAAAAATCGTCTT+TGG - chr8_1:68326866-68326885 Msa1209720:CDS 25.0%
!! TTTTTCTGTATATTTTGCAG+TGG - chr8_1:68327016-68327035 Msa1209720:CDS 25.0%
!! TATGCTGTATATTTTCAAAG+TGG - chr8_1:68327169-68327188 Msa1209720:CDS 25.0%
! ACATCTTTCAATTAAGGAAT+AGG + chr8_1:68327222-68327241 None:intergenic 25.0%
! AGCAAATCAAATGAAAATTG+GGG - chr8_1:68327308-68327327 Msa1209720:CDS 25.0%
!!! TTTGTACATGCCTTTTTTTT+TGG - chr8_1:68327480-68327499 Msa1209720:CDS 25.0%
! TTTGTGTGTAAATAAGGTTA+GGG + chr8_1:68327631-68327650 None:intergenic 25.0%
! ATTTGTGTGTAAATAAGGTT+AGG + chr8_1:68327632-68327651 None:intergenic 25.0%
! TGATCATTTGTGTGTAAATA+AGG + chr8_1:68327637-68327656 None:intergenic 25.0%
!! AGAACAAAGTATTCAATTTG+TGG - chr8_1:68327665-68327684 Msa1209720:five_prime_UTR 25.0%
!! AAAGTATTCAATTTGTGGAT+AGG - chr8_1:68327670-68327689 Msa1209720:five_prime_UTR 25.0%
! AAGTATTCAATTTGTGGATA+GGG - chr8_1:68327671-68327690 Msa1209720:five_prime_UTR 25.0%
!! GTAGAAATTTATTGGTGTTG+GGG + chr8_1:68325797-68325816 None:intergenic 30.0%
GTGTAGAAATTTATTGGTGT+TGG + chr8_1:68325799-68325818 None:intergenic 30.0%
TGTTGTTAGAACAACTTGAA+GGG + chr8_1:68325928-68325947 None:intergenic 30.0%
AACACATGTAGATCATATTG+TGG - chr8_1:68325944-68325963 Msa1209720:three_prime_UTR 30.0%
TGTGTCTTATGAAGCTATTA+AGG - chr8_1:68326426-68326445 Msa1209720:CDS 30.0%
GTGTCTTATGAAGCTATTAA+GGG - chr8_1:68326427-68326446 Msa1209720:CDS 30.0%
TGTCTTATGAAGCTATTAAG+GGG - chr8_1:68326428-68326447 Msa1209720:CDS 30.0%
ATTAGACAAGTTTGTATGTG+TGG - chr8_1:68326634-68326653 Msa1209720:intron 30.0%
AATTATCAAGTTCATTCTCC+TGG + chr8_1:68326788-68326807 None:intergenic 30.0%
CATTACTTTGTTAATTAGGC+TGG - chr8_1:68327144-68327163 Msa1209720:CDS 30.0%
! GTATATTTTCAAAGTGGCAT+TGG - chr8_1:68327175-68327194 Msa1209720:CDS 30.0%
!! TTGAAAAGTACCAAGAAGTA+TGG - chr8_1:68327414-68327433 Msa1209720:CDS 30.0%
ATGCAACTATCATCATAAAC+TGG - chr8_1:68327443-68327462 Msa1209720:CDS 30.0%
TGCAACTATCATCATAAACT+GGG - chr8_1:68327444-68327463 Msa1209720:CDS 30.0%
TGTTCTTCAGCCAAAAAAAA+AGG + chr8_1:68327493-68327512 None:intergenic 30.0%
TGTAAATAAGGTTAGGGATA+TGG + chr8_1:68327625-68327644 None:intergenic 30.0%
GAACTGATTATTGTCAAAGT+AGG + chr8_1:68327702-68327721 None:intergenic 30.0%
!! GTAGAAATTTATTGGTGTTG+GGG + chr8_1:68325797-68325816 None:intergenic 30.0%
GTGTAGAAATTTATTGGTGT+TGG + chr8_1:68325799-68325818 None:intergenic 30.0%
TGTTGTTAGAACAACTTGAA+GGG + chr8_1:68325928-68325947 None:intergenic 30.0%
AACACATGTAGATCATATTG+TGG - chr8_1:68325944-68325963 Msa1209720:three_prime_UTR 30.0%
TGTGTCTTATGAAGCTATTA+AGG - chr8_1:68326426-68326445 Msa1209720:CDS 30.0%
GTGTCTTATGAAGCTATTAA+GGG - chr8_1:68326427-68326446 Msa1209720:CDS 30.0%
TGTCTTATGAAGCTATTAAG+GGG - chr8_1:68326428-68326447 Msa1209720:CDS 30.0%
ATTAGACAAGTTTGTATGTG+TGG - chr8_1:68326634-68326653 Msa1209720:intron 30.0%
AATTATCAAGTTCATTCTCC+TGG + chr8_1:68326788-68326807 None:intergenic 30.0%
CATTACTTTGTTAATTAGGC+TGG - chr8_1:68327144-68327163 Msa1209720:CDS 30.0%
! GTATATTTTCAAAGTGGCAT+TGG - chr8_1:68327175-68327194 Msa1209720:CDS 30.0%
!! TTGAAAAGTACCAAGAAGTA+TGG - chr8_1:68327414-68327433 Msa1209720:CDS 30.0%
ATGCAACTATCATCATAAAC+TGG - chr8_1:68327443-68327462 Msa1209720:CDS 30.0%
TGCAACTATCATCATAAACT+GGG - chr8_1:68327444-68327463 Msa1209720:CDS 30.0%
TGTTCTTCAGCCAAAAAAAA+AGG + chr8_1:68327493-68327512 None:intergenic 30.0%
TGTAAATAAGGTTAGGGATA+TGG + chr8_1:68327625-68327644 None:intergenic 30.0%
GAACTGATTATTGTCAAAGT+AGG + chr8_1:68327702-68327721 None:intergenic 30.0%
!!! GTTGGGGATGATTTTTTAGT+TGG + chr8_1:68325781-68325800 None:intergenic 35.0%
ATGGAAGGTAGTGAAGAATT+TGG + chr8_1:68325867-68325886 None:intergenic 35.0%
! GTGTTGTTAGAACAACTTGA+AGG + chr8_1:68325929-68325948 None:intergenic 35.0%
ATCTATTTGTAGGACTCTGT+AGG + chr8_1:68326083-68326102 None:intergenic 35.0%
GGTATGCGTAATCTATTTGT+AGG + chr8_1:68326093-68326112 None:intergenic 35.0%
AATGAGCATGAAAACGTTGT+CGG + chr8_1:68326230-68326249 None:intergenic 35.0%
TGCATGGCAAATGTTTATCA+GGG + chr8_1:68326288-68326307 None:intergenic 35.0%
ATACCAGAAACATTTCTGCA+TGG + chr8_1:68326304-68326323 None:intergenic 35.0%
!! ATGCAGAAATGTTTCTGGTA+TGG - chr8_1:68326303-68326322 Msa1209720:intron 35.0%
!! TGCAGAAATGTTTCTGGTAT+GGG - chr8_1:68326304-68326323 Msa1209720:intron 35.0%
!! TATGATGGGCCATAAAAAGA+CGG - chr8_1:68326360-68326379 Msa1209720:intron 35.0%
TAAGTAAGCTTGAGTGTGAA+GGG - chr8_1:68326458-68326477 Msa1209720:intron 35.0%
TTATAGTGTTGCACCTTTGA+AGG - chr8_1:68326492-68326511 Msa1209720:intron 35.0%
CTTGAACAGAATACCTAACA+CGG + chr8_1:68326549-68326568 None:intergenic 35.0%
GTGTTAGGTATTCTGTTCAA+GGG - chr8_1:68326548-68326567 Msa1209720:intron 35.0%
! GCAAACATTTTCAACCTCAT+AGG + chr8_1:68327068-68327087 None:intergenic 35.0%
ATGAGGTTGAAAATGTTTGC+AGG - chr8_1:68327068-68327087 Msa1209720:CDS 35.0%
!! TGTAACTTTTCTTTTTGGGC+AGG - chr8_1:68327349-68327368 Msa1209720:CDS 35.0%
! TGGTACTTTTCAAATCCAGT+TGG + chr8_1:68327407-68327426 None:intergenic 35.0%
!!! TGTTTTGATCTGTATTCCCT+AGG - chr8_1:68327547-68327566 Msa1209720:CDS 35.0%
!!! GTTGGGGATGATTTTTTAGT+TGG + chr8_1:68325781-68325800 None:intergenic 35.0%
ATGGAAGGTAGTGAAGAATT+TGG + chr8_1:68325867-68325886 None:intergenic 35.0%
! GTGTTGTTAGAACAACTTGA+AGG + chr8_1:68325929-68325948 None:intergenic 35.0%
ATCTATTTGTAGGACTCTGT+AGG + chr8_1:68326083-68326102 None:intergenic 35.0%
GGTATGCGTAATCTATTTGT+AGG + chr8_1:68326093-68326112 None:intergenic 35.0%
AATGAGCATGAAAACGTTGT+CGG + chr8_1:68326230-68326249 None:intergenic 35.0%
TGCATGGCAAATGTTTATCA+GGG + chr8_1:68326288-68326307 None:intergenic 35.0%
ATACCAGAAACATTTCTGCA+TGG + chr8_1:68326304-68326323 None:intergenic 35.0%
!! ATGCAGAAATGTTTCTGGTA+TGG - chr8_1:68326303-68326322 Msa1209720:intron 35.0%
!! TGCAGAAATGTTTCTGGTAT+GGG - chr8_1:68326304-68326323 Msa1209720:intron 35.0%
!! TATGATGGGCCATAAAAAGA+CGG - chr8_1:68326360-68326379 Msa1209720:intron 35.0%
TAAGTAAGCTTGAGTGTGAA+GGG - chr8_1:68326458-68326477 Msa1209720:intron 35.0%
TTATAGTGTTGCACCTTTGA+AGG - chr8_1:68326492-68326511 Msa1209720:intron 35.0%
CTTGAACAGAATACCTAACA+CGG + chr8_1:68326549-68326568 None:intergenic 35.0%
GTGTTAGGTATTCTGTTCAA+GGG - chr8_1:68326548-68326567 Msa1209720:intron 35.0%
! GCAAACATTTTCAACCTCAT+AGG + chr8_1:68327068-68327087 None:intergenic 35.0%
ATGAGGTTGAAAATGTTTGC+AGG - chr8_1:68327068-68327087 Msa1209720:CDS 35.0%
!! TGTAACTTTTCTTTTTGGGC+AGG - chr8_1:68327349-68327368 Msa1209720:CDS 35.0%
! TGGTACTTTTCAAATCCAGT+TGG + chr8_1:68327407-68327426 None:intergenic 35.0%
!!! TGTTTTGATCTGTATTCCCT+AGG - chr8_1:68327547-68327566 Msa1209720:CDS 35.0%
TTATGCAGAAGAGTAGGTCA+CGG + chr8_1:68326027-68326046 None:intergenic 40.0%
CGTTGTTTATGCAGAAGAGT+AGG + chr8_1:68326033-68326052 None:intergenic 40.0%
ATGAGCATGAAAACGTTGTC+GGG + chr8_1:68326229-68326248 None:intergenic 40.0%
CTGCATGGCAAATGTTTATC+AGG + chr8_1:68326289-68326308 None:intergenic 40.0%
TTGCCATGCAGAAATGTTTC+TGG - chr8_1:68326298-68326317 Msa1209720:intron 40.0%
AGTACTATGATTGTCCTGCT+TGG - chr8_1:68326335-68326354 Msa1209720:intron 40.0%
TTGTCCTGCTTGGAATATGA+TGG - chr8_1:68326345-68326364 Msa1209720:intron 40.0%
TGTCCTGCTTGGAATATGAT+GGG - chr8_1:68326346-68326365 Msa1209720:intron 40.0%
!! ATGATGGGCCATAAAAAGAC+GGG - chr8_1:68326361-68326380 Msa1209720:intron 40.0%
! AAGAAGAGCCCGTCTTTTTA+TGG + chr8_1:68326372-68326391 None:intergenic 40.0%
!!! TCTTCTTCGTTTTTTGGGTC+TGG - chr8_1:68326385-68326404 Msa1209720:intron 40.0%
CTAAGTAAGCTTGAGTGTGA+AGG - chr8_1:68326457-68326476 Msa1209720:intron 40.0%
GACCTAGTGATTGGACTTAT+GGG - chr8_1:68326521-68326540 Msa1209720:intron 40.0%
ATCCCATAAGTCCAATCACT+AGG + chr8_1:68326526-68326545 None:intergenic 40.0%
CGTGTTAGGTATTCTGTTCA+AGG - chr8_1:68326547-68326566 Msa1209720:intron 40.0%
ACTTCAAATTGTGACTCAGC+AGG - chr8_1:68326670-68326689 Msa1209720:intron 40.0%
ATTCTCCTGGTTAAGACACA+CGG + chr8_1:68326775-68326794 None:intergenic 40.0%
!! TGCAGTGGCCTTATTATCAT+CGG - chr8_1:68327031-68327050 Msa1209720:CDS 40.0%
TCTTGCTCCCGATGATAATA+AGG + chr8_1:68327042-68327061 None:intergenic 40.0%
TATTATCATCGGGAGCAAGA+AGG - chr8_1:68327042-68327061 Msa1209720:CDS 40.0%
!! TTCTTTTTGGGCAGGACTTT+TGG - chr8_1:68327357-68327376 Msa1209720:CDS 40.0%
! TTTTGGCCTATATGCTAGCA+TGG - chr8_1:68327374-68327393 Msa1209720:CDS 40.0%
TGTCATCCATGCTAGCATAT+AGG + chr8_1:68327383-68327402 None:intergenic 40.0%
GCATACTATGCCATACTTCT+TGG + chr8_1:68327427-68327446 None:intergenic 40.0%
ATAAGGTTAGGGATATGGCT+AGG + chr8_1:68327620-68327639 None:intergenic 40.0%
TTATGCAGAAGAGTAGGTCA+CGG + chr8_1:68326027-68326046 None:intergenic 40.0%
CGTTGTTTATGCAGAAGAGT+AGG + chr8_1:68326033-68326052 None:intergenic 40.0%
ATGAGCATGAAAACGTTGTC+GGG + chr8_1:68326229-68326248 None:intergenic 40.0%
CTGCATGGCAAATGTTTATC+AGG + chr8_1:68326289-68326308 None:intergenic 40.0%
TTGCCATGCAGAAATGTTTC+TGG - chr8_1:68326298-68326317 Msa1209720:intron 40.0%
AGTACTATGATTGTCCTGCT+TGG - chr8_1:68326335-68326354 Msa1209720:intron 40.0%
TTGTCCTGCTTGGAATATGA+TGG - chr8_1:68326345-68326364 Msa1209720:intron 40.0%
TGTCCTGCTTGGAATATGAT+GGG - chr8_1:68326346-68326365 Msa1209720:intron 40.0%
!! ATGATGGGCCATAAAAAGAC+GGG - chr8_1:68326361-68326380 Msa1209720:intron 40.0%
! AAGAAGAGCCCGTCTTTTTA+TGG + chr8_1:68326372-68326391 None:intergenic 40.0%
!!! TCTTCTTCGTTTTTTGGGTC+TGG - chr8_1:68326385-68326404 Msa1209720:intron 40.0%
CTAAGTAAGCTTGAGTGTGA+AGG - chr8_1:68326457-68326476 Msa1209720:intron 40.0%
GACCTAGTGATTGGACTTAT+GGG - chr8_1:68326521-68326540 Msa1209720:intron 40.0%
ATCCCATAAGTCCAATCACT+AGG + chr8_1:68326526-68326545 None:intergenic 40.0%
CGTGTTAGGTATTCTGTTCA+AGG - chr8_1:68326547-68326566 Msa1209720:intron 40.0%
ACTTCAAATTGTGACTCAGC+AGG - chr8_1:68326670-68326689 Msa1209720:intron 40.0%
ATTCTCCTGGTTAAGACACA+CGG + chr8_1:68326775-68326794 None:intergenic 40.0%
!! TGCAGTGGCCTTATTATCAT+CGG - chr8_1:68327031-68327050 Msa1209720:CDS 40.0%
TCTTGCTCCCGATGATAATA+AGG + chr8_1:68327042-68327061 None:intergenic 40.0%
TATTATCATCGGGAGCAAGA+AGG - chr8_1:68327042-68327061 Msa1209720:CDS 40.0%
!! TTCTTTTTGGGCAGGACTTT+TGG - chr8_1:68327357-68327376 Msa1209720:CDS 40.0%
! TTTTGGCCTATATGCTAGCA+TGG - chr8_1:68327374-68327393 Msa1209720:CDS 40.0%
TGTCATCCATGCTAGCATAT+AGG + chr8_1:68327383-68327402 None:intergenic 40.0%
GCATACTATGCCATACTTCT+TGG + chr8_1:68327427-68327446 None:intergenic 40.0%
ATAAGGTTAGGGATATGGCT+AGG + chr8_1:68327620-68327639 None:intergenic 40.0%
TACCCATTTGCCCTCCAAAA+CGG - chr8_1:68325983-68326002 Msa1209720:three_prime_UTR 45.0%
!!! ATCCGTTTTGGAGGGCAAAT+GGG + chr8_1:68325988-68326007 None:intergenic 45.0%
! GTTCGTGAAGTGTTAGAGCT+TGG + chr8_1:68326114-68326133 None:intergenic 45.0%
ACACTAGTCCTAGGAACCAA+AGG - chr8_1:68326154-68326173 Msa1209720:intron 45.0%
TGAAAACGTTGTCGGGTGTT+GGG + chr8_1:68326222-68326241 None:intergenic 45.0%
ATGAAAACGTTGTCGGGTGT+TGG + chr8_1:68326223-68326242 None:intergenic 45.0%
CCTTGAAACAAAGGTGAACG+AGG + chr8_1:68326262-68326281 None:intergenic 45.0%
! CCTCGTTCACCTTTGTTTCA+AGG - chr8_1:68326259-68326278 Msa1209720:intron 45.0%
TCAGGGAAGCCTTGAAACAA+AGG + chr8_1:68326271-68326290 None:intergenic 45.0%
!!! ACGGGCTCTTCTTCGTTTTT+TGG - chr8_1:68326379-68326398 Msa1209720:intron 45.0%
!!! CGGGCTCTTCTTCGTTTTTT+GGG - chr8_1:68326380-68326399 Msa1209720:intron 45.0%
TAAGACACAGCACAACACTC+AGG + chr8_1:68326415-68326434 None:intergenic 45.0%
! GTTGCACCTTTGAAGGTTGA+TGG - chr8_1:68326499-68326518 Msa1209720:intron 45.0%
CTAGGTCCATCAACCTTCAA+AGG + chr8_1:68326508-68326527 None:intergenic 45.0%
!! AGGTTGATGGACCTAGTGAT+TGG - chr8_1:68326512-68326531 Msa1209720:intron 45.0%
GGACCTAGTGATTGGACTTA+TGG - chr8_1:68326520-68326539 Msa1209720:intron 45.0%
! CAAGGGAGTGATGAGTTTTG+TGG - chr8_1:68326565-68326584 Msa1209720:intron 45.0%
!! TGAGTTTTGTGGTGCTTGTC+AGG - chr8_1:68326576-68326595 Msa1209720:intron 45.0%
!! AGTTGTGGGTATGGTTCTGA+TGG - chr8_1:68326610-68326629 Msa1209720:intron 45.0%
!! GTTGTGGGTATGGTTCTGAT+GGG - chr8_1:68326611-68326630 Msa1209720:intron 45.0%
ATTGTCCGTGTGTCTTAACC+AGG - chr8_1:68326767-68326786 Msa1209720:intron 45.0%
!! GCAGTGGCCTTATTATCATC+GGG - chr8_1:68327032-68327051 Msa1209720:CDS 45.0%
AATAGGACACACAAGCCACT+AGG + chr8_1:68327205-68327224 None:intergenic 45.0%
TAGCATGGATGACAACCAAC+TGG - chr8_1:68327389-68327408 Msa1209720:CDS 45.0%
TACCCATTTGCCCTCCAAAA+CGG - chr8_1:68325983-68326002 Msa1209720:three_prime_UTR 45.0%
!!! ATCCGTTTTGGAGGGCAAAT+GGG + chr8_1:68325988-68326007 None:intergenic 45.0%
! GTTCGTGAAGTGTTAGAGCT+TGG + chr8_1:68326114-68326133 None:intergenic 45.0%
ACACTAGTCCTAGGAACCAA+AGG - chr8_1:68326154-68326173 Msa1209720:intron 45.0%
TGAAAACGTTGTCGGGTGTT+GGG + chr8_1:68326222-68326241 None:intergenic 45.0%
ATGAAAACGTTGTCGGGTGT+TGG + chr8_1:68326223-68326242 None:intergenic 45.0%
CCTTGAAACAAAGGTGAACG+AGG + chr8_1:68326262-68326281 None:intergenic 45.0%
! CCTCGTTCACCTTTGTTTCA+AGG - chr8_1:68326259-68326278 Msa1209720:intron 45.0%
TCAGGGAAGCCTTGAAACAA+AGG + chr8_1:68326271-68326290 None:intergenic 45.0%
!!! ACGGGCTCTTCTTCGTTTTT+TGG - chr8_1:68326379-68326398 Msa1209720:intron 45.0%
!!! CGGGCTCTTCTTCGTTTTTT+GGG - chr8_1:68326380-68326399 Msa1209720:intron 45.0%
TAAGACACAGCACAACACTC+AGG + chr8_1:68326415-68326434 None:intergenic 45.0%
! GTTGCACCTTTGAAGGTTGA+TGG - chr8_1:68326499-68326518 Msa1209720:intron 45.0%
CTAGGTCCATCAACCTTCAA+AGG + chr8_1:68326508-68326527 None:intergenic 45.0%
!! AGGTTGATGGACCTAGTGAT+TGG - chr8_1:68326512-68326531 Msa1209720:intron 45.0%
GGACCTAGTGATTGGACTTA+TGG - chr8_1:68326520-68326539 Msa1209720:intron 45.0%
! CAAGGGAGTGATGAGTTTTG+TGG - chr8_1:68326565-68326584 Msa1209720:intron 45.0%
!! TGAGTTTTGTGGTGCTTGTC+AGG - chr8_1:68326576-68326595 Msa1209720:intron 45.0%
!! AGTTGTGGGTATGGTTCTGA+TGG - chr8_1:68326610-68326629 Msa1209720:intron 45.0%
!! GTTGTGGGTATGGTTCTGAT+GGG - chr8_1:68326611-68326630 Msa1209720:intron 45.0%
ATTGTCCGTGTGTCTTAACC+AGG - chr8_1:68326767-68326786 Msa1209720:intron 45.0%
!! GCAGTGGCCTTATTATCATC+GGG - chr8_1:68327032-68327051 Msa1209720:CDS 45.0%
AATAGGACACACAAGCCACT+AGG + chr8_1:68327205-68327224 None:intergenic 45.0%
TAGCATGGATGACAACCAAC+TGG - chr8_1:68327389-68327408 Msa1209720:CDS 45.0%
!!! CATCCGTTTTGGAGGGCAAA+TGG + chr8_1:68325989-68326008 None:intergenic 50.0%
TTTGCCCTCCAAAACGGATG+TGG - chr8_1:68325989-68326008 Msa1209720:three_prime_UTR 50.0%
AGAGTAGGTCACGGAAACCT+GGG + chr8_1:68326018-68326037 None:intergenic 50.0%
AAGAGTAGGTCACGGAAACC+TGG + chr8_1:68326019-68326038 None:intergenic 50.0%
CTCATGTTCCACGTAACCTC+AGG - chr8_1:68326055-68326074 Msa1209720:exon 50.0%
TGTAGGAACCTGAGGTTACG+TGG + chr8_1:68326066-68326085 None:intergenic 50.0%
TAGGACTCTGTAGGAACCTG+AGG + chr8_1:68326074-68326093 None:intergenic 50.0%
GTTTCGCACGTAGACATGTG+TGG + chr8_1:68326136-68326155 None:intergenic 50.0%
ACGTGCGAAACACTAGTCCT+AGG - chr8_1:68326145-68326164 Msa1209720:intron 50.0%
GTCCTAGGAACCAAAGGCAA+CGG - chr8_1:68326160-68326179 Msa1209720:intron 50.0%
! AACCGTTGCCTTTGGTTCCT+AGG + chr8_1:68326165-68326184 None:intergenic 50.0%
AACCAAAGGCAACGGTTTCG+CGG - chr8_1:68326168-68326187 Msa1209720:intron 50.0%
!! GGGTGTTGGGTTCATGTATG+GGG + chr8_1:68326209-68326228 None:intergenic 50.0%
!! CGGGTGTTGGGTTCATGTAT+GGG + chr8_1:68326210-68326229 None:intergenic 50.0%
!! TCGGGTGTTGGGTTCATGTA+TGG + chr8_1:68326211-68326230 None:intergenic 50.0%
TGGCCCATCATATTCCAAGC+AGG + chr8_1:68326352-68326371 None:intergenic 50.0%
GGACTTATGGGATCCGTGTT+AGG - chr8_1:68326533-68326552 Msa1209720:intron 50.0%
AGGCTACTGGTGGTAGTTGT+GGG - chr8_1:68326596-68326615 Msa1209720:intron 50.0%
ACTGGTGGTAGTTGTGGGTA+TGG - chr8_1:68326601-68326620 Msa1209720:intron 50.0%
!! AGTGGCATTGGTGATCCTAG+TGG - chr8_1:68327187-68327206 Msa1209720:CDS 50.0%
!!! CATCCGTTTTGGAGGGCAAA+TGG + chr8_1:68325989-68326008 None:intergenic 50.0%
TTTGCCCTCCAAAACGGATG+TGG - chr8_1:68325989-68326008 Msa1209720:three_prime_UTR 50.0%
AGAGTAGGTCACGGAAACCT+GGG + chr8_1:68326018-68326037 None:intergenic 50.0%
AAGAGTAGGTCACGGAAACC+TGG + chr8_1:68326019-68326038 None:intergenic 50.0%
CTCATGTTCCACGTAACCTC+AGG - chr8_1:68326055-68326074 Msa1209720:exon 50.0%
TGTAGGAACCTGAGGTTACG+TGG + chr8_1:68326066-68326085 None:intergenic 50.0%
TAGGACTCTGTAGGAACCTG+AGG + chr8_1:68326074-68326093 None:intergenic 50.0%
GTTTCGCACGTAGACATGTG+TGG + chr8_1:68326136-68326155 None:intergenic 50.0%
ACGTGCGAAACACTAGTCCT+AGG - chr8_1:68326145-68326164 Msa1209720:intron 50.0%
GTCCTAGGAACCAAAGGCAA+CGG - chr8_1:68326160-68326179 Msa1209720:intron 50.0%
! AACCGTTGCCTTTGGTTCCT+AGG + chr8_1:68326165-68326184 None:intergenic 50.0%
AACCAAAGGCAACGGTTTCG+CGG - chr8_1:68326168-68326187 Msa1209720:intron 50.0%
!! GGGTGTTGGGTTCATGTATG+GGG + chr8_1:68326209-68326228 None:intergenic 50.0%
!! CGGGTGTTGGGTTCATGTAT+GGG + chr8_1:68326210-68326229 None:intergenic 50.0%
!! TCGGGTGTTGGGTTCATGTA+TGG + chr8_1:68326211-68326230 None:intergenic 50.0%
TGGCCCATCATATTCCAAGC+AGG + chr8_1:68326352-68326371 None:intergenic 50.0%
GGACTTATGGGATCCGTGTT+AGG - chr8_1:68326533-68326552 Msa1209720:intron 50.0%
AGGCTACTGGTGGTAGTTGT+GGG - chr8_1:68326596-68326615 Msa1209720:intron 50.0%
ACTGGTGGTAGTTGTGGGTA+TGG - chr8_1:68326601-68326620 Msa1209720:intron 50.0%
!! AGTGGCATTGGTGATCCTAG+TGG - chr8_1:68327187-68327206 Msa1209720:CDS 50.0%
!! GTGGCCACATCCGTTTTGGA+GGG + chr8_1:68325996-68326015 None:intergenic 55.0%
TTCATGTATGGGGACCGCCA+CGG + chr8_1:68326199-68326218 None:intergenic 55.0%
GACACAGCACAACACTCAGG+TGG + chr8_1:68326412-68326431 None:intergenic 55.0%
TGTGGTGCTTGTCAGGCTAC+TGG - chr8_1:68326583-68326602 Msa1209720:intron 55.0%
CAGGCTACTGGTGGTAGTTG+TGG - chr8_1:68326595-68326614 Msa1209720:intron 55.0%
!! GTGGCCACATCCGTTTTGGA+GGG + chr8_1:68325996-68326015 None:intergenic 55.0%
TTCATGTATGGGGACCGCCA+CGG + chr8_1:68326199-68326218 None:intergenic 55.0%
GACACAGCACAACACTCAGG+TGG + chr8_1:68326412-68326431 None:intergenic 55.0%
TGTGGTGCTTGTCAGGCTAC+TGG - chr8_1:68326583-68326602 Msa1209720:intron 55.0%
CAGGCTACTGGTGGTAGTTG+TGG - chr8_1:68326595-68326614 Msa1209720:intron 55.0%
! GGTGGCCACATCCGTTTTGG+AGG + chr8_1:68325997-68326016 None:intergenic 60.0%
! CTGGGTGGCCACATCCGTTT+TGG + chr8_1:68326000-68326019 None:intergenic 60.0%
CAAAACGGATGTGGCCACCC+AGG - chr8_1:68325998-68326017 Msa1209720:three_prime_UTR 60.0%
GTAGGTCACGGAAACCTGGG+TGG + chr8_1:68326015-68326034 None:intergenic 60.0%
GACCGCGAAACCGTTGCCTT+TGG + chr8_1:68326173-68326192 None:intergenic 60.0%
GGTGCTTGTCAGGCTACTGG+TGG - chr8_1:68326586-68326605 Msa1209720:intron 60.0%
CGGGAGCAAGAAGGCCTATG+AGG - chr8_1:68327051-68327070 Msa1209720:CDS 60.0%
! GGTGGCCACATCCGTTTTGG+AGG + chr8_1:68325997-68326016 None:intergenic 60.0%
! CTGGGTGGCCACATCCGTTT+TGG + chr8_1:68326000-68326019 None:intergenic 60.0%
CAAAACGGATGTGGCCACCC+AGG - chr8_1:68325998-68326017 Msa1209720:three_prime_UTR 60.0%
GTAGGTCACGGAAACCTGGG+TGG + chr8_1:68326015-68326034 None:intergenic 60.0%
GACCGCGAAACCGTTGCCTT+TGG + chr8_1:68326173-68326192 None:intergenic 60.0%
GGTGCTTGTCAGGCTACTGG+TGG - chr8_1:68326586-68326605 Msa1209720:intron 60.0%
CGGGAGCAAGAAGGCCTATG+AGG - chr8_1:68327051-68327070 Msa1209720:CDS 60.0%
ACGGTTTCGCGGTCGAACCG+TGG - chr8_1:68326179-68326198 Msa1209720:intron 65.0%
GTTTCGCGGTCGAACCGTGG+CGG - chr8_1:68326182-68326201 Msa1209720:intron 65.0%
ACGGTTTCGCGGTCGAACCG+TGG - chr8_1:68326179-68326198 Msa1209720:intron 65.0%
GTTTCGCGGTCGAACCGTGG+CGG - chr8_1:68326182-68326201 Msa1209720:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 68325762 68327724 68325762 ID=Msa1209720;Name=Msa1209720
chr8_1 mRNA 68325762 68327724 68325762 ID=Msa1209720-mRNA-1;Parent=Msa1209720;Name=Msa1209720-mRNA-1;_AED=0.00;_eAED=0.00;_QI=98|1|1|1|1|1|3|307|310
chr8_1 exon 68325762 68326115 68325762 ID=Msa1209720-mRNA-1:exon:22699;Parent=Msa1209720-mRNA-1
chr8_1 exon 68326397 68326450 68326397 ID=Msa1209720-mRNA-1:exon:22698;Parent=Msa1209720-mRNA-1
chr8_1 exon 68326795 68327724 68326795 ID=Msa1209720-mRNA-1:exon:22697;Parent=Msa1209720-mRNA-1
chr8_1 five_prime_UTR 68327627 68327724 68327627 ID=Msa1209720-mRNA-1:five_prime_utr;Parent=Msa1209720-mRNA-1
chr8_1 CDS 68326795 68327626 68326795 ID=Msa1209720-mRNA-1:cds;Parent=Msa1209720-mRNA-1
chr8_1 CDS 68326397 68326450 68326397 ID=Msa1209720-mRNA-1:cds;Parent=Msa1209720-mRNA-1
chr8_1 CDS 68326069 68326115 68326069 ID=Msa1209720-mRNA-1:cds;Parent=Msa1209720-mRNA-1
chr8_1 three_prime_UTR 68325762 68326068 68325762 ID=Msa1209720-mRNA-1:three_prime_utr;Parent=Msa1209720-mRNA-1
Gene Sequence

>Msa1209720

ATGTCCAAATTCTTCACTACCTTCCATCATCTAATCATTATATTATCAATAGCATATCTAATCATCCCTTCAAGTTGTTCTAACAACACATGTAGATCATATTGTGGAAACATCACAATAGATTACCCATTTGCCCTCCAAAACGGATGTGGCCACCCAGGTTTCCGTGACCTACTCTTCTGCATAAACAACGTTCTCATGTTCCACGTAACCTCAGGTTCCTACAGAGTCCTACAAATAGATTACGCATACCAAGCTCTAACACTTCACGAACCACACATGTCTACGTGCGAAACACTAGTCCTAGGAACCAAAGGCAACGGTTTCGCGGTCGAACCGTGGCGGTCCCCATACATGAACCCAACACCCGACAACGTTTTCATGCTCATTTCTTGTTCACCTCGTTCACCTTTGTTTCAAGGCTTCCCTGATAAACATTTGCCATGCAGAAATGTTTCTGGTATGGGATGTGAAGAGTACTATGATTGTCCTGCTTGGAATATGATGGGCCATAAAAAGACGGGCTCTTCTTCGTTTTTTGGGTCTGGTCCACCTGAGTGTTGTGCTGTGTCTTATGAAGCTATTAAGGGGATTAATCTAAGTAAGCTTGAGTGTGAAGGGTATAGTAGTGCTTATAGTGTTGCACCTTTGAAGGTTGATGGACCTAGTGATTGGACTTATGGGATCCGTGTTAGGTATTCTGTTCAAGGGAGTGATGAGTTTTGTGGTGCTTGTCAGGCTACTGGTGGTAGTTGTGGGTATGGTTCTGATGGGATTAGACAAGTTTGTATGTGTGGAAACTTTAATTCAACTTCAAATTGTGACTCAGCAGTGGCCTTATTATCATCGGGAGCAAGAAGGCCTATGAGGTTGAAAATGTTTGCAGGACTTTTGGCCTATATGCTAGCATGGATGACAACCAACTGGATTTGA
Protein sequence

>Msa1209720

MSKFFTTFHHLIIILSIAYLIIPSSCSNNTCRSYCGNITIDYPFALQNGCGHPGFRDLLFCINNVLMFHVTSGSYRVLQIDYAYQALTLHEPHMSTCETLVLGTKGNGFAVEPWRSPYMNPTPDNVFMLISCSPRSPLFQGFPDKHLPCRNVSGMGCEEYYDCPAWNMMGHKKTGSSSFFGSGPPECCAVSYEAIKGINLSKLECEGYSSAYSVAPLKVDGPSDWTYGIRVRYSVQGSDEFCGACQATGGSCGYGSDGIRQVCMCGNFNSTSNCDSAVALLSSGARRPMRLKMFAGLLAYMLAWMTTNWI*